Query 003999
Match_columns 780
No_of_seqs 498 out of 3209
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 15:45:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003999.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003999hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 1E-183 3E-188 1626.6 81.7 780 1-780 1-789 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 2E-154 5E-159 1365.8 75.2 672 58-770 93-781 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 1E-145 3E-150 1301.2 76.0 672 56-769 8-690 (797)
4 PRK14501 putative bifunctional 100.0 2E-135 5E-140 1215.9 76.0 667 59-772 1-672 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 7E-128 2E-132 1114.1 56.3 667 58-770 2-670 (732)
6 PRK10117 trehalose-6-phosphate 100.0 5E-121 1E-125 1015.5 48.5 456 58-549 1-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 1E-119 3E-124 1015.1 49.6 462 64-546 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 3E-120 7E-125 1023.1 32.8 467 60-546 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 2E-114 5E-119 956.5 45.7 466 55-547 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 7E-108 1E-112 926.1 50.6 454 60-545 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 3.3E-98 7E-103 852.5 50.9 459 60-544 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 3E-34 6.5E-39 342.3 45.3 525 200-778 312-977 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 8.5E-30 1.8E-34 265.4 18.0 191 578-773 5-198 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 5.8E-30 1.3E-34 267.2 13.4 185 595-780 1-192 (235)
15 PLN02580 trehalose-phosphatase 99.9 1.2E-25 2.7E-30 245.4 20.7 189 584-780 112-328 (384)
16 TIGR00685 T6PP trehalose-phosp 99.9 1.9E-25 4.1E-30 234.4 19.6 186 589-780 1-191 (244)
17 cd03792 GT1_Trehalose_phosphor 99.9 7.5E-25 1.6E-29 243.6 25.2 301 174-546 63-371 (372)
18 PLN02151 trehalose-phosphatase 99.9 3E-25 6.4E-30 239.6 21.0 187 587-780 94-296 (354)
19 PLN02939 transferase, transfer 99.9 1.9E-23 4.1E-28 246.7 33.1 319 177-549 590-969 (977)
20 PLN03017 trehalose-phosphatase 99.9 1.1E-24 2.4E-29 235.8 20.9 188 585-780 105-310 (366)
21 PRK00654 glgA glycogen synthas 99.9 9.2E-24 2E-28 242.2 29.2 294 199-547 119-463 (466)
22 PRK15484 lipopolysaccharide 1, 99.9 2.7E-23 5.9E-28 232.2 31.8 269 199-546 100-377 (380)
23 PLN02316 synthase/transferase 99.9 3.7E-23 8E-28 248.4 33.0 308 176-547 688-1034(1036)
24 TIGR02472 sucr_P_syn_N sucrose 99.9 2.8E-23 6.1E-28 236.4 28.4 297 199-544 115-438 (439)
25 PRK14098 glycogen synthase; Pr 99.9 4.3E-23 9.4E-28 237.2 29.4 320 175-547 119-486 (489)
26 TIGR02095 glgA glycogen/starch 99.9 1.4E-22 3E-27 233.0 29.4 292 199-545 129-471 (473)
27 PRK14099 glycogen synthase; Pr 99.9 1.8E-22 4E-27 231.8 30.2 294 200-549 135-481 (485)
28 TIGR03449 mycothiol_MshA UDP-N 99.9 5.5E-22 1.2E-26 222.8 32.9 287 199-547 102-402 (405)
29 cd03818 GT1_ExpC_like This fam 99.9 3.7E-22 8E-27 224.1 26.6 288 194-541 85-395 (396)
30 PRK15427 colanic acid biosynth 99.9 8.6E-22 1.9E-26 222.0 29.4 274 199-545 119-404 (406)
31 PRK10187 trehalose-6-phosphate 99.9 1.9E-22 4.2E-27 214.0 21.1 180 591-780 14-198 (266)
32 cd03796 GT1_PIG-A_like This fa 99.9 1.4E-21 3E-26 219.6 28.7 280 194-549 86-370 (398)
33 TIGR02470 sucr_synth sucrose s 99.9 5.1E-21 1.1E-25 225.5 33.5 337 175-544 362-745 (784)
34 PLN02871 UDP-sulfoquinovose:DA 99.9 1.5E-21 3.3E-26 223.9 28.5 284 192-551 140-439 (465)
35 cd03791 GT1_Glycogen_synthase_ 99.9 1.9E-21 4.1E-26 223.5 28.4 310 178-544 110-474 (476)
36 TIGR02149 glgA_Coryne glycogen 99.9 6.8E-21 1.5E-25 212.2 30.5 286 198-547 83-387 (388)
37 PLN00142 sucrose synthase 99.9 8.4E-21 1.8E-25 223.6 30.7 330 174-544 384-768 (815)
38 cd03800 GT1_Sucrose_synthase T 99.9 1.6E-20 3.4E-25 209.1 30.1 284 200-541 103-397 (398)
39 cd03813 GT1_like_3 This family 99.9 7.5E-21 1.6E-25 218.7 26.5 299 172-542 149-472 (475)
40 TIGR03088 stp2 sugar transfera 99.9 2.1E-20 4.6E-25 207.7 29.2 286 192-546 77-372 (374)
41 cd04951 GT1_WbdM_like This fam 99.9 4.1E-20 9E-25 202.4 28.7 280 190-544 73-358 (360)
42 cd05844 GT1_like_7 Glycosyltra 99.9 6.1E-20 1.3E-24 202.5 28.6 274 191-541 77-365 (367)
43 cd03806 GT1_ALG11_like This fa 99.9 8.2E-20 1.8E-24 206.8 26.9 274 195-535 106-415 (419)
44 cd04962 GT1_like_5 This family 99.9 2.9E-19 6.3E-24 197.3 30.4 285 185-545 74-369 (371)
45 cd03819 GT1_WavL_like This fam 99.9 1.3E-19 2.8E-24 198.5 27.2 268 193-531 75-349 (355)
46 cd03812 GT1_CapH_like This fam 99.8 1.9E-19 4.2E-24 197.4 26.3 257 192-519 76-338 (358)
47 PRK15490 Vi polysaccharide bio 99.8 3.3E-19 7E-24 202.0 28.0 289 191-546 275-575 (578)
48 PRK10307 putative glycosyl tra 99.8 9.7E-19 2.1E-23 197.4 31.1 282 199-547 107-408 (412)
49 cd03793 GT1_Glycogen_synthase_ 99.8 9.8E-19 2.1E-23 198.1 30.8 347 151-546 105-586 (590)
50 cd03822 GT1_ecORF704_like This 99.8 6.4E-19 1.4E-23 192.5 28.0 283 192-544 72-365 (366)
51 cd03805 GT1_ALG2_like This fam 99.8 6.6E-19 1.4E-23 196.5 28.4 281 198-539 94-391 (392)
52 PRK15179 Vi polysaccharide bio 99.8 2.8E-19 6.2E-24 210.9 26.1 280 193-542 397-689 (694)
53 cd03809 GT1_mtfB_like This fam 99.8 2.7E-19 5.8E-24 195.4 24.2 273 199-541 86-364 (365)
54 PLN02949 transferase, transfer 99.8 9.1E-19 2E-23 199.7 29.4 314 148-547 108-457 (463)
55 cd04946 GT1_AmsK_like This fam 99.8 4.2E-18 9.2E-23 192.1 30.7 272 196-541 125-406 (407)
56 cd03807 GT1_WbnK_like This fam 99.8 2.6E-18 5.6E-23 186.3 27.8 281 193-543 77-363 (365)
57 cd03799 GT1_amsK_like This is 99.8 3.7E-18 8E-23 186.6 29.1 264 199-538 80-353 (355)
58 cd03821 GT1_Bme6_like This fam 99.8 2.5E-18 5.5E-23 187.1 27.5 274 199-541 88-374 (375)
59 TIGR02918 accessory Sec system 99.8 4.1E-18 8.9E-23 196.1 30.3 271 198-545 211-498 (500)
60 cd03801 GT1_YqgM_like This fam 99.8 4E-18 8.7E-23 183.9 28.2 283 191-544 80-373 (374)
61 cd03817 GT1_UGDG_like This fam 99.8 3.6E-18 7.8E-23 186.1 27.3 267 192-532 80-362 (374)
62 PRK10125 putative glycosyl tra 99.8 8.5E-19 1.8E-23 197.4 22.8 187 297-545 212-403 (405)
63 cd03794 GT1_wbuB_like This fam 99.8 4.3E-18 9.4E-23 185.9 27.8 275 199-540 100-393 (394)
64 cd03814 GT1_like_2 This family 99.8 4.7E-18 1E-22 185.3 26.8 274 193-544 80-363 (364)
65 cd03798 GT1_wlbH_like This fam 99.8 5.5E-18 1.2E-22 183.7 26.7 277 199-545 94-375 (377)
66 PHA01633 putative glycosyl tra 99.8 8.2E-19 1.8E-23 190.7 19.5 194 302-541 118-334 (335)
67 cd04949 GT1_gtfA_like This fam 99.8 2.8E-18 6E-23 190.4 23.8 264 198-538 99-370 (372)
68 TIGR01484 HAD-SF-IIB HAD-super 99.8 3.3E-19 7.1E-24 181.8 14.7 177 593-777 1-183 (204)
69 cd03820 GT1_amsD_like This fam 99.8 1E-17 2.2E-22 180.1 24.3 260 199-541 84-347 (348)
70 cd03823 GT1_ExpE7_like This fa 99.8 3E-17 6.5E-22 178.3 27.8 262 190-542 90-355 (359)
71 PLN02501 digalactosyldiacylgly 99.8 3.6E-18 7.8E-23 195.2 20.9 261 200-544 436-707 (794)
72 PLN02846 digalactosyldiacylgly 99.8 9.5E-18 2.1E-22 189.3 22.7 268 191-545 111-390 (462)
73 PRK09922 UDP-D-galactose:(gluc 99.8 1.4E-17 3E-22 184.6 23.8 240 190-514 78-326 (359)
74 cd03808 GT1_cap1E_like This fa 99.8 3.3E-17 7.2E-22 176.9 25.2 277 192-541 76-358 (359)
75 cd03816 GT1_ALG1_like This fam 99.8 6E-17 1.3E-21 183.3 26.2 272 199-541 96-408 (415)
76 TIGR03087 stp1 sugar transfera 99.8 2.9E-16 6.2E-21 176.5 31.3 264 199-544 105-394 (397)
77 PHA01630 putative group 1 glyc 99.8 3.8E-17 8.3E-22 179.0 23.1 234 222-545 69-329 (331)
78 cd03795 GT1_like_4 This family 99.8 1.2E-16 2.6E-21 174.8 24.5 259 199-530 84-349 (357)
79 cd03802 GT1_AviGT4_like This f 99.7 2.3E-16 5.1E-21 171.3 25.0 245 192-542 83-332 (335)
80 cd03804 GT1_wbaZ_like This fam 99.7 3E-16 6.4E-21 172.8 24.6 246 198-539 83-349 (351)
81 cd03811 GT1_WabH_like This fam 99.7 3E-16 6.5E-21 168.7 23.1 248 194-513 79-333 (353)
82 cd04955 GT1_like_6 This family 99.7 9.2E-16 2E-20 168.4 25.3 265 200-544 86-362 (363)
83 cd03825 GT1_wcfI_like This fam 99.7 8.1E-16 1.8E-20 168.8 24.7 194 297-545 159-363 (365)
84 COG0561 Cof Predicted hydrolas 99.7 2.6E-16 5.6E-21 167.1 17.6 177 590-776 2-208 (264)
85 PRK05749 3-deoxy-D-manno-octul 99.7 2.4E-15 5.2E-20 170.6 25.9 287 188-546 116-419 (425)
86 PLN02275 transferase, transfer 99.7 3E-15 6.5E-20 166.9 25.1 236 200-510 102-371 (371)
87 COG0297 GlgA Glycogen synthase 99.7 5.8E-15 1.3E-19 167.0 27.0 295 199-547 131-478 (487)
88 PRK15126 thiamin pyrimidine py 99.7 1.1E-15 2.5E-20 162.9 17.8 177 591-777 2-208 (272)
89 TIGR01485 SPP_plant-cyano sucr 99.7 7.1E-16 1.5E-20 162.5 14.0 176 591-777 1-187 (249)
90 PRK10976 putative hydrolase; P 99.7 1.2E-15 2.6E-20 162.2 15.7 177 591-777 2-210 (266)
91 PRK10513 sugar phosphate phosp 99.6 4.9E-15 1.1E-19 157.7 18.4 175 591-776 3-215 (270)
92 PTZ00174 phosphomannomutase; P 99.6 8.6E-15 1.9E-19 154.1 19.3 175 590-768 4-199 (247)
93 PRK03669 mannosyl-3-phosphogly 99.6 6.4E-15 1.4E-19 157.2 18.4 183 590-780 6-214 (271)
94 PRK01158 phosphoglycolate phos 99.6 6.3E-15 1.4E-19 153.0 16.2 167 591-777 3-177 (230)
95 PF08282 Hydrolase_3: haloacid 99.6 1E-14 2.3E-19 151.9 17.1 175 594-777 1-206 (254)
96 PF00534 Glycos_transf_1: Glyc 99.6 6.4E-15 1.4E-19 145.3 14.0 143 332-513 13-159 (172)
97 TIGR00099 Cof-subfamily Cof su 99.6 1.6E-14 3.4E-19 152.8 17.1 175 593-777 1-208 (256)
98 TIGR02463 MPGP_rel mannosyl-3- 99.6 1.5E-14 3.3E-19 149.4 15.7 181 593-780 1-203 (221)
99 PRK10530 pyridoxal phosphate ( 99.6 3E-14 6.5E-19 151.7 16.5 177 591-777 3-219 (272)
100 PLN02423 phosphomannomutase 99.6 6.2E-14 1.3E-18 147.3 18.1 168 591-766 7-198 (245)
101 TIGR01487 SPP-like sucrose-pho 99.6 6.7E-14 1.5E-18 144.0 16.6 165 592-777 2-167 (215)
102 PLN02887 hydrolase family prot 99.6 8.1E-14 1.8E-18 161.4 18.6 179 588-777 305-527 (580)
103 TIGR01482 SPP-subfamily Sucros 99.5 9.1E-14 2E-18 143.7 15.9 165 594-777 1-169 (225)
104 TIGR01486 HAD-SF-IIB-MPGP mann 99.5 2.4E-13 5.1E-18 143.9 17.3 173 593-776 1-197 (256)
105 cd04950 GT1_like_1 Glycosyltra 99.5 2E-12 4.3E-17 144.4 24.3 267 195-546 99-371 (373)
106 TIGR02471 sucr_syn_bact_C sucr 99.5 1.8E-13 3.9E-18 143.0 14.8 167 593-777 1-179 (236)
107 PRK14502 bifunctional mannosyl 99.5 8.7E-13 1.9E-17 152.3 19.1 186 582-776 404-632 (694)
108 KOG1111 N-acetylglucosaminyltr 99.5 2E-13 4.4E-18 143.8 12.2 221 221-512 113-335 (426)
109 PRK00192 mannosyl-3-phosphogly 99.5 1.7E-12 3.7E-17 138.7 17.7 178 591-777 4-211 (273)
110 PRK12702 mannosyl-3-phosphogly 99.4 1.6E-12 3.5E-17 136.6 16.1 164 591-772 1-223 (302)
111 PLN02382 probable sucrose-phos 99.4 2.4E-12 5.2E-17 144.8 15.3 178 587-776 5-197 (413)
112 PLN02605 monogalactosyldiacylg 99.4 6.9E-11 1.5E-15 132.5 27.0 190 298-541 174-376 (382)
113 TIGR02461 osmo_MPG_phos mannos 99.4 6.7E-12 1.5E-16 130.2 16.3 179 593-780 1-207 (225)
114 PF05116 S6PP: Sucrose-6F-phos 99.4 7.3E-13 1.6E-17 139.3 7.0 173 591-776 2-184 (247)
115 PRK13609 diacylglycerol glucos 99.2 2E-09 4.3E-14 120.4 26.7 271 183-547 91-372 (380)
116 KOG0853 Glycosyltransferase [C 99.2 5.4E-10 1.2E-14 125.3 21.5 185 334-549 273-466 (495)
117 COG0438 RfaG Glycosyltransfera 99.2 3.6E-10 7.8E-15 120.2 19.4 197 298-546 173-376 (381)
118 cd01635 Glycosyltransferase_GT 99.2 2.4E-10 5.1E-15 116.0 15.8 111 339-488 109-220 (229)
119 PRK00726 murG undecaprenyldiph 99.2 8.6E-10 1.9E-14 122.1 21.4 257 189-544 84-355 (357)
120 cd03785 GT1_MurG MurG is an N- 99.2 3.7E-09 8E-14 116.3 23.5 246 189-533 82-344 (350)
121 TIGR00236 wecB UDP-N-acetylglu 99.2 3.4E-09 7.4E-14 117.9 23.3 251 186-513 77-335 (365)
122 TIGR01133 murG undecaprenyldip 99.1 3.9E-09 8.5E-14 116.0 20.6 180 300-538 153-346 (348)
123 cd03786 GT1_UDP-GlcNAc_2-Epime 99.1 7.3E-09 1.6E-13 114.6 21.9 250 184-514 77-339 (363)
124 PRK13608 diacylglycerol glucos 99.1 1.1E-08 2.5E-13 114.9 23.6 271 188-551 96-376 (391)
125 TIGR02094 more_P_ylases alpha- 99.1 4.7E-08 1E-12 114.7 27.8 182 332-543 387-597 (601)
126 COG3769 Predicted hydrolase (H 98.9 2.8E-08 6.1E-13 98.7 14.7 166 590-771 6-205 (274)
127 PF13692 Glyco_trans_1_4: Glyc 98.9 7.2E-09 1.6E-13 97.8 8.9 128 334-511 2-134 (135)
128 PRK00025 lpxB lipid-A-disaccha 98.9 1.3E-07 2.8E-12 105.6 20.4 141 326-514 175-343 (380)
129 PF05693 Glycogen_syn: Glycoge 98.8 1.3E-06 2.9E-11 99.7 25.0 344 151-543 100-578 (633)
130 PRK09814 beta-1,6-galactofuran 98.8 5E-07 1.1E-11 99.4 21.0 239 191-530 58-315 (333)
131 KOG1387 Glycosyltransferase [C 98.7 3.9E-07 8.4E-12 96.3 17.2 182 333-546 268-458 (465)
132 TIGR03713 acc_sec_asp1 accesso 98.7 2E-06 4.3E-11 99.8 22.4 255 180-514 203-490 (519)
133 cd04299 GT1_Glycogen_Phosphory 98.6 4E-06 8.7E-11 100.5 23.6 182 334-546 478-689 (778)
134 KOG3189 Phosphomannomutase [Li 98.6 5.5E-07 1.2E-11 88.1 11.6 179 585-768 5-204 (252)
135 smart00775 LNS2 LNS2 domain. T 98.4 4.1E-07 8.8E-12 89.1 6.9 71 593-664 1-89 (157)
136 TIGR00215 lpxB lipid-A-disacch 98.4 3.9E-05 8.4E-10 86.3 22.8 140 327-513 181-348 (385)
137 COG1519 KdtA 3-deoxy-D-manno-o 98.3 0.00023 5.1E-09 78.5 25.9 302 181-531 32-404 (419)
138 PF03332 PMM: Eukaryotic phosp 98.2 3.7E-06 8E-11 85.1 7.5 151 616-768 1-173 (220)
139 PF13524 Glyco_trans_1_2: Glyc 98.2 6.3E-06 1.4E-10 72.8 7.8 87 433-541 1-91 (92)
140 TIGR02919 accessory Sec system 98.0 7.9E-05 1.7E-09 84.7 14.7 131 331-514 281-413 (438)
141 TIGR01689 EcbF-BcbF capsule bi 97.9 1.2E-05 2.7E-10 75.3 5.7 51 592-643 2-55 (126)
142 TIGR01684 viral_ppase viral ph 97.8 3.4E-05 7.3E-10 81.7 7.3 71 591-665 126-202 (301)
143 cd01427 HAD_like Haloacid deha 97.7 5E-05 1.1E-09 70.6 5.1 70 593-663 1-79 (139)
144 PHA03398 viral phosphatase sup 97.4 0.00027 5.9E-09 75.1 7.0 71 591-665 128-204 (303)
145 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.1 0.00033 7.1E-09 74.4 2.8 54 592-646 2-55 (257)
146 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.0 0.00058 1.3E-08 72.1 4.4 65 592-661 2-73 (249)
147 PRK10444 UMP phosphatase; Prov 97.0 0.00045 9.7E-09 72.9 3.0 58 591-653 1-58 (248)
148 TIGR01681 HAD-SF-IIIC HAD-supe 97.0 0.0013 2.8E-08 62.1 5.7 56 592-648 1-66 (128)
149 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.001 2.2E-08 62.8 4.9 57 592-649 1-70 (132)
150 PRK09484 3-deoxy-D-manno-octul 96.8 0.00068 1.5E-08 68.1 2.7 60 589-649 19-85 (183)
151 TIGR01672 AphA HAD superfamily 96.8 0.0021 4.6E-08 67.2 6.3 72 575-647 47-153 (237)
152 TIGR01670 YrbI-phosphatas 3-de 96.7 0.00065 1.4E-08 66.3 1.4 55 592-649 2-65 (154)
153 PLN02645 phosphoglycolate phos 96.7 0.001 2.2E-08 72.6 3.0 55 590-649 27-81 (311)
154 TIGR01452 PGP_euk phosphoglyco 96.7 0.0011 2.4E-08 71.2 3.1 51 591-646 2-52 (279)
155 TIGR01664 DNA-3'-Pase DNA 3'-p 96.3 0.0055 1.2E-07 60.6 5.4 49 590-639 12-69 (166)
156 COG2179 Predicted hydrolase of 96.2 0.017 3.6E-07 56.2 7.8 64 587-654 24-87 (175)
157 PF08323 Glyco_transf_5: Starc 96.1 0.017 3.8E-07 60.8 8.3 85 186-271 118-232 (245)
158 COG0763 LpxB Lipid A disacchar 95.6 1.6 3.5E-05 48.3 20.7 273 175-540 69-374 (381)
159 PF13344 Hydrolase_6: Haloacid 95.6 0.0038 8.2E-08 56.4 0.4 48 594-646 1-48 (101)
160 PRK11009 aphA acid phosphatase 95.6 0.025 5.4E-07 59.2 6.4 62 576-638 48-140 (237)
161 TIGR01668 YqeG_hyp_ppase HAD s 95.5 0.03 6.5E-07 55.5 6.5 58 588-648 22-80 (170)
162 COG1778 Low specificity phosph 95.4 0.017 3.6E-07 55.5 3.9 62 587-649 4-72 (170)
163 TIGR01656 Histidinol-ppas hist 95.3 0.02 4.4E-07 55.2 4.5 47 592-639 1-54 (147)
164 TIGR01675 plant-AP plant acid 95.2 0.03 6.4E-07 58.1 5.5 58 590-648 76-159 (229)
165 PF06437 ISN1: IMP-specific 5' 95.2 0.35 7.6E-06 53.0 13.7 189 577-776 133-372 (408)
166 PHA02530 pseT polynucleotide k 95.1 0.032 7E-07 60.3 5.9 58 590-648 157-223 (300)
167 PF02684 LpxB: Lipid-A-disacch 95.0 2.7 6E-05 47.0 20.7 252 194-515 80-343 (373)
168 PF13439 Glyco_transf_4: Glyco 94.9 0.08 1.7E-06 51.1 7.6 99 189-312 73-177 (177)
169 PTZ00445 p36-lilke protein; Pr 94.8 0.048 1E-06 55.4 5.6 62 578-640 30-103 (219)
170 PF02350 Epimerase_2: UDP-N-ac 94.6 8.1 0.00018 42.9 23.2 248 192-512 63-318 (346)
171 TIGR00213 GmhB_yaeD D,D-heptos 94.5 0.026 5.7E-07 56.2 3.0 47 592-639 2-53 (176)
172 TIGR01533 lipo_e_P4 5'-nucleot 94.4 0.031 6.7E-07 59.5 3.3 59 589-648 73-157 (266)
173 PRK06769 hypothetical protein; 94.4 0.032 7E-07 55.5 3.3 50 589-639 2-55 (173)
174 KOG2941 Beta-1,4-mannosyltrans 94.4 1.8 3.9E-05 47.0 16.3 168 333-543 254-435 (444)
175 TIGR01460 HAD-SF-IIA Haloacid 94.2 0.061 1.3E-06 56.3 5.0 50 594-648 1-53 (236)
176 PF08645 PNK3P: Polynucleotide 94.2 0.041 8.9E-07 54.0 3.4 43 592-635 1-52 (159)
177 TIGR03492 conserved hypothetic 94.1 0.61 1.3E-05 52.7 13.2 138 335-513 208-365 (396)
178 TIGR00338 serB phosphoserine p 94.1 0.06 1.3E-06 55.2 4.6 37 612-649 86-122 (219)
179 PRK08942 D,D-heptose 1,7-bisph 94.1 0.043 9.3E-07 54.8 3.4 47 591-638 3-55 (181)
180 PF09419 PGP_phosphatase: Mito 93.9 0.09 2E-06 51.9 5.2 49 587-637 37-86 (168)
181 PF13844 Glyco_transf_41: Glyc 93.9 1.5 3.3E-05 50.2 15.7 106 328-454 276-384 (468)
182 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.8 0.079 1.7E-06 55.6 5.0 54 590-648 7-62 (242)
183 PLN02954 phosphoserine phospha 93.8 0.051 1.1E-06 55.9 3.4 36 613-649 86-121 (224)
184 TIGR01663 PNK-3'Pase polynucle 93.7 0.08 1.7E-06 61.6 5.1 50 589-639 166-224 (526)
185 PRK09552 mtnX 2-hydroxy-3-keto 93.6 0.1 2.2E-06 53.7 5.3 36 613-649 76-111 (219)
186 PRK13225 phosphoglycolate phos 93.5 0.1 2.3E-06 55.8 5.4 35 614-649 145-179 (273)
187 TIGR01680 Veg_Stor_Prot vegeta 93.4 0.079 1.7E-06 56.1 4.1 51 590-641 100-174 (275)
188 PRK11133 serB phosphoserine ph 93.3 0.19 4.1E-06 55.1 7.1 37 612-649 182-218 (322)
189 TIGR01491 HAD-SF-IB-PSPlk HAD- 93.2 0.17 3.7E-06 50.8 6.2 35 614-649 83-117 (201)
190 TIGR01488 HAD-SF-IB Haloacid D 93.1 0.12 2.6E-06 50.8 4.8 35 614-649 76-110 (177)
191 TIGR01685 MDP-1 magnesium-depe 92.9 0.14 3E-06 51.1 4.7 58 591-649 2-83 (174)
192 TIGR01261 hisB_Nterm histidino 92.6 0.11 2.4E-06 51.1 3.6 45 592-637 2-54 (161)
193 TIGR02726 phenyl_P_delta pheny 92.3 0.098 2.1E-06 51.9 2.8 58 591-649 7-71 (169)
194 PRK13288 pyrophosphatase PpaX; 91.7 0.2 4.3E-06 51.3 4.3 35 614-649 85-119 (214)
195 TIGR01686 FkbH FkbH-like domai 91.7 0.31 6.7E-06 53.5 6.1 57 591-648 3-67 (320)
196 PRK05446 imidazole glycerol-ph 91.5 0.19 4.2E-06 55.6 4.3 47 590-637 1-55 (354)
197 TIGR03333 salvage_mtnX 2-hydro 91.5 0.26 5.5E-06 50.7 4.9 36 613-649 72-107 (214)
198 TIGR01489 DKMTPPase-SF 2,3-dik 90.8 0.31 6.7E-06 48.3 4.6 36 613-649 74-109 (188)
199 PF03767 Acid_phosphat_B: HAD 90.6 0.037 7.9E-07 57.7 -2.3 77 589-666 70-169 (229)
200 PF13579 Glyco_trans_4_4: Glyc 90.6 0.31 6.6E-06 46.1 4.3 68 199-271 74-146 (160)
201 PRK13582 thrH phosphoserine ph 90.4 0.24 5.2E-06 50.2 3.5 34 614-649 71-104 (205)
202 TIGR03568 NeuC_NnaA UDP-N-acet 90.4 25 0.00053 39.3 19.9 72 412-511 264-338 (365)
203 COG0647 NagD Predicted sugar p 90.3 0.39 8.4E-06 51.2 5.1 54 590-648 7-63 (269)
204 smart00577 CPDc catalytic doma 90.2 0.37 8E-06 46.6 4.5 58 590-649 1-81 (148)
205 TIGR01545 YfhB_g-proteo haloac 90.1 0.68 1.5E-05 47.6 6.5 34 614-648 97-131 (210)
206 TIGR03351 PhnX-like phosphonat 89.7 0.44 9.6E-06 48.8 4.9 35 614-649 90-124 (220)
207 TIGR01490 HAD-SF-IB-hyp1 HAD-s 89.6 0.7 1.5E-05 46.6 6.2 36 613-649 89-124 (202)
208 PRK10826 2-deoxyglucose-6-phos 89.3 0.49 1.1E-05 48.7 4.8 34 615-649 96-129 (222)
209 COG0381 WecB UDP-N-acetylgluco 89.2 42 0.0009 37.6 20.8 137 334-515 205-344 (383)
210 COG0560 SerB Phosphoserine pho 89.2 0.34 7.4E-06 49.9 3.5 38 611-649 77-114 (212)
211 PRK08238 hypothetical protein; 88.8 0.87 1.9E-05 52.7 6.9 47 612-659 73-120 (479)
212 PLN03243 haloacid dehalogenase 88.7 0.79 1.7E-05 48.8 6.0 34 615-649 113-146 (260)
213 PRK13222 phosphoglycolate phos 88.6 0.49 1.1E-05 48.5 4.2 35 614-649 96-130 (226)
214 TIGR01456 CECR5 HAD-superfamil 87.5 0.82 1.8E-05 50.2 5.4 50 593-646 2-57 (321)
215 COG0637 Predicted phosphatase/ 86.9 0.78 1.7E-05 47.5 4.5 35 614-649 89-123 (221)
216 PRK13226 phosphoglycolate phos 86.7 0.69 1.5E-05 48.0 4.0 35 614-649 98-132 (229)
217 PF08235 LNS2: LNS2 (Lipin/Ned 86.7 0.93 2E-05 44.2 4.6 56 593-649 1-67 (157)
218 TIGR03590 PseG pseudaminic aci 85.6 4.3 9.2E-05 43.6 9.5 92 333-455 170-261 (279)
219 TIGR02137 HSK-PSP phosphoserin 85.4 0.68 1.5E-05 47.3 3.1 36 612-649 69-104 (203)
220 PLN02940 riboflavin kinase 84.8 1.1 2.3E-05 50.5 4.6 33 614-647 96-128 (382)
221 PLN02575 haloacid dehalogenase 84.6 1.1 2.4E-05 50.1 4.6 35 614-649 219-253 (381)
222 PF12689 Acid_PPase: Acid Phos 84.6 1.1 2.4E-05 44.4 4.0 58 591-649 3-83 (169)
223 PF05152 DUF705: Protein of un 83.1 3.8 8.1E-05 43.6 7.3 59 590-649 121-179 (297)
224 COG4359 Uncharacterized conser 82.7 1.4 3.1E-05 43.7 3.8 58 613-673 75-137 (220)
225 TIGR01426 MGT glycosyltransfer 82.6 25 0.00053 39.4 14.5 96 415-538 279-384 (392)
226 TIGR02245 HAD_IIID1 HAD-superf 82.3 2 4.3E-05 43.6 4.9 58 589-648 19-80 (195)
227 PF07429 Glyco_transf_56: 4-al 82.0 14 0.00031 40.6 11.4 139 335-510 187-331 (360)
228 PF03031 NIF: NLI interacting 81.9 0.98 2.1E-05 43.9 2.5 56 592-649 1-72 (159)
229 COG0707 MurG UDP-N-acetylgluco 81.5 54 0.0012 36.6 16.3 86 422-530 244-340 (357)
230 PF06941 NT5C: 5' nucleotidase 81.5 0.61 1.3E-05 47.0 0.9 28 612-640 74-101 (191)
231 COG0241 HisB Histidinol phosph 81.3 1.4 3E-05 44.1 3.3 45 591-636 5-55 (181)
232 COG3882 FkbH Predicted enzyme 80.9 3.9 8.4E-05 46.4 6.8 76 578-654 209-297 (574)
233 PF06888 Put_Phosphatase: Puta 80.8 2.1 4.6E-05 44.7 4.6 37 612-648 72-109 (234)
234 PLN02779 haloacid dehalogenase 80.6 0.93 2E-05 48.9 1.9 27 578-604 27-53 (286)
235 COG0816 Predicted endonuclease 80.4 9.6 0.00021 36.6 8.5 72 351-432 40-111 (141)
236 PRK09456 ?-D-glucose-1-phospha 79.6 3.2 7E-05 41.8 5.5 32 613-645 86-117 (199)
237 COG3914 Spy Predicted O-linked 79.6 19 0.00041 42.0 11.9 101 335-454 431-531 (620)
238 cd03784 GT1_Gtf_like This fami 79.2 1.1E+02 0.0024 34.1 21.2 71 415-511 292-371 (401)
239 PRK10725 fructose-1-P/6-phosph 79.0 1 2.2E-05 44.8 1.5 22 757-778 143-164 (188)
240 TIGR02252 DREG-2 REG-2-like, H 77.9 1.4 3.1E-05 44.4 2.2 20 759-778 163-182 (203)
241 TIGR02250 FCP1_euk FCP1-like p 77.5 3.6 7.8E-05 40.2 4.8 60 588-649 3-94 (156)
242 KOG3742 Glycogen synthase [Car 77.5 35 0.00076 38.6 12.7 73 422-513 492-579 (692)
243 PRK11587 putative phosphatase; 77.3 1.2 2.5E-05 45.8 1.4 14 591-604 3-16 (218)
244 TIGR02251 HIF-SF_euk Dullard-l 76.4 4.6 9.9E-05 39.7 5.3 57 591-649 1-78 (162)
245 TIGR02009 PGMB-YQAB-SF beta-ph 75.3 2.3 5E-05 41.9 2.9 21 758-778 144-164 (185)
246 TIGR01548 HAD-SF-IA-hyp1 haloa 73.9 1.4 3E-05 44.4 0.9 21 758-778 163-183 (197)
247 PF13477 Glyco_trans_4_2: Glyc 73.9 9.3 0.0002 35.6 6.6 41 189-231 67-108 (139)
248 KOG1050 Trehalose-6-phosphate 73.8 0.36 7.7E-06 58.2 -3.9 189 580-776 178-401 (732)
249 PLN02770 haloacid dehalogenase 73.4 1.7 3.6E-05 45.8 1.4 15 590-604 21-35 (248)
250 KOG3120 Predicted haloacid deh 72.6 5.7 0.00012 40.7 4.8 21 587-607 9-29 (256)
251 PRK11590 hypothetical protein; 72.5 1.9 4.1E-05 44.2 1.5 15 590-604 5-19 (211)
252 PRK10748 flavin mononucleotide 72.4 2 4.4E-05 44.8 1.8 15 590-604 9-23 (238)
253 TIGR02253 CTE7 HAD superfamily 72.1 3.5 7.6E-05 42.0 3.4 32 591-625 2-33 (221)
254 PRK13223 phosphoglycolate phos 72.0 2.5 5.4E-05 45.2 2.4 26 753-778 154-179 (272)
255 TIGR01990 bPGM beta-phosphoglu 71.7 2.8 6.2E-05 41.3 2.6 22 757-778 142-163 (185)
256 PF00343 Phosphorylase: Carboh 71.6 1.4E+02 0.0031 36.3 16.8 136 332-488 442-582 (713)
257 PF06258 Mito_fiss_Elm1: Mitoc 70.6 31 0.00068 37.7 10.5 100 333-455 146-250 (311)
258 TIGR01422 phosphonatase phosph 70.4 3.4 7.4E-05 43.4 2.9 14 591-604 2-15 (253)
259 PRK10563 6-phosphogluconate ph 70.3 3.3 7E-05 42.4 2.7 15 590-604 3-17 (221)
260 PF12000 Glyco_trans_4_3: Gkyc 70.3 30 0.00064 34.4 9.3 52 175-228 41-94 (171)
261 PHA02597 30.2 hypothetical pro 70.2 2.1 4.5E-05 43.1 1.2 21 758-780 132-153 (197)
262 TIGR02254 YjjG/YfnB HAD superf 70.1 2.8 6E-05 42.8 2.1 21 758-778 154-175 (224)
263 COG0546 Gph Predicted phosphat 69.1 2.7 5.8E-05 43.3 1.8 33 590-625 3-35 (220)
264 COG3700 AphA Acid phosphatase 68.7 6.2 0.00013 39.0 4.0 69 576-644 48-146 (237)
265 PRK14988 GMP/IMP nucleotidase; 68.7 2.7 5.8E-05 43.5 1.7 14 591-604 10-23 (224)
266 PRK14089 ipid-A-disaccharide s 68.6 2E+02 0.0043 32.0 19.9 84 337-456 172-256 (347)
267 PRK02797 4-alpha-L-fucosyltran 68.4 87 0.0019 34.2 12.9 111 341-488 153-265 (322)
268 TIGR01993 Pyr-5-nucltdase pyri 68.1 3.9 8.5E-05 40.5 2.7 21 758-778 143-163 (184)
269 KOG2884 26S proteasome regulat 67.8 74 0.0016 32.6 11.3 141 341-523 83-236 (259)
270 TIGR01493 HAD-SF-IA-v2 Haloaci 67.3 3.8 8.2E-05 40.2 2.3 20 759-778 142-161 (175)
271 KOG1615 Phosphoserine phosphat 67.1 7.6 0.00017 39.1 4.3 38 611-649 88-125 (227)
272 TIGR01549 HAD-SF-IA-v1 haloaci 66.9 3.7 8E-05 39.3 2.1 24 757-780 119-142 (154)
273 PRK13478 phosphonoacetaldehyde 66.6 4.4 9.6E-05 43.0 2.9 14 591-604 4-17 (267)
274 COG4822 CbiK Cobalamin biosynt 66.1 1.7E+02 0.0036 30.2 14.1 158 233-433 33-193 (265)
275 COG4641 Uncharacterized protei 65.7 25 0.00055 39.0 8.4 115 412-546 239-361 (373)
276 COG4996 Predicted phosphatase 63.9 12 0.00025 35.4 4.5 56 592-648 1-77 (164)
277 TIGR01525 ATPase-IB_hvy heavy 62.9 8.6 0.00019 45.6 4.6 65 584-649 357-422 (556)
278 COG3660 Predicted nucleoside-d 62.1 70 0.0015 34.0 10.3 32 200-234 72-103 (329)
279 PRK01021 lpxB lipid-A-disaccha 62.0 3.5E+02 0.0075 32.5 20.5 28 424-456 482-509 (608)
280 PF11019 DUF2608: Protein of u 61.9 13 0.00028 39.4 5.2 71 578-649 6-118 (252)
281 TIGR01454 AHBA_synth_RP 3-amin 60.9 4.9 0.00011 40.6 1.8 20 758-777 133-152 (205)
282 PRK09449 dUMP phosphatase; Pro 59.8 4.7 0.0001 41.3 1.5 14 591-604 3-16 (224)
283 TIGR01497 kdpB K+-transporting 59.7 14 0.0003 44.7 5.6 69 580-649 415-483 (675)
284 TIGR01511 ATPase-IB1_Cu copper 57.9 12 0.00026 44.4 4.7 61 588-649 382-442 (562)
285 TIGR01449 PGP_bact 2-phosphogl 57.6 6.2 0.00013 39.9 1.9 21 758-778 143-163 (213)
286 TIGR01428 HAD_type_II 2-haloal 57.5 5.4 0.00012 40.0 1.5 13 592-604 2-14 (198)
287 COG2503 Predicted secreted aci 56.0 9.1 0.0002 39.8 2.7 53 588-641 76-151 (274)
288 COG0058 GlgP Glucan phosphoryl 55.5 68 0.0015 39.1 10.2 130 333-488 486-616 (750)
289 PRK06698 bifunctional 5'-methy 55.4 5.9 0.00013 45.7 1.5 29 592-623 242-270 (459)
290 KOG2134 Polynucleotide kinase 54.2 10 0.00022 42.1 2.8 83 588-671 72-177 (422)
291 PRK14986 glycogen phosphorylas 53.2 1.6E+02 0.0035 36.4 12.9 136 333-488 542-681 (815)
292 COG4087 Soluble P-type ATPase 51.7 11 0.00023 35.7 2.2 48 594-647 17-64 (152)
293 PRK01122 potassium-transportin 51.4 25 0.00053 42.7 5.8 68 581-649 415-482 (679)
294 TIGR02247 HAD-1A3-hyp Epoxide 49.9 7.8 0.00017 39.3 1.2 20 759-778 155-174 (211)
295 COG5083 SMP2 Uncharacterized p 49.6 9.5 0.00021 42.7 1.8 72 588-663 372-451 (580)
296 COG1819 Glycosyl transferases, 49.3 2.9E+02 0.0062 31.4 13.8 99 415-543 288-397 (406)
297 PRK11033 zntA zinc/cadmium/mer 49.0 25 0.00055 43.2 5.6 66 583-649 540-605 (741)
298 PRK00109 Holliday junction res 48.9 1.7E+02 0.0036 28.0 10.0 71 352-432 42-112 (138)
299 COG2248 Predicted hydrolase (m 46.9 3.8E+02 0.0083 28.5 12.7 181 174-401 46-239 (304)
300 TIGR00250 RNAse_H_YqgF RNAse H 46.7 1.2E+02 0.0025 28.7 8.5 71 351-431 35-105 (130)
301 KOG2116 Protein involved in pl 46.5 24 0.00053 41.6 4.5 78 588-666 527-615 (738)
302 cd04300 GT1_Glycogen_Phosphory 46.2 3E+02 0.0066 34.1 13.8 137 332-488 528-668 (797)
303 PRK14010 potassium-transportin 45.7 34 0.00075 41.4 5.9 70 579-649 409-478 (673)
304 TIGR01509 HAD-SF-IA-v3 haloaci 45.4 9 0.0002 37.4 0.8 12 593-604 1-12 (183)
305 PF09949 DUF2183: Uncharacteri 44.6 55 0.0012 29.5 5.6 33 350-386 49-81 (100)
306 COG1011 Predicted hydrolase (H 42.9 13 0.00028 37.9 1.5 17 590-606 3-19 (229)
307 PF12710 HAD: haloacid dehalog 42.6 11 0.00025 37.1 1.0 11 594-604 1-11 (192)
308 PF00702 Hydrolase: haloacid d 42.3 9.2 0.0002 38.4 0.3 29 592-623 2-34 (215)
309 TIGR01106 ATPase-IIC_X-K sodiu 41.4 38 0.00082 43.2 5.6 40 609-649 566-605 (997)
310 PRK04128 1-(5-phosphoribosyl)- 40.1 61 0.0013 33.7 6.0 62 578-647 31-93 (228)
311 PF13419 HAD_2: Haloacid dehal 39.9 11 0.00023 36.2 0.3 21 758-778 135-155 (176)
312 PF10933 DUF2827: Protein of u 38.8 2.7E+02 0.0059 31.0 10.8 155 333-528 189-345 (364)
313 KOG1618 Predicted phosphatase 38.0 25 0.00055 38.1 2.7 41 591-635 35-78 (389)
314 TIGR01522 ATPase-IIA2_Ca golgi 37.9 40 0.00088 42.4 5.0 67 582-649 494-565 (884)
315 TIGR01647 ATPase-IIIA_H plasma 36.3 57 0.0012 40.3 5.9 66 583-649 409-479 (755)
316 PRK14985 maltodextrin phosphor 35.7 3E+02 0.0065 34.1 11.5 136 333-488 528-667 (798)
317 KOG2882 p-Nitrophenyl phosphat 35.6 28 0.00061 37.5 2.7 56 589-649 20-75 (306)
318 TIGR01512 ATPase-IB2_Cd heavy 35.3 33 0.00071 40.5 3.5 62 587-649 338-400 (536)
319 PRK10671 copA copper exporting 35.2 68 0.0015 40.1 6.4 67 582-649 621-687 (834)
320 PRK13587 1-(5-phosphoribosyl)- 32.7 1.2E+02 0.0027 31.6 6.9 60 577-647 148-212 (234)
321 PF13528 Glyco_trans_1_3: Glyc 31.5 3.1E+02 0.0068 29.2 10.2 81 332-455 191-271 (318)
322 PF00702 Hydrolase: haloacid d 30.3 12 0.00027 37.4 -1.0 62 587-649 103-164 (215)
323 KOG4549 Magnesium-dependent ph 29.7 78 0.0017 29.8 4.1 56 591-647 18-80 (144)
324 PLN02919 haloacid dehalogenase 29.6 33 0.00072 44.0 2.4 20 759-778 221-240 (1057)
325 COG1168 MalY Bifunctional PLP- 29.6 8.5E+02 0.019 27.4 13.9 90 353-449 147-240 (388)
326 PF04464 Glyphos_transf: CDP-G 29.5 7.9E+02 0.017 27.0 18.0 231 202-515 81-339 (369)
327 TIGR01548 HAD-SF-IA-hyp1 haloa 28.7 1E+02 0.0022 30.7 5.4 34 615-649 110-143 (197)
328 PRK14057 epimerase; Provisiona 28.3 4.3E+02 0.0092 28.1 9.9 66 370-439 157-223 (254)
329 PF04312 DUF460: Protein of un 28.2 52 0.0011 31.4 2.8 51 593-647 45-97 (138)
330 TIGR01657 P-ATPase-V P-type AT 28.2 72 0.0016 41.0 5.0 39 610-649 655-693 (1054)
331 PRK10517 magnesium-transportin 28.0 86 0.0019 39.6 5.6 66 583-649 506-587 (902)
332 TIGR02093 P_ylase glycogen/sta 28.0 5.1E+02 0.011 32.2 11.7 135 333-487 526-664 (794)
333 KOG4626 O-linked N-acetylgluco 27.4 5.8E+02 0.013 30.7 11.3 168 350-551 773-945 (966)
334 KOG3040 Predicted sugar phosph 27.4 52 0.0011 33.7 2.8 53 590-647 6-61 (262)
335 PHA03392 egt ecdysteroid UDP-g 27.3 1E+03 0.023 27.8 14.1 101 415-541 350-465 (507)
336 PF13419 HAD_2: Haloacid dehal 27.1 41 0.00089 32.0 2.1 37 612-649 78-114 (176)
337 KOG0390 DNA repair protein, SN 26.9 1E+03 0.023 29.5 14.0 126 337-513 563-693 (776)
338 TIGR01454 AHBA_synth_RP 3-amin 26.8 59 0.0013 32.6 3.3 37 612-649 76-112 (205)
339 PRK11590 hypothetical protein; 26.3 79 0.0017 32.1 4.1 44 613-657 97-144 (211)
340 cd07018 S49_SppA_67K_type Sign 26.3 92 0.002 32.1 4.6 47 594-640 1-58 (222)
341 cd04249 AAK_NAGK-NC AAK_NAGK-N 26.0 2.2E+02 0.0048 29.9 7.5 69 577-647 155-244 (252)
342 COG2217 ZntA Cation transport 25.1 86 0.0019 38.3 4.7 68 581-649 507-574 (713)
343 TIGR03286 methan_mark_15 putat 24.9 3.2E+02 0.007 31.0 8.7 76 382-482 8-83 (404)
344 TIGR01449 PGP_bact 2-phosphogl 24.4 69 0.0015 32.2 3.2 37 612-649 86-122 (213)
345 TIGR01524 ATPase-IIIB_Mg magne 24.3 98 0.0021 38.9 5.1 68 581-649 469-552 (867)
346 KOG3109 Haloacid dehalogenase- 23.9 62 0.0014 33.4 2.7 16 590-605 14-29 (244)
347 COG0036 Rpe Pentose-5-phosphat 23.8 4.7E+02 0.01 27.2 9.0 75 354-438 123-198 (220)
348 PRK08091 ribulose-phosphate 3- 23.6 3.4E+02 0.0075 28.3 8.2 66 370-439 143-209 (228)
349 PRK10422 lipopolysaccharide co 23.4 7.2E+02 0.016 27.2 11.4 88 332-438 182-270 (352)
350 TIGR01517 ATPase-IIB_Ca plasma 23.3 1.1E+02 0.0024 38.8 5.4 40 609-649 577-616 (941)
351 PRK09722 allulose-6-phosphate 23.2 3.7E+02 0.0081 28.0 8.3 65 370-438 133-198 (229)
352 KOG0331 ATP-dependent RNA heli 22.6 3.9E+02 0.0084 31.4 9.0 93 336-440 130-225 (519)
353 PRK07090 class II aldolase/add 22.5 4.8E+02 0.01 27.7 9.3 52 591-645 80-131 (260)
354 TIGR00661 MJ1255 conserved hyp 22.3 1.7E+02 0.0037 31.8 6.0 68 422-513 239-315 (321)
355 PF06189 5-nucleotidase: 5'-nu 21.8 86 0.0019 33.3 3.3 58 592-649 122-207 (264)
356 PRK15122 magnesium-transportin 21.4 1.3E+02 0.0028 38.0 5.4 41 608-649 547-587 (903)
357 TIGR01549 HAD-SF-IA-v1 haloaci 20.0 96 0.0021 29.3 3.1 34 614-648 67-100 (154)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.2e-183 Score=1626.64 Aligned_cols=780 Identities=67% Similarity=1.120 Sum_probs=738.8
Q ss_pred CCcccccchhhhccCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCC-CCCCCCcEEEEECCCccceeecCCC-
Q 003999 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDAT-SSGSRERKIIVANMLPLHAKRDTET- 78 (780)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~iivsnrlP~~~~~~~~~- 78 (780)
|+||||+|||||++|++..++++.+++|++|++||+++++|+++.++.+++.+ +..+.+|+||||||||+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988888887766 4566789999999999999987543
Q ss_pred CcEEEEecCChhHHhhhhcccC-CCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecChHhhhhHhhcccccccccc
Q 003999 79 GRWCFSLDEDLLLLHLKDGFSS-DTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPL 157 (780)
Q Consensus 79 ~~~~~~~~~~~l~~~l~~~l~~-~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~~~~~~~y~gf~~~~LWpl 157 (780)
++|+|++++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 7999999999999999988854 478999999999888888888888888899999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChh
Q 003999 158 FHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237 (780)
Q Consensus 158 ~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e 237 (780)
|||+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888887789999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC
Q 003999 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL 317 (780)
Q Consensus 238 ~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~ 317 (780)
+||+||||++||+|||+||+|||||++|+|||++||+|+||++++.++|+++++|+||+++|+++|+|||+++|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred chhHHHHHHHHHHcC--CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHH
Q 003999 318 PATATKIKEIEKQFD--GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYL 395 (780)
Q Consensus 318 ~~~~~~~~~lr~~~~--~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~ 395 (780)
|++.+++++++++++ |+++|+||||+|++|||.+||+|||+||++||+|+|||+||||++|+|+++++|+++++++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCce
Q 003999 396 TAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475 (780)
Q Consensus 396 lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~ 475 (780)
+|++||++||+.+|+||+|+++.++++|+.|||++||||+|||+|||||||++||+|||++.+.++++++.+..++++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988778888887777788999
Q ss_pred EEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHhhcccc
Q 003999 476 LVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKR 555 (780)
Q Consensus 476 lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~~~~~~ 555 (780)
||+|||+||+++|+||++|||||++++|+||.+||+||.+||+.||++++++|++||+.+|+++|+++|+++|++|++++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc
Q 003999 556 CWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 556 ~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS 635 (780)
||++|+|++||+++++|+|++|++++|+++|+++++|+|++||||||+|..+....|+++++++|++|+++++|.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999997755678999999999999999999999999
Q ss_pred CCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccC
Q 003999 636 GRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715 (780)
Q Consensus 636 GR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~a 715 (780)
||+++.|++||+.+++++++||||++++++++..|+......+..|++.++++++.|++++||++||.|+++++||||++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988789999999999999877789865444567899999999999999999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH---cCCCCCc-cccCC
Q 003999 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLS---VCVRARA-CKLDD 780 (780)
Q Consensus 716 d~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~---l~i~~~~-~~~~~ 780 (780)
||+++.+|++++.++++..+.+.++.+.+|+++|||+|+|+|||.|+++|++. +|++++. +.+||
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GD 789 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGD 789 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcC
Confidence 99999999999999999999888888999999999999999999999999865 5776643 34444
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.2e-154 Score=1365.82 Aligned_cols=672 Identities=36% Similarity=0.657 Sum_probs=616.1
Q ss_pred CCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChh-HHHHHHHhhccCccEEEee
Q 003999 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVPTF 136 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~-~~~~v~~~l~~~~~~~pv~ 136 (780)
++|+||||||||+.+++++ +|+|+++++.|||+++|. ++ ...+++||||+|..++.+ +++.+.+. +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~-~g~~~~~~s~GGLvsaL~-~~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRG-EDSWSLEISAGGLVSALL-GV-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecC-CCceEEeECCCCcHHHhc-cc-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 6899999999999998865 489999999999999997 56 578999999999876653 45555444 5789999999
Q ss_pred cChHhhhhHhhccccccccccccccC-CCCC-CCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHH
Q 003999 137 LPHDLQKKFYLGFCKQHLWPLFHYML-PMCP-DHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (780)
Q Consensus 137 l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~~-~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~ 214 (780)
|+++++++||+||||++|||+|||+. +..+ ....+|+++.|++|++||++||++|+++++| +|+|||||||||+||.
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2211 0124688899999999999999999999997 5999999999999999
Q ss_pred HHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcC
Q 003999 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294 (780)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~g 294 (780)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999998643 3588999
Q ss_pred eEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 295 r~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
|.++|.++|+|||++.|...+..+++.+++++++++|+++++|+||||||++|||.+||+||++||++||+|+|||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
|+.|+|+++++|++++.++.++|++||++||+.+|.||+|+.+.++++|+.|+|++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCH
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 533 (780)
.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+
T Consensus 484 ~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~ 548 (934)
T PLN03064 484 DS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTA 548 (934)
T ss_pred cC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCH
Confidence 63 57999999999999999 489999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCC-----
Q 003999 534 AYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSI----- 608 (780)
Q Consensus 534 ~~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~----- 608 (780)
.+|+++|+.+|+++..++..+ + .. .+++|+.+.+.++|+++++|+|||||||||+|+.+.
T Consensus 549 ~~Wa~~fl~~L~~~~~~~~~~-~-----------~~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~ 613 (934)
T PLN03064 549 QEWAETFVSELNDTVVEAQLR-T-----------RQ---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRG 613 (934)
T ss_pred HHHHHHHHHHHHHHHhhhhcc-c-----------cc---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccc
Confidence 999999999999886543211 1 11 124789999999999999999999999999997532
Q ss_pred ------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEe-cCCCcChhH
Q 003999 609 ------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET-NHLGADLEW 681 (780)
Q Consensus 609 ------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~-~~~~~d~~w 681 (780)
...|+++++++|++|++||+|.|+|+|||+++.|++||+.+ +++++||||++++.++ ..|.. +....+.+|
T Consensus 614 ~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W 691 (934)
T PLN03064 614 DQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDW 691 (934)
T ss_pred ccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHH
Confidence 33578999999999999999999999999999999999987 7999999999999874 57973 334446789
Q ss_pred HHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHH-HHHhcCCCeEEEEcCeEEEEEeCCCCHHH
Q 003999 682 KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKPQVLRPSS 760 (780)
Q Consensus 682 k~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L-~~~l~~~~v~v~~g~~~vEI~p~gvsKG~ 760 (780)
++.+.++|++|+++|||++||.|+++++||||++||+++..||+++.++| ...+++.++.|+.|+++|||+|.|+|||.
T Consensus 692 ~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~ 771 (934)
T PLN03064 692 VDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGA 771 (934)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999 45666778999999999999999999999
Q ss_pred HHHHHHHHcC
Q 003999 761 ISVSLSLSVC 770 (780)
Q Consensus 761 al~~Ll~~l~ 770 (780)
|+++|++.+.
T Consensus 772 Av~~ll~~~~ 781 (934)
T PLN03064 772 AIDRILGEIV 781 (934)
T ss_pred HHHHHHHhhh
Confidence 9999999763
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.5e-145 Score=1301.20 Aligned_cols=672 Identities=36% Similarity=0.672 Sum_probs=610.5
Q ss_pred CCCCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChh-HHHHHHHhhccCccEEE
Q 003999 56 GSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVP 134 (780)
Q Consensus 56 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~-~~~~v~~~l~~~~~~~p 134 (780)
..++|+||||||||+.+.+++ +|+|+|++++|||+++|. ++ ...+++||||+|.+++++ ++..+.+ .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~-~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALL-GV-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHH-HH-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 457899999999999988764 489999999999999997 55 457999999999876554 3444443 467899999
Q ss_pred eecChHhhhhHhhcccccccccccccc-CCCCCC-CCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchH
Q 003999 135 TFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPD-HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212 (780)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~-~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~ll 212 (780)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++| +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 99999999999999999999998 332222 114566789999999999999999999997 59999999999999
Q ss_pred HHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEE
Q 003999 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDY 292 (780)
Q Consensus 213 p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~ 292 (780)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|++|+++.. .++.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~----~~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTH----EGVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccC----CceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653 24779
Q ss_pred cCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEE
Q 003999 293 FGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVL 372 (780)
Q Consensus 293 ~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 372 (780)
+|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||+|+.|||.++|+||++||+++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999998877777777777889999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhh
Q 003999 373 VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIV 452 (780)
Q Consensus 373 vqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~a 452 (780)
|||+.|+|+++++|+++++++++++++||.+||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 453 CRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 453 c~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
||.+ ++|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|++|
T Consensus 398 ~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 398 CQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462 (797)
T ss_pred eecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC
Confidence 9863 46999999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCC----
Q 003999 532 DVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS---- 607 (780)
Q Consensus 532 ~~~~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~---- 607 (780)
|+.+|+++|+++|+++++.+..+. ...+.+|+.+.+.++|+++++|+|||||||||++..+
T Consensus 463 ~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~ 527 (797)
T PLN03063 463 SAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK 527 (797)
T ss_pred CHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc
Confidence 999999999999999987643210 1234578999999999999999999999999998754
Q ss_pred -CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecC-CCcChhHHHHH
Q 003999 608 -IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNH-LGADLEWKKIV 685 (780)
Q Consensus 608 -~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~-~~~d~~wk~~v 685 (780)
....|+++++++|++|+++|+|.|+|+|||+++.|++||+.+ +++++||||++++.. +..|.... ...+.+|++.+
T Consensus 528 p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v 605 (797)
T PLN03063 528 EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGV 605 (797)
T ss_pred cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHH
Confidence 335689999999999999999999999999999999999975 799999999999976 45798543 33467899999
Q ss_pred HHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHH-HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHH
Q 003999 686 EPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKPQVLRPSSISVS 764 (780)
Q Consensus 686 ~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L-~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~ 764 (780)
.++|++|++++||++||.|+++++||||++||+++..|++++.++| +..+.+.++.++.|+++|||+|+|+|||.|++.
T Consensus 606 ~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ 685 (797)
T PLN03063 606 KNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGR 685 (797)
T ss_pred HHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHH
Confidence 9999999999999999999999999999999999999999999998 445567789999999999999999999999999
Q ss_pred HHHHc
Q 003999 765 LSLSV 769 (780)
Q Consensus 765 Ll~~l 769 (780)
|++.+
T Consensus 686 ll~~~ 690 (797)
T PLN03063 686 ILGEI 690 (797)
T ss_pred HHHHh
Confidence 99986
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.4e-135 Score=1215.87 Aligned_cols=667 Identities=36% Similarity=0.651 Sum_probs=609.2
Q ss_pred CcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCCh---hHHHHHHHhhccCccEEEe
Q 003999 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA---SEQEEVAQKLLDDFNCVPT 135 (780)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~---~~~~~v~~~l~~~~~~~pv 135 (780)
+|+||||||+|+.+++++ |+|++++++|||+++|.+.+ ...+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~-~~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFH-ERGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHh-hcCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988753 58999999999999997555 45789999999987553 2333343 34678999999
Q ss_pred ecChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHH
Q 003999 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (780)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~ 215 (780)
||+++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||.+
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 3799999999999999999999999998 59999999999999999
Q ss_pred HHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCe
Q 003999 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (780)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr 295 (780)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||+|++++++.. .++.++|+
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999987543 25789999
Q ss_pred EEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEE
Q 003999 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (780)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (780)
.++|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887777777778889999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 376 ~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
+.|+|.+.++|+++++++.+++++||++||+.+|.||+++.+.++++|+.++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998877999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 456 GTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+||.+|++.|+++++++|.+||+..
T Consensus 387 ~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~ 451 (726)
T PRK14501 387 D---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHK 451 (726)
T ss_pred C---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4 3589999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCC--CCCCCC
Q 003999 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS--IIKSPG 613 (780)
Q Consensus 536 Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~--~~~~ps 613 (780)
|+++|+++++++++.+... .+..|+.|+++.+..+|+++++|+|+|||||||++... ....|+
T Consensus 452 w~~~~l~~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~ 516 (726)
T PRK14501 452 WASDFLDELREAAEKNKAF---------------ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPD 516 (726)
T ss_pred HHHHHHHHHHHHHhhhhcc---------------ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCC
Confidence 9999999999988765321 12236678999999999999999999999999999642 335689
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHH
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYT 693 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~ 693 (780)
++++++|++|++++||.|+|+|||++..++++|+.+ .+++|||||++++.++ ..|..... .+..|++.++++++.+.
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHH
Confidence 999999999999889999999999999999999887 5899999999999664 57876432 46789999999999999
Q ss_pred hcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCC
Q 003999 694 EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVR 772 (780)
Q Consensus 694 e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~ 772 (780)
++++|+++|.|+.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|+++|++.++.+
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d 672 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYD 672 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999998889999999998888888899999999999999999999999999944333
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-128 Score=1114.07 Aligned_cols=667 Identities=54% Similarity=0.928 Sum_probs=635.3
Q ss_pred CCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeec
Q 003999 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFL 137 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l 137 (780)
..|+|+|||+||+.+.+..+++.|.|+++.+|++.++++++. .++..||||++.+++.++++.+.+.++..++|+|||+
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 579999999999999766778999999999999999986665 7889999999988999999999999999999999999
Q ss_pred ChHhhhhHhhcccccccccccccc-CCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHH
Q 003999 138 PHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFL 216 (780)
Q Consensus 138 ~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~l 216 (780)
+++...++|++|||++|||+|||+ .|..+.+. .|+.+.|++|+.+|++||++|++.++ ++|+|||||||||++|+|+
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 67666654 78899999999999999999999999 5799999999999999999
Q ss_pred HHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeE
Q 003999 217 RKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296 (780)
Q Consensus 217 r~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~ 296 (780)
|++.++++||||+|+|||++|+|+++|.|++||++|++||+|||||++|+|||++||.|++++++.++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEE
Q 003999 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (780)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (780)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|+||||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 377 ~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
+|+++++++|++++.++..++.+||++||+..+.||+++...++..++.|+|.+||||+++++||||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+.+++|+|||+|+++++ ++++++||||.+++|.+|..||+|+++|+..|+.++++++..|+..+
T Consensus 399 ---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~ 463 (732)
T KOG1050|consen 399 ---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVY 463 (732)
T ss_pred ---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHH
Confidence 56999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHH
Q 003999 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPE 615 (780)
Q Consensus 536 Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~ 615 (780)
|+.+|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+++..++.
T Consensus 464 W~~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------ 521 (732)
T KOG1050|consen 464 WAKSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------ 521 (732)
T ss_pred HHHHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------
Confidence 999999844 45677788 88887765 789999999999999999999999999855432
Q ss_pred HHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhc
Q 003999 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA 695 (780)
Q Consensus 616 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~ 695 (780)
++..|+.||+||+|.|+|+|||++..+++|+..++++|++||||+++|++++ |+++. .+.+|++.+.++|++|+++
T Consensus 522 ~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~er 597 (732)
T KOG1050|consen 522 AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTER 597 (732)
T ss_pred HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999976 99865 6889999999999999999
Q ss_pred CCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcC
Q 003999 696 TDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVC 770 (780)
Q Consensus 696 t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~ 770 (780)
||||++|.|+++++|||+++||+||.+||+||+++|+. .+.++.++.|+..|||+|.|+|||.++..++..++
T Consensus 598 t~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~ 670 (732)
T KOG1050|consen 598 TPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV 670 (732)
T ss_pred CCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998 78899999999999999999999999999999999
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=5.4e-121 Score=1015.49 Aligned_cols=456 Identities=27% Similarity=0.516 Sum_probs=419.8
Q ss_pred CCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeec
Q 003999 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFL 137 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l 137 (780)
++|+||||||+|+.. +. +.+.|||+++|.+.+. ..+++||||+|...+++ +.+.....++++|+||+|
T Consensus 1 m~rLivVSNRlp~~~------~~---~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~~--~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPD------EH---KASAGGLAVGILGALK-AAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCC------CC---CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCCc--ccchhhhcCCceEEEecC
Confidence 369999999999632 11 4457999999987664 57899999999753321 223333345799999999
Q ss_pred ChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHH
Q 003999 138 PHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLR 217 (780)
Q Consensus 138 ~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr 217 (780)
+++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999876 3799999999999999999999999998 5999999999999999999
Q ss_pred HhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEE
Q 003999 218 KRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297 (780)
Q Consensus 218 ~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~ 297 (780)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876432 2467889999
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEc
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (780)
+|.++|+|||++.|...+..+ +..++++++++++++++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999999887755 5677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCC
Q 003999 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (780)
Q Consensus 378 p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~ 457 (780)
|+|++.++|++++++++++|++||++||+.+|.||+|+++.++++++.|+|++||||+|||+|||||||++||+||+.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHH
Q 003999 458 PIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWA 537 (780)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa 537 (780)
+++|+||+|||+||+++|++|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|+
T Consensus 378 -------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~ 444 (474)
T PRK10117 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQ 444 (474)
T ss_pred -------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHH
Confidence 2579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003999 538 RSFAQDLERACR 549 (780)
Q Consensus 538 ~~~l~~l~~~~~ 549 (780)
++||.+|.++..
T Consensus 445 ~~fL~~L~~~~~ 456 (474)
T PRK10117 445 ECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHhhh
Confidence 999999998743
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=1.4e-119 Score=1015.14 Aligned_cols=462 Identities=28% Similarity=0.467 Sum_probs=427.0
Q ss_pred EECCCccceeecCCC-CcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCCh-hHH-HHHHHhhccCccEEEeecChH
Q 003999 64 VANMLPLHAKRDTET-GRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQ-EEVAQKLLDDFNCVPTFLPHD 140 (780)
Q Consensus 64 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~-~~~-~~v~~~l~~~~~~~pv~l~~~ 140 (780)
||||||+.+++++++ .+|.+++++|||+++|.+.+....+++||||+|.+.++ ++. ..+......+|+|+||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999986542 34888999999999998777556789999999975322 111 112212245799999999999
Q ss_pred hhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhc
Q 003999 141 LQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRF 220 (780)
Q Consensus 141 ~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 220 (780)
++++||+||||++|||+|||++.. ..|++.+|++|++||++||++|++.+++ +|+|||||||||+||.+||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998665 4799999999999999999999999997 5999999999999999999999
Q ss_pred CCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCc--------------
Q 003999 221 NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG-------------- 286 (780)
Q Consensus 221 ~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g-------------- 286 (780)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred ---eeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhC
Q 003999 287 ---HIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQH 363 (780)
Q Consensus 287 ---~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~ 363 (780)
.+++.|+||+++|+++|+|||++.|.+....+++.++++++|+++.++++|+||||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 23588999999999999999999999988888888889999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCC
Q 003999 364 PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGM 443 (780)
Q Consensus 364 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGm 443 (780)
|+++||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++.+++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003999 444 NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523 (780)
Q Consensus 444 nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (780)
|||++|||||+.+ ++||||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.||++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999863 4699999999999999999999999999999999999999999999999999
Q ss_pred HhhHhhhCCHHHHHHHHHHHHHH
Q 003999 524 HYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 524 ~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
++++|.+||+.+|+++|+.+|+.
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999975
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=3.1e-120 Score=1023.07 Aligned_cols=467 Identities=45% Similarity=0.844 Sum_probs=358.2
Q ss_pred cEEEEECCCccceeecCCCCc--EEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhH--HHHHHHhhccCccEEEe
Q 003999 60 RKIIVANMLPLHAKRDTETGR--WCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASE--QEEVAQKLLDDFNCVPT 135 (780)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~--~~~v~~~l~~~~~~~pv 135 (780)
|+||||||||+.+++++++|+ |+++.+.|||+++|. ++.+..+++||||++.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~-~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALD-PLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHH-HHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHH-HHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999998875566 777888999999986 4444589999999998766544 45566677899999999
Q ss_pred ecChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHH
Q 003999 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (780)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~ 215 (780)
||+++++++||+||||++|||+|||..+..+ ....|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876222 225799999999999999999999999997 59999999999999999
Q ss_pred HHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCe
Q 003999 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (780)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr 295 (780)
||+++|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6999999
Q ss_pred EEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
.++|.++|+|||++.|...+.++++.+++++|++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988889999999999999988 49999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||++||+|||||||++||+||+
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCH
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 533 (780)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 74 479999999999999997 67999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003999 534 AYWARSFAQDLER 546 (780)
Q Consensus 534 ~~Wa~~~l~~l~~ 546 (780)
.+|+++||++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-114 Score=956.51 Aligned_cols=466 Identities=39% Similarity=0.682 Sum_probs=431.6
Q ss_pred CCCCCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEE
Q 003999 55 SGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVP 134 (780)
Q Consensus 55 ~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~p 134 (780)
.....|+|+||||+|+...+..+++...++.++|||+++|++ +....+++|+||+|...+.++..........++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~-~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKP-LLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcch-hhHhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 456789999999999998766666788899999999999984 4456899999999987642232222222345899999
Q ss_pred eecChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHH
Q 003999 135 TFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (780)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~ 214 (780)
|+++.+++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.+++ +|+||||||||+|+|.
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhHH
Confidence 999999999999999999999999999876 4799999999999999999999999997 5999999999999999
Q ss_pred HHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEE---
Q 003999 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--- 291 (780)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--- 291 (780)
|||++.|+++||||||+|||++|+|+|||+|+|||+|||+||+|||||++|++||+++|+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986521 2233
Q ss_pred EcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCce
Q 003999 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKV 370 (780)
Q Consensus 292 ~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~v 370 (780)
++|+.+++..+|+|||+..|......+.+..++.++++.+.+ +++|+||||+|++||+..+|+||++||++||+|+|||
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 447999999999999999999999888888889999999976 9999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea 450 (780)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++.+++.|||++|||++|||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
+||+.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+.+||++|++++++.|.+
T Consensus 399 Va~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~ 463 (486)
T COG0380 399 VAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLT 463 (486)
T ss_pred HHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 999863 57999999999999999899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 003999 531 HDVAYWARSFAQDLERA 547 (780)
Q Consensus 531 ~~~~~Wa~~~l~~l~~~ 547 (780)
||+++|+++|+.+|.+.
T Consensus 464 ~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 464 HDVARWANSFLDDLAQA 480 (486)
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 99999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=6.7e-108 Score=926.06 Aligned_cols=454 Identities=39% Similarity=0.708 Sum_probs=422.4
Q ss_pred cEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCCh-hHHHHHHHhhccCccEEEeecC
Q 003999 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQEEVAQKLLDDFNCVPTFLP 138 (780)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~-~~~~~v~~~l~~~~~~~pv~l~ 138 (780)
|+||||||+|+.+.++ + ++.+.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 7999999999988653 2 67778999999986654 5799999999976553 3334555556788999999999
Q ss_pred hHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHH
Q 003999 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (780)
Q Consensus 139 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~ 218 (780)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.+++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999665 4799999999999999999999999997 59999999999999999999
Q ss_pred hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEE
Q 003999 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (780)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~ 298 (780)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999877542 4678899999
Q ss_pred EEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcC
Q 003999 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (780)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (780)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999887777777888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCC
Q 003999 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (780)
Q Consensus 379 ~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~ 458 (780)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred ccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
..|+||+|+++|+++++.+|++|||||++++|+||.++|+||.+||+.|+++++++|.+||+..|++
T Consensus 382 -------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 382 -------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred -------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 3589999999999999989999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003999 539 SFAQDLE 545 (780)
Q Consensus 539 ~~l~~l~ 545 (780)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=3.3e-98 Score=852.54 Aligned_cols=459 Identities=44% Similarity=0.789 Sum_probs=426.3
Q ss_pred cEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecCh
Q 003999 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPH 139 (780)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~ 139 (780)
|+||||||+|+.++++++ |.|.++++.|||+++|.+ +.+..+++||||++.+.+..+...+.+.++.+|+|+||||++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~-~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKG-LLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHH-HHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998754 799999999999999975 445679999999998876655444556668899999999999
Q ss_pred HhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHh
Q 003999 140 DLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKR 219 (780)
Q Consensus 140 ~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~ 219 (780)
+++++||+||||++|||+|||..+. .+|++++|++|+++|++||++|++.+++ +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 4799999999999999999999999997 599999999999999999999
Q ss_pred cCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEE
Q 003999 220 FNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299 (780)
Q Consensus 220 ~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i 299 (780)
.++++||||+|||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++.+.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886652 358899999999
Q ss_pred EEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC
Q 003999 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (780)
.++|+|||++.|.+....++..+++.+++..++++++|++|||+++.||+..+|+||+++++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999988766666666666777777899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999863
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHH
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~ 539 (780)
++|++|+|+++|+++.+.+|++|||+|++++|+||.++|+|+++|++.|+++++++|.++|+..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 46899999999999988889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 003999 540 FAQDL 544 (780)
Q Consensus 540 ~l~~l 544 (780)
|+.+|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99887
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=3e-34 Score=342.28 Aligned_cols=525 Identities=14% Similarity=0.128 Sum_probs=324.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhh-----------------cCCChHHHH-HhhhcCCEEEee
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-----------------TLPVRDEIL-RGLLNCDLIGFH 261 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~-----------------~lp~r~eil-~~ll~~Dligf~ 261 (780)
|+||-|+++--.+...|++++ ++|.+++.|+.= .+-++ .++.|-+.- ..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSLg--r~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLG--RDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccch--hhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999999888888888875 689999999741 11111 012222221 235679999998
Q ss_pred cHHHHHHHHHHH-------HhhhCceeccCCceeEEEEcCe-EEEEEEeecCCCchhhhhhcCCchh-------------
Q 003999 262 TFDYARHFLSCC-------SRMLGLDYESKRGHIGLDYFGR-TVYIKILPVGVHMGRLESVLNLPAT------------- 320 (780)
Q Consensus 262 t~~y~~~Fl~~~-------~r~l~~~~~~~~g~~~~~~~gr-~~~i~i~P~GId~~~~~~~~~~~~~------------- 320 (780)
|......-...- .|.|.. ..++ ++.++|+ ..++.++|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 887765432210 011100 0111 2333332 2378999999999999864211100
Q ss_pred HHHHHHHHHHc--CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHH----HHHHHHHH
Q 003999 321 ATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV----QEAKKETY 394 (780)
Q Consensus 321 ~~~~~~lr~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~----~~l~~ei~ 394 (780)
.....+++..+ +++++||+|+|+++.||+..+|+||..+.+..+.. ++++| +|... ...+. .+...++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~LI-iG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-MGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEEE-EecCc--hhhhhhccchHHHHHHH
Confidence 01122444444 67899999999999999999999999986543321 23343 45311 11111 12234556
Q ss_pred HHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc----ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCC
Q 003999 395 LTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDS 470 (780)
Q Consensus 395 ~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~ 470 (780)
.++++.+- .+ .|. |.++++.+++.++|+.| ||||+||.+||||++++||||||
T Consensus 539 ~li~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG---------------- 595 (1050)
T TIGR02468 539 KLIDKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG---------------- 595 (1050)
T ss_pred HHHHHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----------------
Confidence 66655432 11 255 55789999999999998 69999999999999999999997
Q ss_pred CCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 471 PHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 471 ~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.++ .++...+..++.+.+++|...++.+++.+...
T Consensus 596 ---lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpe-lr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 596 ---LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQ-LWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred ---CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 4899999999888873 5999999999999999999998654 45555566788899999999999999888876
Q ss_pred HHhhcc-cccc-----cc-----C--------CCccceeeccCccccc----------CC----HHHHHHH---------
Q 003999 548 CRDHYS-KRCW-----GI-----G--------LGLGFRVLSLSPSFRR----------LS----IDHIVSA--------- 585 (780)
Q Consensus 548 ~~~~~~-~~~~-----~~-----g--------~g~~~~~~~~~~~f~~----------l~----~~~i~~~--------- 585 (780)
+..+.. ++.. .. + .++++.+ +-.... ++ ...|..+
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 544311 0000 00 1 0011110 000000 00 0111111
Q ss_pred --------------HH--hccCceEE--eCCCCCCCCCCCCCCCCCHHHHHHHHHhcc---CCCCEEEEEcCCChhhHHH
Q 003999 586 --------------YR--KTERRAIF--LDYDGTVVPETSIIKSPGPEVISVLKTLCS---DPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 586 --------------y~--~a~~rlI~--lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~---d~g~~V~IvSGR~~~~L~~ 644 (780)
|. ...+++|+ +|+|+| .. ..+.+.++++.+.+ ...+.++++|||+...+.+
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~ 820 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQS 820 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHH
Confidence 11 11245666 999999 32 23444555555542 2247799999999999999
Q ss_pred Hhcc--CC---CceEEecCccEEeeCC-----CCceEec---CCCcChhHH-HHHHHHHHHHHhc--------CCCceee
Q 003999 645 WLAP--CE---MLGIAAEHGYFIRWNK-----TSEWETN---HLGADLEWK-KIVEPVMRSYTEA--------TDGSNIE 702 (780)
Q Consensus 645 ~f~~--l~---~lgliaenG~~ir~~~-----~~~w~~~---~~~~d~~wk-~~v~~i~~~~~e~--------t~gs~iE 702 (780)
.+.. +| ...+||.-|+.|+++. +..|..- ...++..|. +.+++.+..+... .++...+
T Consensus 821 ~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q 900 (1050)
T TIGR02468 821 FLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEE 900 (1050)
T ss_pred HHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceec
Confidence 8854 33 2358999999998862 1223210 012345673 3466555544432 1334444
Q ss_pred cccce--EEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEE--EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 703 IKESA--LVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVK--RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 703 ~k~~~--l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~--~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
..+.+ ....|.-.|++... ..+++...|+. ....+.++ ++..+++|.|..+|||.|+++|+.+||++...+.+
T Consensus 901 ~~~~q~~~k~SY~v~d~~~~~-~v~elr~~Lr~--~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~V 977 (1050)
T TIGR02468 901 DEESSTDHCYAFKVKDPSKVP-PVKELRKLLRI--QGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAV 977 (1050)
T ss_pred ChhhCCCceEEEEecCcccCc-cHHHHHHHHHh--CCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEE
Confidence 43322 33334312333211 23444444432 12234433 34589999999999999999999999999988854
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8.5e-30 Score=265.38 Aligned_cols=191 Identities=30% Similarity=0.438 Sum_probs=164.1
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEE
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgli 655 (780)
....+.+.|..+++|+|++||||||+++. +....|+++++++|++|+++++|.|+|+|||+..+++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 44567778999999999999999999975 44578899999999999999999999999999999999998 7899999
Q ss_pred ecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHh
Q 003999 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVL 735 (780)
Q Consensus 656 aenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l 735 (780)
||||+++|..++.-|.......+..|++.+..++++|.+++||+++|.|+.++.||||+++++.+..++...... .
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~----~ 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT----L 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh----c
Confidence 999999998877777876666677899999999999999999999999999999999999776543332222211 2
Q ss_pred cCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCC
Q 003999 736 ANEP-AVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRA 773 (780)
Q Consensus 736 ~~~~-v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~ 773 (780)
.+.. +.++.|+..||++|.++|||.+++++++....+.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~ 198 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDG 198 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCC
Confidence 2333 8899999999999999999999999999887764
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.96 E-value=5.8e-30 Score=267.17 Aligned_cols=185 Identities=38% Similarity=0.567 Sum_probs=135.6
Q ss_pred EeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEe
Q 003999 595 FLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET 672 (780)
Q Consensus 595 ~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~ 672 (780)
||||||||.|+.+ ....|+++++++|++|+++++|.|+|+|||+.+.++ .|..+++++++||||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~-~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLE-RFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHH-HH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhH-HhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999763 446788999999999999999999999999999954 4556789999999999999998777876
Q ss_pred cCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCC-CeEEEEcCeEEEE
Q 003999 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE-PAVVKRGQHIVEV 751 (780)
Q Consensus 673 ~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~-~v~v~~g~~~vEI 751 (780)
.....+..|++.+.++++.+.+++||++||.|+++++||||+++++|+..+++++.+++.+.+... ++.+..|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444556789999999999999999999999999999999999999999999999999999877765 8999999999999
Q ss_pred EeCCCCHHHHHHHHHHHcCCC----CCccccCC
Q 003999 752 KPQVLRPSSISVSLSLSVCVR----ARACKLDD 780 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~----~~~~~~~~ 780 (780)
+|.+++||.|+++|++.++.. --.+++||
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GD 192 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGD 192 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEES
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecC
Confidence 999999999999999999875 34455544
No 15
>PLN02580 trehalose-phosphatase
Probab=99.94 E-value=1.2e-25 Score=245.36 Aligned_cols=189 Identities=23% Similarity=0.274 Sum_probs=150.8
Q ss_pred HHHHhccCceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccE
Q 003999 584 SAYRKTERRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ 661 (780)
.+|.+++++++||||||||.|+. +....++++++++|++|+++ ..|+|||||+++.|+++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 37899999999999999999976 34567899999999999997 36999999999999999975 579999999999
Q ss_pred EeeCCC----CceEec-------------CCCcChhHHHHHHHHHHH---HHhcCCCceeecccceEEEeeccCCCCccc
Q 003999 662 IRWNKT----SEWETN-------------HLGADLEWKKIVEPVMRS---YTEATDGSNIEIKESALVWHHQDADPDFGS 721 (780)
Q Consensus 662 ir~~~~----~~w~~~-------------~~~~d~~wk~~v~~i~~~---~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~ 721 (780)
++.+.+ ..|..+ .. ...+|.+.+.++++. ++++++|+++|.|..+++||||+++++++.
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~-~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~ 267 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ-PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWP 267 (384)
T ss_pred eecCCCCcccccccccccccccccccccccc-cchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHH
Confidence 986421 122211 11 145688777777666 455679999999999999999999877654
Q ss_pred ccHHHHHHHHHHHhcCCC-eEEEEcCeEEEEEe-CCCCHHHHHHHHHHHcCCCCCc----cccCC
Q 003999 722 CQAKELLDHLESVLANEP-AVVKRGQHIVEVKP-QVLRPSSISVSLSLSVCVRARA----CKLDD 780 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~-v~v~~g~~~vEI~p-~gvsKG~al~~Ll~~l~i~~~~----~~~~~ 780 (780)
.++.+ +..++.+.+ +.+..|+.++||+| .++|||.|+++|++.++++..+ +++||
T Consensus 268 ~~~~~----l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD 328 (384)
T PLN02580 268 LVAQC----VHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD 328 (384)
T ss_pred HHHHH----HHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC
Confidence 44444 344445554 88999999999999 5999999999999999998763 46666
No 16
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.93 E-value=1.9e-25 Score=234.43 Aligned_cols=186 Identities=27% Similarity=0.389 Sum_probs=152.8
Q ss_pred ccCceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCC
Q 003999 589 TERRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~ 666 (780)
|++++|+|||||||++.. +....|+++++++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 578999999999999964 3446688999999999999999999999999998887665 3478999999999998643
Q ss_pred CC-ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccC-CCCcccccHHHHHHHHHHHhcCCCeEEEE
Q 003999 667 TS-EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA-DPDFGSCQAKELLDHLESVLANEPAVVKR 744 (780)
Q Consensus 667 ~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~a-d~d~~~~qa~el~~~L~~~l~~~~v~v~~ 744 (780)
.. .|... ......|++.+.++++++.++ ||+++|.|+.+++||||.+ |++++..|+.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 22 46543 222247998899999999887 9999999999999999999 88887777777665543 344788999
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc-ccCC
Q 003999 745 GQHIVEVKPQVLRPSSISVSLSLSVCVRARAC-KLDD 780 (780)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~-~~~~ 780 (780)
|+.++|++|.++|||.+++++++.+++++..| ++||
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD 191 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGD 191 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcC
Confidence 99999999999999999999999999876443 3443
No 17
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.93 E-value=7.5e-25 Score=243.64 Aligned_cols=301 Identities=15% Similarity=0.151 Sum_probs=208.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL 253 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll 253 (780)
...+..|...++.++.++....+ .|+||+|+++.+.++...+. .++|++++.|+++.... .. ....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~~---~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-RR---VWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-HH---HHHHHHHHHH
Confidence 45678888888888765333333 49999999998777666543 36789999999875321 00 1122233344
Q ss_pred cCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--
Q 003999 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (780)
Q Consensus 254 ~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-- 331 (780)
.+|.+.+.+.++++.+ +..+ ++ ++|+|||+...... +...+....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 6787777664322111 1112 23 89999997542211 11122344566666
Q ss_pred -CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
+++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.+..+. . .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~----~--~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEG----D--P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCC----C--C
Confidence 478999999999999999999999999988888876 8888854321 12222222 222222211 1 1
Q ss_pred cEEEecCC-CCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-
Q 003999 411 PVVLIDRP-VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (780)
Q Consensus 411 pV~~~~~~-v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (780)
.|.++... ++.+++.++|++||+|++||.+||||++++|||||| .|+|+|..+|..+.+
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-------------------~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-------------------KPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-------------------CCEEEcCCCCchhhcc
Confidence 36666543 489999999999999999999999999999999997 489999999988877
Q ss_pred C--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 489 S--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 489 ~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
+ .|++++ +.+++|++|.++++++ ++++.+.++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3 378877 4678999999999875 45666667788877 569999999998877654
No 18
>PLN02151 trehalose-phosphatase
Probab=99.93 E-value=3e-25 Score=239.60 Aligned_cols=187 Identities=21% Similarity=0.292 Sum_probs=153.1
Q ss_pred HhccCceEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEee
Q 003999 587 RKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRW 664 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~ 664 (780)
.++++++||+||||||+|+.+ ....++++++++|++|+++ ..|+|+|||++..+.++++ +++++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--FPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC--CCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 567889999999999998753 3457899999999999974 6899999999999999997 4689999999999987
Q ss_pred CC-CCceEe----cCCCcChhHHHHHHHHHHHHH---hcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhc
Q 003999 665 NK-TSEWET----NHLGADLEWKKIVEPVMRSYT---EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA 736 (780)
Q Consensus 665 ~~-~~~w~~----~~~~~d~~wk~~v~~i~~~~~---e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~ 736 (780)
++ +..|+. .....+.+|.+.+.++++.+. +++||+++|.|..+++||||+++++ ++.++.+++.+++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 64 335641 111235578888888877654 6799999999999999999999765 33567788888887
Q ss_pred CCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHcCCCCC----ccccCC
Q 003999 737 NEP-AVVKRGQHIVEVKPQ-VLRPSSISVSLSLSVCVRAR----ACKLDD 780 (780)
Q Consensus 737 ~~~-v~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~i~~~----~~~~~~ 780 (780)
+.+ +.+..|++.+||+|. ++|||.|+++|++.++..-. -+++||
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGD 296 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGD 296 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcC
Confidence 766 789999999999995 99999999999999887643 366665
No 19
>PLN02939 transferase, transferring glycosyl groups
Probab=99.93 E-value=1.9e-23 Score=246.66 Aligned_cols=319 Identities=15% Similarity=0.151 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHh-----cCCCcEEEEEeCC-----CCChhHhhc--CC
Q 003999 177 WQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSP-----FPSSEIYRT--LP 243 (780)
Q Consensus 177 w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~~~--lp 243 (780)
...|.-+.+..++.+... .+| ||||+||||..++|.++.+. +.++++.|++|.- ||.. .+.. +|
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~-~l~~lGL~ 666 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPAS-DLASCGLD 666 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHH-HHHHcCCC
Confidence 344554445555444332 244 89999999999985554432 4568999999965 3322 2221 22
Q ss_pred Ch---------------HHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCC
Q 003999 244 VR---------------DEIL-RGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVH 307 (780)
Q Consensus 244 ~r---------------~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId 307 (780)
+. --++ .|+..||.|..-++.|++.-++ ..--|++. .+..+..++.++|+|||
T Consensus 667 ~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID 735 (977)
T PLN02939 667 VHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGID 735 (977)
T ss_pred HHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEeccee
Confidence 11 1122 4677899999999999988664 11111111 12234567889999999
Q ss_pred chhhhhhcCC-----------chhHHHHHHHHHHcC------CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCce
Q 003999 308 MGRLESVLNL-----------PATATKIKEIEKQFD------GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKV 370 (780)
Q Consensus 308 ~~~~~~~~~~-----------~~~~~~~~~lr~~~~------~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~v 370 (780)
.+.|.+.... .........+++++. +.++|++|||+++.||+..+++|+.++++ ++.
T Consensus 736 ~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv---- 809 (977)
T PLN02939 736 TDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG---- 809 (977)
T ss_pred hhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----
Confidence 9988764210 001122355778872 35899999999999999999999998875 343
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea 450 (780)
.||++|. |++ ..++.++..++.+++.. ..|.|+ +.++..+...+|+.||+||+||.+|||||+++||
T Consensus 810 qLVIvGd-----Gp~-~~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA 876 (977)
T PLN02939 810 QFVLLGS-----SPV-PHIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA 876 (977)
T ss_pred EEEEEeC-----CCc-HHHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence 4777773 322 13455667777665321 136654 4567777789999999999999999999999999
Q ss_pred hhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C-----------CcEEECCCCHHHHHHHHHHHHcC---CHH
Q 003999 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S-----------GAIRVNPWDIDAVADAMTLAINM---RDS 515 (780)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~aL~m---~~~ 515 (780)
|+|| .|+|++..+|+.+.+ + +|++++|.|+++++++|.+++.. .++
T Consensus 877 MAyG-------------------tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe 937 (977)
T PLN02939 877 MRYG-------------------SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPE 937 (977)
T ss_pred HHCC-------------------CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHH
Confidence 9996 478899999988766 1 48999999999999999999862 333
Q ss_pred HHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHH
Q 003999 516 EKQLRHEKHYRYVSTHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 516 er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
.++.+.++. ....++|...++.+++-..++..
T Consensus 938 ~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 938 VWKQLVQKD--MNIDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred HHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 333322222 23678999999998877766543
No 20
>PLN03017 trehalose-phosphatase
Probab=99.93 E-value=1.1e-24 Score=235.76 Aligned_cols=188 Identities=21% Similarity=0.258 Sum_probs=151.1
Q ss_pred HHHhccCceEEeCCCCCCCCCCC-CC-CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEE
Q 003999 585 AYRKTERRAIFLDYDGTVVPETS-II-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI 662 (780)
Q Consensus 585 ~y~~a~~rlI~lD~DGTL~~~~~-~~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~i 662 (780)
++.+.++++||+||||||+|+.. .+ ..++++++++|++|++ ++.|+|+|||++..+.++++. .+++++++||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l-~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKL-AELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcc-cCceEEEcCCcEE
Confidence 34566889999999999998664 23 3799999999999994 689999999999999999754 5789999999999
Q ss_pred eeCCCCceEe-------cCCCcChhHHHHHHHH---HHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHH
Q 003999 663 RWNKTSEWET-------NHLGADLEWKKIVEPV---MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE 732 (780)
Q Consensus 663 r~~~~~~w~~-------~~~~~d~~wk~~v~~i---~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~ 732 (780)
+.+.+ .|.. .......+|++.+.++ ++.+++++||++||+|..+++||||++|++ .+.++..++.
T Consensus 182 ~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVR 256 (366)
T ss_pred ecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHH
Confidence 97643 3321 0011234577777777 455677899999999999999999999764 3467778888
Q ss_pred HHhcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHcCCCCC----ccccCC
Q 003999 733 SVLANEP-AVVKRGQHIVEVKPQ-VLRPSSISVSLSLSVCVRAR----ACKLDD 780 (780)
Q Consensus 733 ~~l~~~~-v~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~i~~~----~~~~~~ 780 (780)
.++++.+ +.+..|+..+||+|. ++|||.|+++|++.++.... -+++||
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGD 310 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGD 310 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCC
Confidence 8888776 789999999999995 99999999999999987643 466665
No 21
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.93 E-value=9.2e-24 Score=242.20 Aligned_cols=294 Identities=19% Similarity=0.228 Sum_probs=199.2
Q ss_pred CCEEEEeCCccchHHHHHHHhc----CCCcEEEEEeCCCC----ChhHhhcC--CC-------------hHHHHHhhhcC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRF----NRIKLGFFLHSPFP----SSEIYRTL--PV-------------RDEILRGLLNC 255 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~~~~l--p~-------------r~eil~~ll~~ 255 (780)
-|+||.||||-.++|.++++++ .+++++++.|..-. ..+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 3999999999999999998763 46899999998621 11111111 10 01122346678
Q ss_pred CEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEE--EcCeEEEEEEeecCCCchhhhhhcCC-----------chhHH
Q 003999 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMGRLESVLNL-----------PATAT 322 (780)
Q Consensus 256 Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~ 322 (780)
|.|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+.... ....+
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 88877777766544320 0000 000 11134478899999999988753210 01112
Q ss_pred HHHHHHHHcC----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 003999 323 KIKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 323 ~~~~lr~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 398 (780)
..+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+.+|. |+ ..++++++++++
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHHH
Confidence 2345777772 578999999999999999999999998754 3 34777763 22 124456666665
Q ss_pred HHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV 478 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (780)
+.+. .|.++.+. +.+....+|+.||++|+||.+||||++.+|||+|| .|+|+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G-------------------~p~V~ 385 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG-------------------TLPIV 385 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC-------------------CCEEE
Confidence 5431 25555443 55667799999999999999999999999999996 48899
Q ss_pred cCCCCccccC-CC--------cEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 479 SEFIGCSPSL-SG--------AIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 479 Se~~G~~~~l-~~--------al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
|..+|+.+.+ ++ |++|+|.|+++++++|.++++.. ++.++.+.++.. ...+++..-++++++-.+++
T Consensus 386 ~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 386 RRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred eCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999999887 33 89999999999999999998732 222222222222 25688888888887666554
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.93 E-value=2.7e-23 Score=232.22 Aligned_cols=269 Identities=19% Similarity=0.272 Sum_probs=199.9
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
.|+|+||+.. .+...+++++|++++.+.+|..|. ++. + -.++.|.+.+. +.+.++.. .+
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~----------~---~~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PEL----------L---DKNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhH----------h---ccCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 344667888999999999998763 111 1 13577776665 33333321 01
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCChHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLA 355 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi~~~l~A 355 (780)
...++.++|+|||...|.+.. ...+++++ +++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 112468899999988876421 12234444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceee
Q 003999 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCI 435 (780)
Q Consensus 356 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 435 (780)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .|+ +.+.++.+++.++|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334566677777665532 255 456789999999999999999
Q ss_pred eccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcE-EECCCCHHHHHHHHHHHH
Q 003999 436 VNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAI-RVNPWDIDAVADAMTLAI 510 (780)
Q Consensus 436 vtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al-~VnP~d~~~~A~ai~~aL 510 (780)
+||. .||||++++|||||| .|+|+|..+|..+.+ + .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G-------------------~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAG-------------------KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHcC-------------------CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 599999999999997 489999998888877 3 365 678999999999999999
Q ss_pred cCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 511 NMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 511 ~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
++++ +..+.++.++++ .++++..-++++++.++.
T Consensus 343 ~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9875 344556677665 668999999998887764
No 23
>PLN02316 synthase/transferase
Probab=99.92 E-value=3.7e-23 Score=248.42 Aligned_cols=308 Identities=13% Similarity=0.096 Sum_probs=217.9
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHh-----cCCCcEEEEEeCCCCChhHhhcCCChHHHH
Q 003999 176 LWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSPFPSSEIYRTLPVRDEIL 249 (780)
Q Consensus 176 ~w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~~~lp~r~eil 249 (780)
+...|.-+++..++.+... .+| ||||+||+|-.++|.++++. +.+++++++.|..-- ....+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHH
Confidence 3455555566665554432 234 99999999999999999875 356899999996421 112234
Q ss_pred HhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC--c-----h---
Q 003999 250 RGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--P-----A--- 319 (780)
Q Consensus 250 ~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~--~-----~--- 319 (780)
.++..||.|.-.+..|++..+.. ..+ ..+..++.++|+|||++.|.+.... | +
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~----~~l-------------~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN----SAI-------------APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc----cCc-------------ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999999999888776531 000 1123468899999999987653210 0 0
Q ss_pred --hHHHHHHHHHHcC----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHH
Q 003999 320 --TATKIKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKET 393 (780)
Q Consensus 320 --~~~~~~~lr~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei 393 (780)
.......+++++. +.++|++|+||++.||+..+++|+.++++. +. .||++|. |++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~~----qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--NG----QVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--Cc----EEEEEeC-----CCC-HHHHHHH
Confidence 0122345777772 578999999999999999999999999863 33 3666663 333 2456677
Q ss_pred HHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCC
Q 003999 394 YLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHT 473 (780)
Q Consensus 394 ~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~ 473 (780)
.+++.+++..+.. .|.+.. ..+......+|++||+||+||..|||||+.+|||+||
T Consensus 888 ~~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G------------------- 943 (1036)
T PLN02316 888 VNLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG------------------- 943 (1036)
T ss_pred HHHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC-------------------
Confidence 8888777544321 355543 3444333579999999999999999999999999996
Q ss_pred ceEEEcCCCCccccC-C---------------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHH
Q 003999 474 SMLVVSEFIGCSPSL-S---------------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYW 536 (780)
Q Consensus 474 g~lV~Se~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W 536 (780)
.|+|+|..+|..+.+ + +|++|+|.|++++++||.++|......+....+..++.+ ..++|..-
T Consensus 944 tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~ 1023 (1036)
T PLN02316 944 SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRP 1023 (1036)
T ss_pred CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHH
Confidence 478889999999887 2 389999999999999999999875322222233344444 45899998
Q ss_pred HHHHHHHHHHH
Q 003999 537 ARSFAQDLERA 547 (780)
Q Consensus 537 a~~~l~~l~~~ 547 (780)
|+.+++-.+++
T Consensus 1024 A~~Y~~LY~~a 1034 (1036)
T PLN02316 1024 ALDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHHH
Confidence 99888766654
No 24
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.92 E-value=2.8e-23 Score=236.45 Aligned_cols=297 Identities=16% Similarity=0.106 Sum_probs=189.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChh--Hhh------------cCCChHHH-HHhhhcCCEEEeecH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE--IYR------------TLPVRDEI-LRGLLNCDLIGFHTF 263 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~~------------~lp~r~ei-l~~ll~~Dligf~t~ 263 (780)
-|+||+|+++..++..++++.. ++|++++.|....... +.. .++.+-.+ ...+..+|.|...+.
T Consensus 115 ~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 193 (439)
T TIGR02472 115 PDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTH 193 (439)
T ss_pred CCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCH
Confidence 3999999988777777776654 6799999997532210 000 00111001 122345676665554
Q ss_pred HHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEec
Q 003999 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGID 341 (780)
Q Consensus 264 ~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vd 341 (780)
..++.-+. ...+ -...++.++|+|||++.|.+....++.......+++.. +++++|++||
T Consensus 194 ~~~~~~~~---~~~~---------------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 194 QEIEEQYA---LYDS---------------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHHHHH---hccC---------------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc
Confidence 32221110 0001 12346889999999999875422111111112222222 4678999999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEc-CCCCChhH-HHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN-PARGSGKD-VQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 342 rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~~-~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
|+++.||+..+++||.++.+..+.. ++++ .+|. +.+..... ..++.+++..+++++ +-.+ .|. +.+.+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~----~l~~--~V~-f~g~~ 325 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRY----DLYG--KVA-YPKHH 325 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHc----CCCc--eEE-ecCCC
Confidence 9999999999999998642211111 2333 2332 11111100 111223344444443 2222 255 56788
Q ss_pred CHHHHHHHHHhc----ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcE
Q 003999 420 PRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI 492 (780)
Q Consensus 420 ~~~el~aly~~A----Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al 492 (780)
+.+++.++|+.| |+||+||.+||||++++|||||| .|+|+|..+|+.+.+. +|+
T Consensus 326 ~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G-------------------~PvV~s~~gg~~eiv~~~~~G~ 386 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG-------------------LPIVATDDGGPRDIIANCRNGL 386 (439)
T ss_pred CHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC-------------------CCEEEeCCCCcHHHhcCCCcEE
Confidence 999999999988 99999999999999999999997 4899999999988873 489
Q ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHHHHH
Q 003999 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDL 544 (780)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l 544 (780)
+|+|.|++++|++|.+++++++ +++...++.++++. .+++..-++.+++-|
T Consensus 387 lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 387 LVDVLDLEAIASALEDALSDSS-QWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999998754 56666677787774 588888888776543
No 25
>PRK14098 glycogen synthase; Provisional
Probab=99.92 E-value=4.3e-23 Score=237.18 Aligned_cols=320 Identities=15% Similarity=0.151 Sum_probs=215.1
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHhc------CCCcEEEEEeCCC-----CChhHhhcC
Q 003999 175 VLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIYRTL 242 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~~~l 242 (780)
+....|.-.++..++.+.+. ++| |+||+||||-.++|.+++++. .++|++++.|... |...+-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34566776677766665432 345 899999999999999998764 4789999999853 211111113
Q ss_pred CCh------------HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchh
Q 003999 243 PVR------------DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGR 310 (780)
Q Consensus 243 p~r------------~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~ 310 (780)
|+. .-+-.++..||.|...++.|++.-.+....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235678899888888887764320000011110 00112457889999999998
Q ss_pred hhhhcCCc-----------hhHHHHHHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 311 LESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
|.+..... ........+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 87532100 0011234566665 2568999999999999999999999998752 3 44887
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|. |+. .+++++++++++. +. .|.+. +.++.+++..+|+.||+||+||..||||++.+|||+||
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~----~~----~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEH----PE----QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHC----CC----CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 873 221 2445666666553 21 26544 46788899999999999999999999999999999996
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC-------CcEEECCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHhh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-------GAIRVNPWDIDAVADAMTLAINMR-DSEKQLRHEKHYR 526 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~~~~ 526 (780)
.|+|++..+|+.+.+. +|++++|.|++++|++|.+++.+- ..++..++.+ ..
T Consensus 406 -------------------~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~-~~ 465 (489)
T PRK14098 406 -------------------TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVL-EA 465 (489)
T ss_pred -------------------CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH-HH
Confidence 4788899999887762 489999999999999999987431 1122222211 11
Q ss_pred HhhhCCHHHHHHHHHHHHHHH
Q 003999 527 YVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 527 ~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
..+.+++..-++.+++-.+++
T Consensus 466 ~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred hcCCCChHHHHHHHHHHHHHH
Confidence 235688888888887666554
No 26
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.91 E-value=1.4e-22 Score=233.03 Aligned_cols=292 Identities=18% Similarity=0.221 Sum_probs=201.0
Q ss_pred CCEEEEeCCccchHHHHHHHhcC--CCcEEEEEeCCCC----ChhHhhcCCCh--------------HH-HHHhhhcCCE
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFN--RIKLGFFLHSPFP----SSEIYRTLPVR--------------DE-ILRGLLNCDL 257 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~~~~lp~r--------------~e-il~~ll~~Dl 257 (780)
-|+||.||+|..++|.++++... ++|++++.|...+ +.+.+..+... -. +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 39999999999999999988765 3899999998642 12222222111 01 1234566788
Q ss_pred EEeecHHHHHHHHHHHHhhhCceeccCCceeEEE--EcCeEEEEEEeecCCCchhhhhhcCCc-----------hhHHHH
Q 003999 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMGRLESVLNLP-----------ATATKI 324 (780)
Q Consensus 258 igf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~~-----------~~~~~~ 324 (780)
|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 777777776655421 0000 010 011345788999999999887532100 011223
Q ss_pred HHHHHHcC-----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q 003999 325 KEIEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR 399 (780)
Q Consensus 325 ~~lr~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 399 (780)
..+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|. |+ .++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45777772 6789999999999999999999999987542 44777763 22 2344566666644
Q ss_pred HhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc
Q 003999 400 INEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (780)
Q Consensus 400 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (780)
. +. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|
T Consensus 344 ~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G-------------------~pvI~s 395 (473)
T TIGR02095 344 Y----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG-------------------TVPIVR 395 (473)
T ss_pred C----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC-------------------CCeEEc
Confidence 3 21 255443 4678888999999999999999999999999999997 489999
Q ss_pred CCCCccccC-C--------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHH
Q 003999 480 EFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 480 e~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
..+|..+.+ + .|++++|.|++++|++|.+++.+ .++.++.+.++.. .+.+++..-++.+++-.+
T Consensus 396 ~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 396 RTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred cCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999999888 3 38999999999999999999973 2222333222222 256888888888776544
No 27
>PRK14099 glycogen synthase; Provisional
Probab=99.91 E-value=1.8e-22 Score=231.81 Aligned_cols=294 Identities=19% Similarity=0.171 Sum_probs=193.8
Q ss_pred CEEEEeCCccchHHHHHHHh-cCCCcEEEEEeCC-----CCChhHhhc--CCCh-------------HHHHHhhhcCCEE
Q 003999 200 DCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSP-----FPSSEIYRT--LPVR-------------DEILRGLLNCDLI 258 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~~~--lp~r-------------~eil~~ll~~Dli 258 (780)
||||+||||..++|.+++.+ ..+++++++.|.. ||. ..+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 99999999999999998753 2467899999975 321 11111 1110 0123345667877
Q ss_pred EeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCc-----------hhHHHHHHH
Q 003999 259 GFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLP-----------ATATKIKEI 327 (780)
Q Consensus 259 gf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-----------~~~~~~~~l 327 (780)
.-.+..|++...+.- .-.|++. .+..+..++.++|+|||.+.|.+..... ........+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 777776665543210 0001000 0011244788999999999887532100 001123456
Q ss_pred HHHcC-----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhh
Q 003999 328 EKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE 402 (780)
Q Consensus 328 r~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~ 402 (780)
++++. +.+++++|+|+++.||+..+++|+++++++ + +.||++|. |+ .++++++++++++.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~-- 348 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY-- 348 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC--
Confidence 67762 356888899999999999999999998753 3 34777773 22 13445566665442
Q ss_pred ccCCCCcccEEEecCCCCHHHHHHHH-HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC
Q 003999 403 VYGSPNYEPVVLIDRPVPRFEKSAYY-AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481 (780)
Q Consensus 403 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (780)
+. .++++.+. .+++..+| +.||+||+||.+||||++.+|||+|| .|+|+|..
T Consensus 349 --~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G-------------------~ppVvs~~ 401 (485)
T PRK14099 349 --PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG-------------------AVPVVARV 401 (485)
T ss_pred --CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC-------------------CCcEEeCC
Confidence 21 25444454 57888877 57999999999999999999999996 36777998
Q ss_pred CCccccC-C-----------CcEEECCCCHHHHHHHHHHH---HcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 482 IGCSPSL-S-----------GAIRVNPWDIDAVADAMTLA---INMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 482 ~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~a---L~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
+|..+.+ + .|++|+|.|++++|++|.++ ++.+ +.++...++.+ .+.++|..-++.+++-.++
T Consensus 402 GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~-~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 402 GGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADP-VAWRRLQRNGM--TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred CCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCH-HHHHHHHHHhh--hhcCChHHHHHHHHHHHHH
Confidence 8988876 2 38999999999999999985 4333 23333333332 3678888888888877766
Q ss_pred HHH
Q 003999 547 ACR 549 (780)
Q Consensus 547 ~~~ 549 (780)
+..
T Consensus 479 l~~ 481 (485)
T PRK14099 479 LVA 481 (485)
T ss_pred HHh
Confidence 543
No 28
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.91 E-value=5.5e-22 Score=222.83 Aligned_cols=287 Identities=17% Similarity=0.152 Sum_probs=208.3
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhc---CCC--hHHHH--HhhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT---LPV--RDEIL--RGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~---lp~--r~eil--~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999997666666666554 468899999975421111110 111 11222 1345789999999987777753
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
. .+. ...++.++|+|||.+.|.+. + ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPG----D----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCC----c----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 2 121 23467889999999887542 1 12234455 36789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCCh-hHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSG-KDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 427 (780)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. .++++++++.+.. ..|. +.+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHH
Confidence 999999999999988873 466888886442 23 332 3344555444321 1255 5578999999999
Q ss_pred HHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHH
Q 003999 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (780)
Q Consensus 428 y~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ 504 (780)
|+.||++++||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 360 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACG-------------------TPVVAARVGGLPVAVADGETGLLVDGHDPADWAD 360 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcC-------------------CCEEEecCCCcHhhhccCCceEECCCCCHHHHHH
Confidence 999999999999999999999999997 4889999988887773 389999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 505 AMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
+|.++++.++ ++....+..++++..+++...++.+++-+.++
T Consensus 361 ~i~~~l~~~~-~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 361 ALARLLDDPR-TRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999998653 45555566777888899999999888766653
No 29
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.90 E-value=3.7e-22 Score=224.08 Aligned_cols=288 Identities=15% Similarity=0.150 Sum_probs=195.3
Q ss_pred HcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCC--hhH-hh-cCCCh--------HH---HHHhhhcCCEE
Q 003999 194 VINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPS--SEI-YR-TLPVR--------DE---ILRGLLNCDLI 258 (780)
Q Consensus 194 ~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~~-~lp~r--------~e---il~~ll~~Dli 258 (780)
.++| |+|+.|. .+....++++.+|+++++.+.|..+-. .+. |. ..+.+ .. ....+-.+|.+
T Consensus 85 ~~~p--dvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 85 GFRP--DVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred CCCC--CEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 3455 8999994 556666899999999998777643311 110 10 11111 11 22446678888
Q ss_pred EeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCe
Q 003999 259 GFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKK 335 (780)
Q Consensus 259 gf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~ 335 (780)
...+......|.+ .. ..++.++|+|||.+.|.+... . ...++... ++++
T Consensus 161 i~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~~ 212 (396)
T cd03818 161 VSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGDE 212 (396)
T ss_pred ECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCch---h---hhcccccccCCCCCe
Confidence 7776644433321 01 136889999999998875321 1 11122221 4678
Q ss_pred EEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 003999 336 LILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (780)
Q Consensus 336 vil~Vdr-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~ 414 (780)
+|++++| +.+.||+..+++|+.++.+++|+++ |+++|....+.+..........+++.++++.+.+. ..|+|
T Consensus 213 ~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~V~f 285 (396)
T cd03818 213 VITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---SRVHF 285 (396)
T ss_pred EEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc---ceEEE
Confidence 9999998 9999999999999999999999877 88888532111100000000112223333322121 23664
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---Cc
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA 491 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (780)
.|.++.+++.++|+.||++++||..||+|++++|||||| .|+|+|..+|..+.+. .|
T Consensus 286 -~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G-------------------~PVIas~~~g~~e~i~~~~~G 345 (396)
T cd03818 286 -LGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG-------------------CLVVGSDTAPVREVITDGENG 345 (396)
T ss_pred -eCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC-------------------CCEEEcCCCCchhhcccCCce
Confidence 578999999999999999999999999999999999997 4899999988888883 48
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHH
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFA 541 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l 541 (780)
++++|.|++++|++|.+++++++ ++....++.++++.+ +++...+++++
T Consensus 346 ~lv~~~d~~~la~~i~~ll~~~~-~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 346 LLVDFFDPDALAAAVIELLDDPA-RRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999998764 566666778888877 77666666554
No 30
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.90 E-value=8.6e-22 Score=221.95 Aligned_cols=274 Identities=19% Similarity=0.124 Sum_probs=197.7
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCcEEEEEeCCCCCh-hHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhh
Q 003999 199 DDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPSS-EIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRM 276 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~-e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~ 276 (780)
-|+|+.|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 499999988776666777763 22456788899753211 1110 11112223344689888777654443321
Q ss_pred hCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHH
Q 003999 277 LGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAM 356 (780)
Q Consensus 277 l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~ 356 (780)
+|. ...+|.++|+|||.+.|..... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1235788999999998854211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeee
Q 003999 357 EQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIV 436 (780)
Q Consensus 357 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 436 (780)
+.+.+++|+++ |+.+| +|+.. +++++++++.+. ...+.+.|.++.+|+.++|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 87777 34433 344555544321 123446689999999999999999999
Q ss_pred ccCC------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHH
Q 003999 437 NAVR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMT 507 (780)
Q Consensus 437 tS~r------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (780)
||.. |||+++.+|||||| .|+|+|..+|+.+.+. +|++|+|.|++++|++|.
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G-------------------~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVG-------------------IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCC-------------------CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 9984 99999999999997 4899999999988873 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHH
Q 003999 508 LAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLE 545 (780)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~ 545 (780)
+++++.+++++.+.++.++++ ..+++...++.+.+-++
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999966666777777788887 45899988888776654
No 31
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.90 E-value=1.9e-22 Score=214.02 Aligned_cols=180 Identities=18% Similarity=0.210 Sum_probs=142.0
Q ss_pred CceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~ 668 (780)
+++|++||||||++.. +.++.++++++++|++|++++|+.|+|+|||++..+.++++.+ .+.++++||++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~- 91 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING- 91 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC-
Confidence 6899999999999854 2356789999999999998779999999999999999999876 57799999999987654
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHH-HHhcCCC-eEEEEcC
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE-SVLANEP-AVVKRGQ 746 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~-~~l~~~~-v~v~~g~ 746 (780)
.|.. ...+.+|.+.+...++.+.+++||+++|.|+.+++|||+.++ + .++.+..+. .+.+..+ +.+.+|+
T Consensus 92 ~~~~--~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~-----~~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 92 KTHI--VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-Q-----HEDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred Ceee--ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-c-----cHHHHHHHHHHHHhhCCceEEeCCC
Confidence 3432 234556666677777777888999999999999999999873 2 123333333 2222333 6678899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc-cCC
Q 003999 747 HIVEVKPQVLRPSSISVSLSLSVCVRARACK-LDD 780 (780)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~-~~~ 780 (780)
.++||+|+|+|||.|+++|++.++++.+++. .||
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD 198 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGD 198 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcC
Confidence 9999999999999999999999998875543 444
No 32
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=1.4e-21 Score=219.65 Aligned_cols=280 Identities=15% Similarity=0.131 Sum_probs=197.2
Q ss_pred HcCCCCCEEEEeCCccchH-HHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHHHHH
Q 003999 194 VINPDDDCVWVHDYHLMVL-PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 194 ~~~~~~DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~Fl~ 271 (780)
..+| |+|++|+++.... ...+-.+..++|++++.|..|+..+... .+...+.+. +-.+|.+.+.+....+++..
T Consensus 86 ~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 161 (398)
T cd03796 86 RERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVL 161 (398)
T ss_pred hcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHH
Confidence 3355 9999999875543 2333334456899999998765332211 111223333 34688888888866555432
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHH
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~ 351 (780)
. .+ ....++.++|+|+|.+.|.+... . ..+++++|+++||+++.||+..
T Consensus 162 ~----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~ 210 (398)
T cd03796 162 R----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDL 210 (398)
T ss_pred H----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHH
Confidence 1 01 11346788999999988864211 0 1256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
+++|+..+.+++|+++ |+.+|. ++..+ ++++++++. |..+ .|.+ .|.++.+++.++|+.|
T Consensus 211 li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~l~~~~~~~----~l~~--~v~~-~G~~~~~~~~~~l~~a 270 (398)
T cd03796 211 LVGIIPEICKKHPNVR----FIIGGD-----GPKRI----LLEEMREKY----NLQD--RVEL-LGAVPHERVRDVLVQG 270 (398)
T ss_pred HHHHHHHHHhhCCCEE----EEEEeC-----CchHH----HHHHHHHHh----CCCC--eEEE-eCCCCHHHHHHHHHhC
Confidence 9999999988888876 777763 33333 344444443 2211 2664 4789999999999999
Q ss_pred ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CC-cEEECCCCHHHHHHHHHHH
Q 003999 432 ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG-AIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 432 Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~-al~VnP~d~~~~A~ai~~a 509 (780)
|++++||..||||++.+|||||| .|+|+|..+|..+.+ ++ +++++| |.++++++|.++
T Consensus 271 d~~v~pS~~E~~g~~~~EAma~G-------------------~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~ 330 (398)
T cd03796 271 HIFLNTSLTEAFCIAIVEAASCG-------------------LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEA 330 (398)
T ss_pred CEEEeCChhhccCHHHHHHHHcC-------------------CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHH
Confidence 99999999999999999999997 489999999988877 34 445555 999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
+.++.+.+ ...+..++.+ ..+++..-++++++.++++..
T Consensus 331 l~~~~~~~-~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 331 ISILRTGK-HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HhChhhhh-hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99765433 3344555544 568999999999888877643
No 33
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.89 E-value=5.1e-21 Score=225.47 Aligned_cols=337 Identities=11% Similarity=0.143 Sum_probs=209.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCC----CChhH-hhcC------C
Q 003999 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEI-YRTL------P 243 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~-~~~l------p 243 (780)
+.|..-..++...++.+.......-|+|+.|.+.--+++..++++. +++..++.|+.= +.+.. +... .
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4676666666666666654433223999999888778888887765 688888888651 11111 0001 0
Q ss_pred Ch-HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceec-cCCcee----EEEEcCeEEEEEEeecCCCchhhhhhcCC
Q 003999 244 VR-DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYE-SKRGHI----GLDYFGRTVYIKILPVGVHMGRLESVLNL 317 (780)
Q Consensus 244 ~r-~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~-~~~g~~----~~~~~gr~~~i~i~P~GId~~~~~~~~~~ 317 (780)
.+ ..-+..|-.||.|.-.|+.-...-...+.. .+.... +-.+.. ++++. ..++.++|+|+|+..|.+....
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~--~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVF--DPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCC--cCCeEEECCCcChhhcCCCCch
Confidence 01 001245667999988886432211111000 000000 000111 11111 2378999999999988764221
Q ss_pred chh-HHHH----------HHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCC
Q 003999 318 PAT-ATKI----------KEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381 (780)
Q Consensus 318 ~~~-~~~~----------~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (780)
... .... ...++.+ +++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~ 593 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDA 593 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccc
Confidence 100 0000 1112333 478999999999999999999999987644333 3558888864321
Q ss_pred ---ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH----hcceeeeccCCcCCCcchhhhhhcc
Q 003999 382 ---SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA----VAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 382 ---~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~----~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
...+..+..+++.+++++.+ -.+ .|.+++...+..+...+|+ .+||||+||.+|||||+++||||||
T Consensus 594 ~~s~d~ee~~~i~~L~~la~~~g----L~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG 667 (784)
T TIGR02470 594 KESKDREEQAEIEKMHNLIDQYQ----LHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG 667 (784)
T ss_pred ccccchhHHHHHHHHHHHHHHhC----CCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC
Confidence 11111223345566665543 222 3766543345566666665 2479999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhHh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLRHEKHYRYV 528 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~V 528 (780)
.|+|+|..+|+.+.+ + .|++|+|.|++++|++|.++++ ..++.+....+..+++|
T Consensus 668 -------------------lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV 728 (784)
T TIGR02470 668 -------------------LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRI 728 (784)
T ss_pred -------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 489999999999988 3 4999999999999999999873 23334555556667777
Q ss_pred -hhCCHHHHHHHHHHHH
Q 003999 529 -STHDVAYWARSFAQDL 544 (780)
Q Consensus 529 -~~~~~~~Wa~~~l~~l 544 (780)
+.++|...++.+++-+
T Consensus 729 ~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 729 YEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 5689999888877544
No 34
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.89 E-value=1.5e-21 Score=223.92 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=200.1
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH----HHHHhh-hcCCEEEeecHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD----EILRGL-LNCDLIGFHTFDYA 266 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~----eil~~l-l~~Dligf~t~~y~ 266 (780)
++..+| |+||+|+...+.++.++-.+..++|+++.+|.-+|..--....++.. .+.+.+ -.+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 344555 89999997766655554333457899999997654321100111100 112222 25788888887766
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc----CCCeEEEEecc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF----DGKKLILGIDD 342 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~----~~~~vil~Vdr 342 (780)
+.+.. .+. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 65542 111 012367889999999988653211 1233333 46789999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHH
Q 003999 343 MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (780)
Q Consensus 343 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~ 422 (780)
+.+.||+..+++|++++ |+++ |+++| +|+.. ++++++++. .+|+ +.|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~----------~~V~-f~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAG----------TPTV-FTGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhcc----------CCeE-EeccCCHH
Confidence 99999999999888653 6554 88776 34433 334444432 1366 45789999
Q ss_pred HHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C-----CcEEECC
Q 003999 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S-----GAIRVNP 496 (780)
Q Consensus 423 el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~-----~al~VnP 496 (780)
++..+|+.||++|+||..||||++++|||||| .|+|+|..+|+.+.+ + +|++++|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-------------------~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASG-------------------VPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcC-------------------CCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 99999999999999999999999999999997 489999999988776 3 2899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH-HHHHHHhh
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD-LERACRDH 551 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~-l~~~~~~~ 551 (780)
.|++++|++|.++++.+ +.++.+.+..++++.++++...++.++.. ..++...+
T Consensus 385 ~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 385 GDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999865 34556666788889999999999999874 55555443
No 35
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.89 E-value=1.9e-21 Score=223.53 Aligned_cols=310 Identities=17% Similarity=0.203 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHhc-----CCCcEEEEEeCCCCCh----hHhhcC--CC-
Q 003999 178 QAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF-----NRIKLGFFLHSPFPSS----EIYRTL--PV- 244 (780)
Q Consensus 178 ~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~~~l--p~- 244 (780)
..|.-.++...+.+.+. .+| |+||+||+|..++|.++++.+ .++|++|+.|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444445444444332 234 999999999999999998874 5889999999874321 111111 11
Q ss_pred ------------h-HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEE--EcCeEEEEEEeecCCCch
Q 003999 245 ------------R-DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMG 309 (780)
Q Consensus 245 ------------r-~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--~~gr~~~i~i~P~GId~~ 309 (780)
. .-+..++..||.|...+..|++..++.- .| .+++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~-~gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FG-EGLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CC-cchHHHHHhccCCeEEEeCCCcCc
Confidence 0 1223346678888777777766554210 00 0000 111235788999999999
Q ss_pred hhhhhcCCc-----------hhHHHHHHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEE
Q 003999 310 RLESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLV 373 (780)
Q Consensus 310 ~~~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 373 (780)
.|.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.++. +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 887542210 0112334566766 46889999999999999999999999987643 4477
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhc
Q 003999 374 QIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (780)
Q Consensus 374 qi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac 453 (780)
.+|.. + .++.+++.+++.+.. ..|+++.+ .+.++...+|+.||++++||..||||++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77632 1 133445555554431 13666654 45777789999999999999999999999999999
Q ss_pred ccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--------CcEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHH
Q 003999 454 RQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINMRD--SEKQLRHE 522 (780)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~--~er~~r~~ 522 (780)
| .|+|+|..+|..+.+ + +|++++|.|+++++++|.+++++.. +++....+
T Consensus 394 G-------------------~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 394 G-------------------TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred C-------------------CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 7 488999999999888 3 5999999999999999999986432 22222223
Q ss_pred HHhhHhhhCCHHHHHHHHHHHH
Q 003999 523 KHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 523 ~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
+..+ ..+++..-++++++-+
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHhc--cCCChHHHHHHHHHHH
Confidence 2222 3477777777766543
No 36
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.89 E-value=6.8e-21 Score=212.23 Aligned_cols=286 Identities=13% Similarity=0.128 Sum_probs=203.0
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhh-----cCCChHHH-HHhhhcCCEEEeecHHHHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-----TLPVRDEI-LRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~-----~lp~r~ei-l~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
+.|+||+|++...+.+.+++ +..+.|+++.+|..+|...... .......+ ...+..+|.|.+.+....+.+.+
T Consensus 83 ~~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 35999999988776655554 4468899999998765321100 00001111 12345688888888776666543
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
.- -+. ...++.++|+|+|...+.+.. ...+++++ +++++|+++||+.+.||
T Consensus 162 ~~---~~~---------------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg 215 (388)
T TIGR02149 162 YY---PDL---------------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKG 215 (388)
T ss_pred Hc---CCC---------------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccC
Confidence 10 011 134678899999998775421 12344444 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|++++. ++++ |+.+|.. ++..++.+++++.+..++... ..|+++.+.++.+++..+|
T Consensus 216 ~~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~ 278 (388)
T TIGR02149 216 VPHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELL 278 (388)
T ss_pred HHHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHH
Confidence 999999999873 3443 6655532 222334455666655554322 1377788889999999999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCH------
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDI------ 499 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~------ 499 (780)
+.|||+|+||..||||++.+|||+|| .|+|+|..+|..+.+. .|++++|.|.
T Consensus 279 ~~aDv~v~ps~~e~~g~~~lEA~a~G-------------------~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 279 SNAEVFVCPSIYEPLGIVNLEAMACG-------------------TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQ 339 (388)
T ss_pred HhCCEEEeCCccCCCChHHHHHHHcC-------------------CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchH
Confidence 99999999999999999999999997 4899999999888773 4899999998
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHH
Q 003999 500 DAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERA 547 (780)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~ 547 (780)
++++++|.++++.+ +++..+.++.++++ ..+++..+++++++-++++
T Consensus 340 ~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 340 AELAKAINILLADP-ELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999999865 34555556667766 5699999999988776653
No 37
>PLN00142 sucrose synthase
Probab=99.88 E-value=8.4e-21 Score=223.63 Aligned_cols=330 Identities=14% Similarity=0.140 Sum_probs=207.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCC----CCh--------hHhhc
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSS--------EIYRT 241 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~--------e~~~~ 241 (780)
.+.|..-.+++...++.+....+..-|+|+-|.+.--+++..|++++ +++.+++.|+-= +.+ +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777766654443123999999777778888888875 799999999531 111 11111
Q ss_pred C-CChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCc---------eeEEEEcCeEEEEEEeecCCCchhh
Q 003999 242 L-PVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG---------HIGLDYFGRTVYIKILPVGVHMGRL 311 (780)
Q Consensus 242 l-p~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g---------~~~~~~~gr~~~i~i~P~GId~~~~ 311 (780)
. ....|.+ .+..||.|.-.|+.-....-..+ + .|++-.+ ..+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 0 0111222 45567766655543221100000 0 0000000 0012222 1278889999999988
Q ss_pred hhhcCCchhHHHH-------H-------HHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEE
Q 003999 312 ESVLNLPATATKI-------K-------EIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVL 372 (780)
Q Consensus 312 ~~~~~~~~~~~~~-------~-------~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 372 (780)
.+... ...+. . ..++.+ +++++|++|+|+++.||+..+++||.++.+..+++ .|
T Consensus 535 ~P~~~---~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~L 607 (815)
T PLN00142 535 FPYTE---KQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NL 607 (815)
T ss_pred CCCCh---HHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EE
Confidence 75321 01110 0 011222 35779999999999999999999999886665554 48
Q ss_pred EEEEcCC-CCChhHHH--HHHHHHHHHHHHHhhccCCCCcccEEEecC---CCCHHHHHHHHH-hcceeeeccCCcCCCc
Q 003999 373 VQIVNPA-RGSGKDVQ--EAKKETYLTAKRINEVYGSPNYEPVVLIDR---PVPRFEKSAYYA-VAECCIVNAVRDGMNL 445 (780)
Q Consensus 373 vqi~~p~-r~~~~~~~--~l~~ei~~lv~~In~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~rEGmnL 445 (780)
|+||.+. .....+.+ +..+++.+++++.+ ..+ .|.++.. .++..+++.+|+ ++|+||+||.+||||+
T Consensus 608 VIVGgg~d~~~s~d~ee~~el~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 608 VVVGGFIDPSKSKDREEIAEIKKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred EEEECCccccccccHHHHHHHHHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 8888541 11111111 12234555655543 222 3665532 445678888777 5799999999999999
Q ss_pred chhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHHHHc---CCHHHHHH
Q 003999 446 VPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAIN---MRDSEKQL 519 (780)
Q Consensus 446 v~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~---m~~~er~~ 519 (780)
+++|||||| .|+|+|..+|+.+.+ + .|++|+|.|++++|++|.+++. ..++.++.
T Consensus 682 vvLEAMA~G-------------------lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 682 TVVEAMTCG-------------------LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred HHHHHHHcC-------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 999999997 489999999999888 3 4999999999999999987653 23444555
Q ss_pred HHHHHhhHh-hhCCHHHHHHHHHHHH
Q 003999 520 RHEKHYRYV-STHDVAYWARSFAQDL 544 (780)
Q Consensus 520 r~~~~~~~V-~~~~~~~Wa~~~l~~l 544 (780)
..+..++.+ +.++|...++++++-.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 556677777 5689999888877643
No 38
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.88 E-value=1.6e-20 Score=209.09 Aligned_cols=284 Identities=20% Similarity=0.190 Sum_probs=200.2
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhc-----CCC-hHHH-HHhhhcCCEEEeecHHHHHHHHHH
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT-----LPV-RDEI-LRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~-----lp~-r~ei-l~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
|+|++|++....++..+.+. .+++++++.|........... .+. +..+ ...+..+|.|.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 99999998877776666654 478999999976532111000 000 1111 223457999999888766665431
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
.+ ....++.++|+|+|.+.+...... .....++. ...++.+|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 11 112247889999999887643211 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 432 (780)
++|+..+.+++|+++ |+.+|...... ......+++.++++.+.. ..|. +.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhCC
Confidence 999999988877765 88887543221 112223345555443221 1254 557899999999999999
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (780)
++++||..||||++++|||+|| .|+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G-------------------~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l 365 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACG-------------------LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL 365 (398)
T ss_pred EEEecccccccCcHHHHHHhcC-------------------CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999999997 4899999999888882 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
+++++ +++...++.++++ +.+++...++.++
T Consensus 366 ~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 366 LTDPA-LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 98753 4555566677777 7799998888775
No 39
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.88 E-value=7.5e-21 Score=218.69 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=201.4
Q ss_pred cCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh---hHhhc---CCCh
Q 003999 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRT---LPVR 245 (780)
Q Consensus 172 f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~---lp~r 245 (780)
|..-.|....-..-.|. .+...+ ++.|+||+|......++..+.++..+.|++++.|--++.. +++.. .+..
T Consensus 149 ~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~ 226 (475)
T cd03813 149 FVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYF 226 (475)
T ss_pred HHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHH
Confidence 44445543332333332 233333 4569999998765555555545556899999999866521 22211 0000
Q ss_pred HH--------HHH-hhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcC
Q 003999 246 DE--------ILR-GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLN 316 (780)
Q Consensus 246 ~e--------il~-~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~ 316 (780)
+. +.+ .+-.||.|...+....+ .+. .++....++.++|+|||.+.|.+...
T Consensus 227 ~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~~-~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~ 286 (475)
T cd03813 227 RRLWIRFFESLGRLAYQAADRITTLYEGNRE-RQI-------------------EDGADPEKIRVIPNGIDPERFAPARR 286 (475)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEEecCHHHHH-HHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc
Confidence 11 111 12356666655543222 111 11122346788999999998865311
Q ss_pred CchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHH
Q 003999 317 LPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLT 396 (780)
Q Consensus 317 ~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~l 396 (780)
. ....++++|+++||+.+.||+..+++|++.+.++.|+++ |+++|.. ++..++.++++++
T Consensus 287 -----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~l 346 (475)
T cd03813 287 -----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECREL 346 (475)
T ss_pred -----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHH
Confidence 0 112567899999999999999999999999998888876 8777632 1222455677777
Q ss_pred HHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceE
Q 003999 397 AKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (780)
Q Consensus 397 v~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (780)
+++.+.. ..|.++ | .+++..+|+.||++|+||..|||+++++|||||| .|+
T Consensus 347 i~~l~l~------~~V~f~-G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G-------------------~PV 397 (475)
T cd03813 347 VESLGLE------DNVKFT-G---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG-------------------IPV 397 (475)
T ss_pred HHHhCCC------CeEEEc-C---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC-------------------CCE
Confidence 7766532 136654 4 5689999999999999999999999999999997 489
Q ss_pred EEcCCCCccccC-C--------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHH
Q 003999 477 VVSEFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQ 542 (780)
Q Consensus 477 V~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~ 542 (780)
|+|..+|+.+.+ + .|++++|.|++++|++|.++++.++ .+....+..++++.+ +++...++++.+
T Consensus 398 Vatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 398 VATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPE-LRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999988877 4 4899999999999999999998654 456666677887766 566666666654
No 40
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.88 E-value=2.1e-20 Score=207.65 Aligned_cols=286 Identities=12% Similarity=0.090 Sum_probs=191.3
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcE-EEEEeCC-CCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKL-GFFLHSP-FPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-~~flH~P-fP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~~ 267 (780)
++..+| |+||+|+++.+. ..++.+. ...++ .+..|.. +-...- -.+....++.+. .+|.+...+....+
T Consensus 77 l~~~~~--Divh~~~~~~~~-~~~~~~~-~~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~vs~~~~~ 149 (374)
T TIGR03088 77 LRQLRP--DIVHTRNLAALE-AQLPAAL-AGVPARIHGEHGRDVFDLDG---SNWKYRWLRRLYRPLIHHYVAVSRDLED 149 (374)
T ss_pred HHHhCC--CEEEEcchhHHH-HHHHHHh-cCCCeEEEeecCcccccchh---hHHHHHHHHHHHHhcCCeEEEeCHHHHH
Confidence 344566 899999887543 2222222 22332 2233321 100000 011122333322 36777777776665
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~ 345 (780)
.+.+. ++. ...++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++
T Consensus 150 ~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~ 205 (374)
T TIGR03088 150 WLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQA 205 (374)
T ss_pred HHHHh----cCC---------------ChhhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCc
Confidence 55431 121 2345788999999988764321 1 111112222 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|+..+++++|+...++.|+.+|. |+..+ ++++.+++.+. ...+++.+. .+++.
T Consensus 206 ~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~~----~~~~~~~~~~~-------~~~v~~~g~--~~~~~ 267 (374)
T TIGR03088 206 VKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPARG----ACEQMVRAAGL-------AHLVWLPGE--RDDVP 267 (374)
T ss_pred ccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchHH----HHHHHHHHcCC-------cceEEEcCC--cCCHH
Confidence 99999999999999999887656677988873 33323 34444443321 234455553 57899
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (780)
.+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++
T Consensus 268 ~~~~~adi~v~pS~~Eg~~~~~lEAma~G-------------------~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~l 328 (374)
T TIGR03088 268 ALMQALDLFVLPSLAEGISNTILEAMASG-------------------LPVIATAVGGNPELVQHGVTGALVPPGDAVAL 328 (374)
T ss_pred HHHHhcCEEEeccccccCchHHHHHHHcC-------------------CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHH
Confidence 99999999999999999999999999997 4899999999888883 3899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
|++|.++++.++ ++....++.++++ ..+++...++.+.+-.++
T Consensus 329 a~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 329 ARALQPYVSDPA-ARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999998654 4555666778887 578999888888766554
No 41
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.87 E-value=4.1e-20 Score=202.40 Aligned_cols=280 Identities=18% Similarity=0.198 Sum_probs=198.1
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh-hcCCEEEeecHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARH 268 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~Dligf~t~~y~~~ 268 (780)
++++..+| |+||+|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455666 899999999888888888777778888888865432111 11111111 1245555555555555
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
|+... + -...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 54310 0 0123678899999988775421 1223456665 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|+.++.+++|+++ |+++|. |++.++ +.+.+++.|.. ..|.++ +. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999998888766 877763 333333 33444433211 125554 44 46899
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-CcEEECCCCHHHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVAD 504 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ 504 (780)
.+|+.||++++||..||||++++|||+|| .|+|+|..+|..+.+. +|+.++|.|++++|+
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACE-------------------LPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcC-------------------CCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 99999999999999999999999999997 4889999988888774 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHHHHH
Q 003999 505 AMTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQDL 544 (780)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l~~l 544 (780)
+|.+++++++..+..+.+. +++ .+.+++..+++.+++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777666555555 444 46699999999887644
No 42
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.87 E-value=6.1e-20 Score=202.46 Aligned_cols=274 Identities=18% Similarity=0.133 Sum_probs=192.2
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCC----CChhHhhcCCChHHHHHh-hhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y 265 (780)
+++..+| |+||+|+.+..+....+.++ .++|+.+.+|... +.............+.+. +..+|.|.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4555666 89999977644433333333 4689999889532 111111000011222222 34589998888765
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~ 345 (780)
.+.+.+ .|. ...++.++|+|+|.+.+.+.. .-.++++++++||+.+
T Consensus 154 ~~~~~~-----~~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLA-----LGF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHH-----cCC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 555542 121 123577899999988775321 0134678999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|+..+.+++|+++ |+++|. ++.. .++++++++.+ .. ..|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~~----~~--~~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARALG----LG--GRVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHcC----CC--CeEE-ECCCCCHHHHH
Confidence 9999999999999988888765 887773 3322 34455554432 11 1254 56789999999
Q ss_pred HHHHhcceeeeccC------CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECC
Q 003999 426 AYYAVAECCIVNAV------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNP 496 (780)
Q Consensus 426 aly~~ADv~vvtS~------rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (780)
.+|+.||++++||. .||||++++|||+|| .|+|+|..+|..+.+. .|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-------------------VPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcC-------------------CCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 599999999999997 4899999999888772 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
.|+++++++|.++++.++ .+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLADPD-LRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 999999999999998653 4555556678877 4689888888765
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.86 E-value=8.2e-20 Score=206.75 Aligned_cols=274 Identities=15% Similarity=0.107 Sum_probs=182.2
Q ss_pred cCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCC-------------hH--HH-----------
Q 003999 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV-------------RD--EI----------- 248 (780)
Q Consensus 195 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~-------------r~--ei----------- 248 (780)
.+| |+|..|--+...+ .+.+.++++|+++.+|-|.-+++.+..+-. +. .+
T Consensus 106 ~~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 357 6555443233323 355567789999999955434454422111 11 01
Q ss_pred HH--hhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHH
Q 003999 249 LR--GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE 326 (780)
Q Consensus 249 l~--~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~ 326 (780)
+. .+-.||.|-..+....+++.+. .+ ...++.++|+|+|.+.|.+.. .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~----~~----------------~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL----WK----------------RNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH----hC----------------cCCCcEEEcCCCCHHHhcccc---c-------
Confidence 11 1335788887776555454321 11 112577889999988775321 0
Q ss_pred HHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003999 327 IEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (780)
Q Consensus 327 lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g 405 (780)
....++.+|++|+|+.+.||+...++||.++.+++|+.. .++.|+++|.... ++..+..+++++++++.+..
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~-- 304 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE-- 304 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC--
Confidence 012456899999999999999999999999999887631 2466888875321 11123455667777665421
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 406 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
..|+|. +.++.+++.++|+.||+++.||..||||++++|||||| .|+|+|..+|..
T Consensus 305 ----~~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G-------------------~pvIa~~~ggp~ 360 (419)
T cd03806 305 ----DKVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG-------------------LIPLAHASGGPL 360 (419)
T ss_pred ----CeEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC-------------------CcEEEEcCCCCc
Confidence 136644 68999999999999999999999999999999999997 478888887865
Q ss_pred c-cCC------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 486 P-SLS------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 486 ~-~l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+ .+. .|++++ |++++|++|.+++++++.+++.+.+..++...+++...
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 4 333 378874 99999999999999987666554333444445565443
No 44
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.85 E-value=2.9e-19 Score=197.34 Aligned_cols=285 Identities=13% Similarity=0.142 Sum_probs=195.4
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcC---CCcEEEEEeCCCCChhHhhcCCChHHH-HHhhhcCCEEEe
Q 003999 185 KIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN---RIKLGFFLHSPFPSSEIYRTLPVRDEI-LRGLLNCDLIGF 260 (780)
Q Consensus 185 ~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~~~~lp~r~ei-l~~ll~~Dligf 260 (780)
+.+.+.+ +..+| |+|++|.+....++.++.++.. +.++.+++|..-.. ....-+....+ ...+..+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 4444444 44565 8999998766555555544322 67888889953211 11111222222 234557999999
Q ss_pred ecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEE
Q 003999 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLI 337 (780)
Q Consensus 261 ~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vi 337 (780)
.+....+.+...+ + ...++.++|+|+|...+.+.. . ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKP-----D---EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCc-----h---HHHHHhcCCCCCCeEE
Confidence 9987766654311 1 122578899999987765321 1 1233444 478899
Q ss_pred EEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecC
Q 003999 338 LGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417 (780)
Q Consensus 338 l~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~ 417 (780)
++++|+.+.||+..+++|++++.++ ++++ |+.+|. +++..+ +++++.+.+ .. ..|.++.
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~----~~~~~~~~~----~~--~~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSP----AERLARELG----LQ--DDVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHH----HHHHHHHcC----CC--ceEEEec-
Confidence 9999999999999999999988654 3344 776763 333333 334443332 11 1266554
Q ss_pred CCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEE
Q 003999 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRV 494 (780)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~V 494 (780)
. .+++..+|+.||++|+||..||||++++|||+|| .|+|+|+.+|..+.+ + .|+++
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-------------------~PvI~s~~~~~~e~i~~~~~G~~~ 318 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACG-------------------VPVVASNAGGIPEVVKHGETGFLV 318 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-------------------CCEEEeCCCCchhhhcCCCceEEc
Confidence 4 3579999999999999999999999999999997 489999999988877 3 48999
Q ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHHHHHH
Q 003999 495 NPWDIDAVADAMTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l~~l~ 545 (780)
+|.|++++|++|.++++++. ++....++++++ ...+++...++.+.+-++
T Consensus 319 ~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 319 DVGDVEAMAEYALSLLEDDE-LWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999998654 455555667777 466898888888876554
No 45
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.85 E-value=1.3e-19 Score=198.49 Aligned_cols=268 Identities=17% Similarity=0.194 Sum_probs=191.2
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
+..+| |+|++|..+...+..++.+ ..++++.+.+|-.++....+ ..+ +..+|.+.+.+....+.+.
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~~---~~~~~~vi~~s~~~~~~~~-- 140 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NAI---MARGDRVIAVSNFIADHIR-- 140 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HHH---HHhcCEEEEeCHHHHHHHH--
Confidence 44455 8999999776655555444 34789999999877543211 222 3468988887765554443
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCCh
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi 349 (780)
...+. ...++.++|+|+|...|...... ......+++++ +++++++++||+.+.||+
T Consensus 141 --~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 141 --ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred --HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 11221 23467889999999887643221 11222355555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|+..+.+.+++++ |+.+|... ....+.+++.+.+.+.+.. ..|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHHH
Confidence 999999999988767665 88777432 2223444444444443211 1266554 4 678999999
Q ss_pred hcceeeecc-CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 430 VAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 430 ~ADv~vvtS-~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
.||++++|| ..||||++.+|||||| .|+|+|..+|..+.+. .|++++|.|+++++++
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~ 323 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMG-------------------RPVIASDHGGARETVRPGETGLLVPPGDAEALAQA 323 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcC-------------------CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHH
Confidence 999999999 7899999999999997 4889999888877773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
|..++...++++....++.++++.++
T Consensus 324 i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 324 LDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 99888877777887778888888654
No 46
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.85 E-value=1.9e-19 Score=197.41 Aligned_cols=257 Identities=12% Similarity=0.090 Sum_probs=176.0
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHH-hhhcCCEEEeecHHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDYARHFL 270 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~Dligf~t~~y~~~Fl 270 (780)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+.+ .+..+|.+-..+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 344455 899999988777777766665555667778877654433221111001111 12346776666655444432
Q ss_pred HHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccC
Q 003999 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFK 347 (780)
Q Consensus 271 ~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~K 347 (780)
.. ....++.++|+|+|...+.... ...+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~---~~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNE---EIRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCc---hhhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 20 0123678999999998875421 1111 1 2222 5788999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHH
Q 003999 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (780)
Q Consensus 348 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 427 (780)
|+..+++|+..+.+++|+++ |+.+|. |+..+.+ ++.+++. +.. ..|.+. +. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~----~~~~~~~----~~~--~~v~~~-g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEI----KKKVKEL----GLE--DKVIFL-GV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHH----HHHHHhc----CCC--CcEEEe-cc--cCCHHHH
Confidence 99999999999999998876 887773 3433333 3333332 211 136554 44 6789999
Q ss_pred HHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHH
Q 003999 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADA 505 (780)
Q Consensus 428 y~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~a 505 (780)
|+.||++|+||..||||++++|||||| .|+|+|..+|..+.+. ++++..+.+++++|++
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G-------------------~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~ 324 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASG-------------------LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEE 324 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhC-------------------CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHH
Confidence 999999999999999999999999997 5899999999888774 3566666678999999
Q ss_pred HHHHHcCCHHHHHH
Q 003999 506 MTLAINMRDSEKQL 519 (780)
Q Consensus 506 i~~aL~m~~~er~~ 519 (780)
|.+++++|+..+..
T Consensus 325 i~~l~~~~~~~~~~ 338 (358)
T cd03812 325 ILKLKSEDRRERSS 338 (358)
T ss_pred HHHHHhCcchhhhh
Confidence 99999998755444
No 47
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.85 E-value=3.3e-19 Score=201.95 Aligned_cols=289 Identities=11% Similarity=0.071 Sum_probs=188.6
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcE-EEEEeCCCCChhHhhcCCChHHHH----HhhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKL-GFFLHSPFPSSEIYRTLPVRDEIL----RGLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~~~lp~r~eil----~~ll~~Dligf~t~~y 265 (780)
+++..+| |+||.|++...+++.+..... .+++ +...|. ++... +..++ ..+..++++.-.+. +
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 4455566 899999999877766665543 4555 445676 33211 11211 11233444333222 3
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEecccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMD 344 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld 344 (780)
..+.....+.+.. .+.....+|.++|+|||+.+|.+....+ ......++..+ .+..+|++|+|+.
T Consensus 343 v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~ 408 (578)
T PRK15490 343 MSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFV 408 (578)
T ss_pred hhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEe
Confidence 3222222121110 0111345789999999999887532111 11122233333 3557888999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHH
Q 003999 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
+.||...+++|+.++++++|+++ |+++| +|+.. .++++++++.+.. ..|+|+ |. .+++
T Consensus 409 ~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~----eeLk~la~elgL~------d~V~Fl-G~--~~Dv 466 (578)
T PRK15490 409 GDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDLR----AEAQKRAEQLGIL------ERILFV-GA--SRDV 466 (578)
T ss_pred hhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----CchhH----HHHHHHHHHcCCC------CcEEEC-CC--hhhH
Confidence 99999999999999999999876 88777 34433 3455555544321 136655 44 4689
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHH
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDA 501 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~ 501 (780)
..+|+.||+||+||.+|||+++++|||||| .|+|+|..+|+.+.+ + +|++|+|.|+++
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~G-------------------lPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVG-------------------VPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhC-------------------CCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999999999999999999999999997 489999999998877 3 489999999999
Q ss_pred HHHHHHHHHcCCH--HHHHHHHHHHhhHhh-hCCHHHHHHHHHHHHHH
Q 003999 502 VADAMTLAINMRD--SEKQLRHEKHYRYVS-THDVAYWARSFAQDLER 546 (780)
Q Consensus 502 ~A~ai~~aL~m~~--~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l~~ 546 (780)
+++++..+..+.. .++....++.++++. .+++...++.+++-++.
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 9998854433222 123333456788874 58988888888876653
No 48
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.84 E-value=9.7e-19 Score=197.38 Aligned_cols=282 Identities=16% Similarity=0.153 Sum_probs=194.8
Q ss_pred CCEEEEeCCccchH-HHHHHHhcCCCcEEEEEeCCCCChhHh-hcCC--ChH----HHHHh-hhcCCEEEeecHHHHHHH
Q 003999 199 DDCVWVHDYHLMVL-PTFLRKRFNRIKLGFFLHSPFPSSEIY-RTLP--VRD----EILRG-LLNCDLIGFHTFDYARHF 269 (780)
Q Consensus 199 ~DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~-~~lp--~r~----eil~~-ll~~Dligf~t~~y~~~F 269 (780)
.|+||+|...+... ..++-++..+.++++..|--||..-.- ...+ ... .+.+. +-.+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 39999998665422 223323334668888788656532110 0010 001 11122 335899988888766665
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEecccccc
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIF 346 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~ 346 (780)
.+ .+. ...++.++|+|||.+.|.+... .....+++++ +++++++++||+.+.
T Consensus 187 ~~-----~~~---------------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KGV---------------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cCC---------------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 121 2346888999999988864311 1123456666 357899999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
||+..+++|++++ +++|+++ |+++| +|+.. +++++++++.+ . ..|+|. |.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~----~~l~~~~~~~~----l---~~v~f~-G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICG-----QGGGK----ARLEKMAQCRG----L---PNVHFL-PLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhH----HHHHHHHHHcC----C---CceEEe-CCCCHHHHHH
Confidence 9999999999876 4566654 88776 34433 33444554432 1 236654 6889999999
Q ss_pred HHHhcceeeeccCCcCCCcc----hhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc--cccC-CCcEEECCCCH
Q 003999 427 YYAVAECCIVNAVRDGMNLV----PYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--SPSL-SGAIRVNPWDI 499 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv----~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~al~VnP~d~ 499 (780)
+|+.||++++||..|+++++ .+|||||| .|+|+|..+|. .+.+ ..|++++|.|+
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-------------------~PVi~s~~~g~~~~~~i~~~G~~~~~~d~ 360 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASG-------------------RNVVATAEPGTELGQLVEGIGVCVEPESV 360 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcC-------------------CCEEEEeCCCchHHHHHhCCcEEeCCCCH
Confidence 99999999999999996544 69999997 48899988774 3444 46999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHHHHHHHH
Q 003999 500 DAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLERA 547 (780)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l~~~ 547 (780)
+++|++|.++++++. ++....++.++++. .+|+...+++|++.+++.
T Consensus 361 ~~la~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 361 EALVAAIAALARQAL-LRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999998753 56666677888886 589999999999888765
No 49
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.84 E-value=9.8e-19 Score=198.14 Aligned_cols=347 Identities=13% Similarity=0.156 Sum_probs=205.1
Q ss_pred cccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEE
Q 003999 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFL 229 (780)
Q Consensus 151 ~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~fl 229 (780)
+.-||-.|+--.+. ....+++..-=.|.. ..|-..+.+. .....|++|.|||+.-....+||++.++++.+|+.
T Consensus 105 ~~~lW~~~~i~s~~---~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGSPE---GDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCCCC---CCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 44689888875433 113344433333431 1111122222 11235999999999999999999888999999999
Q ss_pred eCCCCChhHhhcCCCh-HHH-----------------------HH--hhhcCCEEEeecHHHHHHHHHHHHhhhCceecc
Q 003999 230 HSPFPSSEIYRTLPVR-DEI-----------------------LR--GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYES 283 (780)
Q Consensus 230 H~PfP~~e~~~~lp~r-~ei-----------------------l~--~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~ 283 (780)
|..- +-|.+-.. ..+ ++ ....||.+.-.+..-++ -|..+
T Consensus 180 HAT~----~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~----E~~~L------- 244 (590)
T cd03793 180 HATL----LGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAY----EAEHL------- 244 (590)
T ss_pred cccc----cccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHH----HHHHH-------
Confidence 9543 33321100 000 11 11123333322221110 11122
Q ss_pred CCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC----chhHHHHHH-----HHHHc---CCCeEEEE-eccccc-cCCh
Q 003999 284 KRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL----PATATKIKE-----IEKQF---DGKKLILG-IDDMDI-FKGI 349 (780)
Q Consensus 284 ~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~----~~~~~~~~~-----lr~~~---~~~~vil~-Vdrld~-~KGi 349 (780)
.++...+ |+|+|||++.|.+.... ....+++.+ ++.+| ++++++++ +||+++ .||+
T Consensus 245 ---------l~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGi 314 (590)
T cd03793 245 ---------LKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGA 314 (590)
T ss_pred ---------hCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCH
Confidence 2233223 89999999998754210 011122222 35554 37788888 899999 9999
Q ss_pred HHHHHHHHHHHHhCCC-CCCceEEEEEEcCCCCCh---------hHHHHHHHHHHHHHHHHhhc----------------
Q 003999 350 SLKLLAMEQLLQQHPG-MRGKVVLVQIVNPARGSG---------KDVQEAKKETYLTAKRINEV---------------- 403 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~-~~~~vvLvqi~~p~r~~~---------~~~~~l~~ei~~lv~~In~~---------------- 403 (780)
+.+|+|+.++-..--. -.++.|+..+..|+...+ .-.+++++.+.++.++|+.+
T Consensus 315 DvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~ 394 (590)
T cd03793 315 DMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEEL 394 (590)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhh
Confidence 9999999987441111 012223333445665332 22345666666666666554
Q ss_pred ----------------------------------------------cC-CCCcccEEEecCCCC------HHHHHHHHHh
Q 003999 404 ----------------------------------------------YG-SPNYEPVVLIDRPVP------RFEKSAYYAV 430 (780)
Q Consensus 404 ----------------------------------------------~g-~~~~~pV~~~~~~v~------~~el~aly~~ 430 (780)
|. ..+...|+|....++ ..+...+|+.
T Consensus 395 ~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g 474 (590)
T cd03793 395 LDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG 474 (590)
T ss_pred cchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh
Confidence 10 012223554443332 2458889999
Q ss_pred cceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----ccCC----CcEEEC-------
Q 003999 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSLS----GAIRVN------- 495 (780)
Q Consensus 431 ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~al~Vn------- 495 (780)
||++|+||.+||||++++|||||| .|+|+|..+|.. +.+. .|+.|.
T Consensus 475 ~dl~v~PS~yE~fG~~~lEAma~G-------------------~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~ 535 (590)
T cd03793 475 CHLGVFPSYYEPWGYTPAECTVMG-------------------IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSP 535 (590)
T ss_pred ceEEEeccccCCCCcHHHHHHHcC-------------------CCEEEccCcchhhhhHHHhccCCCceEEEecCCccch
Confidence 999999999999999999999997 589999999883 3332 378887
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
|.+++++|++|.+.++++..++........+....++|.+-+..+++.-.-
T Consensus 536 ~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 536 DESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 566889999999999776443333222233556668888877777765443
No 50
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.84 E-value=6.4e-19 Score=192.50 Aligned_cols=283 Identities=20% Similarity=0.247 Sum_probs=193.0
Q ss_pred HHHcCCCCCEEEEeCCccchHH---HHHHH--hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLP---TFLRK--RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDY 265 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp---~~lr~--~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y 265 (780)
....++ |+|++|+++-...| ..+.. +..+.++.+.+|.+.+.... .....+.+. +-.+|.|-+.+.+.
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHH
Confidence 334444 89999883322111 11111 23678999999986222111 112222222 34689999887555
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~ 345 (780)
+++++... . ..++.++|+|++...+.... . .++ .....++.+++++||+.+
T Consensus 146 ~~~~~~~~-------------------~--~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~ 196 (366)
T cd03822 146 LRALLLRA-------------------Y--PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRP 196 (366)
T ss_pred HHHHHhhc-------------------C--CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccC
Confidence 55554210 0 23678899999987664321 1 111 112257889999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++.+.+++|+++ |+.+|... +.....+.+..+++.+. +.. ..|.++++.++.+++.
T Consensus 197 ~K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~----~~~--~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 197 YKGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL----GLA--DRVIFINRYLPDEELP 262 (366)
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc----CCC--CcEEEecCcCCHHHHH
Confidence 9999999999999998888766 87776421 11111111111223332 211 1366666559999999
Q ss_pred HHHHhcceeeeccCCc--CCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHH
Q 003999 426 AYYAVAECCIVNAVRD--GMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDID 500 (780)
Q Consensus 426 aly~~ADv~vvtS~rE--GmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~ 500 (780)
.+|+.||++++||..| |++++++|||+|| .|+|+|..+| .+.+ . .|++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G-------------------~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFG-------------------KPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcC-------------------CCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 9999999999997 4899999888 6666 2 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
++|++|.++++.++ ++....++.++++.++++..+++.+.+-+
T Consensus 323 ~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADPE-LAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcChH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999999764 45556677888998899999999887643
No 51
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.84 E-value=6.6e-19 Score=196.48 Aligned_cols=281 Identities=17% Similarity=0.124 Sum_probs=185.9
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHH---------hhhcCCEEEeecHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR---------GLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~---------~ll~~Dligf~t~~y~~~ 268 (780)
..|+|++|+.... ++ +++.. ...+++|..|.| .......-.+...+.+ .+-.+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~-~~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSAC-VP-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchH-HH-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 3599999986643 22 33332 338999999954 2211110011111111 133478887766654443
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
+... ++. .....+.++|+|+|.+.|.+....+ ..+.....+++.+++++||+++.||
T Consensus 169 ~~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 3321 110 0111235789999998886432110 0111112257789999999999999
Q ss_pred hHHHHHHHHHHHHhC---CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHH-HhhccCCCCcccEEEecCCCCHHHH
Q 003999 349 ISLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR-INEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 349 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~-In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
+..+++|++++.++. |+++ |+.+|.... ...+..++.+++++++++ .+.. ..|+| .|.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f-~g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIF-LPSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEE-eCCCChHHH
Confidence 999999999998876 6655 887875331 112223444566666654 3211 13664 468999999
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHH
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDA 501 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~ 501 (780)
..+|+.||++++||..||||++++|||||| .|+|+|..+|..+.+ + .|++++| |+++
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~ 353 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAG-------------------KPVIACNSGGPLETVVDGETGFLCEP-TPEE 353 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcC-------------------CCEEEECCCCcHHHhccCCceEEeCC-CHHH
Confidence 999999999999999999999999999997 489999998888777 3 3788877 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHH
Q 003999 502 VADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARS 539 (780)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~ 539 (780)
+|++|.++++.++ +++.+.++.++++ ..+++...+++
T Consensus 354 ~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 354 FAEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 9999999999875 4555666677777 45787777654
No 52
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.84 E-value=2.8e-19 Score=210.88 Aligned_cols=280 Identities=13% Similarity=0.094 Sum_probs=183.2
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEE-EEeCCCCC---hhHhhcCCChHHHHHhhhcCCEEEee--cHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGF-FLHSPFPS---SEIYRTLPVRDEILRGLLNCDLIGFH--TFDYA 266 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP~---~e~~~~lp~r~eil~~ll~~Dligf~--t~~y~ 266 (780)
+..+| |+|++|++.-.++..+..+. ..+|+++ .+|. +|. .+.++. ....+.+.+..++.+.+. +...+
T Consensus 397 k~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 397 RSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred HHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHH
Confidence 33355 99999999988777776654 4566654 5564 221 121110 011122333334433333 22222
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcC-CCeEEEEeccccc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD-GKKLILGIDDMDI 345 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~vil~Vdrld~ 345 (780)
+.+.. .++ ....+|.++|+|||...|.+. +........++...+ +.++|++|+|+++
T Consensus 471 ~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~ 528 (694)
T PRK15179 471 HRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDD 528 (694)
T ss_pred HHHHH----HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCc
Confidence 33322 112 123478899999999887531 211111122222233 4678999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++||.++++++|+++ |+++|. |+. +.++++++++.+.. ..|+ |.|.. .++.
T Consensus 529 ~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~ 586 (694)
T PRK15179 529 NKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG------ERIL-FTGLS--RRVG 586 (694)
T ss_pred cCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHH
Confidence 9999999999999999999876 887873 333 23455565554321 1255 45554 4799
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCH--H
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDI--D 500 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~--~ 500 (780)
.+|+.||++|+||.+|||+++++|||+|| .|+|+|..+|+.+.+ + +|++|+|.|. +
T Consensus 587 ~ll~aaDv~VlpS~~Egfp~vlLEAMA~G-------------------~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~ 647 (694)
T PRK15179 587 YWLTQFNAFLLLSRFEGLPNVLIEAQFSG-------------------VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAP 647 (694)
T ss_pred HHHHhcCEEEeccccccchHHHHHHHHcC-------------------CeEEEECCCChHHHccCCCCEEEeCCCCCChH
Confidence 99999999999999999999999999997 489999999988888 3 4899998875 6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQ 542 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~ 542 (780)
+++++|.+++....... ...++.++++ ..+++..-++.+++
T Consensus 648 ~La~aL~~ll~~l~~~~-~l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 648 DVAEALARIHDMCAADP-GIARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHhChhccH-HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999887654322 2334567776 46888777776664
No 53
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.84 E-value=2.7e-19 Score=195.43 Aligned_cols=273 Identities=17% Similarity=0.152 Sum_probs=195.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh--hHhhc---CCChHHHHHhhhcCCEEEeecHHHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYRT---LPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~~~---lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~ 273 (780)
-|+||+|.+..... +..+.++++.+|..+|.. +.+.. ...+......+..+|.+.+.+...++.+.+..
T Consensus 86 ~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~ 159 (365)
T cd03809 86 LDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL 159 (365)
T ss_pred CCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh
Confidence 39999999877765 456889999999765422 11110 11222334456678999998887666665421
Q ss_pred HhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHH
Q 003999 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (780)
Q Consensus 274 ~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l 353 (780)
+. ...++.++|+|+|...+.... . .. ........++++|+++||+.+.||+...+
T Consensus 160 ----~~---------------~~~~~~vi~~~~~~~~~~~~~---~--~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l 214 (365)
T cd03809 160 ----GV---------------PPDKIVVIPLGVDPRFRPPPA---E--AE-VLRALYLLPRPYFLYVGTIEPRKNLERLL 214 (365)
T ss_pred ----Cc---------------CHHHEEeeccccCccccCCCc---h--HH-HHHHhcCCCCCeEEEeCCCccccCHHHHH
Confidence 11 123578899999988775421 1 11 11112235788999999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcce
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 433 (780)
+|+..+.+.+|+++ |+.+|... ........++ .+. +. ...+.+.+.++.+++..+|+.||+
T Consensus 215 ~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~ 275 (365)
T cd03809 215 EAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARA 275 (365)
T ss_pred HHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhh
Confidence 99999998888655 77776432 1111221211 111 21 123446679999999999999999
Q ss_pred eeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcC
Q 003999 434 CIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINM 512 (780)
Q Consensus 434 ~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m 512 (780)
+++||..||+|++++|||+|| .|+|+|+.+|..+.+ .+++.++|.|+++++++|.++++.
T Consensus 276 ~l~ps~~e~~~~~~~Ea~a~G-------------------~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~ 336 (365)
T cd03809 276 FVFPSLYEGFGLPVLEAMACG-------------------TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED 336 (365)
T ss_pred hcccchhccCCCCHHHHhcCC-------------------CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC
Confidence 999999999999999999997 488999988877777 468999999999999999999876
Q ss_pred CHHHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 513 ~~~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
++ .+....+..++++.++++..++++++
T Consensus 337 ~~-~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 337 PA-LREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HH-HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 54 45555566778889999999998875
No 54
>PLN02949 transferase, transferring glycosyl groups
Probab=99.84 E-value=9.1e-19 Score=199.66 Aligned_cols=314 Identities=13% Similarity=0.125 Sum_probs=207.5
Q ss_pred ccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCc-cchHHHHHHHhcCCCcEE
Q 003999 148 GFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYH-LMVLPTFLRKRFNRIKLG 226 (780)
Q Consensus 148 gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~i~ 226 (780)
.+-..-.||-||-.-. .-+..|-++..+.+ .. |.|||-.-- ..-+| ++| +...||+
T Consensus 108 ~~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~ 164 (463)
T PLN02949 108 KWIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVV 164 (463)
T ss_pred cccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEE
Confidence 3445667777776532 22566666664432 12 347774321 12223 344 3478999
Q ss_pred EEEeCCCCChhHhhcCCCh-------------------HH----H---HHh--hhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 227 FFLHSPFPSSEIYRTLPVR-------------------DE----I---LRG--LLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 227 ~flH~PfP~~e~~~~lp~r-------------------~e----i---l~~--ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
+.+|-|.-+.++...+-.+ +. . +.. +-.+|.|...+....+++.+. .+
T Consensus 165 ~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~~ 240 (463)
T PLN02949 165 CYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----WR 240 (463)
T ss_pred EEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----cC
Confidence 9999876665444322100 00 0 111 235788877766555555321 11
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
...+++++++|+|...+... +. +...+++++++|+|+.+.||+..+|+||.+
T Consensus 241 ----------------~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~ 292 (463)
T PLN02949 241 ----------------IPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFAL 292 (463)
T ss_pred ----------------CCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHH
Confidence 11246778889998766321 10 011356789999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
++++.++-..++.|+++|... .++..+..+++++++++.+-. + .|.|+ +.++.+++.++|+.||+++.||
T Consensus 293 l~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f~-g~v~~~el~~ll~~a~~~v~~s 362 (463)
T PLN02949 293 ALEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEFH-KNVSYRDLVRLLGGAVAGLHSM 362 (463)
T ss_pred HHHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 887543211234488888532 122223445666666654321 1 26654 6899999999999999999999
Q ss_pred CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc-cCC----C--cEEECCCCHHHHHHHHHHHHc
Q 003999 439 VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP-SLS----G--AIRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 439 ~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~----~--al~VnP~d~~~~A~ai~~aL~ 511 (780)
..||||++++|||||| .|+|+|..+|..+ .+. | |++++ |++++|++|.++++
T Consensus 363 ~~E~FGivvlEAMA~G-------------------~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~ 421 (463)
T PLN02949 363 IDEHFGISVVEYMAAG-------------------AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLR 421 (463)
T ss_pred ccCCCChHHHHHHHcC-------------------CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHh
Confidence 9999999999999996 4889998888653 332 2 67764 99999999999999
Q ss_pred CCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 512 MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 512 m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
++++++++..++.++.+.++++..-++++++.++..
T Consensus 422 ~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 422 MRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred CCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 887777777777888899999999888888777765
No 55
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.82 E-value=4.2e-18 Score=192.15 Aligned_cols=272 Identities=14% Similarity=0.103 Sum_probs=189.5
Q ss_pred CCCCCEEEEeCCccch-HHHHHHHhcCCCcEEEEEeCCCCChhHh--hcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 196 NPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIY--RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 196 ~~~~DiVwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~~--~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
+++.|+++.|-++... .-.+++++....+++...|-.....+.+ ..++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 3445777776555443 3345667666666888899532111111 111222222 346899998888766554321
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
.+ ....++.++|+|++...+... + ...++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHHH
Confidence 11 123467889999998765431 0 11356789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh--
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV-- 430 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~-- 430 (780)
++|+.++.+++|+.. +.++.+|. |++.++ +++++++. +.. ..|+ +.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~----l~~~~~~~----~~~--~~V~-f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDT----LKELAESK----PEN--ISVN-FTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHH----HHHHHHhc----CCC--ceEE-EecCCChHHHHHHHhhcC
Confidence 999999999988764 66776663 444333 34444322 111 1255 5679999999999986
Q ss_pred cceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECC-CCHHHHHHHH
Q 003999 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNP-WDIDAVADAM 506 (780)
Q Consensus 431 ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP-~d~~~~A~ai 506 (780)
||+++.||..|||+++++|||+|| .|+|+|..+|..+.+. .|++++| .|++++|++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G-------------------~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFG-------------------IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcC-------------------CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 788999999999999999999997 4899999999988883 3688876 5899999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 507 TLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
.++++.+ +++....++.++++ +.+++..+.++|+
T Consensus 372 ~~ll~~~-~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFIDNE-EEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999855 45666667788887 4588888888775
No 56
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.82 E-value=2.6e-18 Score=186.28 Aligned_cols=281 Identities=17% Similarity=0.172 Sum_probs=192.6
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh-hcCCEEEeecHHHHHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~Dligf~t~~y~~~Fl~ 271 (780)
+..+| |+|++|+++......++.......++.+..|..++...-. ..+....+.+-+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 34455 8999999998777777666546789999999876542100 001111222222 2357765555543333321
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 1235778999999887754321 112334445 46788999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|+..+.+++|+++ |+.+|... ..... ..... ...+.. ..|.++ +. .+++..+|
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~----~~~~~---~~~~~~--~~v~~~-g~--~~~~~~~~ 266 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANL----ELLAL---KELGLE--DKVILL-GE--RSDVPALL 266 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHH----HHHHH---HhcCCC--ceEEEc-cc--cccHHHHH
Confidence 9999999999988888765 77776432 21222 22222 011211 125444 43 46899999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-CcEEECCCCHHHHHHHHH
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMT 507 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~ 507 (780)
+.||++++||..||+|++++|||+|| .|+|+|..+|..+.+. .|+++++.|+++++++|.
T Consensus 267 ~~adi~v~ps~~e~~~~~~~Ea~a~g-------------------~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~ 327 (365)
T cd03807 267 NALDVFVLSSLSEGFPNVLLEAMACG-------------------LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIE 327 (365)
T ss_pred HhCCEEEeCCccccCCcHHHHHHhcC-------------------CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHH
Confidence 99999999999999999999999997 4899999998888774 589999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHH
Q 003999 508 LAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQD 543 (780)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~ 543 (780)
+++++++ ++....+..++++.+ +++..-++.+.+-
T Consensus 328 ~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 328 ALLADPA-LRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHhChH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999874 555666677777754 8888888877754
No 57
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.82 E-value=3.7e-18 Score=186.58 Aligned_cols=264 Identities=17% Similarity=0.145 Sum_probs=188.8
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
.|+|++|..+...+..++..+....+..+.+|.+..... +....+-+.+-.+|.+-..+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 399999987665555666666567899999996432111 111223334557999999888776665431 11
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234688999999988775421 0122457789999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+.++.|+++ |+.+|. ++.. .++.+.+++.+. .+.+.+.+.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 777763 2222 233444444321 12344567899999999999999999999
Q ss_pred CC------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHH
Q 003999 439 VR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 439 ~r------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (780)
.. ||||++.+|||+|| .|+|+|..+|..+.+. .|++++|.|++++|++|.++
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~ 324 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMG-------------------LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERL 324 (355)
T ss_pred eecCCCCccCccHHHHHHHHcC-------------------CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHH
Confidence 99 99999999999997 4889998877776663 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHhh-hCCHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYVS-THDVAYWAR 538 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~-~~~~~~Wa~ 538 (780)
++++. ++....+..++++. .+++...++
T Consensus 325 ~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 325 LDDPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HhCHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 99765 35555556677774 467666554
No 58
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.82 E-value=2.5e-18 Score=187.08 Aligned_cols=274 Identities=18% Similarity=0.193 Sum_probs=182.5
Q ss_pred CCEEEEeCCcc-chHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHH------HHhhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHL-MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI------LRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei------l~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.|+|++|+... ...+.....+..+.++.+..|..++..... .-+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP-HKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc-cchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 49999998432 222222222235788999999776543210 00111111 11133467777666443322211
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
.+...++.++|+|+|.+.+.... .. .. ++++ .++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~---~~----~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALP---SR----GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcch---hh----hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 11234678999999998875421 11 11 3333 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|+.++.+++|+++ |+.+|... ..+. ..++.++.+. +.. ..|. +.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~~---~~~~~~~~~~----~~~--~~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGYR---AELKQIAAAL----GLE--DRVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cchH---HHHHHHHHhc----Ccc--ceEE-EcCCCChHHHHHHH
Confidence 9999999999998888876 77777421 1221 2223333332 211 1254 56789999999999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C-cEEECCCCHHHHHHHH
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G-AIRVNPWDIDAVADAM 506 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai 506 (780)
+.||++++||..||||++++|||+|| .|+|+|..+|..+.+. + ++++ |.+.++++++|
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 339 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACG-------------------TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAAL 339 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcC-------------------CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHH
Confidence 99999999999999999999999997 4899999988887773 3 4555 45669999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHH
Q 003999 507 TLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l 541 (780)
.++++++ +++....++.+++ ...+++..-++.++
T Consensus 340 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999987 4566666777777 46688777777654
No 59
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.82 E-value=4.1e-18 Score=196.08 Aligned_cols=271 Identities=14% Similarity=0.079 Sum_probs=181.5
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh-hHhhcC----CChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS-EIYRTL----PVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~-e~~~~l----p~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
+.|+++++--+... +.++ +..+.++++.++|.-.-+. ..-... +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45898887555433 3344 5567899999999643110 000000 111223344445688877776544333321
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
... +.+...+|.++|+|++...+.+ . ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~-----~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYP-----E----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCc-----c----------cccCCeEEEEEeccccccCHHHH
Confidence 111 1222346788999987543321 0 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 432 (780)
++|+.++.+++|+++ |+++|. |++. +++++++++.+. .+ .|.+ .|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l----~~--~V~f-~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQA----QD--YIHL-KGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCC----CC--eEEE-cCCC---CHHHHHHhCC
Confidence 999999999999876 877763 4433 345556555432 11 2554 4443 6788999999
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC-CccccC-C--CcEEECC----CC----HH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSL-S--GAIRVNP----WD----ID 500 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l-~--~al~VnP----~d----~~ 500 (780)
++|+||.+||||++++|||||| .|+|+|... |.++.+ + +|++|+| .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G-------------------~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSG-------------------LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHhC-------------------CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 9999999999999999999997 489999986 666666 3 4899974 34 89
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
++|++|.++|+ + .+++...+..++.+.++++..-++.+.+-++
T Consensus 456 ~la~~I~~ll~-~-~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN-S-NDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC-h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 3 3566666778888888888887777765554
No 60
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.82 E-value=4e-18 Score=183.87 Aligned_cols=283 Identities=20% Similarity=0.184 Sum_probs=200.4
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhh----cCCChHHHHHhhhcCCEEEeecHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR----TLPVRDEILRGLLNCDLIGFHTFDYA 266 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~----~lp~r~eil~~ll~~Dligf~t~~y~ 266 (780)
+.+..++ |+|++|+++...+.. +..+.++.++++.+|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3344455 899999999887665 4445678999999999887532110 00111122233446899988887666
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDM 343 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrl 343 (780)
+.+.+. +.....++.++|+|+|...+.... ...+... .+++.++++||+
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 655431 011124688899999988775321 1111222 467899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
++.||+..+++|+..+.+++|+++ |+.+|. ++....+ .+++++.+. . ..|. +.+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~----~~~~~~~~~----~--~~v~-~~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREEL----EALAAELGL----G--DRVT-FLGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHH----HHHHHHhCC----C--cceE-EEeccChhh
Confidence 999999999999999988887655 877762 3333333 333333221 1 1355 557899999
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHH
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDID 500 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~ 500 (780)
+..+|+.||++++|+..||++++++|||+|| .|+|+|...|..+.+. .|+++++.|++
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~ 329 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAG-------------------LPVVASDVGGIPEVVEDGETGLLVPPGDPE 329 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcC-------------------CcEEEeCCCChhHHhcCCcceEEeCCCCHH
Confidence 9999999999999999999999999999997 4899999988888774 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHh-hHhhhCCHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHY-RYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~-~~V~~~~~~~Wa~~~l~~l 544 (780)
+++++|.++++.++ .+....+..+ ...+.+++..+++.+++-+
T Consensus 330 ~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 330 ALAEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 99999999998765 3444445555 4557799999998877643
No 61
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.82 E-value=3.6e-18 Score=186.09 Aligned_cols=267 Identities=18% Similarity=0.260 Sum_probs=184.8
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH---------HHHH-hhhcCCEEEee
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD---------EILR-GLLNCDLIGFH 261 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~---------eil~-~ll~~Dligf~ 261 (780)
.+..+| |+|++|+...+........+..++++.+.+|.+|+. +....+... .+.+ .+..+|.+.+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 444555 899999875544333333334578999999988763 222222111 1122 23468888888
Q ss_pred cHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEE
Q 003999 262 TFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLIL 338 (780)
Q Consensus 262 t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil 338 (780)
+......+.. .+ ...++.++|+|+|...+..... . ..++++ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG----D----DERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch----h----HHHHhcCCCCCCeEEE
Confidence 8764444321 11 1224788999999887754211 1 112333 4678899
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCC
Q 003999 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP 418 (780)
Q Consensus 339 ~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~ 418 (780)
++||+.+.||+..+++|++.+.++.++++ |+.+|. ++.. .++.+++++.+.. ..|. +.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVI-FTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-Eecc
Confidence 99999999999999999999988767655 777763 2322 2344444433211 1254 5578
Q ss_pred CCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEEC
Q 003999 419 VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVN 495 (780)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~Vn 495 (780)
++.+++..+|+.||++++||..||+|++.+|||+|| .|+|+|..+|..+.+. +|++++
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~ 327 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAG-------------------LPVVAVDAPGLPDLVADGENGFLFP 327 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcC-------------------CcEEEeCCCChhhheecCceeEEeC
Confidence 999999999999999999999999999999999996 4889999888887773 489999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCC
Q 003999 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~ 532 (780)
+.|. +++++|.+++++++. ++...+..++++.+++
T Consensus 328 ~~~~-~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 328 PGDE-ALAEALLRLLQDPEL-RRRLSKNAEESAEKFS 362 (374)
T ss_pred CCCH-HHHHHHHHHHhChHH-HHHHHHHHHHHHHHHH
Confidence 9888 999999999998764 4555566777777665
No 62
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.82 E-value=8.5e-19 Score=197.40 Aligned_cols=187 Identities=10% Similarity=0.006 Sum_probs=128.1
Q ss_pred EEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecc-c-cccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDD-M-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdr-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
.++.++|+|||++.+..... . ...+ .-+++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 36888999999754321100 0 0001 1256788999999 4 4789999999999875 233 45887
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|.. +... . ..|.++....+.+++..+|+.||+||+||..|||++|++||||||
T Consensus 277 vG~g-----~~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 7742 1100 0 124444323367899999999999999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhC
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STH 531 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~ 531 (780)
.|+|+|..+|+.+.+. +|++|+|.|++++|++++..+... +.....+..++.+ ..+
T Consensus 331 -------------------~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~f 389 (405)
T PRK10125 331 -------------------VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAY 389 (405)
T ss_pred -------------------CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhC
Confidence 5899999999888773 599999999999998654332211 0000123344444 558
Q ss_pred CHHHHHHHHHHHHH
Q 003999 532 DVAYWARSFAQDLE 545 (780)
Q Consensus 532 ~~~~Wa~~~l~~l~ 545 (780)
+....++.+++-.+
T Consensus 390 s~~~~~~~y~~lY~ 403 (405)
T PRK10125 390 SGQQMLEEYVNFYQ 403 (405)
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888776543
No 63
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.82 E-value=4.3e-18 Score=185.94 Aligned_cols=275 Identities=19% Similarity=0.232 Sum_probs=193.8
Q ss_pred CCEEEEeC-CccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcC-CC-------hHHHHH-hhhcCCEEEeecHHHHHH
Q 003999 199 DDCVWVHD-YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTL-PV-------RDEILR-GLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 199 ~DiVwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-p~-------r~eil~-~ll~~Dligf~t~~y~~~ 268 (780)
-|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+.+ .+..+|.+.+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 38999998 444455555555556889999999988754322111 11 111222 244689999999887776
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
+.. .+ ....++.++|+|++...+...... ..... .....++.+++++||+.+.||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccC
Confidence 641 11 113367889999998877543211 10111 111257889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|+.++.+. |+++ |+.+|. ++....+++ ++.. .+ ...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~----~~~~----~~---~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKE----LAKA----LG---LDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHH----HHHH----cC---CCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6655 776663 333333322 2211 11 23477664 89999999999
Q ss_pred HhcceeeeccCCcCC-----CcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHH
Q 003999 429 AVAECCIVNAVRDGM-----NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDID 500 (780)
Q Consensus 429 ~~ADv~vvtS~rEGm-----nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~ 500 (780)
+.||++++||..|++ ++..+|||+|| .|+|+|..+|..+.+. .|+++++.|++
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G-------------------~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~ 353 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAG-------------------KPVLASVDGESAELVEEAGAGLVVPPGDPE 353 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCC-------------------CcEEEecCCCchhhhccCCcceEeCCCCHH
Confidence 999999999999876 56679999997 5899999999888873 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSF 540 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~ 540 (780)
+++++|.++++.++ ++....++.++++. .+++..+++.+
T Consensus 354 ~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 354 ALAAAILELLDDPE-ERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHhChH-HHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999997654 56666677788887 78998888765
No 64
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.81 E-value=4.7e-18 Score=185.27 Aligned_cols=274 Identities=16% Similarity=0.148 Sum_probs=191.3
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCCh----HHHHHh-hhcCCEEEeecHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR----DEILRG-LLNCDLIGFHTFDYAR 267 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r----~eil~~-ll~~Dligf~t~~y~~ 267 (780)
+..+| |+|++|...........-.+..++++.+++|..||..-........ ..+.+. .-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 45566 8999997544322222222235788999999887632111111111 122222 3357888888776554
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~ 345 (780)
.+.. .+ ..++.++|+|+|...|.+.... ...++++ .++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2211 00 1256789999999877643211 1122222 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+...++|+.++.++ |+++ |+.+|. +++...++ . . ...|.+. +.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~---~-----~~~v~~~-g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A---R-----YPNVHFL-GFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c---c-----CCcEEEE-eccCHHHHH
Confidence 99999999999999876 7665 777763 23222221 0 0 1236644 568999999
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (780)
.+|+.||++++||..||||++++|||||| .|+|+|..+|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMASG-------------------LPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHcC-------------------CCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 99999999999999999999999999997 4899999999888773 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
+++|.++++.++ ++....+..++++..+++..+++.+++-+
T Consensus 323 ~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 999999998765 45566666788888899999988887643
No 65
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.81 E-value=5.5e-18 Score=183.68 Aligned_cols=277 Identities=21% Similarity=0.205 Sum_probs=192.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhh
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHFLSCCSRML 277 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l 277 (780)
-|+|++|......+......+..+.++.+..|.+++...... .....+. ..+..+|.+.+.+....+.+.+..
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~---- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK--RLLRALLRRALRRADAVIAVSEALADELKALG---- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch--hhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc----
Confidence 389999965544333333333445789999998765432211 1223333 345578999999987766664310
Q ss_pred CceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHH
Q 003999 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357 (780)
Q Consensus 278 ~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~ 357 (780)
....++.++|+|+|...+..... .....+ ....++.+++++|++++.||+..+++|++
T Consensus 168 ----------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~ 225 (377)
T cd03798 168 ----------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALA 225 (377)
T ss_pred ----------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHH
Confidence 11236788999999987764211 111111 11246789999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeec
Q 003999 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 358 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
.+.+++|+++ |+.+|. +++... +.++++..+ . .+.+.+.+.++.+++..+|+.||+++.|
T Consensus 226 ~~~~~~~~~~----l~i~g~-----~~~~~~----~~~~~~~~~----~---~~~v~~~g~~~~~~~~~~~~~ad~~i~~ 285 (377)
T cd03798 226 RLLKKRPDVH----LVIVGD-----GPLREA----LEALAAELG----L---EDRVTFLGAVPHEEVPAYYAAADVFVLP 285 (377)
T ss_pred HHHhcCCCeE----EEEEcC-----CcchHH----HHHHHHhcC----C---cceEEEeCCCCHHHHHHHHHhcCeeecc
Confidence 9988777655 776653 233222 233333222 1 1233456789999999999999999999
Q ss_pred cCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 438 AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 438 S~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
|..||+|++++|||+|| .|+|+|+.+|..+.+. +|++++|.|+++++++|.++++++.
T Consensus 286 ~~~~~~~~~~~Ea~~~G-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 286 SLREGFGLVLLEAMACG-------------------LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPW 346 (377)
T ss_pred hhhccCChHHHHHHhcC-------------------CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcH
Confidence 99999999999999997 4899999888877773 3689999999999999999999876
Q ss_pred HHHHHHHHHH-hhHhhhCCHHHHHHHHHHHHH
Q 003999 515 SEKQLRHEKH-YRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 515 ~er~~r~~~~-~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
. .+.++. ......+++..+++.+.+-++
T Consensus 347 ~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 347 L---RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred H---HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4 333343 444566788888888776654
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=99.81 E-value=8.2e-19 Score=190.74 Aligned_cols=194 Identities=16% Similarity=0.211 Sum_probs=143.5
Q ss_pred eecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCC
Q 003999 302 LPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381 (780)
Q Consensus 302 ~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (780)
+|.|||.+.|.+... ...+.++++...+++..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998865321 11111222222235678899999999999999999999999999999876777776541
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEec--CCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 382 SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID--RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 382 ~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
. ++.+ . +..+ .|+++. +.++.+++.++|+.||++|+||..||||++++||||||
T Consensus 192 --~-------~~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----- 247 (335)
T PHA01633 192 --K-------QFTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----- 247 (335)
T ss_pred --H-------HHHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-----
Confidence 1 1111 1 1111 366654 67788999999999999999999999999999999997
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCCC---------------------cEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSG---------------------AIRVNPWDIDAVADAMTLAINMRDSEKQ 518 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~ 518 (780)
.|+|+|..+|..+..++ |+.++++|++++|++|.+++.+++ +.
T Consensus 248 --------------~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~ 311 (335)
T PHA01633 248 --------------TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--RE 311 (335)
T ss_pred --------------CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hh
Confidence 48888887776664321 457888999999999999988864 33
Q ss_pred HHHHHHhhHhhhCCHHHHHHHHH
Q 003999 519 LRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 519 ~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
+|..+.++..+++|+..-+++++
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 33456678888999888777765
No 67
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.81 E-value=2.8e-18 Score=190.40 Aligned_cols=264 Identities=15% Similarity=0.065 Sum_probs=181.2
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCC-ChhHhhcCCC---hHHHHHhhhcCCEEEeecHHHHHHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP-SSEIYRTLPV---RDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP-~~e~~~~lp~---r~eil~~ll~~Dligf~t~~y~~~Fl~~~ 273 (780)
..|++.+|-.+.... .+.......+...++|...- ....-...++ .+.++..+-.+|.|.+.+..-.+.+...
T Consensus 99 ~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~- 175 (372)
T cd04949 99 KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQ- 175 (372)
T ss_pred CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHH-
Confidence 359999987776654 22333345567778885421 1100001112 2345555667899998888666666431
Q ss_pred HhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHH
Q 003999 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (780)
Q Consensus 274 ~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l 353 (780)
++. ..++.++|+|++...+.... .....+..++++||+.+.||+..++
T Consensus 176 ---~~~----------------~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li 223 (372)
T cd04949 176 ---FGN----------------YNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLI 223 (372)
T ss_pred ---hCC----------------CCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHH
Confidence 111 11277899999987765310 0113567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcce
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 433 (780)
+|+.++.+++|+++ |+.+|.. ++...+ ..++.+. +..+ .|. +.| ..+++.++|+.||+
T Consensus 224 ~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~----~~~~~~~----~~~~--~v~-~~g--~~~~~~~~~~~ad~ 281 (372)
T cd04949 224 KAFAKVVKQVPDAT----LDIYGYG-----DEEEKL----KELIEEL----GLED--YVF-LKG--YTRDLDEVYQKAQL 281 (372)
T ss_pred HHHHHHHHhCCCcE----EEEEEeC-----chHHHH----HHHHHHc----CCcc--eEE-EcC--CCCCHHHHHhhhhE
Confidence 99999999999877 7777742 222223 3333332 2211 244 444 35679999999999
Q ss_pred eeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC-CccccCC---CcEEECCCCHHHHHHHHHHH
Q 003999 434 CIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 434 ~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (780)
+|+||..||||++.+|||+|| .|+|+|... |..+.+. .|++++|.|++++|++|..+
T Consensus 282 ~v~~S~~Eg~~~~~lEAma~G-------------------~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~l 342 (372)
T cd04949 282 SLLTSQSEGFGLSLMEALSHG-------------------LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIEL 342 (372)
T ss_pred EEecccccccChHHHHHHhCC-------------------CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHH
Confidence 999999999999999999997 488999876 6666662 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
+++++ .+....+..++...++++..+++
T Consensus 343 l~~~~-~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 343 LNDPK-LLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred HcCHH-HHHHHHHHHHHHHHHhhHHHHHh
Confidence 99864 45555666777777777666654
No 68
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.80 E-value=3.3e-19 Score=181.84 Aligned_cols=177 Identities=24% Similarity=0.248 Sum_probs=132.2
Q ss_pred eEEeCCCCCCCCCCCCC-CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceE
Q 003999 593 AIFLDYDGTVVPETSII-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWE 671 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~ 671 (780)
+|++|+||||++ .+ ..++++++++|++|+++ |+.|+|+|||+...+.+++..+ +.++|++||++++..++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 689999999998 44 67999999999999996 7999999999999999999875 478999999999987655555
Q ss_pred ecCCCcChhH---HHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC-CCeEEE-EcC
Q 003999 672 TNHLGADLEW---KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN-EPAVVK-RGQ 746 (780)
Q Consensus 672 ~~~~~~d~~w---k~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~-~~v~v~-~g~ 746 (780)
. .......| .+.+..+++.+.+.+++..+|.+...+.++|+... .......++...++....+ .++.+. ++.
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 152 (204)
T TIGR01484 76 E-PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYVGK 152 (204)
T ss_pred c-ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEecC
Confidence 3 11010111 12333445555667788888999999999998751 1111223444555544222 347777 799
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 747 HIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+++||.|+|++||.+++.++++++++..+|.
T Consensus 153 ~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~ 183 (204)
T TIGR01484 153 TDLEVLPAGVDKGSALQALLKELNGKRDEIL 183 (204)
T ss_pred CEEEEecCCCChHHHHHHHHHHhCCCHHHEE
Confidence 9999999999999999999999999886553
No 69
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.79 E-value=1e-17 Score=180.06 Aligned_cols=260 Identities=14% Similarity=0.089 Sum_probs=177.4
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
-|+|++|+.+...+...+... ..++.+..|..++...... .+....-..+-.+|.+.+.+......+.
T Consensus 84 ~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-------- 151 (348)
T cd03820 84 PDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-------- 151 (348)
T ss_pred CCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--------
Confidence 399999998822222222221 1488888888765332111 0110122234468888887775441110
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|+++
T Consensus 152 --------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 152 --------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred --------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 0112357889999998765421 12457899999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+.+.+|+++ |+.+|. +++... +.+++.+.+. .+.+.+.+. .+++..+|+.||++++||
T Consensus 203 l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps 260 (348)
T cd03820 203 IAKKHPDWK----LRIVGD-----GPEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTS 260 (348)
T ss_pred HHhcCCCeE----EEEEeC-----CCCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCc
Confidence 988888765 776763 233222 3334443321 123334444 689999999999999999
Q ss_pred CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C---CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 439 VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S---GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 439 ~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
..||||++++|||+|| .|+|+|...|..+.+ . .|+++++.|++++|++|.++++.++
T Consensus 261 ~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 261 RFEGFPMVLLEAMAFG-------------------LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE 321 (348)
T ss_pred cccccCHHHHHHHHcC-------------------CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 9999999999999997 488999876554444 2 5899999999999999999998764
Q ss_pred HHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 515 SEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 515 ~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
.++...+..++.++++++...+++|.
T Consensus 322 -~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 322 -LRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred -HHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 34444455677888899888888764
No 70
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.79 E-value=3e-17 Score=178.29 Aligned_cols=262 Identities=18% Similarity=0.183 Sum_probs=177.6
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~F 269 (780)
++++..++ |+|++|.+..+.++.+...+...+++++++|-.++.. +....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHH
Confidence 34444555 8999998855544433222334689999999765422 11111111 1288888777655555
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCCh
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi 349 (780)
.+ .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 42 11 01246889999999987753210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|+..+.+ ++++ |+.+|... ......... +. -..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~-----------~~--~~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL-----------EG--DPRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh-----------cC--CCeEE-EeCCCCHHHHHHHHH
Confidence 999999999866 5554 87776422 211111111 10 01254 557889999999999
Q ss_pred hcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 430 VAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 430 ~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
.||++++||. .||++++++|||+|| .|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 322 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAG-------------------VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAA 322 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCC-------------------CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHH
Confidence 9999999998 799999999999997 4899999988888773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
|.++++.+. .++...+..++.++. ..+++.+++
T Consensus 323 i~~l~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 323 LERLIDDPD-LLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHhChH-HHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 999999654 344444555555543 445554443
No 71
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.79 E-value=3.6e-18 Score=195.22 Aligned_cols=261 Identities=14% Similarity=0.106 Sum_probs=164.7
Q ss_pred CEEEEeCC-ccchH--HHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH--HH
Q 003999 200 DCVWVHDY-HLMVL--PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC--CS 274 (780)
Q Consensus 200 DiVwvhDy-hl~ll--p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~--~~ 274 (780)
|+||+|.. ||-.. +..+.+++. +++..+|+.||. +++.-.. ..++.++ -.++++|+.. |+
T Consensus 436 DVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD 500 (794)
T PLN02501 436 DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCH 500 (794)
T ss_pred CEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCC
Confidence 99999984 45455 334555543 688899999984 4332111 1111110 1133334433 56
Q ss_pred hhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcC---CCeEEEEeccccccCChHH
Q 003999 275 RMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD---GKKLILGIDDMDIFKGISL 351 (780)
Q Consensus 275 r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~---~~~vil~Vdrld~~KGi~~ 351 (780)
.++.++.... .+. + ..|.. .+|||++.|.+... . ... +++. ..+.+++||||.+.||+..
T Consensus 501 ~VIaPS~atq------~L~-~-~vI~n-VnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa~EKGld~ 563 (794)
T PLN02501 501 KVLRLSAATQ------DLP-K-SVICN-VHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMVWAKGYRE 563 (794)
T ss_pred EEEcCCHHHH------Hhc-c-cceee-cccccccccCCcch---h----HHH-HhcCCccccCceEEEEcccccCCHHH
Confidence 6665542221 111 1 11221 15999998875321 1 111 2221 2355899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
+|+|+..+.++.|+++ |+++| +|++.+++ ++++.+.+. .|.|++ .. ++..++|+.|
T Consensus 564 LLeAla~L~~~~pnvr----LvIVG-----DGP~reeL----e~la~eLgL--------~V~FLG-~~--dd~~~lyasa 619 (794)
T PLN02501 564 LIDLLAKHKNELDGFN----LDVFG-----NGEDAHEV----QRAAKRLDL--------NLNFLK-GR--DHADDSLHGY 619 (794)
T ss_pred HHHHHHHHHhhCCCeE----EEEEc-----CCccHHHH----HHHHHHcCC--------EEEecC-CC--CCHHHHHHhC
Confidence 9999999988888765 88776 45654444 444444321 255554 32 3455899999
Q ss_pred ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHH
Q 003999 432 ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTL 508 (780)
Q Consensus 432 Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~ 508 (780)
||||+||.+||||+|++|||||| .|+|+|...|.. .+ + ++++ +.|.++++++|.+
T Consensus 620 DVFVlPS~sEgFGlVlLEAMA~G-------------------lPVVATd~pG~e-~V~~g~nGll--~~D~EafAeAI~~ 677 (794)
T PLN02501 620 KVFINPSISDVLCTATAEALAMG-------------------KFVVCADHPSNE-FFRSFPNCLT--YKTSEDFVAKVKE 677 (794)
T ss_pred CEEEECCCcccchHHHHHHHHcC-------------------CCEEEecCCCCc-eEeecCCeEe--cCCHHHHHHHHHH
Confidence 99999999999999999999997 488999887743 34 2 3443 3799999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 509 aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
+|++++. + ..++. ..+++|..-++++++..
T Consensus 678 LLsd~~~-r-l~~~a----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 678 ALANEPQ-P-LTPEQ----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHhCchh-h-hHHHH----HhhCCHHHHHHHHHHhh
Confidence 9998752 2 22222 33677777777776543
No 72
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.78 E-value=9.5e-18 Score=189.26 Aligned_cols=268 Identities=14% Similarity=0.080 Sum_probs=166.9
Q ss_pred HHHHcCCCCCEEEEeCCccc-hH--HHHHHHhcCCCcEEEEEeCCCCChhHhhcCC--ChHHHHHhhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLM-VL--PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~-ll--p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp--~r~eil~~ll~~Dligf~t~~y 265 (780)
+++..+| |+|++|+.-.+ .+ ...+++++ .. ++.++|+.|+ ++++.-. .....+...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHH
Confidence 3444566 89999995444 43 44555554 34 7779999885 3332211 1112221111 122
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-C-C--CeEEEEec
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-D-G--KKLILGID 341 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~Vd 341 (780)
++.| .|+.++..+... . ++.. .+...+.|||.+.|.+... . +++.+ + + .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~-----~l~~---~~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-Q-----DYPR---SIICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-H-----HHhh---CEEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEe
Confidence 2222 144444333211 0 0110 1222357999998864321 0 12222 2 2 35799999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCH
Q 003999 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421 (780)
Q Consensus 342 rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~ 421 (780)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.++++ +++.+++. .++++.+..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVK----AAAEKLEL--------DVRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHH----HHHHhcCC--------cEEEECCCCCH
Confidence 99999999999999999988888865 77775 567655554 44444321 13346665443
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCC
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWD 498 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d 498 (780)
+ ++|+.+||||+||.+||||+|.+|||||| .|+|++...| .+.+ + +++.+ .|
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G-------------------~PVVa~~~~~-~~~v~~~~ng~~~--~~ 349 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAMG-------------------KIVVCANHPS-NEFFKQFPNCRTY--DD 349 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHcC-------------------CcEEEecCCC-cceeecCCceEec--CC
Confidence 3 69999999999999999999999999997 4888888776 4556 2 36666 48
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHH
Q 003999 499 IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
.++++++|.++|+.++.+...+ ....++|..-+++|++.++
T Consensus 350 ~~~~a~ai~~~l~~~~~~~~~~------a~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 350 GKGFVRATLKALAEEPAPLTDA------QRHELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHHccCchhHHHH------HHHhCCHHHHHHHHHHHhc
Confidence 9999999999998654322211 1237788888888776654
No 73
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.78 E-value=1.4e-17 Score=184.61 Aligned_cols=240 Identities=13% Similarity=0.097 Sum_probs=165.3
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhc-CCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRF-NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~ 268 (780)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.++
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34455566 899999987766666666543 23455666776554322111 12235688888777655544
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecccc--cc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD--IF 346 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld--~~ 346 (780)
+.. .++. ..++.++|+|||.+.+.... + +..++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 22577889999976543211 1 013467899999996 46
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC--CHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV--PRFEK 424 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v--~~~el 424 (780)
||+..+++|+.++ .+ ++.|+.+|. |++.+ ++++++++.|.. ..|+|. |.+ +.+++
T Consensus 195 k~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~f~-G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQT---TG----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRIIWH-GWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhh---CC----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEEEe-cccCCcHHHH
Confidence 9999999999876 22 355888873 44433 344555444321 126544 444 55899
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC-CCCccccCC---CcEEECCCCHH
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCSPSLS---GAIRVNPWDID 500 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~al~VnP~d~~ 500 (780)
.++|+.||++|+||..||||++++|||||| .|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-------------------~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYG-------------------IPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcC-------------------CCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 999999999999999999999999999997 4899999 888887773 48999999999
Q ss_pred HHHHHHHHHHcCCH
Q 003999 501 AVADAMTLAINMRD 514 (780)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (780)
++|++|.++++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999999875
No 74
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.78 E-value=3.3e-17 Score=176.88 Aligned_cols=277 Identities=17% Similarity=0.146 Sum_probs=191.0
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcC-CChHHHHH-hhhcCCEEEeecHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTL-PVRDEILR-GLLNCDLIGFHTFDYARHF 269 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-p~r~eil~-~ll~~Dligf~t~~y~~~F 269 (780)
.+..+| |+|++|..+..++..++++.....++.+..|...+........ .....+-+ .+-.+|.+.+.+....+.+
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 344555 8999998887777777776566778888888653321100000 00011111 2335799999888877776
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCCh
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi 349 (780)
.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||+
T Consensus 154 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 541 100 01235677899999887754211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|++.+.+++|+++ |+.+|.... .+ ..... ++...+. ...|.+++ . .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~------~~~v~~~g-~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGL------EGRVEFLG-F--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCC------cceEEEee-c--cccHHHHHH
Confidence 999999999988788765 877774321 11 11111 1222211 12366554 3 678999999
Q ss_pred hcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHH
Q 003999 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAM 506 (780)
Q Consensus 430 ~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (780)
.||++++||.+||||++++|||+|| .|+|+|..+|..+.+. .|+++++.|+++++++|
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G-------------------~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i 323 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMG-------------------RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAI 323 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcC-------------------CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHH
Confidence 9999999999999999999999997 4899999999988873 38999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHH
Q 003999 507 TLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l 541 (780)
.++++.++ .+....+..+++ ...+++..+++.++
T Consensus 324 ~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 324 ERLIEDPE-LRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99887764 455555666777 57788888888765
No 75
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.77 E-value=6e-17 Score=183.27 Aligned_cols=272 Identities=10% Similarity=0.050 Sum_probs=173.0
Q ss_pred CCEEEEeCCccc--hHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH---HH---HH-hh-hcCCEEEeecHHHHHH
Q 003999 199 DDCVWVHDYHLM--VLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD---EI---LR-GL-LNCDLIGFHTFDYARH 268 (780)
Q Consensus 199 ~DiVwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~---ei---l~-~l-l~~Dligf~t~~y~~~ 268 (780)
.|+|++|..... .+...+-.+..+.|+++.+|.-+++..-.. .+... .+ ++ .+ -.||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 499999985432 222333233457899999997543211010 11000 11 11 12 2478777777654333
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHH---------------Hc--
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEK---------------QF-- 331 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~---------------~~-- 331 (780)
+.+ .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceecC
Confidence 321 11 123467889999 4566654311 1 11111111 01
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHh------CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ------HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g 405 (780)
++..++++++|+.+.||+..+++|++.+.+. +|+++ |+++|. |+..+ ++++++++.+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~----l~ivG~-----G~~~~----~l~~~~~~~~---- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLL----CIITGK-----GPLKE----KYLERIKELK---- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEE----EEEEec-----CccHH----HHHHHHHHcC----
Confidence 2356888999999999999999999998763 35544 887773 44433 4444544432
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcceeeec---cCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC
Q 003999 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN---AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI 482 (780)
Q Consensus 406 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (780)
...++++.+.++.+++..+|+.||++|++ +..+||+++++|||||| .|+|+|...
T Consensus 293 ---l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G-------------------~PVI~s~~~ 350 (415)
T cd03816 293 ---LKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCALDFK 350 (415)
T ss_pred ---CCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC-------------------CCEEEeCCC
Confidence 23478788889999999999999999864 33588999999999997 489999998
Q ss_pred CccccCC---CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 483 GCSPSLS---GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 483 G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
|+.+.+. +|++|+ |++++|++|.++++++ +++++.+.+..+++.+ .+|...+.
T Consensus 351 ~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 351 CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 8888773 488884 9999999999999982 4455555555666653 44555544
No 76
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.77 E-value=2.9e-16 Score=176.52 Aligned_cols=264 Identities=14% Similarity=0.101 Sum_probs=171.7
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhc------CCChH------H----HHH-hhhcCCEEEee
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT------LPVRD------E----ILR-GLLNCDLIGFH 261 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~------lp~r~------e----il~-~ll~~Dligf~ 261 (780)
-|+|++|...+. .++..+..+++.++..|.-. ++.|.. .|.+. . +-+ .+-.+|.|.+.
T Consensus 105 ~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~ 179 (397)
T TIGR03087 105 VDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATFV 179 (397)
T ss_pred CCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEEc
Confidence 499999854332 34433334667777777421 111111 11110 0 001 12357888887
Q ss_pred cHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEe
Q 003999 262 TFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGI 340 (780)
Q Consensus 262 t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~V 340 (780)
+....+.+.+. . .....++.++|+|||.+.|.+....+ ..+ .++++|+++
T Consensus 180 S~~~~~~l~~~----~---------------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~ 230 (397)
T TIGR03087 180 SRAEAELFRRL----A---------------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFT 230 (397)
T ss_pred CHHHHHHHHHh----C---------------CCCCCCeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEE
Confidence 77665555321 0 11123578899999999886432100 112 356799999
Q ss_pred ccccccCChHHHH----HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEec
Q 003999 341 DDMDIFKGISLKL----LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID 416 (780)
Q Consensus 341 drld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~ 416 (780)
||+++.||+..++ .++..+.+++|+++ |+++|. +++ .+++++. .. ..|++ .
T Consensus 231 G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~----~~------~~V~~-~ 285 (397)
T TIGR03087 231 GAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALA----AL------PGVTV-T 285 (397)
T ss_pred EecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhc----cC------CCeEE-e
Confidence 9999999999887 56667777889877 887763 222 1233321 11 12654 4
Q ss_pred CCCCHHHHHHHHHhcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC--CCcEE
Q 003999 417 RPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--SGAIR 493 (780)
Q Consensus 417 ~~v~~~el~aly~~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~al~ 493 (780)
|.++ ++..+|+.||++|+||. .||++++.+|||||| .|+|+|..++..... +.+++
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G-------------------~PVV~t~~~~~~i~~~~~~g~l 344 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA-------------------KPVVASPEAAEGIDALPGAELL 344 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC-------------------CCEEecCcccccccccCCcceE
Confidence 6676 68999999999999997 699999999999997 488888764322111 23788
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHH
Q 003999 494 VNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDL 544 (780)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l 544 (780)
+. .|++++|++|.+++++++ .++...++.++++ ..+++...++++.+-+
T Consensus 345 v~-~~~~~la~ai~~ll~~~~-~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 345 VA-ADPADFAAAILALLANPA-EREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred eC-CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 86 899999999999998654 4566667788887 4689998888876654
No 77
>PHA01630 putative group 1 glycosyl transferase
Probab=99.77 E-value=3.8e-17 Score=178.97 Aligned_cols=234 Identities=14% Similarity=0.075 Sum_probs=160.8
Q ss_pred CCcEEEEEeCCCCChhHhhcCCChHHHHHhh--hcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEE
Q 003999 222 RIKLGFFLHSPFPSSEIYRTLPVRDEILRGL--LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299 (780)
Q Consensus 222 ~~~i~~flH~PfP~~e~~~~lp~r~eil~~l--l~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i 299 (780)
..++++..|... +....++.-. -.+|.|...+......+.+ .+.. ...++
T Consensus 69 ~~~~v~e~~~~~---------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~-----~g~~--------------~~~~i 120 (331)
T PHA01630 69 GKNIVFEVADTD---------AISHTALYFFRNQPVDEIVVPSQWSKNAFYT-----SGLK--------------IPQPI 120 (331)
T ss_pred CCceEEEEEeec---------hhhHHHHHHHhhccCCEEEECCHHHHHHHHH-----cCCC--------------CCCCE
Confidence 346666666522 1223333333 2488888888766555532 1110 01257
Q ss_pred EEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC
Q 003999 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (780)
.++|+|||.+.|.+... ...++.++++++|+.+.||++.+++|++++.+++|+++ |+.+|.
T Consensus 121 ~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-- 181 (331)
T PHA01630 121 YVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-- 181 (331)
T ss_pred EEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC--
Confidence 78999999988854210 01245566677889999999999999999988887765 777762
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
+.. +. + +. +..+ +.+.++.+++..+|+.||+||+||..||||++++||||||
T Consensus 182 ---~~~--~~--~---l~-------~~~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----- 233 (331)
T PHA01630 182 ---NML--DP--R---LF-------GLNG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----- 233 (331)
T ss_pred ---ccc--ch--h---hc-------cccc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC-----
Confidence 111 11 1 10 1111 1246789999999999999999999999999999999997
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccC-C--CcEE--------------------ECCCCHHHHHHHHHHHHcCC-HH
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIR--------------------VNPWDIDAVADAMTLAINMR-DS 515 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~--------------------VnP~d~~~~A~ai~~aL~m~-~~ 515 (780)
.|+|+|..+|.++.+ + +|++ ++| |.+++++++.++|..+ ++
T Consensus 234 --------------~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~ 298 (331)
T PHA01630 234 --------------LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPE 298 (331)
T ss_pred --------------CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHH
Confidence 489999988888776 3 2444 455 7889999999999875 23
Q ss_pred HHHHHHHH-HhhHhhhCCHHHHHHHHHHHHH
Q 003999 516 EKQLRHEK-HYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 516 er~~r~~~-~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
+++.+++. ...+.+++++...++.+++-++
T Consensus 299 ~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 299 KKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44444444 4456678999999999887765
No 78
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=1.2e-16 Score=174.76 Aligned_cols=259 Identities=17% Similarity=0.153 Sum_probs=174.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhh
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHFLSCCSRML 277 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l 277 (780)
.|+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..||.|.+.+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986654332222222 46788889996532211110 1111222 2455789998888776654432 1
Q ss_pred CceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHH
Q 003999 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357 (780)
Q Consensus 278 ~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~ 357 (780)
+ ....++.++|+|+|...+..... . .......-.++.+|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~-----~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA-----L-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch-----h-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01135788999999887754211 0 0111111246789999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeec
Q 003999 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 358 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
++. ++.|+.+|. ++... ++.+++.+.+ .. ..|+ +.+.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~~----~~~~~~~~~~----~~--~~V~-~~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLEA----ELEALAAALG----LL--DRVR-FLGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhHH----HHHHHHHhcC----Cc--ceEE-EcCCCCHHHHHHHHHhCCEEEeC
Confidence 863 355877763 33322 3344443322 11 1365 45789999999999999999999
Q ss_pred cC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC----CcEEECCCCHHHHHHHHHHHHc
Q 003999 438 AV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS----GAIRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 438 S~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~ 511 (780)
|. .||||++.+|||+|| .|+|+|+.+|..+.+. .|++++|.|+++++++|.++++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g-------------------~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFG-------------------KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred CcccccccchHHHHHHHcC-------------------CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 96 599999999999997 4899999888877662 3899999999999999999999
Q ss_pred CCHHHHHHHHHHHhhHhhh
Q 003999 512 MRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 512 m~~~er~~r~~~~~~~V~~ 530 (780)
+++ +++...+..++++.+
T Consensus 332 ~~~-~~~~~~~~~~~~~~~ 349 (357)
T cd03795 332 DPE-LRERLGEAARERAEE 349 (357)
T ss_pred CHH-HHHHHHHHHHHHHHH
Confidence 764 555556667777654
No 79
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.74 E-value=2.3e-16 Score=171.31 Aligned_cols=245 Identities=13% Similarity=0.081 Sum_probs=164.3
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.+..++ |+|++|+....++ + .+..+.++.+++|..++.... .........+.+-+-+...++.+.
T Consensus 83 ~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~- 147 (335)
T cd03802 83 LAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP- 147 (335)
T ss_pred HhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc-
Confidence 334444 8999999887765 2 234578999999987643211 123334445554444433221110
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHH
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~ 351 (780)
.. .++.++|+|||++.|... ..++.+++++||+.+.||+..
T Consensus 148 -------------------~~----~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~ 188 (335)
T cd03802 148 -------------------PL----PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHL 188 (335)
T ss_pred -------------------cc----cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHH
Confidence 00 357889999999887531 134678999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
+++|+++ ++++ |+++|... +...+...+.+... ++ ..|+ +.|.++.+++..+|+.|
T Consensus 189 li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 189 AIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNA 244 (335)
T ss_pred HHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhC
Confidence 9998754 3444 77777422 21122222222110 11 1255 45789999999999999
Q ss_pred ceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHH
Q 003999 432 ECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMT 507 (780)
Q Consensus 432 Dv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (780)
|++++||. .||||++++|||||| .|+|+|..+|..+.+. .|+++++ +++++++|.
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G-------------------~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~ 303 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACG-------------------TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVA 303 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcC-------------------CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHH
Confidence 99999997 599999999999997 4899999999888773 4899987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHH
Q 003999 508 LAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQ 542 (780)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~ 542 (780)
+++.++.. ..++.+ .++++..-++++++
T Consensus 304 ~l~~~~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 304 RADRLDRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHhccHHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 99775431 122222 55777766666654
No 80
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.74 E-value=3e-16 Score=172.85 Aligned_cols=246 Identities=16% Similarity=0.146 Sum_probs=164.1
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCC----Chh-HhhcCCC-------------hHHHHHhhhcCCEEE
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP----SSE-IYRTLPV-------------RDEILRGLLNCDLIG 259 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e-~~~~lp~-------------r~eil~~ll~~Dlig 259 (780)
+-|+|+++..... ...+ ..++.+..+++|.|.+ ..+ .....+. +....+.+..+|.|.
T Consensus 83 ~~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 83 GYDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred CCCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 3589987653222 1122 3457788888898631 111 1111110 001112245688888
Q ss_pred eecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEE
Q 003999 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILG 339 (780)
Q Consensus 260 f~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~ 339 (780)
..+....+.+... .+ . ...++|+|+|.+.|.... ..++++++
T Consensus 159 ~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~ 200 (351)
T cd03804 159 ANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLS 200 (351)
T ss_pred ECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEE
Confidence 8887666555321 11 1 235678999988775321 23567999
Q ss_pred eccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 340 IDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 340 Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
+||+.+.||+..+++|++++ | ++ |+.+|. |++.+++++ .. . ..|.+ .|.+
T Consensus 201 ~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~----~----~~V~~-~g~~ 250 (351)
T cd03804 201 VGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA----G----PNVTF-LGRV 250 (351)
T ss_pred EEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc----C----CCEEE-ecCC
Confidence 99999999999999999865 3 44 777773 343333322 11 1 23665 4689
Q ss_pred CHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECC
Q 003999 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNP 496 (780)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP 496 (780)
+.+++.++|+.||++++||. ||||++++|||||| .|+|+|..+|..+.+ + .|++++|
T Consensus 251 ~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G-------------------~Pvi~~~~~~~~e~i~~~~~G~~~~~ 310 (351)
T cd03804 251 SDEELRDLYARARAFLFPAE-EDFGIVPVEAMASG-------------------TPVIAYGKGGALETVIDGVTGILFEE 310 (351)
T ss_pred CHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcC-------------------CCEEEeCCCCCcceeeCCCCEEEeCC
Confidence 99999999999999999999 99999999999997 489999998888777 3 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHH
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~ 539 (780)
.|++++|++|.+++++++ +. .+.+++.+..+++.+..++
T Consensus 311 ~~~~~la~~i~~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 311 QTVESLAAAVERFEKNED-FD---PQAIRAHAERFSESRFREK 349 (351)
T ss_pred CCHHHHHHHHHHHHhCcc-cC---HHHHHHHHHhcCHHHHHHH
Confidence 999999999999999874 11 2234444555665555443
No 81
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.73 E-value=3e-16 Score=168.69 Aligned_cols=248 Identities=18% Similarity=0.121 Sum_probs=167.2
Q ss_pred HcCCCCCEEEEeCC-ccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 194 VINPDDDCVWVHDY-HLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 194 ~~~~~~DiVwvhDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
..++ |+|++|++ ...++..+. .+. +.++.+..|..++..... ..+........+..+|.+.+.+....+.+.+.
T Consensus 79 ~~~~--dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 153 (353)
T cd03811 79 KEKP--DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL 153 (353)
T ss_pred hcCC--CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHh
Confidence 3455 89999998 444444443 333 789999999887542211 11111122334557899888887766555432
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
. + ....++.++|+|+|...+...... . .. .....++.+++++||+++.||+...
T Consensus 154 ~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~~i~~~g~~~~~k~~~~~ 207 (353)
T cd03811 154 L----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LE-LGIPPDGPVILAVGRLSPQKGFDTL 207 (353)
T ss_pred h----c---------------CCccccEEecCCcChhhcCcccch-----h-hh-cCCCCCceEEEEEecchhhcChHHH
Confidence 1 1 013467889999998877643210 0 00 0112567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 432 (780)
++|++.+.++.++++ |+.+|. ++...+ +.+++.+.+.. ..|.+. +.+ +++..+|+.||
T Consensus 208 i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~~-g~~--~~~~~~~~~~d 265 (353)
T cd03811 208 IRAFALLRKEGPDAR----LVILGD-----GPLREE----LEALAKELGLA------DRVHFL-GFQ--SNPYPYLKAAD 265 (353)
T ss_pred HHHHHHhhhcCCCce----EEEEcC-----CccHHH----HHHHHHhcCCC------ccEEEe-ccc--CCHHHHHHhCC
Confidence 999999988777765 777763 233223 33444443321 125544 443 46889999999
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHH---HHH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA---DAM 506 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A---~ai 506 (780)
+++.||..||||++++|||+|| .|+|+|+.+|..+.+. .|++++|.|.++++ ++|
T Consensus 266 ~~i~ps~~e~~~~~~~Ea~~~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i 326 (353)
T cd03811 266 LFVLSSRYEGFPNVLLEAMALG-------------------TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL 326 (353)
T ss_pred EEEeCcccCCCCcHHHHHHHhC-------------------CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH
Confidence 9999999999999999999997 4899999998888773 48999999999995 444
Q ss_pred HHHHcCC
Q 003999 507 TLAINMR 513 (780)
Q Consensus 507 ~~aL~m~ 513 (780)
...+..+
T Consensus 327 ~~~~~~~ 333 (353)
T cd03811 327 LDLLLDP 333 (353)
T ss_pred HhccCCh
Confidence 4454443
No 82
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.72 E-value=9.2e-16 Score=168.39 Aligned_cols=265 Identities=13% Similarity=0.017 Sum_probs=172.0
Q ss_pred CEEEEeCCccc--hHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-----HhhhcCCEEEeecHHHHHHHHHH
Q 003999 200 DCVWVHDYHLM--VLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-----RGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 200 DiVwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-----~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. ....++ ..+..+|.|.+.+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 55666654433 33333433 368899998853111111110 111122 1244688888877654444321
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccccCChH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGIS 350 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~~KGi~ 350 (780)
. ++... .++|+|+|...+... .+.++++ .+++.++++||+.+.||+.
T Consensus 161 ---~---------------~~~~~---~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---K---------------YGRDS---TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---h---------------cCCCC---eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 1 11111 689999998765420 1122222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
.+++|+.++.. + +.|+.+|... ...++.+++.+ + .+.. ..|+ +.|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~---~----~~l~ivG~~~-----~~~~~~~~~~~---~----~~~~--~~V~-~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS---G----KKLVIVGNAD-----HNTPYGKLLKE---K----AAAD--PRII-FVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc---C----ceEEEEcCCC-----CcchHHHHHHH---H----hCCC--CcEE-EccccChHHHHHHHHh
Confidence 99999987632 3 4488787432 11123333322 1 1211 1355 4578999999999999
Q ss_pred cceeeeccCC-cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHH
Q 003999 431 AECCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTL 508 (780)
Q Consensus 431 ADv~vvtS~r-EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~ 508 (780)
||++++||.. ||||++++|||+|| .|+|+|..+|..+.+ .++..++|.|. +|++|.+
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYG-------------------CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcC-------------------CCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 9999999999 99999999999997 489999988887777 46888888776 9999999
Q ss_pred HHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHH
Q 003999 509 AINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDL 544 (780)
Q Consensus 509 aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l 544 (780)
++++++ .+....++.++++.+ +++..-++++++-+
T Consensus 327 l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999874 344445556776654 88888787777543
No 83
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.72 E-value=8.1e-16 Score=168.76 Aligned_cols=194 Identities=16% Similarity=0.188 Sum_probs=142.1
Q ss_pred EEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEecccc--ccCChHHHHHHHHHHHHh-CCCCCCce
Q 003999 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMD--IFKGISLKLLAMEQLLQQ-HPGMRGKV 370 (780)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld--~~KGi~~~l~A~~~ll~~-~P~~~~~v 370 (780)
.++.++|+|||.+.+.+.. . ...++.+ +++.+++.+++.. +.||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 3678999999998875421 1 2233444 3556666666654 499999999999988665 344 4
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC-HHHHHHHHHhcceeeeccCCcCCCcchhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP-RFEKSAYYAVAECCIVNAVRDGMNLVPYK 449 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~rEGmnLv~~E 449 (780)
.++.+|... ...+ . ..+ ..|. +.+.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~------~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP------P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh------c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 477776321 1000 0 111 1255 445777 88999999999999999999999999999
Q ss_pred hhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 003999 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYR 526 (780)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (780)
||+|| .|+|+|..+|..+.+. .|+++++.|++++|++|.++++.++ ++....++.++
T Consensus 284 am~~g-------------------~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~~~ 343 (365)
T cd03825 284 ALACG-------------------TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAARE 343 (365)
T ss_pred HHhcC-------------------CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHH
Confidence 99997 4889999888888773 4899999999999999999998654 45555566677
Q ss_pred Hhh-hCCHHHHHHHHHHHHH
Q 003999 527 YVS-THDVAYWARSFAQDLE 545 (780)
Q Consensus 527 ~V~-~~~~~~Wa~~~l~~l~ 545 (780)
++. .+++...++.+++-++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 774 5898888888886654
No 84
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.70 E-value=2.6e-16 Score=167.14 Aligned_cols=177 Identities=15% Similarity=0.148 Sum_probs=115.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCc-eEEecCccEEeeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~l-gliaenG~~ir~~~~~ 668 (780)
..|+|++|+||||++ .++.++++++++|+++++. |+.|+|+|||++..+.+.+..+... .+|++||++|.+.++.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARLREK-GVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 468999999999999 6777999999999999994 9999999999999999999887432 6999999999998432
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhc--CCCceeecccceEE------------E-ee----ccCC--CC---cccc--
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEA--TDGSNIEIKESALV------------W-HH----QDAD--PD---FGSC-- 722 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~--t~gs~iE~k~~~l~------------~-hy----r~ad--~d---~~~~-- 722 (780)
.... ..+ ++.+..+++...+. ....+......... . ++ ...+ .+ +...
T Consensus 78 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQK---PLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred Eeee---cCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 2322 233 45566666655332 11122221100000 0 00 0000 00 0001
Q ss_pred --cHHHHHHHHHHHhcCCCeEEEEcCe-EEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 723 --QAKELLDHLESVLANEPAVVKRGQH-IVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 723 --qa~el~~~L~~~l~~~~v~v~~g~~-~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
...++...+.+.+....+.+.++.. ++||.|+|+|||.|+++|++++|+++++|
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v 208 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEV 208 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHe
Confidence 1122333333333333455666554 49999999999999999999999997643
No 85
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.70 E-value=2.4e-15 Score=170.64 Aligned_cols=287 Identities=18% Similarity=0.182 Sum_probs=178.8
Q ss_pred HHHHHHHcCCCCCEEEEeCCccchHHHHHHH-hcCCCcEEEEEeCCCCC-hhHhhcCCChHHHHHhhh-cCCEEEeecHH
Q 003999 188 ADKVMEVINPDDDCVWVHDYHLMVLPTFLRK-RFNRIKLGFFLHSPFPS-SEIYRTLPVRDEILRGLL-NCDLIGFHTFD 264 (780)
Q Consensus 188 A~~v~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP~-~e~~~~lp~r~eil~~ll-~~Dligf~t~~ 264 (780)
..++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+. ...++.+ ..+.+.++ .+|.|..++..
T Consensus 116 ~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~ 188 (425)
T PRK05749 116 VRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEE 188 (425)
T ss_pred HHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHH
Confidence 4455677788 89999988765 444433 23467777665543322 2222211 23344444 48999999998
Q ss_pred HHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccc
Q 003999 265 YARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDM 343 (780)
Q Consensus 265 y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrl 343 (780)
..+.|.+ +|.. .. +.++|++ +.+.+.. +........+++++ +++++++++++.
T Consensus 189 ~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~----~~~~~~~~~~r~~~~~~~~vil~~~~~ 242 (425)
T PRK05749 189 DAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVP----PELAARAATLRRQLAPNRPVWIAASTH 242 (425)
T ss_pred HHHHHHH-----cCCC---------------CC-cEecccc-cccCCCC----hhhHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8877753 2321 12 4455552 3222211 11112345567777 678899999875
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhcc---CC---C-CcccEEEec
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY---GS---P-NYEPVVLID 416 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~---g~---~-~~~pV~~~~ 416 (780)
.|+...+++||.++++++|+++ |+++| ++++. ..++++++++.+-.+ .. . .-..|. +.
T Consensus 243 --~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~ 307 (425)
T PRK05749 243 --EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LG 307 (425)
T ss_pred --chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EE
Confidence 5889999999999998899876 77664 34442 123444444332211 00 0 001233 32
Q ss_pred CCCCHHHHHHHHHhcceeee-ccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----ccC-CC
Q 003999 417 RPVPRFEKSAYYAVAECCIV-NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSL-SG 490 (780)
Q Consensus 417 ~~v~~~el~aly~~ADv~vv-tS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-~~ 490 (780)
+ +..|+.++|+.||++++ +|..||+|++++|||||| .|+|.+...|.. +.+ .+
T Consensus 308 ~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G-------------------~PVI~g~~~~~~~e~~~~~~~~ 366 (425)
T PRK05749 308 D--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG-------------------VPVISGPHTFNFKEIFERLLQA 366 (425)
T ss_pred e--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC-------------------CCEEECCCccCHHHHHHHHHHC
Confidence 2 35799999999999666 788899999999999997 478877654432 222 35
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
|.++.|.|++++|++|.+++++++ .+..+.++.++++.++. .=+++.++.+.+
T Consensus 367 g~~~~~~d~~~La~~l~~ll~~~~-~~~~m~~~a~~~~~~~~--~~~~~~~~~l~~ 419 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLTDPD-ARQAYGEAGVAFLKQNQ--GALQRTLQLLEP 419 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhCc--cHHHHHHHHHHH
Confidence 777889999999999999998654 46666677888887762 333445544443
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=99.69 E-value=3e-15 Score=166.90 Aligned_cols=236 Identities=10% Similarity=-0.026 Sum_probs=154.7
Q ss_pred CEEEEeCCccch--HHHHHHHhcCCCcEEEEEeCCCCChhHhhc-C---CC----hHHHHHhh-hcCCEEEeecHHHHHH
Q 003999 200 DCVWVHDYHLMV--LPTFLRKRFNRIKLGFFLHSPFPSSEIYRT-L---PV----RDEILRGL-LNCDLIGFHTFDYARH 268 (780)
Q Consensus 200 DiVwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~~~-l---p~----r~eil~~l-l~~Dligf~t~~y~~~ 268 (780)
|+|++|..+.+. ++..+-.+..++|+.+++|..+.+ .+.. . +. ...+-+.+ -.+|.|...+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999877532 233333334568899999975421 1100 0 10 11111222 2478888877765554
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
..+. .| .. +.++|+|+ .+.|.+... . ..++ -+.+.++++++|+.+.||
T Consensus 180 l~~~----~g----------------~~--i~vi~n~~-~~~f~~~~~--~-----~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 180 LDQN----WG----------------IR--ATVLYDQP-PEFFRPASL--E-----IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHHh----cC----------------CC--eEEECCCC-HHHcCcCCc--h-----hccc--CCCcEEEEEeCceeccCC
Confidence 4320 11 11 57788884 466654211 0 1111 134567889999999999
Q ss_pred hHHHHHHHHHHHH-----------------hCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 349 ISLKLLAMEQLLQ-----------------QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 349 i~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
+..+++|+..+.. .+|++ .|+.+| +|++.++++ +.+++. |. ..
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i----~l~ivG-----~G~~~~~l~----~~~~~~----~l---~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPRL----LFIITG-----KGPQKAMYE----EKISRL----NL---RH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCCe----EEEEEe-----CCCCHHHHH----HHHHHc----CC---Cc
Confidence 9999999988742 34554 488887 455544444 444433 22 24
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeecc---CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNA---VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS---~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
|+++.+.++.+++..+|+.||+||+|+ ..|||+++.+|||||| .|+|+|..+|..+.+
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G-------------------~PVVa~~~gg~~eiv 348 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCAVSYSCIGELV 348 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC-------------------CCEEEecCCChHHHc
Confidence 777777789999999999999999853 3489999999999997 489999988888877
Q ss_pred -C--CcEEECCCCHHHHHHHHHHHH
Q 003999 489 -S--GAIRVNPWDIDAVADAMTLAI 510 (780)
Q Consensus 489 -~--~al~VnP~d~~~~A~ai~~aL 510 (780)
+ .|++|+ |++++|++|.++|
T Consensus 349 ~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 349 KDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred cCCCCeEEEC--CHHHHHHHHHHhC
Confidence 3 388886 6999999998865
No 87
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.69 E-value=5.8e-15 Score=166.96 Aligned_cols=295 Identities=20% Similarity=0.214 Sum_probs=198.4
Q ss_pred CCEEEEeCCccchHHHHHHHh---cCCCcEEEEEeCC-----CCChhHh--hcCCC---h----------HHHHHhhhcC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKR---FNRIKLGFFLHSP-----FPSSEIY--RTLPV---R----------DEILRGLLNC 255 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP~~e~~--~~lp~---r----------~eil~~ll~~ 255 (780)
.|||++||||+.|+|.++++. ...++.+|+.|.- |+ ..++ -.||. . .-+--|+..|
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~-~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFR-LQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccc-hhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 399999999999999999997 7789999999954 33 2222 23441 0 1222346678
Q ss_pred CEEEeecHHHHHHHHHHHHhhhCceeccCCceeE-EEEcCeEEEEEEeecCCCchhhhhhcC-----------CchhHHH
Q 003999 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIG-LDYFGRTVYIKILPVGVHMGRLESVLN-----------LPATATK 323 (780)
Q Consensus 256 Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~-~~~~gr~~~i~i~P~GId~~~~~~~~~-----------~~~~~~~ 323 (780)
|.|.--++.|+..-.. ...| .|..+ +.+ +.-++.-+-+|||.....+... .+.-.+.
T Consensus 210 d~vttVSptYa~Ei~t---~~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~n 278 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAEN 278 (487)
T ss_pred cEEEEECHHHHHhhcc---cccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHH
Confidence 9998888888866541 0010 00000 111 1123444556777665533211 0111222
Q ss_pred HHHHHHHc--C---CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 003999 324 IKEIEKQF--D---GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 324 ~~~lr~~~--~---~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 398 (780)
...|++++ + +.+++..|+|++..||++.+++|+..++++. ++ ||.+|.+ -..++..+..+++
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~ 345 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALAS 345 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHH
Confidence 34466666 2 5689999999999999999999999999987 55 7777742 1356778888888
Q ss_pred HHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV 478 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (780)
++..+.. +.--.+..-...+|+.||++++||..||+||+-+++|.-| +++|+
T Consensus 346 ~~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG-------------------tvpIv 397 (487)
T COG0297 346 RHPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG-------------------TLPIV 397 (487)
T ss_pred hcCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC-------------------CcceE
Confidence 8765432 1112345566789999999999999999999999999975 58899
Q ss_pred cCCCCccccCC----------C-cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh--hhCCHHHHHHHHHHHHH
Q 003999 479 SEFIGCSPSLS----------G-AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV--STHDVAYWARSFAQDLE 545 (780)
Q Consensus 479 Se~~G~~~~l~----------~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V--~~~~~~~Wa~~~l~~l~ 545 (780)
.+.+|.++.+. + |+++.|.|.++++.||.+|+..-..+... ++...... ..+++..=|.++.+-.+
T Consensus 398 ~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~-w~~~~~~~m~~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 398 RETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLL-WRKVQPNAMGADFSWDLSAKEYVELYK 476 (487)
T ss_pred cccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHH-HHHHHHhhcccccCchhHHHHHHHHHH
Confidence 99999988772 2 78898889999999999999765322220 12222222 45666777777776555
Q ss_pred HH
Q 003999 546 RA 547 (780)
Q Consensus 546 ~~ 547 (780)
..
T Consensus 477 ~~ 478 (487)
T COG0297 477 PL 478 (487)
T ss_pred HH
Confidence 43
No 88
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.67 E-value=1.1e-15 Score=162.95 Aligned_cols=177 Identities=18% Similarity=0.126 Sum_probs=111.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+.+.+..+. ..++|+.||+.|+...+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 47999999999998 667899999999999999 499999999999999999887763 3468999999998643332
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcC--------CCceeecccce-------EEEeeccCC------CCcc-------c
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESA-------LVWHHQDAD------PDFG-------S 721 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~~~-------l~~hyr~ad------~d~~-------~ 721 (780)
+.. ..++ .+.+.++++...+.. .+.+....... ..+.+...+ ..+. .
T Consensus 78 l~~--~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 152 (272)
T PRK15126 78 LHR--QDLP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH 152 (272)
T ss_pred EEe--ecCC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH
Confidence 221 2233 344555554432210 11111100000 000010000 0000 0
Q ss_pred ccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 722 CQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....++...+.+.+.. .+.+ .++..++||.|+|+|||.|+++|++++||++++|.
T Consensus 153 ~~~~~~~~~l~~~~~~-~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~ 208 (272)
T PRK15126 153 DDLTRLQIQLNEALGE-RAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCM 208 (272)
T ss_pred HHHHHHHHHHHHHhcC-CEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeE
Confidence 0112233333333322 2454 45678999999999999999999999999986653
No 89
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.66 E-value=7.1e-16 Score=162.45 Aligned_cols=176 Identities=15% Similarity=0.178 Sum_probs=118.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~ir~~~~ 667 (780)
+.+|++|+||||+++...+...++++.++++++.+ .|+.|+++|||+...+.+....++ .-.+|++||+.|+.++.
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~ 79 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGA 79 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCC
Confidence 35899999999998544456678999999999998 499999999999999998865432 12489999999987541
Q ss_pred ----CceEecCCCcChhHH-HHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCC--Ce
Q 003999 668 ----SEWETNHLGADLEWK-KIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE--PA 740 (780)
Q Consensus 668 ----~~w~~~~~~~d~~wk-~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~--~v 740 (780)
..|... ....|. +.+..+...+...++....+.+...+.+..... ++.++...+.+.+... .+
T Consensus 80 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 80 EVPDQHWAEY---LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CcCCHHHHHH---HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCE
Confidence 112111 112233 223333333333344443344445555543321 1233445555555443 34
Q ss_pred E-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 741 V-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 741 ~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. +.++..++||.|+++|||.|+++|++.+++++++|.
T Consensus 150 ~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i 187 (249)
T TIGR01485 150 KLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTL 187 (249)
T ss_pred EEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEE
Confidence 4 467889999999999999999999999999987664
No 90
>PRK10976 putative hydrolase; Provisional
Probab=99.66 E-value=1.2e-15 Score=162.19 Aligned_cols=177 Identities=12% Similarity=0.129 Sum_probs=111.4
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+.+.+..++ ..++||.||+.++..++..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 47999999999998 567899999999999999 599999999999999999888764 3468999999998643322
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhc---------CCCceeecccce---------EEEeec---cCCC-Cccc----c-
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKESA---------LVWHHQ---DADP-DFGS----C- 722 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~---------t~gs~iE~k~~~---------l~~hyr---~ad~-d~~~----~- 722 (780)
.. ....+ ++.+.++++...+. ..+.++...... ..+... ...+ ++.. .
T Consensus 78 i~--~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~ 152 (266)
T PRK10976 78 IF--SHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCD 152 (266)
T ss_pred eh--hhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcC
Confidence 21 12233 34455555544321 111111110000 000000 0000 0000 0
Q ss_pred cHH---HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 723 QAK---ELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 723 qa~---el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+ ++.+.+.+.+. ..+.+ .++..++||.|+|+|||.|+++|++++||++++|.
T Consensus 153 ~~~~~~~~~~~l~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~vi 210 (266)
T PRK10976 153 SHEKLLPLEQAINARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCI 210 (266)
T ss_pred CHHHHHHHHHHHHHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeE
Confidence 111 22223332222 23554 46778999999999999999999999999987653
No 91
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.64 E-value=4.9e-15 Score=157.74 Aligned_cols=175 Identities=13% Similarity=0.139 Sum_probs=109.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWNK 666 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~~ 666 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+.+.+..+. ..++|+.||+.|+...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~ 78 (270)
T PRK10513 3 IKLIAIDMDGTLLL---PDHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAA 78 (270)
T ss_pred eEEEEEecCCcCcC---CCCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECC
Confidence 58999999999998 567899999999999999 499999999999999998887763 1358999999998632
Q ss_pred -CC-ceEecCCCcChhHHHHHHHHHHHHHhc--------CCCceeecccce-----------EEEeeccC---CCC--cc
Q 003999 667 -TS-EWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESA-----------LVWHHQDA---DPD--FG 720 (780)
Q Consensus 667 -~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~~~-----------l~~hyr~a---d~d--~~ 720 (780)
+. .+.. ..+ .+.+..+++...+. ..+.+...+... +...+... ++. +.
T Consensus 79 ~~~~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (270)
T PRK10513 79 DGETVAQT---ALS---YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFP 152 (270)
T ss_pred CCCEEEec---CCC---HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCce
Confidence 32 2332 233 23344444433221 112222111100 00000000 000 00
Q ss_pred c-------ccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 721 S-------CQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 721 ~-------~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
. ....++...+...+. ..+.+ .++..++||.|+|+|||.|+++|++++|+++++|
T Consensus 153 k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v 215 (270)
T PRK10513 153 KVMMIDEPEILDAAIARIPAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEV 215 (270)
T ss_pred EEEEeCCHHHHHHHHHHhHHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHE
Confidence 0 011122222322222 23554 4677899999999999999999999999998665
No 92
>PTZ00174 phosphomannomutase; Provisional
Probab=99.64 E-value=8.6e-15 Score=154.07 Aligned_cols=175 Identities=17% Similarity=0.122 Sum_probs=106.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--CC-ceEEecCccEEeeCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EM-LGIAAEHGYFIRWNK 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~~-lgliaenG~~ir~~~ 666 (780)
+.|+|++|+||||++ .+++++++++++|++|.+. |++|+|+|||++..+.+.++.. .. .++|++||++|+..+
T Consensus 4 ~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~ 79 (247)
T PTZ00174 4 KKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDG 79 (247)
T ss_pred CCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECC
Confidence 468999999999998 7778999999999999995 9999999999999999888632 12 257999999999654
Q ss_pred CCceEecCC-CcChhHHHHHHHHHHHH-H----hcCCCceeecccceEEEeeccCCC------Cc---c--cccHHHHHH
Q 003999 667 TSEWETNHL-GADLEWKKIVEPVMRSY-T----EATDGSNIEIKESALVWHHQDADP------DF---G--SCQAKELLD 729 (780)
Q Consensus 667 ~~~w~~~~~-~~d~~wk~~v~~i~~~~-~----e~t~gs~iE~k~~~l~~hyr~ad~------d~---~--~~qa~el~~ 729 (780)
+..+....+ ..+.++...+...++.+ . ....+.+++.........+..... ++ . .....++.+
T Consensus 80 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (247)
T PTZ00174 80 ELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQ 159 (247)
T ss_pred eEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHH
Confidence 322222211 12333323333333221 0 112233433221111111110000 00 0 001123444
Q ss_pred HHHHHhcCCCeEEEE-cCeEEEEEeCCCCHHHHHHHHHHH
Q 003999 730 HLESVLANEPAVVKR-GQHIVEVKPQVLRPSSISVSLSLS 768 (780)
Q Consensus 730 ~L~~~l~~~~v~v~~-g~~~vEI~p~gvsKG~al~~Ll~~ 768 (780)
.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++
T Consensus 160 ~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~ 199 (247)
T PTZ00174 160 DLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND 199 (247)
T ss_pred HHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh
Confidence 554444333333333 467999999999999999999999
No 93
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.64 E-value=6.4e-15 Score=157.22 Aligned_cols=183 Identities=15% Similarity=0.121 Sum_probs=112.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--CceEEecCccEEeeCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~lgliaenG~~ir~~~~ 667 (780)
..++|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+.+.+..+. ..++|++||+.|+...+
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 468999999999998 556788999999999998 499999999999999999988764 24699999999987643
Q ss_pred Cc----eEecCCCcChhHHHHHHHHHHHHHhcCCCceeec--c--c---ceEEEee------ccCCCC---cccccHHHH
Q 003999 668 SE----WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI--K--E---SALVWHH------QDADPD---FGSCQAKEL 727 (780)
Q Consensus 668 ~~----w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~--k--~---~~l~~hy------r~ad~d---~~~~qa~el 727 (780)
.. +.......+ .+.+..+++...+. .+..+.. . . ......+ ...... +--...++.
T Consensus 82 ~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271)
T PRK03669 82 WQDHPDFPRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDER 157 (271)
T ss_pred ccCCCCceEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHH
Confidence 11 111111233 34455555544322 0111000 0 0 0000000 000000 000000112
Q ss_pred HHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCC---CCCcc-ccCC
Q 003999 728 LDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCV---RARAC-KLDD 780 (780)
Q Consensus 728 ~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i---~~~~~-~~~~ 780 (780)
...+.+.+....+.+..+..++||.|+|+|||.|+++|++++|+ +++++ -+||
T Consensus 158 ~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGD 214 (271)
T PRK03669 158 MAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGD 214 (271)
T ss_pred HHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcC
Confidence 22233333322466666667999999999999999999999999 77664 3444
No 94
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.62 E-value=6.3e-15 Score=153.00 Aligned_cols=167 Identities=11% Similarity=0.048 Sum_probs=107.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCC-CC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNK-TS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~-~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||+...+.+.+..++ ..++|++||++++... +.
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (230)
T PRK01158 3 IKAIAIDIDGTITD---KDRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGK 78 (230)
T ss_pred eeEEEEecCCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCC
Confidence 47999999999998 566799999999999998 599999999999999988877664 3469999999998753 22
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCc--eeecccc----eEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEE
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGS--NIEIKES----ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs--~iE~k~~----~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v 742 (780)
.+.. ...+ .+..+++...+..+.. .+..... .....+.. ....++...++.. ...+.+
T Consensus 79 ~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~--~~~~~~ 142 (230)
T PRK01158 79 RIFL--GDIE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEEL--GLDLEI 142 (230)
T ss_pred EEEE--cchH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc-------ccHHHHHHHHHHc--CCcEEE
Confidence 2221 1111 1223333222221111 1110000 00011111 0112233333321 123556
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 743 KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+..++||.|+|+|||.|++++++++++++++|.
T Consensus 143 ~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 143 VDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred EecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 66667899999999999999999999999987654
No 95
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.62 E-value=1e-14 Score=151.89 Aligned_cols=175 Identities=20% Similarity=0.196 Sum_probs=115.4
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCceEe
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSEWET 672 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~w~~ 672 (780)
||+|+||||++ .+..++++++++|++|.+. |+.++++|||++..+.+++..++ ..++|++||+++....+.....
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKELQEK-GIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHHHHT-TCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhhccc-ceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 6677999999999999995 99999999999999999999775 3589999999994443333221
Q ss_pred cCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEE------------------e-eccC----CCC-----cc--cc
Q 003999 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW------------------H-HQDA----DPD-----FG--SC 722 (780)
Q Consensus 673 ~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~------------------h-yr~a----d~d-----~~--~~ 722 (780)
...+ .+.+..+++...+..-..++...+..... . .... ..+ +. ..
T Consensus 77 --~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~ 151 (254)
T PF08282_consen 77 --KPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPE 151 (254)
T ss_dssp --ESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHH
T ss_pred --hhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccch
Confidence 1233 34455555554443211111111110000 0 0000 000 00 01
Q ss_pred cHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 723 QAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 723 qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+..++...|.+.+.+.-..+.++..++||.|+++|||.|+++|++.+|++.+++.
T Consensus 152 ~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~ 206 (254)
T PF08282_consen 152 DLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDII 206 (254)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEE
T ss_pred hhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeE
Confidence 2344555565555443234567899999999999999999999999999986653
No 96
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.61 E-value=6.4e-15 Score=145.27 Aligned_cols=143 Identities=26% Similarity=0.394 Sum_probs=112.3
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++.. .++..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 66654 776661 2222 2334444433321 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S 489 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~ 489 (780)
.|.++. .++.+++.++|+.||++|.||..||+|++++|||+|+ .|+|+|..+|..+.+ +
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g-------------------~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG-------------------CPVIASDIGGNNEIIND 133 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--------------------EEEEESSTHHHHHSGT
T ss_pred cccccc-cccccccccccccceeccccccccccccccccccccc-------------------cceeeccccCCceeecc
Confidence 366654 6678999999999999999999999999999999996 589999977777777 3
Q ss_pred --CcEEECCCCHHHHHHHHHHHHcCC
Q 003999 490 --GAIRVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.|++++|.|+++++++|.+++.++
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 379999999999999999999976
No 97
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.60 E-value=1.6e-14 Score=152.79 Aligned_cols=175 Identities=18% Similarity=0.198 Sum_probs=111.8
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC-ce
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS-EW 670 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~-~w 670 (780)
+|++|+||||++ .++.++++++++|++|.+. |+.|+|+|||++..+.+.+..++ ..++|+.||+.+...++. .+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 689999999999 5678999999999999995 99999999999999999888764 347999999999876432 23
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcC--------CCceeecccce-EEEe----eccC----CC-----C-ccc---ccH
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESA-LVWH----HQDA----DP-----D-FGS---CQA 724 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~~~-l~~h----yr~a----d~-----d-~~~---~qa 724 (780)
.. ..+ ++.+.++++.+.+.. .+.++...... +..+ +... +. + +.. ...
T Consensus 77 ~~---~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KK---PLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ec---CCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 32 233 344555665544321 11222111000 0000 0000 00 0 000 000
Q ss_pred HHHHHHHHHHhcC----CCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 725 KELLDHLESVLAN----EPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 725 ~el~~~L~~~l~~----~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
++..+.+...+.. ..+.+ .++..++||.|+|+|||.|++++++.+++++.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~ 208 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVI 208 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEE
Confidence 1112223332321 23554 56788999999999999999999999999986654
No 98
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.60 E-value=1.5e-14 Score=149.44 Aligned_cols=181 Identities=14% Similarity=0.084 Sum_probs=110.7
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-C-ceEEecCccEEeeCCCCc-
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-M-LGIAAEHGYFIRWNKTSE- 669 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~-lgliaenG~~ir~~~~~~- 669 (780)
+|++|+||||++ .++.+++.++++|++|.+ .|+.|+++|||+...+..++..+. . .++||+||+.|+......
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 689999999998 444456669999999988 599999999999999999998764 2 469999999998753221
Q ss_pred e---EecCCCcChhHHHHHHHHHHHHHhcCCCc-eeecc--------cceEEE------eeccCCCCcccccHHHHHHHH
Q 003999 670 W---ETNHLGADLEWKKIVEPVMRSYTEATDGS-NIEIK--------ESALVW------HHQDADPDFGSCQAKELLDHL 731 (780)
Q Consensus 670 w---~~~~~~~d~~wk~~v~~i~~~~~e~t~gs-~iE~k--------~~~l~~------hyr~ad~d~~~~qa~el~~~L 731 (780)
+ .......+ | +.+.++++...+...-. ..... ...+.. ..+....-+......+..+.+
T Consensus 77 ~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 11111222 2 33555555432210000 00000 000000 000000000000012223344
Q ss_pred HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc-ccCC
Q 003999 732 ESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC-KLDD 780 (780)
Q Consensus 732 ~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~-~~~~ 780 (780)
.+.+...++.+.++..++||.|++++||.|++++++++|+++.+| ..||
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD 203 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGD 203 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECC
Confidence 444444456666678899999999999999999999999999776 3443
No 99
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.58 E-value=3e-14 Score=151.66 Aligned_cols=177 Identities=15% Similarity=0.108 Sum_probs=111.3
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCC-CC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNK-TS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~-~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++|++ +|+.|+|+|||++..+.+.+..++ ..++|++||+.++... +.
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~ 78 (272)
T PRK10530 3 YRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKK 78 (272)
T ss_pred ccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCE
Confidence 58999999999998 667799999999999999 499999999999999999888764 3369999999999643 32
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceE------------EEe----------eccCCCCc-------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESAL------------VWH----------HQDADPDF------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l------------~~h----------yr~ad~d~------- 719 (780)
.+.. ...+ .+.+.++++...+..-...+...+..+ .|. +...+ ++
T Consensus 79 ~l~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (272)
T PRK10530 79 VLEA--DPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVD-SLAQAARQV 152 (272)
T ss_pred EEEe--cCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcc-cHHHHHhhc
Confidence 2221 1233 345556665544321111111100000 000 00000 00
Q ss_pred c------cc--cHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 G------SC--QAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ~------~~--qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+ .. ..+++....+.+....++.+ .++..++||.|+++|||.|++++++++|+++++|.
T Consensus 153 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i 219 (272)
T PRK10530 153 NAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVV 219 (272)
T ss_pred CCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeE
Confidence 0 00 00111112222223334443 35667899999999999999999999999986654
No 100
>PLN02423 phosphomannomutase
Probab=99.57 E-value=6.2e-14 Score=147.30 Aligned_cols=168 Identities=19% Similarity=0.147 Sum_probs=103.3
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC-C-C-ceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC-E-M-LGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l-~-~-lgliaenG~~ir~~~~ 667 (780)
++++++|+||||++ .+++++++++++|++|++ . +.|+|+|||+...+.+.|... . . .++|++||+++...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45666999999998 677899999999999996 3 999999999999998888763 2 1 3789999999985443
Q ss_pred CceEecC-CCcChhHHHHHHHHHHHHHh--------cCCCceeecccceEEEe--eccCCC----Cccc-----ccHHHH
Q 003999 668 SEWETNH-LGADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWH--HQDADP----DFGS-----CQAKEL 727 (780)
Q Consensus 668 ~~w~~~~-~~~d~~wk~~v~~i~~~~~e--------~t~gs~iE~k~~~l~~h--yr~ad~----d~~~-----~qa~el 727 (780)
....... ...+ .+.++++++...+ ...+.+++..+...... +.++.. ++.. ....++
T Consensus 82 ~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 158 (245)
T PLN02423 82 LIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKM 158 (245)
T ss_pred EEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHH
Confidence 2222111 1223 2334444443222 12344555333222111 122210 0000 111233
Q ss_pred HHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHH
Q 003999 728 LDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLS 766 (780)
Q Consensus 728 ~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll 766 (780)
...+.+.+.+..+. ..+|..++||.|+|+|||.|++.|+
T Consensus 159 ~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~ 198 (245)
T PLN02423 159 VSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE 198 (245)
T ss_pred HHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc
Confidence 34444444332343 3346789999999999999999999
No 101
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.56 E-value=6.7e-14 Score=144.05 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=105.2
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCC-ceEEecCccEEeeCCCCce
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~-lgliaenG~~ir~~~~~~w 670 (780)
|+|++|+||||++ .++.++++++++|++|++ +|+.|+|+|||++..+.+.+..++. .++|++||+++++.++..
T Consensus 2 k~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~- 76 (215)
T TIGR01487 2 KLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI- 76 (215)
T ss_pred cEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE-
Confidence 6999999999998 667899999999999998 5999999999999999998877753 369999999999865321
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEE
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVE 750 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vE 750 (780)
. ... ....|........ .+....-.. +.......+... .+ ..+++ ...+...++.+..+..++|
T Consensus 77 ~-~~~-~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~--~~-----~~~~~----~~~l~~~~~~~~~~~~~~e 140 (215)
T TIGR01487 77 F-LAN-MEEEWFLDEEKKK-RFPRDRLSN--EYPRASLVIMRE--GK-----DVDEV----REIIKERGLNLVDSGFAIH 140 (215)
T ss_pred E-Eec-ccchhhHHHhhhh-hhhhhhccc--ccceeEEEEecC--Cc-----cHHHH----HHHHHhCCeEEEecCceEE
Confidence 1 111 1111211000000 000000000 000011111110 01 11222 3233334566665667899
Q ss_pred EEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 751 VKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
|.|.+++||.+++++++.++++.++|.
T Consensus 141 i~~~~~~K~~~i~~l~~~~~i~~~~~i 167 (215)
T TIGR01487 141 IMKKGVDKGVGVEKLKELLGIKPEEVA 167 (215)
T ss_pred EecCCCChHHHHHHHHHHhCCCHHHEE
Confidence 999999999999999999999985543
No 102
>PLN02887 hydrolase family protein
Probab=99.56 E-value=8.1e-14 Score=161.42 Aligned_cols=179 Identities=16% Similarity=0.109 Sum_probs=112.1
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---Cc-------eEEec
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---ML-------GIAAE 657 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~l-------gliae 657 (780)
+-+.|+|++|+||||++ .+++++++++++|++|++. |+.|+|+|||++..+.+.+..+. .. ++|+.
T Consensus 305 ~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEALSR-GVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFL 380 (580)
T ss_pred ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEee
Confidence 34689999999999998 6778999999999999995 99999999999999998887653 12 35567
Q ss_pred CccEEeeCCCC-ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEE---------Ee--ec--c---C-CC--
Q 003999 658 HGYFIRWNKTS-EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV---------WH--HQ--D---A-DP-- 717 (780)
Q Consensus 658 nG~~ir~~~~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~---------~h--yr--~---a-d~-- 717 (780)
||++|+...+. .+.. ..+ ++.+.++++...+..-...+...+..+. ++ +. . . +.
T Consensus 381 NGA~I~d~~g~~I~~~---~L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 454 (580)
T PLN02887 381 QGLLVYGRQGREIYRS---NLD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQ 454 (580)
T ss_pred cCeEEEECCCcEEEEE---eCC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHH
Confidence 99999864333 2333 233 3455666655433211111111111000 00 00 0 0 00
Q ss_pred -----Cccc----ccHH----HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 718 -----DFGS----CQAK----ELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 718 -----d~~~----~qa~----el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+... ...+ ++...+.+.+.. .+.+ .++..++||.|+|+|||.|+++|++++||+.++|.
T Consensus 455 ~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~-~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eevi 527 (580)
T PLN02887 455 LLAAADIQKVIFLDTAEGVSSVLRPYWSEATGD-RANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIM 527 (580)
T ss_pred hhcccCeeEEEEEcChHHHHHHHHHHHHHHhcC-cEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEE
Confidence 0000 0011 122233332222 3553 46778999999999999999999999999987653
No 103
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.54 E-value=9.1e-14 Score=143.72 Aligned_cols=165 Identities=15% Similarity=0.113 Sum_probs=104.0
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCC--Cce
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT--SEW 670 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~--~~w 670 (780)
|++|+||||++ .++.++++++++|++|++ .|+.|+++|||++..+.+.+..++ ..++|++||++++..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 566799999999999998 599999999999999988887765 45799999999987653 234
Q ss_pred EecCCCcChhHHHHHHHHH-HHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEE
Q 003999 671 ETNHLGADLEWKKIVEPVM-RSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIV 749 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~-~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~v 749 (780)
... .+..|........ ..+..... .+ . .+..........++ +.+ ..+.+.+. ..+.+.++..++
T Consensus 77 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~-------~~~-~~~~~~~~-~~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAY---LEEEWFLDIVIAKTFPFSRLKV-QY-P-RRASLVKMRYGIDV-------DTV-REIIKELG-LNLVAVDSGFDI 141 (225)
T ss_pred ecc---cCHHHHHHHHHhcccchhhhcc-cc-c-cccceEEEeecCCH-------HHH-HHHHHhcC-ceEEEecCCcEE
Confidence 432 2333432211110 00000000 00 0 00011111111111 111 11111122 123334566799
Q ss_pred EEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 750 EVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
||.|+++|||.+++++++++++++++|.
T Consensus 142 ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 9999999999999999999999987663
No 104
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.52 E-value=2.4e-13 Score=143.88 Aligned_cols=173 Identities=14% Similarity=0.014 Sum_probs=109.5
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc--
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE-- 669 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~-- 669 (780)
+|++|+||||++ ..+...+.++++|++|.+. |+.|+++|||++..+.+++..++ ..++|++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l~~~-g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERLQEL-GIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 689999999998 4442344689999999984 99999999999999999998774 3579999999998765422
Q ss_pred ---eEecCCCcChhHHHHHHHHHHHHHhcCCCceee-ccc--------ceE-------EEeeccCCCCcccccHHHHHHH
Q 003999 670 ---WETNHLGADLEWKKIVEPVMRSYTEATDGSNIE-IKE--------SAL-------VWHHQDADPDFGSCQAKELLDH 730 (780)
Q Consensus 670 ---w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE-~k~--------~~l-------~~hyr~ad~d~~~~qa~el~~~ 730 (780)
|.. ....+ | +.+.++++.+.+..+..+.- ... ..+ ... .....-+ .. .++..+.
T Consensus 77 ~~~~~~-~~~i~--~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVI-ALGIP--Y-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REYSETI-LW-SEERRER 149 (256)
T ss_pred CCeEEE-EcCCC--H-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-CccCCce-ec-ChHHHHH
Confidence 221 11223 2 55666666543321111100 000 000 000 0000000 00 1223344
Q ss_pred HHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCC--CCcc
Q 003999 731 LESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVR--ARAC 776 (780)
Q Consensus 731 L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~--~~~~ 776 (780)
+...+...++.+..+..++||.|+++|||.|+++|+++++++ .+++
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~ 197 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYNQPGGAIKV 197 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHhhcCCCceE
Confidence 444444445666666679999999999999999999999998 6544
No 105
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.51 E-value=2e-12 Score=144.35 Aligned_cols=267 Identities=14% Similarity=0.103 Sum_probs=164.9
Q ss_pred cCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHH-hhhcCCEEEeecHHHHHHHHHHH
Q 003999 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDYARHFLSCC 273 (780)
Q Consensus 195 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~Dligf~t~~y~~~Fl~~~ 273 (780)
++.++.++|.+..-...+... .+..++++-+|-.|+..... -+....+.+ .+-.||+|...+....+++..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888876544443333 45677777776555432110 011111222 244689988777755433311
Q ss_pred HhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHH
Q 003999 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (780)
Q Consensus 274 ~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l 353 (780)
++ .++.++|+|+|.+.|......+.. ...+ ...++++|+++|++++.+++. +|
T Consensus 171 ------------------~~---~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------LN---PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------CC---CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 11 257789999999998753221110 0111 114678999999999966654 33
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcce
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 433 (780)
.+ +.+.+|+++ |+.||... ...+ ...+ . . ...|+++ |.++.+++.++|+.||+
T Consensus 224 ~~---la~~~p~~~----~vliG~~~--~~~~-------~~~~----~---~---~~nV~~~-G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 EA---LAKARPDWS----FVLIGPVD--VSID-------PSAL----L---R---LPNVHYL-GPKPYKELPAYLAGFDV 276 (373)
T ss_pred HH---HHHHCCCCE----EEEECCCc--CccC-------hhHh----c---c---CCCEEEe-CCCCHHHHHHHHHhCCE
Confidence 33 445688886 77777420 0011 0111 1 0 1237654 68999999999999999
Q ss_pred eeeccC-----CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHH
Q 003999 434 CIVNAV-----RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTL 508 (780)
Q Consensus 434 ~vvtS~-----rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~ 508 (780)
+++|+. +.++++..+||||||. |+|.|.+.++.+. .++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~-------------------PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK-------------------PVVATPLPEVRRY-EDEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC-------------------CEEecCcHHHHhh-cCcEEEeCCCHHHHHHHHHH
Confidence 999986 3578999999999974 7887765544332 23444556799999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 509 aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
+|..+..++..+. .+.+.+|||..=++.+++.|..
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 8876543333322 2268889988888888866553
No 106
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.51 E-value=1.8e-13 Score=142.98 Aligned_cols=167 Identities=16% Similarity=0.074 Sum_probs=109.0
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEEeeCCCCc
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~ir~~~~~~ 669 (780)
||++|+||||++ .++.+++.+ ++++ +.+ .|+.++|+|||++..+.+.+..++ ...+|++||+.|+....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~~~-~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~-- 72 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-GSG-DAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPE-- 72 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-hcC-CCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCC--
Confidence 689999999998 445566655 7777 555 599999999999999999998763 12489999999876432
Q ss_pred eEecCCCcChhHHHH------HHHHHHHHHhcCCCceeecccc--eEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeE
Q 003999 670 WETNHLGADLEWKKI------VEPVMRSYTEATDGSNIEIKES--ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (780)
Q Consensus 670 w~~~~~~~d~~wk~~------v~~i~~~~~e~t~gs~iE~k~~--~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~ 741 (780)
+. .+..|... ...+ ..+....+|..++.+.. ...++++.. ++.. ....++.+.+... ...+.
T Consensus 73 ~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~ 142 (236)
T TIGR02471 73 LQ-----PDRFWQKHIDHDWRRQAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAK 142 (236)
T ss_pred CC-----CChhHHHHHhcCCCHHHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEE
Confidence 11 01122111 1112 33334567766666542 355666643 3211 1122333333332 12344
Q ss_pred -EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 742 -VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 742 -v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+.++..++||.|+++|||.|+++|++++++++++|.
T Consensus 143 ~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i 179 (236)
T TIGR02471 143 VILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQIL 179 (236)
T ss_pred EEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 456778899999999999999999999999987654
No 107
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.48 E-value=8.7e-13 Score=152.32 Aligned_cols=186 Identities=11% Similarity=0.040 Sum_probs=116.6
Q ss_pred HHHHHHh---ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEec
Q 003999 582 IVSAYRK---TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAE 657 (780)
Q Consensus 582 i~~~y~~---a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliae 657 (780)
+++.|.. .++|+||+|+||||++ .++..+++++++|++|++. |+.|+++|||++..+..++..+. ..++|++
T Consensus 404 ~~~~~~~~~~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 404 ARPSRLPSSGQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred hhcccCCCcCceeeEEEEECcCCCcC---CCCccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 4444553 3578999999999999 4555677899999999985 99999999999999999888764 3479999
Q ss_pred CccEEeeCCCC------------ceEecCCCcChhHHHHHHHHHHHHHhcCC----------CceeecccceEEEe----
Q 003999 658 HGYFIRWNKTS------------EWETNHLGADLEWKKIVEPVMRSYTEATD----------GSNIEIKESALVWH---- 711 (780)
Q Consensus 658 nG~~ir~~~~~------------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~----------gs~iE~k~~~l~~h---- 711 (780)
||+.|+.+++. .+.-.....+ .+.+.++++...+... ..++..... ..+.
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d-~~~~ei~~ 555 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGD-MSVEDVSR 555 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCc-ccHHHHHH
Confidence 99999986530 1111111223 2334444444333110 111111100 0000
Q ss_pred ec--------cCC-CCcc---cc-cHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 712 HQ--------DAD-PDFG---SC-QAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 712 yr--------~ad-~d~~---~~-qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
+. .+. .++. .+ ...+.++.+.+.+...++.+..|..++||. +++|||.|+++|++.++++..++
T Consensus 556 ~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eV 632 (694)
T PRK14502 556 LTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELFRLNFGNI 632 (694)
T ss_pred hhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHhCCCccce
Confidence 00 000 0000 00 112334555555555567777799999999 59999999999999999986543
No 108
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.48 E-value=2e-13 Score=143.78 Aligned_cols=221 Identities=18% Similarity=0.165 Sum_probs=158.4
Q ss_pred CCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEE
Q 003999 221 NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300 (780)
Q Consensus 221 ~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~ 300 (780)
...++.|+=|+-|--.++-.. +--.++-|. |....|.+++++.++.+. .+.-.-...+|.
T Consensus 113 MGlktVfTdHSlfGfad~~si-----------~~n~ll~~s--------L~~id~~IcVshtskent-vlr~~L~p~kvs 172 (426)
T KOG1111|consen 113 MGLKTVFTDHSLFGFADIGSI-----------LTNKLLPLS--------LANIDRIICVSHTSKENT-VLRGALAPAKVS 172 (426)
T ss_pred cCceEEEeccccccccchhhh-----------hhcceeeee--------ecCCCcEEEEeecCCCce-EEEeccCHhHee
Confidence 468999999986642222111 111122211 334456667777776653 222222345789
Q ss_pred EeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC
Q 003999 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 301 i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (780)
++|+.++...|.+.... +. .+...|+.++||-+.||+++++..+.++.++||+.+ ++.+|
T Consensus 173 vIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fii~G--- 233 (426)
T KOG1111|consen 173 VIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FIIIG--- 233 (426)
T ss_pred eccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EEEec---
Confidence 99999999999874321 22 355889999999999999999999999999999988 88665
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
+||..-.+++.+++. +- ..+|+++ |.++++++-..|..-|||+.||+.|.|+++..||+.||.
T Consensus 234 --DGPk~i~lee~lEk~----~l------~~rV~~l-G~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL---- 296 (426)
T KOG1111|consen 234 --DGPKRIDLEEMLEKL----FL------QDRVVML-GTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGL---- 296 (426)
T ss_pred --CCcccchHHHHHHHh----hc------cCceEEe-cccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCC----
Confidence 566443444333333 11 1367754 689999999999999999999999999999999999973
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCCCc-EEECCCCHHHHHHHHHHHHcC
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSGA-IRVNPWDIDAVADAMTLAINM 512 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-l~VnP~d~~~~A~ai~~aL~m 512 (780)
++|.+..+|..+.|... +..-+-.++++++++.+|++.
T Consensus 297 ---------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 297 ---------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred ---------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 77888888888888543 445666889999998888864
No 109
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.46 E-value=1.7e-12 Score=138.73 Aligned_cols=178 Identities=15% Similarity=0.069 Sum_probs=112.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC-
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS- 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~- 668 (780)
.|+|++|+||||++ .+..++++++++|++|.+ .|+.|+|+|||+...+...+..+. ..++|++||++|+..++.
T Consensus 4 ~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~ 79 (273)
T PRK00192 4 KLLVFTDLDGTLLD---HHTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYF 79 (273)
T ss_pred ceEEEEcCcccCcC---CCCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccccc
Confidence 57999999999998 455677889999999998 499999999999999999888764 236999999999865331
Q ss_pred ------------ceEecCCCcChhHHHHHHHHHHHHHhcCCCce-eecc----c----ceEEE---e-eccCCC--Cccc
Q 003999 669 ------------EWETNHLGADLEWKKIVEPVMRSYTEATDGSN-IEIK----E----SALVW---H-HQDADP--DFGS 721 (780)
Q Consensus 669 ------------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~-iE~k----~----~~l~~---h-yr~ad~--d~~~ 721 (780)
.|... ...+ ++.+.++++.+.......+ .... + ..+.. . .+.... -+..
T Consensus 80 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T PRK00192 80 PFQPDGERLKGDYWVIE-LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLW 155 (273)
T ss_pred ccCCccccccCCceEEE-cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceee
Confidence 23211 1122 2445555543322111000 0000 0 00000 0 000000 0000
Q ss_pred ccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCC-Cccc
Q 003999 722 CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRA-RACK 777 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~-~~~~ 777 (780)
....+..+.+...+...++.+.+++.++||.|.+ +||.|+++|++.+++++ .+|.
T Consensus 156 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~ 211 (273)
T PRK00192 156 NGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETI 211 (273)
T ss_pred cCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEE
Confidence 0012334444544544567777778899999999 99999999999999998 7664
No 110
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.45 E-value=1.6e-12 Score=136.61 Aligned_cols=164 Identities=12% Similarity=0.050 Sum_probs=108.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+||+|+||||++ .+...++.++++|++|++. |+.|+++|||++..+..++..+. ..++|++||+.|..+.+
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 37999999999999 4556778899999999995 99999999999999999888764 33799999999997643
Q ss_pred eEec-C-----CCcChhH-------HHHHHHHHHHHHhcCCCce------------------ee------cccceEEEee
Q 003999 670 WETN-H-----LGADLEW-------KKIVEPVMRSYTEATDGSN------------------IE------IKESALVWHH 712 (780)
Q Consensus 670 w~~~-~-----~~~d~~w-------k~~v~~i~~~~~e~t~gs~------------------iE------~k~~~l~~hy 712 (780)
|... . ...+..| ...++.+++...+.....+ .+ .++.+-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 2200 0 0001111 2334444443332211111 01 1122222222
Q ss_pred ccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHHcCC
Q 003999 713 QDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP------------------Q---VLRPSSISVSLSLSVCV 771 (780)
Q Consensus 713 r~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p------------------~---gvsKG~al~~Ll~~l~i 771 (780)
...+ ..+ .+.++..++.++.|..|+.+.. . +.+||.|+++|.+.+.-
T Consensus 155 ~~~~--------~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGDP--------ARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCCH--------HHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 2211 112 4455667889999999998887 5 89999999999999876
Q ss_pred C
Q 003999 772 R 772 (780)
Q Consensus 772 ~ 772 (780)
.
T Consensus 223 ~ 223 (302)
T PRK12702 223 H 223 (302)
T ss_pred c
Confidence 4
No 111
>PLN02382 probable sucrose-phosphatase
Probab=99.41 E-value=2.4e-12 Score=144.81 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=108.3
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHH-HHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEE
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVL-KTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFI 662 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~i 662 (780)
..+.+.+|++|+||||++.. .++..+...+..| +++.+ .|+.++++|||+...+.++.+.++ ...+|+.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34567899999999999842 1346665555555 88887 599999999999877777655432 223778899999
Q ss_pred eeCCC----CceEecCCCcChhHHH-HHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC
Q 003999 663 RWNKT----SEWETNHLGADLEWKK-IVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN 737 (780)
Q Consensus 663 r~~~~----~~w~~~~~~~d~~wk~-~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~ 737 (780)
...+. ..|... .+..|.. .+...+..|.........+.+...+.+.+.+. .+.++...+.+.+..
T Consensus 83 ~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~ 152 (413)
T PLN02382 83 AYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEK 152 (413)
T ss_pred EeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHh
Confidence 87542 112211 1122322 12222222211111222233334444544321 123344555554543
Q ss_pred C--CeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHc---CCCCCcc
Q 003999 738 E--PAV-VKRGQHIVEVKPQVLRPSSISVSLSLSV---CVRARAC 776 (780)
Q Consensus 738 ~--~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l---~i~~~~~ 776 (780)
. .+. +.++..++||.|+++|||.|+++|++++ |+++.+|
T Consensus 153 ~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ 197 (413)
T PLN02382 153 RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNT 197 (413)
T ss_pred cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcE
Confidence 2 344 3578899999999999999999999999 8988654
No 112
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.41 E-value=6.9e-11 Score=132.45 Aligned_cols=190 Identities=12% Similarity=0.120 Sum_probs=123.0
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCChHHHHHHHHHHHHh----CCCCCCce
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ----HPGMRGKV 370 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~----~P~~~~~v 370 (780)
+|.+++++|+.+.+... + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 56667888886533221 1 123466777 4689999999999999999999999876521 34433
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea 450 (780)
++.+++ +++ ++++++++... + ..|.+ .|.+ +++..+|++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~-~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPVKV-RGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCeEE-Eecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 22333333210 1 13554 4555 47999999999999866 37899999
Q ss_pred hhcccCCCccccccccCCCCCCCceEEEcCCC-----CccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003999 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-----GCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKH 524 (780)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 524 (780)
|||+ .|+|++... |-.+.+ .++.-+.+.|+++++++|.+++.+.++.++.+.+..
T Consensus 299 ma~g-------------------~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIRG-------------------LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHcC-------------------CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9997 488888752 323334 333333458999999999999997444555555667
Q ss_pred hhHhhhCCHHHHHHHHH
Q 003999 525 YRYVSTHDVAYWARSFA 541 (780)
Q Consensus 525 ~~~V~~~~~~~Wa~~~l 541 (780)
+++...+....-++.++
T Consensus 360 ~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 360 LKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHhcCCchHHHHHHHHH
Confidence 77777776655555443
No 113
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.39 E-value=6.7e-12 Score=130.21 Aligned_cols=179 Identities=15% Similarity=0.084 Sum_probs=104.7
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC---
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS--- 668 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~--- 668 (780)
+|++|+||||++ .+. .+++++++|++|++. |+.|+++|||++..+..++..+. ..++|++||++|..+.+.
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l~~~-G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEELKDL-GFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 689999999998 223 455799999999995 99999999999999999887764 347999999999986421
Q ss_pred ---------ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeec---c----cceEEEeeccC--CCCccc---ccHHHH
Q 003999 669 ---------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI---K----ESALVWHHQDA--DPDFGS---CQAKEL 727 (780)
Q Consensus 669 ---------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~---k----~~~l~~hyr~a--d~d~~~---~qa~el 727 (780)
...-.....+ ++.++++++...+..+-.+... . -..+.....+. +.++.. ...++.
T Consensus 76 ~~~~~~~~~~~~i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~e~ 152 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSREG 152 (225)
T ss_pred cccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCHHH
Confidence 1111111233 2344555544433111000000 0 00000000000 000000 001122
Q ss_pred HHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCC--CCc-cccCC
Q 003999 728 LDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVR--ARA-CKLDD 780 (780)
Q Consensus 728 ~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~--~~~-~~~~~ 780 (780)
...+.+.+....+.+.++..++++. .++|||.|++.|++.+++. +.+ +.+||
T Consensus 153 ~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~~~~~~~i~~GD 207 (225)
T TIGR02461 153 WEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLRPGAIESVGLGD 207 (225)
T ss_pred HHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccccCcccEEEEcC
Confidence 2233333334457777788888875 5999999999999999884 433 55555
No 114
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.36 E-value=7.3e-13 Score=139.32 Aligned_cols=173 Identities=16% Similarity=0.194 Sum_probs=102.8
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--C-CceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--E-MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~-~lgliaenG~~ir~~~~ 667 (780)
++||++|+||||++ .+..-.+++.+.++ ....+++.++++|||+.+...+.+... | ...+|+.+|+.|++..
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 57999999999993 11122345555555 223468999999999999999888753 1 2469999999999843
Q ss_pred CceEecC---CCcChhHHH-HHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCe--E
Q 003999 668 SEWETNH---LGADLEWKK-IVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA--V 741 (780)
Q Consensus 668 ~~w~~~~---~~~d~~wk~-~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v--~ 741 (780)
.|.... ...+..|.. .++++++.+.+-.+....+.....+++.+...+. ...++.|+..+...++ .
T Consensus 77 -~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~~l~~~ 148 (247)
T PF05116_consen 77 -NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQRGLRVN 148 (247)
T ss_dssp -TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCCTCEEE
T ss_pred -CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHcCCCee
Confidence 333210 011223433 3444444333222222122233455555554321 2334566666655554 4
Q ss_pred E-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 742 V-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 742 v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
+ .++..+++|.|+++|||.|+++|+++++++...+
T Consensus 149 ~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~v 184 (247)
T PF05116_consen 149 VIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQV 184 (247)
T ss_dssp EEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGE
T ss_pred EEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHE
Confidence 3 4688999999999999999999999999987554
No 115
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.25 E-value=2e-09 Score=120.37 Aligned_cols=271 Identities=10% Similarity=0.053 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeec
Q 003999 183 ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHT 262 (780)
Q Consensus 183 vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t 262 (780)
.+..-..++++..+| |+|+.| +....++.+.+....++|+....+-..+. ..-+ .-.+|.+...+
T Consensus 91 ~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~---------~~~~---~~~ad~i~~~s 155 (380)
T PRK13609 91 FGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLH---------KIWV---HREVDRYFVAT 155 (380)
T ss_pred HHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCC---------cccc---cCCCCEEEECC
Confidence 333334566666777 888885 66666777666655567765333211111 0011 11588888777
Q ss_pred HHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCch-hhhhhcCCchhHHHHHHHHHHc---CCCe-EE
Q 003999 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMG-RLESVLNLPATATKIKEIEKQF---DGKK-LI 337 (780)
Q Consensus 263 ~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~-~~~~~~~~~~~~~~~~~lr~~~---~~~~-vi 337 (780)
....+.+.+ .|+. ..+|.++ |++.. .|.... + ...+++++ ++++ ++
T Consensus 156 ~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il 206 (380)
T PRK13609 156 DHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILL 206 (380)
T ss_pred HHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEE
Confidence 654444432 1321 1123333 44332 232211 1 12345665 2444 55
Q ss_pred EEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecC
Q 003999 338 LGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417 (780)
Q Consensus 338 l~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~ 417 (780)
+..|++...||+...++++.+ .|+++ ++.+++. +++ ++++++++++.. + ..|+++ +
T Consensus 207 ~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~~----~~~~l~~~~~~~----~----~~v~~~-g 262 (380)
T PRK13609 207 IMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NEA----LKQSLEDLQETN----P----DALKVF-G 262 (380)
T ss_pred EEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CHH----HHHHHHHHHhcC----C----CcEEEE-e
Confidence 667889889999988887642 36554 6666531 122 234444444332 2 236665 5
Q ss_pred CCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC-CCCcc----ccC-CCc
Q 003999 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCS----PSL-SGA 491 (780)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~a 491 (780)
.+ +++..+|+.||++|. ++.|++..|||+||. |+|++. ..|.. ..+ ..|
T Consensus 263 ~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-------------------PvI~~~~~~g~~~~n~~~~~~~G 317 (380)
T PRK13609 263 YV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV-------------------PVILYKPVPGQEKENAMYFERKG 317 (380)
T ss_pred ch--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-------------------CEEECCCCCCcchHHHHHHHhCC
Confidence 55 468899999999874 455899999999974 777765 33421 122 234
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
..+.+.|.++++++|.+++++++ .+..+.+..+++...+++...++.+++.+...
T Consensus 318 ~~~~~~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 318 AAVVIRDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred cEEEECCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 44556799999999999998754 34444455666777788888888877665543
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.24 E-value=5.4e-10 Score=125.25 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=139.2
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCC-ceEEEEEEcC-CCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRG-KVVLVQIVNP-ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~-~vvLvqi~~p-~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
..+...+.|+.+-||+.+.|.||..+...-|+..- ...++..+++ ..+...+..++.+++.+++++.+. +| .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----c
Confidence 67889999999999999999999999887755111 2334444433 223334445566777888876532 23 2
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C-
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S- 489 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~- 489 (780)
++++....++.+...+++.+.+..+++..|-||+|++|||+|+ .|+|++..+|..+.+ +
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g-------------------lPvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG-------------------LPVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC-------------------CCEEEecCCCceEEEEcC
Confidence 5556567788888888888888888888899999999999997 489999999999988 3
Q ss_pred -CcEEECCCCHH---HHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHHHHH
Q 003999 490 -GAIRVNPWDID---AVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACR 549 (780)
Q Consensus 490 -~al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~~~~ 549 (780)
.|++++| +.+ .+|++|.++.+.|.. +.+..+.+++.|.+ +++ +.|.+.+.....
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSW----QHYSERIASVLG 466 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhH----HHHHHHHHHHhH
Confidence 5999999 776 599999999998864 66666779999988 655 555555555433
No 117
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.24 E-value=3.6e-10 Score=120.16 Aligned_cols=197 Identities=20% Similarity=0.275 Sum_probs=140.4
Q ss_pred EEEEeecCCCchhhhhh-cCCchhHHHHHHHHHHcCC--CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 298 YIKILPVGVHMGRLESV-LNLPATATKIKEIEKQFDG--KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~-~~~~~~~~~~~~lr~~~~~--~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
.+.+.|+|++...+... .. ...+ +.++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56788999999887642 00 0112 47999999999999999999999999877666 33666
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|... +. ...+..++...+.. ..|.+ .+.++.+++..+|+.||++++||..||||++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 65322 11 12223344333221 12554 677888889999999999999999999999999999996
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC-C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G--AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-ST 530 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~ 530 (780)
.|+|+|...|..+.+. + |+++++.|++++++++..+++++ +.++...+..++.+ ..
T Consensus 301 -------------------~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 301 -------------------TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEE 360 (381)
T ss_pred -------------------CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh
Confidence 4889999998888884 3 77888888999999999999987 23333333234444 46
Q ss_pred CCHHHHHHHHHHHHHH
Q 003999 531 HDVAYWARSFAQDLER 546 (780)
Q Consensus 531 ~~~~~Wa~~~l~~l~~ 546 (780)
+++..-++.+..-+..
T Consensus 361 ~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 361 FSWERIAEQLLELYEE 376 (381)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 7766666555554444
No 118
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.22 E-value=2.4e-10 Score=115.95 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=81.6
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCC
Q 003999 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP 418 (780)
Q Consensus 339 ~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~ 418 (780)
++||+.+.||+...++|+..+.+++|+++ |+.+|... +....+ .+... .+. ...|.++. .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~----~~~~~----~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLE----ELLAA----LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHH----HHHHh----cCC--cccEEEeC-C
Confidence 89999999999999999999988888765 88777422 111111 11111 111 12476665 4
Q ss_pred C-CHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 419 V-PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 419 v-~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
+ +.+++..+++.||+++.||..||+++..+|||+|+ .|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g-------------------~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG-------------------LPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC-------------------CCEEEcCCCCcceEE
Confidence 4 55666777777999999999999999999999996 489999998877655
No 119
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.21 E-value=8.6e-10 Score=122.09 Aligned_cols=257 Identities=14% Similarity=0.074 Sum_probs=156.7
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~ 268 (780)
.++++..+| |+|+.|+....+... +..+..+.|+.++.|..+|.. .+.++ .-.+|.+...+.+-
T Consensus 84 ~~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~--- 147 (357)
T PRK00726 84 RKILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA--- 147 (357)
T ss_pred HHHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---
Confidence 344555566 999999865544444 444556788887766555421 01111 11345544333210
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccccccC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFK 347 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld~~K 347 (780)
+. . ....++.++|+|+|.+.+.+. .. ..++ .. ++.++|+.+++....|
T Consensus 148 ~~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~ 196 (357)
T PRK00726 148 FP--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGAR 196 (357)
T ss_pred hh--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHH
Confidence 00 0 112468899999998765421 10 0111 12 3678889999999999
Q ss_pred ChHHHH-HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 348 GISLKL-LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 348 Gi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
++...+ +|++++.+ .| .+++++|. ++. +++.+++ + .+. . |.+. +.+ ++...
T Consensus 197 ~~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~~-~~~~~~~----~-----~~~---~-v~~~-g~~--~~~~~ 248 (357)
T PRK00726 197 VLNEAVPEALALLPE-AL-----QVIHQTGK-----GDL-EEVRAAY----A-----AGI---N-AEVV-PFI--DDMAA 248 (357)
T ss_pred HHHHHHHHHHHHhhh-Cc-----EEEEEcCC-----CcH-HHHHHHh----h-----cCC---c-EEEe-ehH--hhHHH
Confidence 987776 88887743 22 33555552 221 2222221 1 121 2 4443 444 68999
Q ss_pred HHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc--------cccC---CCcEEEC
Q 003999 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--------SPSL---SGAIRVN 495 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~al~Vn 495 (780)
+|+.||+++.+| | +.+.+|||+||. |+|++-..|. ++.+ ..|++++
T Consensus 249 ~~~~~d~~i~~~---g-~~~~~Ea~~~g~-------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~ 305 (357)
T PRK00726 249 AYAAADLVICRA---G-ASTVAELAAAGL-------------------PAILVPLPHAADDHQTANARALVDAGAALLIP 305 (357)
T ss_pred HHHhCCEEEECC---C-HHHHHHHHHhCC-------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEE
Confidence 999999999877 3 588999999974 6666544221 2334 2378898
Q ss_pred CCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 496 PWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 496 P~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
|.| +++++++|.+++++++ .++...+..+++..+.+...-++.+++.+
T Consensus 306 ~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 306 QSDLTPEKLAEKLLELLSDPE-RLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 888 9999999999999753 45555556777787788777777766544
No 120
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.17 E-value=3.7e-09 Score=116.31 Aligned_cols=246 Identities=16% Similarity=0.145 Sum_probs=146.6
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~ 268 (780)
.++++..+| |+|+.|..... ++..+..+..++|+.++-|..||. .. +.++ ...+|.|...+....+.
T Consensus 82 ~~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~ 148 (350)
T cd03785 82 RKILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY 148 (350)
T ss_pred HHHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc
Confidence 345555666 89999876543 333444445577887665555542 10 1111 11267776655532211
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
+ ...++.++|+|+|.+.+... + . ++++ +++++++.+++...
T Consensus 149 -----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~~ 192 (350)
T cd03785 149 -----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQG 192 (350)
T ss_pred -----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcHh
Confidence 0 12356788999998766431 0 0 3333 46778888888777
Q ss_pred cCChHHHH-HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHH
Q 003999 346 FKGISLKL-LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 346 ~KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
.||...++ .|++.+. + ++ +.++.+++ .+ +.+++++ .+++. + ..|+++ +.+ +++
T Consensus 193 ~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~----~~~~~----~----~~v~~~-g~~--~~~ 246 (350)
T cd03785 193 ARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKK----AYEEL----G----VNYEVF-PFI--DDM 246 (350)
T ss_pred HHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHH----HHhcc----C----CCeEEe-ehh--hhH
Confidence 88876655 7777663 2 32 33333332 22 2233333 33221 1 125544 343 789
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----c----cccC---CCcEE
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----C----SPSL---SGAIR 493 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~al~ 493 (780)
..+|+.||++|.+| | +.+++|||+||. |+|++...| + ++.+ ..|++
T Consensus 247 ~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~ 303 (350)
T cd03785 247 AAAYAAADLVISRA---G-ASTVAELAALGL-------------------PAILIPLPYAADDHQTANARALVKAGAAVL 303 (350)
T ss_pred HHHHHhcCEEEECC---C-HhHHHHHHHhCC-------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEEE
Confidence 99999999999876 3 578999999974 667664433 1 2334 23889
Q ss_pred ECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCH
Q 003999 494 VNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (780)
Q Consensus 494 VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 533 (780)
++|. |.++++++|.+++..+ +.++...++.++++..+..
T Consensus 304 v~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 304 IPQEELTPERLAAALLELLSDP-ERLKAMAEAARSLARPDAA 344 (350)
T ss_pred EecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCHH
Confidence 9987 8999999999999754 3445445556777665543
No 121
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.17 E-value=3.4e-09 Score=117.88 Aligned_cols=251 Identities=16% Similarity=0.142 Sum_probs=147.8
Q ss_pred HHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecH
Q 003999 186 IFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTF 263 (780)
Q Consensus 186 ~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~ 263 (780)
.|++ +.+..+| |+|++|......+...+-.+..++|+++.-+-. -+.+.+. |+.+++.+-+. .||++--.+.
T Consensus 77 ~l~~-~l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 77 GLEE-LLLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTE 150 (365)
T ss_pred HHHH-HHHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCH
Confidence 4443 3445566 999999644444433333334578887542211 1111111 22333333322 2677777777
Q ss_pred HHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcC-CCeEEEE-ec
Q 003999 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD-GKKLILG-ID 341 (780)
Q Consensus 264 ~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~vil~-Vd 341 (780)
...+++++ +|.+ ..+|.++++|+....+..... .....+++++. ++.+++. ..
T Consensus 151 ~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~h 205 (365)
T TIGR00236 151 QAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTLH 205 (365)
T ss_pred HHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEecC
Confidence 77777653 2321 336788898863222221110 01234555563 3344454 44
Q ss_pred ccc-ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC
Q 003999 342 DMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (780)
Q Consensus 342 rld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~ 420 (780)
|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|+++ ++++
T Consensus 206 r~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~~~ 264 (365)
T TIGR00236 206 RRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EPLE 264 (365)
T ss_pred chhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CCCC
Confidence 543 45999999999999988888875 55554332 11 1111 222221 1 1246655 5788
Q ss_pred HHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC-CC-cEEECCC
Q 003999 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVNPW 497 (780)
Q Consensus 421 ~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP~ 497 (780)
..++..+|+.||+++.+| |.+..|||+|+. |+|.+ ..+|..+.+ .+ ++++ |.
T Consensus 265 ~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-------------------PvI~~~~~~~~~e~~~~g~~~lv-~~ 319 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-------------------PVLVLRDTTERPETVEAGTNKLV-GT 319 (365)
T ss_pred hHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-------------------CEEECCCCCCChHHHhcCceEEe-CC
Confidence 899999999999999888 456799999974 67775 555555444 33 5566 57
Q ss_pred CHHHHHHHHHHHHcCC
Q 003999 498 DIDAVADAMTLAINMR 513 (780)
Q Consensus 498 d~~~~A~ai~~aL~m~ 513 (780)
|+++++++|.++++.+
T Consensus 320 d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 320 DKENITKAAKRLLTDP 335 (365)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 9999999999999865
No 122
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.12 E-value=3.9e-09 Score=116.01 Aligned_cols=180 Identities=13% Similarity=0.100 Sum_probs=113.9
Q ss_pred EEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccccccCChHHHH-HHHHHHHHhCCCCCCceEEEEEEc
Q 003999 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKL-LAMEQLLQQHPGMRGKVVLVQIVN 377 (780)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld~~KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~ 377 (780)
.++|+|+|...+... .. ..++ .+ +++++|++++|....|++...+ .|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987654321 00 1111 12 4678899999988889876644 788776542 332 333442
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCC
Q 003999 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (780)
Q Consensus 378 p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~ 457 (780)
+++. + ++++.+++.+ ...++.+. ..++..+|+.||++|.+| | +.+.+|||+|+.
T Consensus 218 ----~~~~-~----~l~~~~~~~~-------l~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KNDL-E----KVKNVYQELG-------IEAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cchH-H----HHHHHHhhCC-------ceEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 2221 2 3333333322 11233332 227899999999999865 4 689999999974
Q ss_pred CccccccccCCCCCCCceEEEcCCCCcc-------ccC---CCcEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 003999 458 PIMDEALGRERDSPHTSMLVVSEFIGCS-------PSL---SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHY 525 (780)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (780)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++.+ +.++.+.+..+
T Consensus 272 -----------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~ 333 (348)
T TIGR01133 272 -----------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP-ANLEAMAEAAR 333 (348)
T ss_pred -----------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH-HHHHHHHHHHH
Confidence 77777665422 234 2488999876 999999999999764 34555566678
Q ss_pred hHhhhCCHHHHHH
Q 003999 526 RYVSTHDVAYWAR 538 (780)
Q Consensus 526 ~~V~~~~~~~Wa~ 538 (780)
+++..+...++++
T Consensus 334 ~~~~~~~~~~i~~ 346 (348)
T TIGR01133 334 KLAKPDAAKRIAE 346 (348)
T ss_pred hcCCccHHHHHHh
Confidence 8887776666554
No 123
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.10 E-value=7.3e-09 Score=114.64 Aligned_cols=250 Identities=15% Similarity=0.015 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeC--CCCChhHhhcCCChHHHHHh--hhcCCEEE
Q 003999 184 NKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS--PFPSSEIYRTLPVRDEILRG--LLNCDLIG 259 (780)
Q Consensus 184 N~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~~~~lp~r~eil~~--ll~~Dlig 259 (780)
...+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|- .|- +..|+. ..+. .-.+|.+-
T Consensus 77 ~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~--~~r~~~~~~ad~~~ 146 (363)
T cd03786 77 LIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDE--ENRHAIDKLSDLHF 146 (363)
T ss_pred HHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCch--HHHHHHHHHhhhcc
Confidence 33444444443 67 89999987766665555555557888865542 110 001211 1111 11356655
Q ss_pred eecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCC-CchhhhhhcCCchhHHHHHHHHHHc--C-CCe
Q 003999 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQF--D-GKK 335 (780)
Q Consensus 260 f~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~--~-~~~ 335 (780)
..+....+++.+ .|. ...+|.++++++ |...+..... + ....++.+ + ++.
T Consensus 147 ~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~~ 200 (363)
T cd03786 147 APTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKKY 200 (363)
T ss_pred CCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCCE
Confidence 555544444432 122 234577777774 5433321110 0 01112223 2 345
Q ss_pred EEEEeccccc---cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 336 LILGIDDMDI---FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 336 vil~Vdrld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
+++.++|+.. .||+..+++|++++.+. + +.++..+. ++... ++++.+.+.+.. . ..|
T Consensus 201 vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~~----~l~~~~~~~~~~--~---~~v 260 (363)
T cd03786 201 ILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTRP----RIREAGLEFLGH--H---PNV 260 (363)
T ss_pred EEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChHH----HHHHHHHhhccC--C---CCE
Confidence 7778999875 79999999999987542 2 33543332 12222 333344333210 0 136
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCc
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGA 491 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~a 491 (780)
.++ +....+++..+|+.||++|.+|- | +..|+++|+. |+|++...+..+++ ..|
T Consensus 261 ~~~-~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-------------------PvI~~~~~~~~~~~~~~g 315 (363)
T cd03786 261 LLI-SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-------------------PVLNLRDRTERPETVESG 315 (363)
T ss_pred EEE-CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-------------------CEEeeCCCCccchhhhee
Confidence 544 45677899999999999999984 4 4689999964 67777655544444 444
Q ss_pred EEECC-CCHHHHHHHHHHHHcCCH
Q 003999 492 IRVNP-WDIDAVADAMTLAINMRD 514 (780)
Q Consensus 492 l~VnP-~d~~~~A~ai~~aL~m~~ 514 (780)
+-+.+ .|+++++++|.++++.+.
T Consensus 316 ~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 316 TNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred eEEecCCCHHHHHHHHHHHhcCch
Confidence 43333 479999999999998764
No 124
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.10 E-value=1.1e-08 Score=114.94 Aligned_cols=271 Identities=10% Similarity=0.077 Sum_probs=154.3
Q ss_pred HHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHH
Q 003999 188 ADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267 (780)
Q Consensus 188 A~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~ 267 (780)
..++++..+| |+|.++ +....+..+.+++..++|+.. .++-+-.... | + --.+|.+-..+....+
T Consensus 96 l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w----~--~~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 96 LINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W----I--TPYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c----c--cCCCCEEEECCHHHHH
Confidence 3445556677 888875 222233333333344677743 3443311000 1 1 1247887777765444
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCC-eEEEEeccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGK-KLILGIDDM 343 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~-~vil~Vdrl 343 (780)
.+.+ .|+. ..+|.+.++.|+. .|.... + ..++++++ +++ .+++.+|++
T Consensus 161 ~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~l 212 (391)
T PRK13608 161 DFID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAF 212 (391)
T ss_pred HHHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCc
Confidence 4432 1221 1234444555553 333211 1 12344555 244 456779999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
...||+..+++++ ++..|+++ ++.+++ .++ ++.+++.+. .+. . ..|+++ |.+ ++
T Consensus 213 g~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v~~~-G~~--~~ 266 (391)
T PRK13608 213 GVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENVLIL-GYT--KH 266 (391)
T ss_pred ccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCeEEE-ecc--ch
Confidence 9999999999885 34456654 655552 222 122223222 221 1 135544 454 57
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC------CCcEEECCC
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL------SGAIRVNPW 497 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~al~VnP~ 497 (780)
+..+|+.||++|.. +.|++..|||+||. |+|++...+..+.. ..|.-+-+.
T Consensus 267 ~~~~~~~aDl~I~k----~gg~tl~EA~a~G~-------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~~ 323 (391)
T PRK13608 267 MNEWMASSQLMITK----PGGITISEGLARCI-------------------PMIFLNPAPGQELENALYFEEKGFGKIAD 323 (391)
T ss_pred HHHHHHhhhEEEeC----CchHHHHHHHHhCC-------------------CEEECCCCCCcchhHHHHHHhCCcEEEeC
Confidence 99999999999863 45889999999974 77776433222211 222223356
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHhh
Q 003999 498 DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
|.++++++|.+++++++ .+..+.++.+++...++...-++.+++.+...++.+
T Consensus 324 ~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNE-QLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999998653 455555667777778888888888887776655543
No 125
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.07 E-value=4.7e-08 Score=114.69 Aligned_cols=182 Identities=12% Similarity=0.078 Sum_probs=120.9
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
++..++..|.|+...||..+.+.+++++++ .+|+. .+.+|..|.....+. .-.++.+.+.+++++ ..|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C-
Confidence 356688899999999999999999999985 56652 366776665432221 113445555665542 0122 1
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeee-ccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIV-NAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vv-tS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (780)
.|+++.+ .+..--..+|+.||+++. ||. .|..|+.-+-||.- |.|..|-.-|...+
T Consensus 459 -kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E 516 (601)
T TIGR02094 459 -RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGE 516 (601)
T ss_pred -CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCcccc
Confidence 4777663 455555678999999999 777 89999998888873 45666666666544
Q ss_pred C---CCcEEECC------------CCHHHHHHHHHHHH-----cCCH----HHHHHHHHH-HhhHhhhCCHHHHHHHHHH
Q 003999 488 L---SGAIRVNP------------WDIDAVADAMTLAI-----NMRD----SEKQLRHEK-HYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 488 l---~~al~VnP------------~d~~~~A~ai~~aL-----~m~~----~er~~r~~~-~~~~V~~~~~~~Wa~~~l~ 542 (780)
. .+|..+.+ .|.+++-++|.+++ +.++ .+...++++ |......+++.+-++.+.+
T Consensus 517 ~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 517 GYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred cCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 3 24788885 89999999998877 2211 122333333 4444446888888887765
Q ss_pred H
Q 003999 543 D 543 (780)
Q Consensus 543 ~ 543 (780)
.
T Consensus 597 ~ 597 (601)
T TIGR02094 597 K 597 (601)
T ss_pred H
Confidence 4
No 126
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.91 E-value=2.8e-08 Score=98.66 Aligned_cols=166 Identities=17% Similarity=0.147 Sum_probs=104.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--CCceEEecCccEEeeCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EMLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~~lgliaenG~~ir~~~~ 667 (780)
..++||+|+||||++++ ....|. ...|.+|.+ .|..|+.+|..++..+..+-..+ +...+|||||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~pA---~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQPA---APVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCcc---chHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999943 455554 445556666 59999999999999988777654 457899999999998753
Q ss_pred CceEecCC---------CcChh-HHHHHHHHHHHHHhcCCCceeec----------------------ccceEEEeeccC
Q 003999 668 SEWETNHL---------GADLE-WKKIVEPVMRSYTEATDGSNIEI----------------------KESALVWHHQDA 715 (780)
Q Consensus 668 ~~w~~~~~---------~~d~~-wk~~v~~i~~~~~e~t~gs~iE~----------------------k~~~l~~hyr~a 715 (780)
|..... ..... -.+.+++.++.+.+..--.+..+ .+.+.+...+..
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 442110 00100 11233333333332211111110 011111111111
Q ss_pred CCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCC
Q 003999 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCV 771 (780)
Q Consensus 716 d~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i 771 (780)
.+....+...|...+++++.|..+..|......||.|++++++.+-.
T Consensus 159 ---------d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~r 205 (274)
T COG3769 159 ---------DERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRR 205 (274)
T ss_pred ---------chHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHh
Confidence 23344556666677899999999999999999999999999986543
No 127
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.87 E-value=7.2e-09 Score=97.85 Aligned_cols=128 Identities=21% Similarity=0.226 Sum_probs=89.0
Q ss_pred CeEEEEeccccccCChHHHHH-HHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 334 KKLILGIDDMDIFKGISLKLL-AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
..++++.|++.+.||+..+++ |++++.+++|+++ |+.+|. +++ ++.++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~-----~~~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGN-----GPD------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECE-----SS-------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeC-----CHH------HHHHh----cC-------CCE
Confidence 467899999999999999999 9999999999755 877774 222 12222 11 136
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-- 489 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (780)
.+. +.+ +|+.++|+.||+++.|+. .+|++...+|||++| .|+|+|.. |+...+.
T Consensus 56 ~~~-g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G-------------------~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 56 RFH-GFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG-------------------KPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---------------------EEEEHH-HCHCHS---
T ss_pred EEc-CCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC-------------------CCEEECCc-chhhheeec
Confidence 655 456 689999999999999985 789999999999997 47888887 5555552
Q ss_pred -CcEEECCCCHHHHHHHHHHHHc
Q 003999 490 -GAIRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 490 -~al~VnP~d~~~~A~ai~~aL~ 511 (780)
.++.+ +.|+++++++|.+++.
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999885
No 128
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.87 E-value=1.3e-07 Score=105.61 Aligned_cols=141 Identities=17% Similarity=0.176 Sum_probs=92.2
Q ss_pred HHHHHcC---CCeEE-EE-eccccccC-ChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q 003999 326 EIEKQFD---GKKLI-LG-IDDMDIFK-GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR 399 (780)
Q Consensus 326 ~lr~~~~---~~~vi-l~-Vdrld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 399 (780)
.+++++. ++++| +. -.|....| ++...++|++.+.+++|+++ +++++. .++..+ ++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~----~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRRE----QIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHH----HHHHHHhh
Confidence 3455552 45543 33 34666654 47888999999988888765 665542 122222 33333322
Q ss_pred HhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc
Q 003999 400 INEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (780)
Q Consensus 400 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (780)
.. | . .+.++. .++..+|+.||+++.+| |.+.+|+|+||. |+|++
T Consensus 243 ~~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-------------------PvI~~ 286 (380)
T PRK00025 243 YA---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-------------------PMVVG 286 (380)
T ss_pred cC---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-------------------CEEEE
Confidence 10 1 1 244443 37899999999999998 778889999974 66665
Q ss_pred -----------------CCCCccccCCC-----cEEECCCCHHHHHHHHHHHHcCCH
Q 003999 480 -----------------EFIGCSPSLSG-----AIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 480 -----------------e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.+.|.++.+.+ +++++..|++++++++.++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 287 YKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred EccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 44454555532 367788899999999999998764
No 129
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.79 E-value=1.3e-06 Score=99.68 Aligned_cols=344 Identities=16% Similarity=0.216 Sum_probs=162.1
Q ss_pred cccccccccccCCCCCCCCCccCHHhHHH--HHHHHHHHHHHHHHHcCCC-CCEEEEeCCccchHHHHHHHhcCCCcEEE
Q 003999 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQA--YVSANKIFADKVMEVINPD-DDCVWVHDYHLMVLPTFLRKRFNRIKLGF 227 (780)
Q Consensus 151 ~~~LWpl~H~~~~~~~~~~~~f~~~~w~~--Y~~vN~~fA~~v~~~~~~~-~DiVwvhDyhl~llp~~lr~~~~~~~i~~ 227 (780)
+.-||-.|+--.+. .+.++.++ +--+...|-+.+.+..... .=+.+.|.|..-+-.-++|++.|++.-+|
T Consensus 100 k~~lW~~~gIdS~~-------~~~dynea~~Fgyava~fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvF 172 (633)
T PF05693_consen 100 KGELWELFGIDSPH-------GDGDYNEAVMFGYAVAWFIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVF 172 (633)
T ss_dssp HHHHHHHH-----T-------T-HHHHHHHHHHHHHHHHHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEE
T ss_pred HHHHHHHcCCCCCC-------CCcchhHHHHHHHHHHHHHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEE
Confidence 45688888764332 22222221 1112233333333333311 12567788877666678999999999999
Q ss_pred EEeCCCC-------ChhHhhcCCC---hH-----------HHHHh-hhcCCEEEeecHHHHHHHHHHHHhhhCceeccCC
Q 003999 228 FLHSPFP-------SSEIYRTLPV---RD-----------EILRG-LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKR 285 (780)
Q Consensus 228 flH~PfP-------~~e~~~~lp~---r~-----------eil~~-ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~ 285 (780)
+.|---+ +.++|..|+. .+ -|-++ -..||..-..+.--+ .-|..+|+
T Consensus 173 TTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvFTTVSeITa----~Ea~~LL~------- 241 (633)
T PF05693_consen 173 TTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVFTTVSEITA----KEAEHLLK------- 241 (633)
T ss_dssp EESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEEEESSHHHH----HHHHHHHS-------
T ss_pred EecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCeeeehhhhHH----HHHHHHhC-------
Confidence 9996543 2234444441 11 11111 223444332222110 01222222
Q ss_pred ceeEEEEcCeEEEEEEeecCCCchhhhhhcC----CchhHHHHHHH-HHHc-------CCCeEEEE-ecccc-ccCChHH
Q 003999 286 GHIGLDYFGRTVYIKILPVGVHMGRLESVLN----LPATATKIKEI-EKQF-------DGKKLILG-IDDMD-IFKGISL 351 (780)
Q Consensus 286 g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~----~~~~~~~~~~l-r~~~-------~~~~vil~-Vdrld-~~KGi~~ 351 (780)
|..- -|.|+|+|.+.|...-. ....++++.++ +..| .+++++++ .||.+ ..||++.
T Consensus 242 ---------r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~ 311 (633)
T PF05693_consen 242 ---------RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV 311 (633)
T ss_dssp ---------S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH
T ss_pred ---------CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH
Confidence 2211 35799999988765311 01123344443 3333 24565555 89999 5799999
Q ss_pred HHHHHHHHH---HhCCCCCCceEEEEEEcCCCCChhH---------HHHHHHHHHHHHHHHhhc-c-----CC-------
Q 003999 352 KLLAMEQLL---QQHPGMRGKVVLVQIVNPARGSGKD---------VQEAKKETYLTAKRINEV-Y-----GS------- 406 (780)
Q Consensus 352 ~l~A~~~ll---~~~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~ei~~lv~~In~~-~-----g~------- 406 (780)
.|+|+.+|- +... ..-.||.. |-.|+....-. +.++++.+.++.++|..+ | |.
T Consensus 312 fieAL~rLn~~lk~~~-~~~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~ 389 (633)
T PF05693_consen 312 FIEALARLNHRLKQAG-SDKTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNEL 389 (633)
T ss_dssp HHHHHHHHHHHHHHTT--S-EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHC
T ss_pred HHHHHHHHHHHHhhcC-CCCeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHh
Confidence 999998873 2221 11224433 34466543211 122333333333333111 0 11
Q ss_pred --------------------------------------------------CCcccEEEecCCCC------HHHHHHHHHh
Q 003999 407 --------------------------------------------------PNYEPVVLIDRPVP------RFEKSAYYAV 430 (780)
Q Consensus 407 --------------------------------------------------~~~~pV~~~~~~v~------~~el~aly~~ 430 (780)
.+-..|+|....++ .-++..+.+.
T Consensus 390 ~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G 469 (633)
T PF05693_consen 390 LDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG 469 (633)
T ss_dssp S-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH
T ss_pred cChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc
Confidence 01124665543332 3467889999
Q ss_pred cceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC--------CCcE-EECCC--C-
Q 003999 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--------SGAI-RVNPW--D- 498 (780)
Q Consensus 431 ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~al-~VnP~--d- 498 (780)
+|++|+||.+|++|.+|+|++|.+ .|-|.|..+|...-+ ..|+ +|+-. |
T Consensus 470 cdLgvFPSYYEPWGYTPlE~~a~g-------------------VPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~ 530 (633)
T PF05693_consen 470 CDLGVFPSYYEPWGYTPLECTAFG-------------------VPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNY 530 (633)
T ss_dssp SSEEEE--SSBSS-HHHHHHHHTT---------------------EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-H
T ss_pred CceeeeccccccccCChHHHhhcC-------------------CceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCH
Confidence 999999999999999999999986 588999999865222 1244 44432 2
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 499 ---IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 499 ---~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
++++|+.|.+...++..+|.....+..+.-..-+|.+-..-+.+.
T Consensus 531 ~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 531 DESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 467777788888888776665444443333345665555544444
No 130
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.78 E-value=5e-07 Score=99.45 Aligned_cols=239 Identities=13% Similarity=0.059 Sum_probs=135.7
Q ss_pred HHHHcCCCCCEEEEeCCccch--HHH-HHHH-hcCCCcEEEEEeCCCCChhHhhcCC-ChHHHHHhhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMV--LPT-FLRK-RFNRIKLGFFLHSPFPSSEIYRTLP-VRDEILRGLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~~~lp-~r~eil~~ll~~Dligf~t~~y 265 (780)
+...+++ +|+|++|..-+.. ++. ++++ +..++|+++++|--+|.. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4445666 4999999754331 222 2222 112699999999877632 11111 1222233445689999999876
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~ 345 (780)
.+.+.+ .|+. ..++.++|+..+..... .+....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhh
Confidence 555532 1221 11233334332221100 0011234568999999994
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
..++ .+..|+++ |+++|. |++.. . . ...|+| .|.++.+|+.
T Consensus 181 ~~~l----------~~~~~~~~----l~i~G~-----g~~~~-----------~-----~---~~~V~f-~G~~~~eel~ 221 (333)
T PRK09814 181 SPFL----------KNWSQGIK----LTVFGP-----NPEDL-----------E-----N---SANISY-KGWFDPEELP 221 (333)
T ss_pred chHH----------HhcCCCCe----EEEECC-----Ccccc-----------c-----c---CCCeEE-ecCCCHHHHH
Confidence 3321 11345544 776663 22211 0 0 113664 4689999999
Q ss_pred HHHHhcceeeeccCC-----------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---Cc
Q 003999 426 AYYAVAECCIVNAVR-----------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA 491 (780)
Q Consensus 426 aly~~ADv~vvtS~r-----------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (780)
++|+. |+.+++.-. -.++--..|||||| .|+|++..++.++.+. .|
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-------------------~PVI~~~~~~~~~~V~~~~~G 281 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-------------------LPVIVWSKAAIADFIVENGLG 281 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-------------------CCEEECCCccHHHHHHhCCce
Confidence 99998 666654321 23344478899997 4899999988888882 38
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
+.|+ +.++++++|.++ ++++++++.++.++....
T Consensus 282 ~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 282 FVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred EEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 8888 788999999873 344554444445554443
No 131
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.73 E-value=3.9e-07 Score=96.25 Aligned_cols=182 Identities=12% Similarity=0.142 Sum_probs=131.3
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCC--CCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPG--MRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++| ..|+ ++-++.-+.+++++++++.. +
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRn--eeD~ervk~Lkd~a~~L~i~-~----- 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRN--EEDEERVKSLKDLAEELKIP-K----- 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCC--hhhHHHHHHHHHHHHhcCCc-c-----
Confidence 457899999999999999 67777777888887 33457787666 4554 33345556678888877643 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc-ccC-
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS-PSL- 488 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-~~l- 488 (780)
.|. +.-++|.+++..+|..|-+-|-+-..|-||+...||||+|. .+|+-.-+|.. +.+
T Consensus 338 ~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-------------------Ipi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 338 HVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-------------------IPIVHNSGGPLLDIVT 397 (465)
T ss_pred ceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-------------------eEEEeCCCCCceeeee
Confidence 355 44589999999999999999999999999999999999963 22222222211 111
Q ss_pred --C---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 489 --S---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 489 --~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
. .|++. | +.++-|+++.+++++..+||....+..+..+.++.-+..-+.|...+..
T Consensus 398 ~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 398 PWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred ccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 26665 2 6788899999999999988777666677778777766666665544433
No 132
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.67 E-value=2e-06 Score=99.80 Aligned_cols=255 Identities=15% Similarity=0.104 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCEEE--EeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCC--hHHHHHh
Q 003999 180 YVSANKIFADKVMEV----INPDDDCVW--VHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV--RDEILRG 251 (780)
Q Consensus 180 Y~~vN~~fA~~v~~~----~~~~~DiVw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~--r~eil~~ 251 (780)
|...+..++..+-+. .. ++|++. .+.-|... +....|..++.+..|+ -+. |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhC
Confidence 444455555544433 33 457777 66666655 4444454445556665 211 22 2456666
Q ss_pred hhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc
Q 003999 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (780)
Q Consensus 252 ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~ 331 (780)
+-.+|.+..-|.+-.+..... ++- .. ...+|..+|++.= +... ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~----~~~------------~~-~~~~v~~Ip~~~~--~~~~------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEEN----YRE------------NY-VEFDISRITPFDT--RLRL------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHH----hhh------------cc-cCCcceeeCccce--EEec------------Chhhcc
Confidence 777887776675433333211 110 00 1123444565533 1110 012334
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC-c-
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN-Y- 409 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~-~- 409 (780)
+++.|.+++||+ +.|-+...|+|+.++++++|+.. |...|... . .+..+.++++++++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999977 76666321 1 2335566777777766532210 0
Q ss_pred -----------------c---cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCC
Q 003999 410 -----------------E---PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (780)
Q Consensus 410 -----------------~---pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (780)
. ..+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+|||+.|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------- 452 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------- 452 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC--------------
Confidence 0 1344666677779999999999999999999999 9999999863
Q ss_pred CCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 470 SPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
|.| .-|.++.+ + +|.+| .|+.++++||...|+.+.
T Consensus 453 -----PqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 453 -----PQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred -----Cee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 555 45666666 2 58999 699999999999999774
No 133
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.62 E-value=4e-06 Score=100.51 Aligned_cols=182 Identities=10% Similarity=0.021 Sum_probs=118.5
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
..+|.++.|+...||..++|..++++++ .+|+ ..+.+|..|.....+ ..-+++.+++.++++. -+|. + .
T Consensus 478 ~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d-~~gK~iIk~i~~~a~~--p~~~--~--k 548 (778)
T cd04299 478 VLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPAD-EPGKELIQEIVEFSRR--PEFR--G--R 548 (778)
T ss_pred ccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccc-hHHHHHHHHHHHHHhC--cCCC--C--c
Confidence 3478889999999999999999999865 3454 247777666433222 1113444455555431 0222 1 4
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (780)
|+|+.+ .+..--..+++.|||++.||. .|.-|+.-.-||.- |.|-+|..-|...+-
T Consensus 549 Vvfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N--------------------G~LnlSvlDGww~E~~ 607 (778)
T cd04299 549 IVFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN--------------------GGLNLSVLDGWWDEGY 607 (778)
T ss_pred EEEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc--------------------CCeeeecccCcccccc
Confidence 777764 455555678999999999999 78777777666652 678888888766554
Q ss_pred C--CcEEECC------------CCHHHHHHHHHHHHc----------CCHHHHHHHHHH-HhhHhhhCCHHHHHHHHHHH
Q 003999 489 S--GAIRVNP------------WDIDAVADAMTLAIN----------MRDSEKQLRHEK-HYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 489 ~--~al~VnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~l~~ 543 (780)
. +|..+.+ .|.+++-+.|.+.+- .|. +...+++. +....-.+++.+-++.|++.
T Consensus 608 ~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~-~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 608 DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPP-GWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 3 4788877 555666666655443 132 33444444 44445568989999988888
Q ss_pred HHH
Q 003999 544 LER 546 (780)
Q Consensus 544 l~~ 546 (780)
+-.
T Consensus 687 ~Y~ 689 (778)
T cd04299 687 FYL 689 (778)
T ss_pred hHH
Confidence 763
No 134
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.56 E-value=5.5e-07 Score=88.14 Aligned_cols=179 Identities=18% Similarity=0.210 Sum_probs=122.8
Q ss_pred HHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc--CC-CceEEecCccE
Q 003999 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP--CE-MLGIAAEHGYF 661 (780)
Q Consensus 585 ~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~--l~-~lgliaenG~~ 661 (780)
++++-..-|+++|.||||++ .....++++.+.|++|++ ..++.+|-|-+.+.+.+.++. +. -.+..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45555667999999999999 667899999999999886 689999999999999888854 11 24788999987
Q ss_pred EeeCCCCce-EecCCCc-ChhHHHHHHHHHHHHHh----cCCCceeecccceEEEee--ccCCC----Cccccc-----H
Q 003999 662 IRWNKTSEW-ETNHLGA-DLEWKKIVEPVMRSYTE----ATDGSNIEIKESALVWHH--QDADP----DFGSCQ-----A 724 (780)
Q Consensus 662 ir~~~~~~w-~~~~~~~-d~~wk~~v~~i~~~~~e----~t~gs~iE~k~~~l~~hy--r~ad~----d~~~~q-----a 724 (780)
-+..+...- +++.... +...++.+.-++.++.+ ...|.+||-++..+...- |+|.. +|.... -
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 776543210 1110000 11123333334455554 246899998887765542 34421 122111 1
Q ss_pred HHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003999 725 KELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLS 768 (780)
Q Consensus 725 ~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (780)
+.+...|++.+++.+++. +.|+..+||-|.|++|-..++.|-+.
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d 204 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD 204 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc
Confidence 245678888888888885 56899999999999999999988765
No 135
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.42 E-value=4.1e-07 Score=89.08 Aligned_cols=71 Identities=11% Similarity=0.187 Sum_probs=56.7
Q ss_pred eEEeCCCCCCCCCCCC--------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH---HHhcc-------CCCceE
Q 003999 593 AIFLDYDGTVVPETSI--------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS---EWLAP-------CEMLGI 654 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~--------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~f~~-------l~~lgl 654 (780)
+|++|+||||+..... ....++.+.+++++|++. |+.|+++|||+..... +|+.. +|..++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 5899999999983200 157789999999999995 9999999999988774 67755 444578
Q ss_pred EecCccEEee
Q 003999 655 AAEHGYFIRW 664 (780)
Q Consensus 655 iaenG~~ir~ 664 (780)
++.||+++..
T Consensus 80 i~~~g~~~~~ 89 (157)
T smart00775 80 LLSPDRLFAA 89 (157)
T ss_pred EEcCCcchhh
Confidence 9999998864
No 136
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.39 E-value=3.9e-05 Score=86.29 Aligned_cols=140 Identities=17% Similarity=0.131 Sum_probs=86.6
Q ss_pred HHHHc---CCCeEEE--Eeccccc-cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q 003999 327 IEKQF---DGKKLIL--GIDDMDI-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI 400 (780)
Q Consensus 327 lr~~~---~~~~vil--~Vdrld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~I 400 (780)
.|+++ +++++|+ +.+|..+ .|+++..++|++.+.+++|+++ ++..+.+. ... ..++++.+..
T Consensus 181 ~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~ 248 (385)
T TIGR00215 181 AREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEY 248 (385)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHh
Confidence 34455 3555553 4569887 7999999999999999899876 54333221 111 1222332222
Q ss_pred hhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-
Q 003999 401 NEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS- 479 (780)
Q Consensus 401 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S- 479 (780)
+. +. .|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 249 ----~~-~~-~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-------------------P~Vv~y 293 (385)
T TIGR00215 249 ----GP-DL-QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-------------------PMVVGY 293 (385)
T ss_pred ----CC-CC-cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-------------------CEEEEE
Confidence 21 11 3554433 3457999999999999 667779999985 33443
Q ss_pred ----------------CCCCccccCC--Cc---EEECCCCHHHHHHHHHHHHcCC
Q 003999 480 ----------------EFIGCSPSLS--GA---IRVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 480 ----------------e~~G~~~~l~--~a---l~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.+.+.+..+. ++ ++-+-.+++.+++++.+.|+.+
T Consensus 294 k~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 294 RMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred cCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 1333333332 11 2223457899999999999887
No 137
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.32 E-value=0.00023 Score=78.50 Aligned_cols=302 Identities=18% Similarity=0.223 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCCc----cchHHHH--HHHhcCCCcEEEEEeCCC---------CChhHhhcCCCh
Q 003999 181 VSANKIFADKVMEVINPDDDCVWVHDYH----LMVLPTF--LRKRFNRIKLGFFLHSPF---------PSSEIYRTLPVR 245 (780)
Q Consensus 181 ~~vN~~fA~~v~~~~~~~~DiVwvhDyh----l~llp~~--lr~~~~~~~i~~flH~Pf---------P~~e~~~~lp~r 245 (780)
.+.+++|+ .......|++..||+|--- ..++|-. ||+++|+.++..+.=+|= +..-.-..+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 45667776 1123334567899999654 3344444 899999999998876652 222222234432
Q ss_pred H-HHHHhh---hcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEE---------------------EEE
Q 003999 246 D-EILRGL---LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV---------------------YIK 300 (780)
Q Consensus 246 ~-eil~~l---l~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~---------------------~i~ 300 (780)
. -..+.. ...|+..|...+.=-|++..|.+. |+.. +-.++|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~--------~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPL--------VLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCE--------EEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 122222 235666666666666666655431 2110 11111100 000
Q ss_pred EeecCCCchhhhhh---------------cCCchhHHHHHHHHHHcCC-CeEEEEeccccccCChHHHHHHHHHHHHhCC
Q 003999 301 ILPVGVHMGRLESV---------------LNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHP 364 (780)
Q Consensus 301 i~P~GId~~~~~~~---------------~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P 364 (780)
+.-.-+|.++|... ...|........+|+++++ +++++..+. ...--...+.|+..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCC
Confidence 11111222222211 1123445566778888877 888888888 22333447889999999999
Q ss_pred CCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCC---C----CcccEEEecCCCCHHHHHHHHHhcceeeec
Q 003999 365 GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS---P----NYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~---~----~~~pV~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
+.. ||.| |- -++ =-..+++++++.|-+++. . ..++|.+.+ +.-|+..||++||++.|-
T Consensus 260 ~~l----lIlV--PR---HpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LILV--PR---HPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EEEe--cC---Chh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEEC
Confidence 875 4433 32 232 234677788887755532 1 223465443 467999999999998873
Q ss_pred -cCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc----CCCCccccC---CCcEEECCCCHHHHHHHHHHH
Q 003999 438 -AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS----EFIGCSPSL---SGAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 438 -S~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~al~VnP~d~~~~A~ai~~a 509 (780)
|+-.==|==++|..+|+ .|+|.. .|.-+.+.| ++++.|+. .+.++++++..
T Consensus 325 GSlv~~GGHN~LEpa~~~-------------------~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l 383 (419)
T COG1519 325 GSLVPIGGHNPLEPAAFG-------------------TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELL 383 (419)
T ss_pred CcccCCCCCChhhHHHcC-------------------CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHh
Confidence 44321123368999986 356653 333344444 24677774 78888888888
Q ss_pred HcCCHHHHHHHHHHHhhHhhhC
Q 003999 510 INMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~~~ 531 (780)
++. +.+|+.+.++..+.|..+
T Consensus 384 ~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 384 LAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred cCC-HHHHHHHHHHHHHHHHHh
Confidence 876 556777778888888665
No 138
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.18 E-value=3.7e-06 Score=85.07 Aligned_cols=151 Identities=17% Similarity=0.223 Sum_probs=98.0
Q ss_pred HHHHHHHhccCCCCEEEEEcCCChhhHHHHhc-c-C-C-CceEEecCccEEeeCCCCceEecCC-CcC-hhHHHHHHHHH
Q 003999 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA-P-C-E-MLGIAAEHGYFIRWNKTSEWETNHL-GAD-LEWKKIVEPVM 689 (780)
Q Consensus 616 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~-~-l-~-~lgliaenG~~ir~~~~~~w~~~~~-~~d-~~wk~~v~~i~ 689 (780)
+.+.|++|.+ ...|.||||-++..+++.+. . + . ..++.+|||..++..+...|...+. ... ..-++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678889987 69999999999999999884 2 1 1 3479999999888887667754321 111 12233344444
Q ss_pred HHHHh----cCCCceeecccceEEEee--ccCCC----Ccccc----cH-HHHHHHHHHHhcCCCeEE-EEcCeEEEEEe
Q 003999 690 RSYTE----ATDGSNIEIKESALVWHH--QDADP----DFGSC----QA-KELLDHLESVLANEPAVV-KRGQHIVEVKP 753 (780)
Q Consensus 690 ~~~~e----~t~gs~iE~k~~~l~~hy--r~ad~----d~~~~----qa-~el~~~L~~~l~~~~v~v-~~g~~~vEI~p 753 (780)
++..+ ...|.+||.+.+.+.+.- |+|.. +|.++ .. +.+++.|.+.+.+.++++ +-|+..+||.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44443 246999999999988874 33421 12111 11 246677777778778886 46899999999
Q ss_pred CCCCHHHHHHHHHHH
Q 003999 754 QVLRPSSISVSLSLS 768 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~ 768 (780)
+|++|..+++.|.+.
T Consensus 159 ~GwDKty~Lr~l~~~ 173 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE 173 (220)
T ss_dssp TT-SGGGGGGGTTTT
T ss_pred CCccHHHHHHHHHhc
Confidence 999999999998663
No 139
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.16 E-value=6.3e-06 Score=72.81 Aligned_cols=87 Identities=16% Similarity=0.237 Sum_probs=70.1
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C--cEEECCCCHHHHHHHHHHH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G--AIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~a 509 (780)
+++.|+..+|++...+|+|||| +|+|.+...+....+. | ++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G-------------------~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG-------------------TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC-------------------CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 4677888899999999999996 4666666667777773 3 67788 999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYVS-THDVAYWARSFA 541 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l 541 (780)
++.|+ +++...++.+++|. .|++..=++.|+
T Consensus 60 l~~~~-~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LENPE-ERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99764 67777788889987 688877777665
No 140
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.01 E-value=7.9e-05 Score=84.74 Aligned_cols=131 Identities=12% Similarity=0.138 Sum_probs=96.9
Q ss_pred cCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 331 FDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 331 ~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
++++.++++ + ...|+|++.+.++.|++. |=+ |..+ ++..++.++ + +| .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~----~y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-D----KY-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-H----hc-----C
Confidence 455556666 1 899999999999999987 654 5433 111334444 2 22 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc--CCCCccccC
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS--EFIGCSPSL 488 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S--e~~G~~~~l 488 (780)
.|+.+.+ +....+..+|..||+++.+|..||+++...||+..| .+|+| ...|-.+.+
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G--------------------~pI~afd~t~~~~~~i 387 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYN--------------------LLILGFEETAHNRDFI 387 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcC--------------------CcEEEEecccCCcccc
Confidence 3666664 445678899999999999999999999999999864 44444 334555555
Q ss_pred CCcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 489 SGAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 489 ~~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.++.++++.|+++|+++|.++|+.+.
T Consensus 388 ~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 388 ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 66889999999999999999999875
No 141
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.95 E-value=1.2e-05 Score=75.35 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=41.5
Q ss_pred ceEEeCCCCCCCCCCC---CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 592 RAIFLDYDGTVVPETS---IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~---~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
|+|++|+||||+.... ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987421 114578999999999988 49999999999987654
No 142
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.84 E-value=3.4e-05 Score=81.74 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=57.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCC---CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--C-ceEEecCccEEee
Q 003999 591 RRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--M-LGIAAEHGYFIRW 664 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~p---s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~-lgliaenG~~ir~ 664 (780)
.++|+||+||||++ ..+.+ ++.+.++|++|.+. |+.++|+|++++..+.+.+..+. . ...|..+|...+.
T Consensus 126 ~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~ 201 (301)
T TIGR01684 126 PHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE 201 (301)
T ss_pred ceEEEEecCCCCcC---CCCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence 56999999999999 44443 59999999999995 99999999999998888887652 1 2467778877665
Q ss_pred C
Q 003999 665 N 665 (780)
Q Consensus 665 ~ 665 (780)
.
T Consensus 202 k 202 (301)
T TIGR01684 202 Y 202 (301)
T ss_pred C
Confidence 4
No 143
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.68 E-value=5e-05 Score=70.60 Aligned_cols=70 Identities=21% Similarity=0.247 Sum_probs=54.7
Q ss_pred eEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEe
Q 003999 593 AIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIR 663 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir 663 (780)
+++||+||||.+..+. ...+.+.+.+.|++|++. |+.++|+|||....+..++..+. ...+++.++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 5899999999995531 236789999999999995 89999999999999999997652 1245666665544
No 144
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.43 E-value=0.00027 Score=75.08 Aligned_cols=71 Identities=18% Similarity=0.112 Sum_probs=54.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCC---CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--C-ceEEecCccEEee
Q 003999 591 RRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--M-LGIAAEHGYFIRW 664 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~p---s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~-lgliaenG~~ir~ 664 (780)
.++|++|+||||++ ....+ ++.+.++|.+|++. |..++|+|+.++..+...++.+. . ...+..+|.....
T Consensus 128 ~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k 203 (303)
T PHA03398 128 PHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGE 203 (303)
T ss_pred ccEEEEecCCCccC---CCCccccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccc
Confidence 57999999999999 44455 68999999999994 99999999888888888777542 1 2356667765554
Q ss_pred C
Q 003999 665 N 665 (780)
Q Consensus 665 ~ 665 (780)
.
T Consensus 204 ~ 204 (303)
T PHA03398 204 Y 204 (303)
T ss_pred c
Confidence 4
No 145
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.05 E-value=0.00033 Score=74.37 Aligned_cols=54 Identities=19% Similarity=0.236 Sum_probs=41.7
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
|+|+||+||||+......+.+.+.+.++|++|++. |.+|+++|||+....+...
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~~~~~~ 55 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKESKQDLL 55 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHH
Confidence 68999999999983211123778999999999995 9999999998877643333
No 146
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.03 E-value=0.00058 Score=72.10 Aligned_cols=65 Identities=20% Similarity=0.256 Sum_probs=51.0
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccCC----CceEEecCccE
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPCE----MLGIAAEHGYF 661 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l~----~lgliaenG~~ 661 (780)
|+|++|+||||+. .+..+ +.+.++|++|++. |++|+++|| |++..+.+.+..+. .-.+++.+|+.
T Consensus 2 ~~~~~D~DGtl~~---~~~~i-~~a~~~l~~l~~~-g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~ 73 (249)
T TIGR01457 2 KGYLIDLDGTMYK---GKERI-PEAETFVHELQKR-DIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMAT 73 (249)
T ss_pred CEEEEeCCCceEc---CCeeC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHH
Confidence 6899999999998 34444 4789999999995 999999995 88998888887542 22377777764
No 147
>PRK10444 UMP phosphatase; Provisional
Probab=96.98 E-value=0.00045 Score=72.92 Aligned_cols=58 Identities=10% Similarity=0.152 Sum_probs=47.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCce
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lg 653 (780)
.++|++|+||||+. .+ ++.+.+.++|++|++. |.+++++|+|+.....++...+..+|
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L~~~-g~~~~~~Tn~~~~~~~~~~~~l~~~G 58 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRILDK-GLPLVLLTNYPSQTGQDLANRFATAG 58 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 36899999999998 33 5778999999999995 99999999999887766665543333
No 148
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.96 E-value=0.0013 Score=62.12 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=43.4
Q ss_pred ceEEeCCCCCCCCCCC--CCC-------CCCHHHHHHHHHhccCCCCEEEEEcCC-ChhhHHHHhcc
Q 003999 592 RAIFLDYDGTVVPETS--IIK-------SPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWLAP 648 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~--~~~-------~ps~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~f~~ 648 (780)
|+|++|+||||++... ... .+-+.+.++|+.|++. |..++|+|++ ........+..
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998521 122 2468999999999985 9999999999 67666665543
No 149
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.95 E-value=0.001 Score=62.78 Aligned_cols=57 Identities=25% Similarity=0.328 Sum_probs=45.5
Q ss_pred ceEEeCCCCCCCCCCC-----CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC--------hhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG--------RSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~-----~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~--------~~~L~~~f~~l 649 (780)
|+|+||+||||++... ....+.+.+.++|+.|.+. |++++|+|+++ ...+..++..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999996211 1235678899999999985 99999999999 77777777754
No 150
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.82 E-value=0.00068 Score=68.12 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=44.0
Q ss_pred ccCceEEeCCCCCCCCCC----CCCCCCCHHH---HHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPET----SIIKSPGPEV---ISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~----~~~~~ps~~~---~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...|+|++|+||||++.. ......+... ...++.|.+ .|+.++|+|||+...+...++.+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 358999999999999841 1122222222 257777777 59999999999999998888765
No 151
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.81 E-value=0.0021 Score=67.16 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=52.1
Q ss_pred ccCCHHHHHHHHHhccCceEEeCCCCCCCCCCC---CC-CCCC---------------------------HHHHHHHHHh
Q 003999 575 RRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS---II-KSPG---------------------------PEVISVLKTL 623 (780)
Q Consensus 575 ~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~---~~-~~ps---------------------------~~~~~~L~~L 623 (780)
.=.++++|.++-...+.-+|+||+||||++..+ .. ..++ +.+.++|+.|
T Consensus 47 ~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l 126 (237)
T TIGR01672 47 HWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH 126 (237)
T ss_pred eEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH
Confidence 345889999887766666999999999998654 11 1112 2278899999
Q ss_pred ccCCCCEEEEEcCC----ChhhHHHHhc
Q 003999 624 CSDPNNTVFIVSGR----GRSSLSEWLA 647 (780)
Q Consensus 624 ~~d~g~~V~IvSGR----~~~~L~~~f~ 647 (780)
.+. |.+++|||+| ....++..++
T Consensus 127 ~~~-G~~i~iVTnr~~~k~~~~a~~ll~ 153 (237)
T TIGR01672 127 QRR-GDAIFFVTGRTPGKTDTVSKTLAK 153 (237)
T ss_pred HHC-CCEEEEEeCCCCCcCHHHHHHHHH
Confidence 985 9999999999 4345555554
No 152
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.69 E-value=0.00065 Score=66.27 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=41.3
Q ss_pred ceEEeCCCCCCCCCCC---CCC-C-----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETS---IIK-S-----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~---~~~-~-----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
|++|||+||||+++.. .+. . ..+. .+|++|++. |.+++|+||++...+...++.+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHHHHc
Confidence 7999999999998421 111 1 1122 278999884 9999999999999998888765
No 153
>PLN02645 phosphoglycolate phosphatase
Probab=96.69 E-value=0.001 Score=72.64 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=44.3
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.++|+||+||||.. .+ .+-+.+.++|++|++. |.+|+++|+|+.......+..+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~lr~~-g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDMLRSM-GKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHHHHC-CCEEEEEeCCCCCCHHHHHHHH
Confidence 468999999999998 33 3557789999999995 9999999999966665555443
No 154
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.67 E-value=0.0011 Score=71.21 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=39.7
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
.++|++|+||||+. ... +-+.+.++|++|.+. |.+|+++|||+.....+.+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L~~~-g~~~~~~Tnns~~~~~~~~ 52 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRLARA-GKAALFVTNNSTKSRAEYA 52 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHH
Confidence 47899999999998 333 445689999999984 9999999998755444433
No 155
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.32 E-value=0.0055 Score=60.60 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=36.7
Q ss_pred cCceEEeCCCCCCCCCCCCCC---C------CCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 590 ERRAIFLDYDGTVVPETSIIK---S------PGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~---~------ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
+.|++++|+||||+...+... . +-+.+.++|++|.+. |.+++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 358999999999997432110 1 236789999999984 999999997554
No 156
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.23 E-value=0.017 Score=56.17 Aligned_cols=64 Identities=22% Similarity=0.246 Sum_probs=54.2
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceE
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgl 654 (780)
++...|-|++|+|.||++.. +...++++++-+..+++. |++|+|+|-.....+..|...+ ++.+
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~-gi~v~vvSNn~e~RV~~~~~~l-~v~f 87 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEA-GIKVVVVSNNKESRVARAAEKL-GVPF 87 (175)
T ss_pred HHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhc-CCEEEEEeCCCHHHHHhhhhhc-CCce
Confidence 45688999999999999964 356789999999999994 9999999999999998888765 3434
No 157
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=96.14 E-value=0.017 Score=60.78 Aligned_cols=85 Identities=26% Similarity=0.528 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCCccchHHHHHHHhcC------CCcEEEEEeCC-----CCChhHhh--cCCCh----
Q 003999 186 IFADKVMEVINP---DDDCVWVHDYHLMVLPTFLRKRFN------RIKLGFFLHSP-----FPSSEIYR--TLPVR---- 245 (780)
Q Consensus 186 ~fA~~v~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-----fP~~e~~~--~lp~r---- 245 (780)
.|+.++++.++. .-|+||+||||..++|.+||.... ++++.|++|.. ||. +.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 455555555532 349999999999999999999853 69999999964 232 2221 12321
Q ss_pred ----------HHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 246 ----------DEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 246 ----------~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.-+-.|+..||.|..-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 23446788999999999999876654
No 158
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.60 E-value=1.6 Score=48.30 Aligned_cols=273 Identities=16% Similarity=0.154 Sum_probs=143.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCcc--chHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh
Q 003999 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHL--MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL 252 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l 252 (780)
..|..|.+.=+.+ .+ -+| |++..=|+.= ..+...+|+..|++||+++. ++.+| .||..-...+
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVW---AWr~~Ra~~i 133 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVW---AWRPKRAVKI 133 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----Cccee---eechhhHHHH
Confidence 3466665433322 22 245 7777777652 35678899999999998754 23344 2444333333
Q ss_pred h-cCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc
Q 003999 253 L-NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (780)
Q Consensus 253 l-~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~ 331 (780)
. .+|++.--.+... .|.+. .|+. ..|-|++. .|.-.+.+ ..+..|+++
T Consensus 134 ~~~~D~lLailPFE~-~~y~k----~g~~---------~~yVGHpl--------~d~i~~~~---------~r~~ar~~l 182 (381)
T COG0763 134 AKYVDHLLAILPFEP-AFYDK----FGLP---------CTYVGHPL--------ADEIPLLP---------DREAAREKL 182 (381)
T ss_pred HHHhhHeeeecCCCH-HHHHh----cCCC---------eEEeCChh--------hhhccccc---------cHHHHHHHh
Confidence 2 2455443222222 12210 1111 22444421 12111111 112355566
Q ss_pred ----CCCeEEEEe--ccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003999 332 ----DGKKLILGI--DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (780)
Q Consensus 332 ----~~~~vil~V--drld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g 405 (780)
..+.+.+-- -|-+..+-.+..++|++++.+++|+++ ++.=..+ ..++.++.+ ..+.-.. +
T Consensus 183 ~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~~--~ 248 (381)
T COG0763 183 GIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEVA--G 248 (381)
T ss_pred CCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhcccc--C
Confidence 234444333 345667778888899999999999988 4432211 333333222 2111100 0
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc------
Q 003999 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS------ 479 (780)
Q Consensus 406 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S------ 479 (780)
..++ +...+....+.+||+.+..| |.+.+|++.|+.+ .|++
T Consensus 249 ----~~~~-----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P-------------------~Vv~Yk~~~i 295 (381)
T COG0763 249 ----LSLI-----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP-------------------MVVAYKVKPI 295 (381)
T ss_pred ----ceEE-----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC-------------------EEEEEeccHH
Confidence 0122 23457788999999999998 8999999999753 3332
Q ss_pred -----------CCCCccccCCCcEEEC-----CCCHHHHHHHHHHHHcCCHH--HHHHHHHHHhhHhhhCCHHHHHHHH
Q 003999 480 -----------EFIGCSPSLSGAIRVN-----PWDIDAVADAMTLAINMRDS--EKQLRHEKHYRYVSTHDVAYWARSF 540 (780)
Q Consensus 480 -----------e~~G~~~~l~~al~Vn-----P~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~V~~~~~~~Wa~~~ 540 (780)
.+++....+-|..+|+ --.++.+|.++...+..+.. +..+....+++++.+..+..=+...
T Consensus 296 t~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~ 374 (381)
T COG0763 296 TYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQA 374 (381)
T ss_pred HHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 2333333332222121 12478999999999988732 2233445566666665344433333
No 159
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.57 E-value=0.0038 Score=56.42 Aligned_cols=48 Identities=21% Similarity=0.376 Sum_probs=34.8
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
|++|+||||.. ..++-+.+.++|++|++. |.+|+++|-.+...-+++.
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s~~~~~ 48 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRER-GKPVVFLTNNSSRSREEYA 48 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-HHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHH
Confidence 68999999997 234667889999999995 8999999766544433333
No 160
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.55 E-value=0.025 Score=59.19 Aligned_cols=62 Identities=16% Similarity=0.271 Sum_probs=46.1
Q ss_pred cCCHHHHHHHHHhccCceEEeCCCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHhc
Q 003999 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVPETSI-------------------------------IKSPGPEVISVLKTLC 624 (780)
Q Consensus 576 ~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~-------------------------------~~~ps~~~~~~L~~L~ 624 (780)
=+++++|.++-...+...|.+|+|||+++.++. ...|-+.+++.|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 357888888754444569999999999963220 0113345899999998
Q ss_pred cCCCCEEEEEcCCC
Q 003999 625 SDPNNTVFIVSGRG 638 (780)
Q Consensus 625 ~d~g~~V~IvSGR~ 638 (780)
++ |++++++|||+
T Consensus 128 ~~-G~~I~iVTnR~ 140 (237)
T PRK11009 128 KR-GDSIYFITGRT 140 (237)
T ss_pred HC-CCeEEEEeCCC
Confidence 85 99999999996
No 161
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.50 E-value=0.03 Score=55.53 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=45.3
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCC-hhhHHHHhcc
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG-RSSLSEWLAP 648 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~f~~ 648 (780)
+...+++++|+||||+... ...+.+.+.++|+.|.+. |.+++|+|+.+ ...+..++..
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEELKAA-GRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred HCCCCEEEEecCCccccCC--CCCcChhHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHH
Confidence 3567999999999999843 235778899999999984 89999999998 4555555443
No 162
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.35 E-value=0.017 Score=55.52 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=41.9
Q ss_pred HhccCceEEeCCCCCCCCCCC---CC----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 587 RKTERRAIFLDYDGTVVPETS---II----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~---~~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.++.||+++|.||||++-.- .+ +...-.-=--|+.|.+ .|++|.|+|||.-.-+++..+.+
T Consensus 4 ra~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 4 RAKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 345689999999999998320 11 1111111123445555 49999999999999999988765
No 163
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.32 E-value=0.02 Score=55.18 Aligned_cols=47 Identities=30% Similarity=0.382 Sum_probs=37.5
Q ss_pred ceEEeCCCCCCCCCCCCC-------CCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 592 RAIFLDYDGTVVPETSII-------KSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~-------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
++++||+||||++..+.. .++-+.+.++|+.|.+. |.+++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCCc
Confidence 378999999999965311 23567889999999985 999999998763
No 164
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.19 E-value=0.03 Score=58.11 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=44.9
Q ss_pred cCceEEeCCCCCCCCCCC-----------------------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh---HH
Q 003999 590 ERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS---LS 643 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~-----------------------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~ 643 (780)
++-+++||+|-|+++..+ ...++-+.++++++.|.+. |+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~-G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL-GIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 467999999999998531 1234558999999999995 99999999999765 55
Q ss_pred HHhcc
Q 003999 644 EWLAP 648 (780)
Q Consensus 644 ~~f~~ 648 (780)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55543
No 165
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=95.19 E-value=0.35 Score=53.02 Aligned_cols=189 Identities=17% Similarity=0.191 Sum_probs=108.6
Q ss_pred CCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc--------
Q 003999 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-------- 648 (780)
Q Consensus 577 l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-------- 648 (780)
|++.+|..--+..+-+||-||=|+||.+.+ ..-.++..++.-|-+|-+. |+.|.|||.=++....++...
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~LL~~-gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKLLRR-GVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHHHhc-CCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 355555544344477899999999999965 2334556677666666663 899999999888765444322
Q ss_pred -----C-----CCc-eEEecCccEEeeCCC----------CceEecCCCcChhHHH-HHHHHHHH-------HHhc--CC
Q 003999 649 -----C-----EML-GIAAEHGYFIRWNKT----------SEWETNHLGADLEWKK-IVEPVMRS-------YTEA--TD 697 (780)
Q Consensus 649 -----l-----~~l-gliaenG~~ir~~~~----------~~w~~~~~~~d~~wk~-~v~~i~~~-------~~e~--t~ 697 (780)
+ .++ -+.+|.-++++...+ .+|.. +.+ ..|.+ .+..+++. ..++ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~--~~m-~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL--PEM-KTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC--ccc-cCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 122 345666677776543 24542 111 23543 34444432 2221 34
Q ss_pred CceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC------CCeEEEEc--CeEEEEEeCCCCHHHHHHHHHHHc
Q 003999 698 GSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN------EPAVVKRG--QHIVEVKPQVLRPSSISVSLSLSV 769 (780)
Q Consensus 698 gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~------~~v~v~~g--~~~vEI~p~gvsKG~al~~Ll~~l 769 (780)
..|-.|+-++-.-- .....+...|.+|+.-.++..+.. .|+....| .-||||- +|..+++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIG----dKs~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIG----DKSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcC----CcHHhHHHHHHHH
Confidence 45555655443321 111112223455554444443332 35555543 4578884 8999999999999
Q ss_pred ----CCCCCcc
Q 003999 770 ----CVRARAC 776 (780)
Q Consensus 770 ----~i~~~~~ 776 (780)
+|.+.+|
T Consensus 362 ~~~~~i~~~~t 372 (408)
T PF06437_consen 362 DPEGGIKPSET 372 (408)
T ss_pred HhccCCCccce
Confidence 8998876
No 166
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.12 E-value=0.032 Score=60.30 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=47.0
Q ss_pred cCceEEeCCCCCCCCCCCC---------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~---------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+++++|+||||...... +..+.+.+.++|++|.+. |.+++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHHHHHH
Confidence 4579999999999974421 346778999999999985 999999999999887665543
No 167
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.00 E-value=2.7 Score=47.01 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=131.5
Q ss_pred HcCCCCCEEEEeCCcc--chHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 194 VINPDDDCVWVHDYHL--MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 194 ~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
..+| |+|..=||.= +-+...+|++.+..|+.++. +|.+|.==++|-..++... |.+--- +.+-..|.+
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~--D~ll~i-fPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYV--DHLLVI-FPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHH--hheeEC-CcccHHHHh
Confidence 3356 8888888863 36778999998888787654 3445433345555554433 332211 111122322
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEE--EEecccc-cc
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLI--LGIDDMD-IF 346 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vi--l~Vdrld-~~ 346 (780)
+.| +-..|-|+.. +|.- .. .+. ....++.+ +++++| |-=+|-. ..
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~~--~~---~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDEV--KP---EPD----RAEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhhh--cc---CCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1233444431 1211 10 011 11222332 344432 2245554 55
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
+.++..++|.+++.+++|+++ ++....+. .. ...+.+..... +. + .++..+ ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~----~~-~-~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEY----PP-D-VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhh----CC-C-CeEEEc-----CCchHH
Confidence 566889999999999999987 55433221 11 11233332222 11 1 123322 245777
Q ss_pred HHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCC-----cEEECCCCHHH
Q 003999 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG-----AIRVNPWDIDA 501 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----al~VnP~d~~~ 501 (780)
.++.||+.+++| |.+.+|++..+.+.-..=+..-... -=...+|-..+.|....+-| -++-+-.+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~--~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY--FIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH--HHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 8999999998753100000000000 00011222556666655532 24555678999
Q ss_pred HHHHHHHHHcCCHH
Q 003999 502 VADAMTLAINMRDS 515 (780)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (780)
+++++...|..++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999987754
No 168
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=94.95 E-value=0.08 Score=51.09 Aligned_cols=99 Identities=14% Similarity=0.264 Sum_probs=50.6
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH-----HHHHh-hhcCCEEEeec
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD-----EILRG-LLNCDLIGFHT 262 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~-----eil~~-ll~~Dligf~t 262 (780)
.++++..++ |+|++|.++...+...... +.++.+++|.+++.........+.. .+.+. .-.+|.+-..+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334444465 8999999887765443322 8899999999874211111111111 11112 24578887777
Q ss_pred HHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhh
Q 003999 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLE 312 (780)
Q Consensus 263 ~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~ 312 (780)
..-++.+.+ .|+. ..+|.++|+|||.++|+
T Consensus 148 ~~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 765555543 2321 23689999999999884
No 169
>PTZ00445 p36-lilke protein; Provisional
Probab=94.83 E-value=0.048 Score=55.40 Aligned_cols=62 Identities=24% Similarity=0.252 Sum_probs=48.8
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCC---CCC---------CCCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS---IIK---------SPGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~---~~~---------~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
..+.++..+++.+.|+|++|+|-||++..+ .+. .++++++..+.+|.+. |+.|+|||=-+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~-~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS-NIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC-CCeEEEEEccchh
Confidence 456677888899999999999999998321 112 2689999999999984 9999999855543
No 170
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=94.61 E-value=8.1 Score=42.88 Aligned_cols=248 Identities=17% Similarity=0.099 Sum_probs=124.9
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhc--CCEEEeecHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLN--CDLIGFHTFDYARHF 269 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~--~Dligf~t~~y~~~F 269 (780)
.+..+| |+|.||.=-.-.+..-+-....++||++. |-=-=+.|. .-|.-+|+.|-+.. ||+----|..+.++.
T Consensus 63 ~~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~~t~~~~~~L 137 (346)
T PF02350_consen 63 LEREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFAPTEEARERL 137 (346)
T ss_dssp HHHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEESSHHHHHHH
T ss_pred HHhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhccCCHHHHHHH
Confidence 344577 89999987766666655555668887643 211001111 12455666666553 788777788888777
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecccccc---
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF--- 346 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~--- 346 (780)
++ +|.+.. + +. .+-.+++|.-........+.. ....+.....++.+++..-|....
T Consensus 138 ~~-----~G~~~~--r----I~--------~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~~t~~~~~ 196 (346)
T PF02350_consen 138 LQ-----EGEPPE--R----IF--------VVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHPVTNEDNP 196 (346)
T ss_dssp HH-----TT--GG--G----EE--------E---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-CCCCTHH
T ss_pred Hh-----cCCCCC--e----EE--------EEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCcchhcCCh
Confidence 75 344221 1 11 122346664432221111110 011222223344455555444433
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
......+.+++.+.+. +++. +|....++ + .....+.+...++ ..|+++ .+++..++.+
T Consensus 197 ~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~~---------~~v~~~-~~l~~~~~l~ 254 (346)
T PF02350_consen 197 ERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKKY---------DNVRLI-EPLGYEEYLS 254 (346)
T ss_dssp --HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEEEE-----HHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhccc---------CCEEEE-CCCCHHHHHH
Confidence 3466777788888776 5543 44443222 1 1222232222221 136655 4889999999
Q ss_pred HHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC---CCcEEECCCCHHHHH
Q 003999 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWDIDAVA 503 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~VnP~d~~~~A 503 (780)
+++.|+++|-.|- | +..||..++. |+|.=...|-.++. ...++|. .|.+++.
T Consensus 255 ll~~a~~vvgdSs--G---I~eEa~~lg~-------------------P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~ 309 (346)
T PF02350_consen 255 LLKNADLVVGDSS--G---IQEEAPSLGK-------------------PVVNIRDSGERQEGRERGSNVLVG-TDPEAII 309 (346)
T ss_dssp HHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSEEEET-SSHHHHH
T ss_pred HHhcceEEEEcCc--c---HHHHHHHhCC-------------------eEEEecCCCCCHHHHhhcceEEeC-CCHHHHH
Confidence 9999999987762 2 3349999874 44443444555544 2456665 7999999
Q ss_pred HHHHHHHcC
Q 003999 504 DAMTLAINM 512 (780)
Q Consensus 504 ~ai~~aL~m 512 (780)
+||.+++..
T Consensus 310 ~ai~~~l~~ 318 (346)
T PF02350_consen 310 QAIEKALSD 318 (346)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHHhC
Confidence 999999975
No 171
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.53 E-value=0.026 Score=56.15 Aligned_cols=47 Identities=28% Similarity=0.320 Sum_probs=36.7
Q ss_pred ceEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 592 RAIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
+++|+|.||||+..... +..+-+.+.++|++|++. |.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 79999999999952211 223457899999999984 999999998763
No 172
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.40 E-value=0.031 Score=59.47 Aligned_cols=59 Identities=25% Similarity=0.322 Sum_probs=43.2
Q ss_pred ccCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH--
Q 003999 589 TERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS-- 643 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~-- 643 (780)
.+..+|++|+|+|+++..+. ...+-+.+.+.|+.|.+. |..++|+|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEEEEeCCCcchHHHH
Confidence 45679999999999875421 112346788999999885 9999999999855433
Q ss_pred -HHhcc
Q 003999 644 -EWLAP 648 (780)
Q Consensus 644 -~~f~~ 648 (780)
.++..
T Consensus 152 ~~~Lkk 157 (266)
T TIGR01533 152 LKNLKR 157 (266)
T ss_pred HHHHHH
Confidence 55543
No 173
>PRK06769 hypothetical protein; Validated
Probab=94.39 E-value=0.032 Score=55.46 Aligned_cols=50 Identities=28% Similarity=0.353 Sum_probs=39.5
Q ss_pred ccCceEEeCCCCCCCCCCCC----CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 589 TERRAIFLDYDGTVVPETSI----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
+..|+|++|.||||.++... .-.+-+.+.++|++|++. |.+++|+|+.+.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~~ 55 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQPG 55 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCch
Confidence 45789999999999875331 223458899999999985 999999998763
No 174
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.37 E-value=1.8 Score=47.03 Aligned_cols=168 Identities=15% Similarity=0.205 Sum_probs=106.9
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhC---CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
...++++--...+-..+.-+|.|.+..-++. +.---++ |++|+ |.||..+.+.++|++. +|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHHh-----------cc
Confidence 4578888888999999999999998442211 1000122 33344 4677777777776654 45
Q ss_pred ccEEEecCCCCHHHHHHHHHhcce--eeeccCCcCCCcch--hhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAEC--CIVNAVRDGMNLVP--YKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv--~vvtS~rEGmnLv~--~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.|.+.+--+.-++.+.++..||. |+=||. -|.-|+. ....-|+ -|+++-.|- |-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg-------------------lPvcA~~fk-cl 376 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG-------------------LPVCAVNFK-CL 376 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC-------------------Cceeeecch-hH
Confidence 668777767888999999999995 455553 4555543 3444453 355555565 44
Q ss_pred ccC----CCcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 486 PSL----SGAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 486 ~~l----~~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
.+| .+|++++ |.+++|+.|..+.+. +..+- .+.++.+.+..-.+|..+--+.
T Consensus 377 ~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l----~~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 377 DELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADEL----NQLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHH----HHHHHhhHHHHhhhHHHHHHHh
Confidence 444 2599998 899999999999972 22221 1334444445557777765443
No 175
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.19 E-value=0.061 Score=56.28 Aligned_cols=50 Identities=24% Similarity=0.359 Sum_probs=40.7
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
++||+||||++ ... +-+.+.++|+.|.+. |.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 333 344889999999884 89999997 9999988777765
No 176
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.17 E-value=0.041 Score=54.02 Aligned_cols=43 Identities=30% Similarity=0.431 Sum_probs=31.4
Q ss_pred ceEEeCCCCCCCCCCCCCC--------C-CCHHHHHHHHHhccCCCCEEEEEc
Q 003999 592 RAIFLDYDGTVVPETSIIK--------S-PGPEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~--------~-ps~~~~~~L~~L~~d~g~~V~IvS 635 (780)
|+.+||+||||+...+... . ..+.+.++|++|.++ |..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEe
Confidence 5889999999987543211 1 235799999999885 99999998
No 177
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.10 E-value=0.61 Score=52.74 Aligned_cols=138 Identities=11% Similarity=0.068 Sum_probs=80.4
Q ss_pred eEEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhh---------cc
Q 003999 335 KLILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE---------VY 404 (780)
Q Consensus 335 ~vil~Vdr-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~---------~~ 404 (780)
.++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 45666777 56667889999999998655 5543 55444332 2333333332211 0100 00
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc
Q 003999 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC 484 (780)
Q Consensus 405 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (780)
.. .++.++. ...+..++|+.||++|..| |-+..|+++++. |.|+--+-+-
T Consensus 277 ~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-------------------P~Ilip~~~~ 326 (396)
T TIGR03492 277 QK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-------------------PVIQLPGKGP 326 (396)
T ss_pred cc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-------------------CEEEEeCCCC
Confidence 00 0122221 2357889999999999886 456699999975 3333221111
Q ss_pred ------ccc---C-CCcEEECCCCHHHHHHHHHHHHcCC
Q 003999 485 ------SPS---L-SGAIRVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 485 ------~~~---l-~~al~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.+. + .+++.+...+++.+++++.++|+++
T Consensus 327 q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 327 QFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 011 1 3466666678899999999999864
No 178
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.07 E-value=0.06 Score=55.23 Aligned_cols=37 Identities=16% Similarity=0.004 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|++. |.+++|+||.....++.+...+
T Consensus 86 ~~~g~~~~l~~l~~~-g~~~~IvS~~~~~~~~~~l~~~ 122 (219)
T TIGR00338 86 LTEGAEELVKTLKEK-GYKVAVISGGFDLFAEHVKDKL 122 (219)
T ss_pred cCCCHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHc
Confidence 346778899999884 8999999999888887777654
No 179
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.06 E-value=0.043 Score=54.81 Aligned_cols=47 Identities=26% Similarity=0.354 Sum_probs=36.9
Q ss_pred CceEEeCCCCCCCCCCCC------CCCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 591 RRAIFLDYDGTVVPETSI------IKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
.|+++||.||||+..... ...+-+.+.++|++|++. |..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 589999999999764311 123457889999999984 89999999876
No 180
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.92 E-value=0.09 Score=51.94 Aligned_cols=49 Identities=29% Similarity=0.356 Sum_probs=40.6
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCC-EEEEEcCC
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNN-TVFIVSGR 637 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~-~V~IvSGR 637 (780)
++...|.|+||.|.||++. ....++++..+.++++++.-+. .|+|+|-.
T Consensus 37 k~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred hhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 5678999999999999974 4567889999999999986332 69999876
No 181
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.88 E-value=1.5 Score=50.22 Aligned_cols=106 Identities=19% Similarity=0.262 Sum_probs=62.9
Q ss_pred HHHc---CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhcc
Q 003999 328 EKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY 404 (780)
Q Consensus 328 r~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~ 404 (780)
|++| .|..++.+..++ .|=-+..+..+.++|++-|+-+ |++...|. .+. +.+.+.+++ .
T Consensus 276 R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~------~~l~~~~~~----~ 337 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE------ARLRRRFAA----H 337 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH------HHHHHHHHH----T
T ss_pred HHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH------HHHHHHHHH----c
Confidence 4555 355555556666 5667899999999999999866 76665443 111 223333322 2
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 405 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
|- +-..|+|.. ..+.+|..+.|+.+|||+-|..+-| +.+.+||+.+|
T Consensus 338 Gv-~~~Ri~f~~-~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmG 384 (468)
T PF13844_consen 338 GV-DPDRIIFSP-VAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMG 384 (468)
T ss_dssp TS--GGGEEEEE----HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT
T ss_pred CC-ChhhEEEcC-CCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcC
Confidence 43 223577654 6688899999999999999987766 56788999986
No 182
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.80 E-value=0.079 Score=55.57 Aligned_cols=54 Identities=20% Similarity=0.350 Sum_probs=41.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH--HHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS--EWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~--~~f~~ 648 (780)
+.+++++|+||||... ..+-+.+.++|++|++. |.+++|+|..++.... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~~----~~~~pga~e~L~~L~~~-G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG----NHTYPGAVQNLNKIIAQ-GKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEecccccccC----CccCccHHHHHHHHHHC-CCEEEEEeCCCCChHHHHHHHHH
Confidence 3579999999999973 34678999999999985 9999999887665433 44443
No 183
>PLN02954 phosphoserine phosphatase
Probab=93.75 E-value=0.051 Score=55.95 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-+.+.++|+.|++. |.+++|+||.....++..+..+
T Consensus 86 ~pg~~e~l~~l~~~-g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 86 SPGIPELVKKLRAR-GTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CccHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHh
Confidence 36677888998884 9999999999999998877754
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=93.68 E-value=0.08 Score=61.63 Aligned_cols=50 Identities=26% Similarity=0.273 Sum_probs=38.7
Q ss_pred ccCceEEeCCCCCCCCCCCC--------CC-CCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 589 TERRAIFLDYDGTVVPETSI--------IK-SPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~--------~~-~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
.+.|+++||+||||....+. +. .+-+.+.+.|++|.++ |.+++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCcc
Confidence 45799999999999964321 11 1357899999999995 999999998655
No 185
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=93.57 E-value=0.1 Score=53.75 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|++ .|++++|+||.....++.++..+
T Consensus 76 ~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 76 REGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 4566788888887 49999999999999988888763
No 186
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=93.52 E-value=0.1 Score=55.84 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=29.7
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. |++++|+|+.....+...+..+
T Consensus 145 pg~~e~L~~L~~~-gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 145 PGVADLLAQLRSR-SLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred CCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 5677888999884 8999999999999998888764
No 187
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.44 E-value=0.079 Score=56.05 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=39.5
Q ss_pred cCceEEeCCCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 590 ERRAIFLDYDGTVVPETS-----------------I-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~-----------------~-------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
.+-+++||+|+|+++..+ . ..++-+.+++.++.|.+. |.+|+++|||+-..
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~-G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL-GFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC-CCEEEEEeCCchhH
Confidence 356999999999995321 0 233457899999999984 99999999998654
No 188
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=93.35 E-value=0.19 Score=55.13 Aligned_cols=37 Identities=16% Similarity=-0.053 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|++. |.+++|+||......+.....+
T Consensus 182 l~pGa~elL~~Lk~~-G~~~aIvSgg~~~~~~~l~~~L 218 (322)
T PRK11133 182 LMPGLTELVLKLQAL-GWKVAIASGGFTYFADYLRDKL 218 (322)
T ss_pred CChhHHHHHHHHHHc-CCEEEEEECCcchhHHHHHHHc
Confidence 456677888999884 9999999998876666665544
No 189
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=93.25 E-value=0.17 Score=50.85 Aligned_cols=35 Identities=14% Similarity=-0.042 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.|.+. |..++|+||.....++.++..+
T Consensus 83 ~g~~e~l~~l~~~-g~~~~IvS~~~~~~~~~~l~~~ 117 (201)
T TIGR01491 83 DYAEELVRWLKEK-GLKTAIVSGGIMCLAKKVAEKL 117 (201)
T ss_pred ccHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHh
Confidence 4556788888884 9999999999999888887654
No 190
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.10 E-value=0.12 Score=50.82 Aligned_cols=35 Identities=17% Similarity=0.044 Sum_probs=29.3
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.+.+. |..++|+||.....++.++..+
T Consensus 76 ~g~~~~l~~l~~~-g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 76 PGARELISWLKER-GIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred cCHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHc
Confidence 5677888888874 8999999999999998888754
No 191
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=92.86 E-value=0.14 Score=51.07 Aligned_cols=58 Identities=28% Similarity=0.163 Sum_probs=44.1
Q ss_pred CceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCC-ChhhHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWL 646 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~f 646 (780)
.||++||+|+||.++.-+ ...+-+.+.++|+.|.+ .|.+++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 489999999999875310 01234789999999998 49999999998 777777666
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 81 ~~~ 83 (174)
T TIGR01685 81 GTF 83 (174)
T ss_pred HhC
Confidence 543
No 192
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.59 E-value=0.11 Score=51.09 Aligned_cols=45 Identities=24% Similarity=0.337 Sum_probs=35.3
Q ss_pred ceEEeCCCCCCCCCCCCC--------CCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 592 RAIFLDYDGTVVPETSII--------KSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~--------~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
++++||.||||....+.. ..+-+.+.++|++|.+. |.+++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 689999999998743211 13447799999999984 8999999985
No 193
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=92.31 E-value=0.098 Score=51.89 Aligned_cols=58 Identities=12% Similarity=0.031 Sum_probs=44.6
Q ss_pred CceEEeCCCCCCCCCCC---C----CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETS---I----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~---~----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.|+++||+||||++-+- . .+..+..--..++.|.+ .|..++|+|+++...+...+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 68999999999998530 0 12234445567778887 49999999999999999988765
No 194
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=91.67 E-value=0.2 Score=51.28 Aligned_cols=35 Identities=26% Similarity=0.196 Sum_probs=28.7
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |..++|+||.....+...+..+
T Consensus 85 ~g~~~~l~~L~~~-g~~~~i~S~~~~~~~~~~l~~~ 119 (214)
T PRK13288 85 ETVYETLKTLKKQ-GYKLGIVTTKMRDTVEMGLKLT 119 (214)
T ss_pred cCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 4567889999884 8999999999998888777654
No 195
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=91.65 E-value=0.31 Score=53.47 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=46.6
Q ss_pred CceEEeCCCCCCCCCC--CC-----C-CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPET--SI-----I-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~--~~-----~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.|+|++|+|+||.... .. . ..+-+.+.++|++|.+ .|+.++|+|..+...+.+.|..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 6899999999998743 10 1 1244789999999998 4999999999999999988876
No 196
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.54 E-value=0.19 Score=55.64 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=37.9
Q ss_pred cCceEEeCCCCCCCCCCC--------CCCCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 590 ERRAIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~--------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
+++++|+|.||||....+ ....+-+.+.++|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998432 123556889999999987 49999999985
No 197
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=91.48 E-value=0.26 Score=50.65 Aligned_cols=36 Identities=8% Similarity=0.039 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|.+. |++++|+||.....++.++..+
T Consensus 72 ~pg~~e~l~~l~~~-g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 72 REGFREFVAFINEH-GIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred cccHHHHHHHHHHC-CCeEEEECCCcHHHHHHHHHhh
Confidence 35666888888874 9999999999999888887654
No 198
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=90.75 E-value=0.31 Score=48.28 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=26.3
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|.+ .|..++|+|+.....++.++...
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 109 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGI 109 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHc
Confidence 3456677777776 47888899888888777776653
No 199
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=90.64 E-value=0.037 Score=57.73 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=50.5
Q ss_pred ccCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHH
Q 003999 589 TERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 645 (780)
-+..+|+||+|+|+++..+. ...+-+.+++.++.+.+. |..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~-G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR-GVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT-TEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC-CCeEEEEecCCchhHHHH
Confidence 45679999999999863211 112235688999999995 999999999997754433
Q ss_pred hccCCCceEEecCccEEeeCC
Q 003999 646 LAPCEMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 646 f~~l~~lgliaenG~~ir~~~ 666 (780)
...+...|+-.-.+.+++..+
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~~ 169 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPDK 169 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEES
T ss_pred HHHHHHcCCCccchhcccccc
Confidence 333333343333555666543
No 200
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=90.63 E-value=0.31 Score=46.06 Aligned_cols=68 Identities=18% Similarity=0.134 Sum_probs=40.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHH----H-HhhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI----L-RGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei----l-~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
-|+|++|+++..+++.++++. .++|+.+.+|..+.... .++...+ . ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 499999998877777777744 38999999997543221 1222222 2 2344689999999877777654
No 201
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=90.45 E-value=0.24 Score=50.16 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=27.7
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++ . .+++|+||.....++..+..+
T Consensus 71 pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 456678888887 3 789999999999998887764
No 202
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=90.43 E-value=25 Score=39.33 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=48.4
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G 490 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ 490 (780)
|. +.++++..++.++++.|+++|-.|- =++ .||.+.+. |+|. ...=.+.+. |
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~-------------------Pvv~--l~~R~e~~~~g 316 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGV-------------------PTIN--IGTRQKGRLRA 316 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCC-------------------CEEe--ecCCchhhhhc
Confidence 55 4568999999999999999884431 122 79999864 3332 122222232 3
Q ss_pred -c-EEECCCCHHHHHHHHHHHHc
Q 003999 491 -A-IRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 491 -a-l~VnP~d~~~~A~ai~~aL~ 511 (780)
. +.| +.|.+++.+++.++++
T Consensus 317 ~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 447 7799999999999654
No 203
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=90.35 E-value=0.39 Score=51.16 Aligned_cols=54 Identities=20% Similarity=0.337 Sum_probs=40.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~ 648 (780)
+.+.+++|+||||.. ..++=+...++|++|++. |.+++++|- |++..+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~~-g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKAA-GKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHHc-CCeEEEEeCCCCCCHHHHHHHHHh
Confidence 346799999999997 334567899999999995 899999864 555545555543
No 204
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=90.25 E-value=0.37 Score=46.56 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=44.4
Q ss_pred cCceEEeCCCCCCCCCC--C----CCC-----------------CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 590 ERRAIFLDYDGTVVPET--S----IIK-----------------SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~--~----~~~-----------------~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
++.++++|+||||+.-. + ... .+-+.+.+.|+.|.+ +..++|+|+.....++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 36789999999999742 1 001 123678899999974 6899999999999998888
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 754
No 205
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=90.08 E-value=0.68 Score=47.55 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=27.1
Q ss_pred HHHHHHHH-HhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 614 PEVISVLK-TLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 614 ~~~~~~L~-~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.+.|+ .+.+ .|..++|||+.....++.+...
T Consensus 97 pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~ 131 (210)
T TIGR01545 97 PLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFD 131 (210)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHh
Confidence 56777785 6666 4999999999999999888754
No 206
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=89.74 E-value=0.44 Score=48.81 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=27.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.|++. |+.++|+||.....+...+..+
T Consensus 90 ~G~~~~L~~L~~~-g~~~~ivT~~~~~~~~~~l~~~ 124 (220)
T TIGR03351 90 PGAEEAFRSLRSS-GIKVALTTGFDRDTAERLLEKL 124 (220)
T ss_pred CCHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHh
Confidence 3455778888874 8999999999999888877653
No 207
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=89.64 E-value=0.7 Score=46.60 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.+.+. |.+|+|+||.....++.+...+
T Consensus 89 ~~~~~~~l~~l~~~-g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 89 YPEARDLIRWHKAE-GHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred cHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHc
Confidence 45777888888884 8999999999998888887654
No 208
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=89.30 E-value=0.49 Score=48.66 Aligned_cols=34 Identities=15% Similarity=-0.008 Sum_probs=27.4
Q ss_pred HHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 615 EVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 615 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.++|+.|++. |.+++|+||.....++..++.+
T Consensus 96 g~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 129 (222)
T PRK10826 96 GVREALALCKAQ-GLKIGLASASPLHMLEAVLTMF 129 (222)
T ss_pred CHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHhC
Confidence 466777888874 8999999999998888877654
No 209
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.25 E-value=42 Score=37.58 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=85.3
Q ss_pred CeEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 334 KKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 334 ~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
+-+++..-|-.-. +++...+.|+.++++++|+.. +| .|...+ +.++ +.+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~-------e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVR-------ELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhh-------HHH---HHHhCCC--CcE
Confidence 4566667776655 999999999999999998865 33 233212 3222 222 1222321 236
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C-
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G- 490 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~- 490 (780)
.++. ++...+...|...|-+.+--| |=.--||-.-+. -++++=+.+.=++.+. |
T Consensus 265 ~li~-pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~------------------Pvl~lR~~TERPE~v~agt 320 (383)
T COG0381 265 KLID-PLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK------------------PVLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEeC-CcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC------------------cEEeeccCCCCccceecCc
Confidence 6665 889999999999996655444 223446555432 1344434444444443 4
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHH
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDS 515 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~ 515 (780)
.++|++ |.+.+.+++.+++++++.
T Consensus 321 ~~lvg~-~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVGT-DEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeCc-cHHHHHHHHHHHhhChHH
Confidence 456664 789999999999998753
No 210
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=89.21 E-value=0.34 Score=49.91 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 611 SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 611 ~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+...+.++.+++ .|.+|+|+||-....++.....+
T Consensus 77 ~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~~l 114 (212)
T COG0560 77 RLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAERL 114 (212)
T ss_pred cCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHHHh
Confidence 345678889999998 49999999999887777666554
No 211
>PRK08238 hypothetical protein; Validated
Probab=88.84 E-value=0.87 Score=52.72 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCc
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHG 659 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG 659 (780)
..+++++.|+++++. |.+++|+||.....++...+.+. ...+++.++
T Consensus 73 ~~pga~e~L~~lk~~-G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERAA-GRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 347899999999985 99999999999999988877653 134555554
No 212
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=88.73 E-value=0.79 Score=48.76 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=26.8
Q ss_pred HHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 615 EVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 615 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.++|+.|++. |..++|+|+.+...+...+..+
T Consensus 113 g~~e~L~~L~~~-g~~l~I~Tn~~~~~~~~~l~~~ 146 (260)
T PLN03243 113 GSREFVQALKKH-EIPIAVASTRPRRYLERAIEAV 146 (260)
T ss_pred CHHHHHHHHHHC-CCEEEEEeCcCHHHHHHHHHHc
Confidence 345678888874 8999999999998888777654
No 213
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=88.57 E-value=0.49 Score=48.47 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=28.1
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |+.++|+||.....+..++..+
T Consensus 96 ~g~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 130 (226)
T PRK13222 96 PGVKETLAALKAA-GYPLAVVTNKPTPFVAPLLEAL 130 (226)
T ss_pred CCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 4566778888774 8999999999999888888654
No 214
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=87.49 E-value=0.82 Score=50.16 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=35.8
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC---CCCEEEEEc---CCChhhHHHHh
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD---PNNTVFIVS---GRGRSSLSEWL 646 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d---~g~~V~IvS---GR~~~~L~~~f 646 (780)
.++||+||||... ..+-+...++|+.|.+. .|..++++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~g----~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG----KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC----ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5899999999972 34578889999999872 166666665 66666654444
No 215
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=86.87 E-value=0.78 Score=47.49 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. ++.++++|+.++..++..+...
T Consensus 89 pGv~~~l~~L~~~-~i~~avaS~s~~~~~~~~L~~~ 123 (221)
T COG0637 89 PGVVELLEQLKAR-GIPLAVASSSPRRAAERVLARL 123 (221)
T ss_pred ccHHHHHHHHHhc-CCcEEEecCChHHHHHHHHHHc
Confidence 5677889999985 7999999999988888877543
No 216
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=86.68 E-value=0.69 Score=47.99 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=26.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |..++|+|+.+...+...+..+
T Consensus 98 pg~~~~L~~L~~~-g~~l~i~Tn~~~~~~~~~l~~~ 132 (229)
T PRK13226 98 DGVEGMLQRLECA-GCVWGIVTNKPEYLARLILPQL 132 (229)
T ss_pred CCHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3455788888874 8999999999988777666543
No 217
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=86.65 E-value=0.93 Score=44.25 Aligned_cols=56 Identities=18% Similarity=0.375 Sum_probs=41.0
Q ss_pred eEEeCCCCCCCCCC------CC--CCCCCHHHHHHHHHhccCCCCEEEEEcCCChh---hHHHHhccC
Q 003999 593 AIFLDYDGTVVPET------SI--IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS---SLSEWLAPC 649 (780)
Q Consensus 593 lI~lD~DGTL~~~~------~~--~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~---~L~~~f~~l 649 (780)
+|++|+|||++... +. ....-+.+.++.+++.++ |.+++=+|+|+.. ....|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~-GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN-GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC-CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 48999999999842 00 113346788999999985 9999999999965 355677643
No 218
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=85.56 E-value=4.3 Score=43.58 Aligned_cols=92 Identities=11% Similarity=0.084 Sum_probs=58.0
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++ ++++.++. .+ .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~----~l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLD----ELKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHH----HHHHHHHh----CC-----CE
Confidence 367999999999988666777777653 23333 333443331 2223 33344322 11 24
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
.++ + ..+++..+++.||++|.. -|.+.+|+++|+.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 3 346899999999998874 3589999999975
No 219
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=85.43 E-value=0.68 Score=47.33 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|++. + +++|+||-....++.+...+
T Consensus 69 l~pga~ell~~lk~~-~-~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWLRER-F-QVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHHHhC-C-eEEEEeCChHHHHHHHHHHc
Confidence 456788889998884 4 99999999999888887765
No 220
>PLN02940 riboflavin kinase
Probab=84.76 E-value=1.1 Score=50.53 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=26.5
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+.+.++|+.|.+. |++++|+|+.+...+...+.
T Consensus 96 pGv~elL~~Lk~~-g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 96 PGANRLIKHLKSH-GVPMALASNSPRANIEAKIS 128 (382)
T ss_pred cCHHHHHHHHHHC-CCcEEEEeCCcHHHHHHHHH
Confidence 3455688888884 99999999999988877664
No 221
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=84.64 E-value=1.1 Score=50.11 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=28.6
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. |++++|+|++++..++..++.+
T Consensus 219 pGa~ElL~~Lk~~-GiklaIaSn~~~~~~~~~L~~l 253 (381)
T PLN02575 219 TGSQEFVNVLMNY-KIPMALVSTRPRKTLENAIGSI 253 (381)
T ss_pred cCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 3455688888885 9999999999999998888754
No 222
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=84.58 E-value=1.1 Score=44.40 Aligned_cols=58 Identities=21% Similarity=0.153 Sum_probs=36.0
Q ss_pred CceEEeCCCCCCCCCCCCCC----------------------CCCHHHHHHHHHhccCCCCEEEEEcCC-ChhhHHHHhc
Q 003999 591 RRAIFLDYDGTVVPETSIIK----------------------SPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWLA 647 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~----------------------~ps~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~f~ 647 (780)
.+||+||+|+||.+.--... ..-+.+..+|+.|.. .|++++++|=- .++...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 47999999999998531100 112678899999999 59999999954 4556666666
Q ss_pred cC
Q 003999 648 PC 649 (780)
Q Consensus 648 ~l 649 (780)
.+
T Consensus 82 ~l 83 (169)
T PF12689_consen 82 LL 83 (169)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 223
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=83.06 E-value=3.8 Score=43.64 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=45.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+|++|+|.||........-+.+.+.+.|.+|++. |..+++=|--+.+-+..-+..+
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~-g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ-GCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc-CCEEEEecCCCHHHHHHHHHHh
Confidence 3459999999999985433344679999999999995 8788888888888777766553
No 224
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=82.67 E-value=1.4 Score=43.69 Aligned_cols=58 Identities=7% Similarity=0.050 Sum_probs=38.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---Cce--EEecCccEEeeCCCCceEec
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLG--IAAEHGYFIRWNKTSEWETN 673 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lg--liaenG~~ir~~~~~~w~~~ 673 (780)
.|..++......++ ++.|+|+||-....+...|.++- .+. =|..|-.++... ..|...
T Consensus 75 dp~fKef~e~ike~-di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~d--g~h~i~ 137 (220)
T COG4359 75 DPGFKEFVEWIKEH-DIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHID--GQHSIK 137 (220)
T ss_pred CccHHHHHHHHHHc-CCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCC--Cceeee
Confidence 44555666667774 89999999999999988887652 121 234566666654 357643
No 225
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=82.59 E-value=25 Score=39.40 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=59.1
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----ccC--
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSL-- 488 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-- 488 (780)
+.+.++.. .++..||++|. +-|.| +..|++++|. |+|+--..+-. ..+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~l~~ 332 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-------------------PMVAVPQGADQPMTARRIAE 332 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-------------------CEEecCCcccHHHHHHHHHH
Confidence 44567764 56789998885 44766 6699999975 44443222211 112
Q ss_pred CC-cEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHH
Q 003999 489 SG-AIRVNP--WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWAR 538 (780)
Q Consensus 489 ~~-al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~ 538 (780)
.| |+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++
T Consensus 333 ~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 333 LGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred CCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 13 555654 56899999999999865 345555565555544 34444444
No 226
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.27 E-value=2 Score=43.63 Aligned_cols=58 Identities=16% Similarity=0.168 Sum_probs=42.4
Q ss_pred ccCceEEeCCCCCCCCCCCCCCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 589 TERRAIFLDYDGTVVPETSIIKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.++++++||+||||+...+.... .-|.+.+.|+.+.+ .-.|+|=|..+...++..+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 56789999999999974321111 13568888988887 478899898888877776653
No 227
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=81.97 E-value=14 Score=40.62 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=83.4
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 003999 335 KLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (780)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~ 414 (780)
+|+|| -.-|++-+....|+++.+.+. .+ +.++ . |- +-|...+++.++|.+.+.++ ||.. .+..
T Consensus 187 tILvG-NSgd~sNnHieaL~~L~~~~~--~~----~kIi--v-PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~i 249 (360)
T PF07429_consen 187 TILVG-NSGDPSNNHIEALEALKQQFG--DD----VKII--V-PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQI 249 (360)
T ss_pred EEEEc-CCCCCCccHHHHHHHHHHhcC--CC----eEEE--E-EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeE
Confidence 34443 446777777766666554321 12 2222 1 21 22222456666776666554 5532 3556
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCC-cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcE
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAI 492 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~r-EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al 492 (780)
++..+|.+|+.++++.+|+.++...| .|||...+ .+.+ +.++++|+-.-....+ ..++
T Consensus 250 L~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~~i 309 (360)
T PF07429_consen 250 LTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQGI 309 (360)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhCCC
Confidence 77899999999999999999999985 89997764 2333 3588898877666666 3343
Q ss_pred EE----CCCCHHHHHHHHHHHH
Q 003999 493 RV----NPWDIDAVADAMTLAI 510 (780)
Q Consensus 493 ~V----nP~d~~~~A~ai~~aL 510 (780)
.| +.-|...+++|=+++.
T Consensus 310 pVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 310 PVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred eEEeccccCCHHHHHHHHHHHh
Confidence 32 3444555555544333
No 228
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=81.94 E-value=0.98 Score=43.87 Aligned_cols=56 Identities=23% Similarity=0.267 Sum_probs=38.3
Q ss_pred ceEEeCCCCCCCCCCCCCCC----------------CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETSIIKS----------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~----------------ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++++||+||||+........ .-|.+.+.|+.|.+ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 58999999999974422110 23678888888865 5889999999988887777654
No 229
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=81.54 E-value=54 Score=36.60 Aligned_cols=86 Identities=16% Similarity=0.119 Sum_probs=55.6
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc------C---CCcE
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS------L---SGAI 492 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------l---~~al 492 (780)
+++.++|+.||++|.=| | ++++.|..++|.+ ..+|=...+--..+ + ..|+
T Consensus 244 ~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P-----------------~IliP~p~~~~~~Q~~NA~~l~~~gaa~ 302 (357)
T COG0707 244 DDMAALLAAADLVISRA---G-ALTIAELLALGVP-----------------AILVPYPPGADGHQEYNAKFLEKAGAAL 302 (357)
T ss_pred hhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCC-----------------EEEeCCCCCccchHHHHHHHHHhCCCEE
Confidence 46999999999988644 2 5788999999852 23332222200111 2 2367
Q ss_pred EECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 493 RVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 493 ~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.+.-++ .+.+++.|.++++.+ |+..+|....+.+..
T Consensus 303 ~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~~~ 340 (357)
T COG0707 303 VIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKLGK 340 (357)
T ss_pred EeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhcCC
Confidence 776666 899999999999874 455556555554433
No 230
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=81.48 E-value=0.61 Score=46.99 Aligned_cols=28 Identities=25% Similarity=0.474 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
|-+.+.++|++|.+. |..++++|+|+..
T Consensus 74 p~~gA~e~l~~L~~~-g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKLRDK-GHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHHHTS-TTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHHHHc-CCcEEEEEecCcc
Confidence 446788999999984 7778888888754
No 231
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=81.33 E-value=1.4 Score=44.08 Aligned_cols=45 Identities=29% Similarity=0.426 Sum_probs=35.4
Q ss_pred CceEEeCCCCCCCCCCC-CC-----CCCCHHHHHHHHHhccCCCCEEEEEcC
Q 003999 591 RRAIFLDYDGTVVPETS-II-----KSPGPEVISVLKTLCSDPNNTVFIVSG 636 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~-~~-----~~ps~~~~~~L~~L~~d~g~~V~IvSG 636 (780)
.++||+|-||||--..+ .. -..-+.++.+|.+|.+ .|.+++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 57999999999986443 21 2344789999999998 5999999985
No 232
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.87 E-value=3.9 Score=46.42 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=58.3
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCC-------CCC------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPET-------SII------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~-------~~~------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 644 (780)
++..++.|-.....|.++||+|+||..-. .++ ..+-.+..+.+..|.+. |+..+|+|=.......+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq-GVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ-GVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc-cEEEEEecCCchhhHHH
Confidence 56677778778889999999999998631 011 12225677888899985 99999999999999999
Q ss_pred HhccCCCceE
Q 003999 645 WLAPCEMLGI 654 (780)
Q Consensus 645 ~f~~l~~lgl 654 (780)
.|..-|.+-+
T Consensus 288 vF~khp~MiL 297 (574)
T COG3882 288 VFRKHPDMIL 297 (574)
T ss_pred HHhhCCCeEe
Confidence 9987666533
No 233
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=80.82 E-value=2.1 Score=44.71 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhcc-CCCCEEEEEcCCChhhHHHHhcc
Q 003999 612 PGPEVISVLKTLCS-DPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 612 ps~~~~~~L~~L~~-d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.++++++.+.+ ..+..++|+|--.--.++.|+..
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 45677888888843 24888999999998899998875
No 234
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=80.57 E-value=0.93 Score=48.91 Aligned_cols=27 Identities=30% Similarity=0.421 Sum_probs=21.4
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCC
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVP 604 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~ 604 (780)
+...+.++--+++.++|+||+||||++
T Consensus 27 ~~~~~~~~~~~~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 27 STARVASASASALPEALLFDCDGVLVE 53 (286)
T ss_pred hhhhhhhhccccCCcEEEEeCceeEEc
Confidence 455566665666778999999999999
No 235
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=80.42 E-value=9.6 Score=36.60 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
.-+.+...+++++ +++.|.||.|-.-+|.... ..+.+++.++++..+|+ .||++.+...+..+-.+.+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455566666655 3557789999877766655 56678999999999998 489999988887777766666
Q ss_pred cc
Q 003999 431 AE 432 (780)
Q Consensus 431 AD 432 (780)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 54
No 236
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=79.65 E-value=3.2 Score=41.85 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=21.6
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHH
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 645 (780)
-+.+.++|+.|++. |.+++|+|..+...+..+
T Consensus 86 ~~g~~e~L~~l~~~-g~~~~i~Sn~~~~~~~~~ 117 (199)
T PRK09456 86 RPEVIAIMHKLREQ-GHRVVVLSNTNRLHTTFW 117 (199)
T ss_pred CHHHHHHHHHHHhC-CCcEEEEcCCchhhHHHH
Confidence 35667777777773 777888887776554443
No 237
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=79.57 E-value=19 Score=42.00 Aligned_cols=101 Identities=18% Similarity=0.181 Sum_probs=73.1
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 003999 335 KLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (780)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~ 414 (780)
.|.++..+ ++|=.++.+.-.-++|+.-|+-. |++-+.+ +..+..+.+++++++- |. +...++|
T Consensus 431 vVf~c~~n--~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----Gv-~~eRL~f 493 (620)
T COG3914 431 VVFCCFNN--YFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----GV-DSERLRF 493 (620)
T ss_pred EEEEecCC--cccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----CC-Chhheee
Confidence 34444444 57888999999999999999854 6555532 3345667777777653 43 4556775
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
. .+.+.++-.|.|..||+++-|=-+-| ..++.|++..+
T Consensus 494 ~-p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~ 531 (620)
T COG3914 494 L-PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWMG 531 (620)
T ss_pred c-CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHhc
Confidence 5 47788899999999999998877655 57888999875
No 238
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=79.22 E-value=1.1e+02 Score=34.05 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=46.5
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc----cccC--
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC----SPSL-- 488 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~l-- 488 (780)
+.+.++.. +++..||++| .+-|+ -+..|++++|. |+|+--+.+- +..+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~Gv-------------------P~v~~P~~~dQ~~~a~~~~~ 345 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAGV-------------------PQLVVPFFGDQPFWAARVAE 345 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcCC-------------------CEEeeCCCCCcHHHHHHHHH
Confidence 44567655 4578899998 45665 56689999975 4444333331 1222
Q ss_pred CC-cEEECCC--CHHHHHHHHHHHHc
Q 003999 489 SG-AIRVNPW--DIDAVADAMTLAIN 511 (780)
Q Consensus 489 ~~-al~VnP~--d~~~~A~ai~~aL~ 511 (780)
.| |+.+++. +.+++++++.++|+
T Consensus 346 ~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 346 LGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 13 5556554 68999999999998
No 239
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.95 E-value=1 Score=44.83 Aligned_cols=22 Identities=9% Similarity=0.160 Sum_probs=16.8
Q ss_pred CHHHHHHHHHHHcCCCCCcccc
Q 003999 757 RPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~~ 778 (780)
-+-......++.+++++.+|.+
T Consensus 143 P~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CChHHHHHHHHHcCCCHHHeEE
Confidence 3456788999999998877654
No 240
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=77.90 E-value=1.4 Score=44.43 Aligned_cols=20 Identities=5% Similarity=-0.125 Sum_probs=16.1
Q ss_pred HHHHHHHHHHcCCCCCcccc
Q 003999 759 SSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 759 G~al~~Ll~~l~i~~~~~~~ 778 (780)
......+++.+++++.+|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALH 182 (203)
T ss_pred HHHHHHHHHHcCCChhHEEE
Confidence 45688899999999988743
No 241
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=77.54 E-value=3.6 Score=40.22 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=45.1
Q ss_pred hccCceEEeCCCCCCCCCCCCC------C--------------------------CCCHHHHHHHHHhccCCCCEEEEEc
Q 003999 588 KTERRAIFLDYDGTVVPETSII------K--------------------------SPGPEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~------~--------------------------~ps~~~~~~L~~L~~d~g~~V~IvS 635 (780)
++++..+++|+|.||+.-.... . .+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3577899999999999743110 0 013578899999985 58999999
Q ss_pred CCChhhHHHHhccC
Q 003999 636 GRGRSSLSEWLAPC 649 (780)
Q Consensus 636 GR~~~~L~~~f~~l 649 (780)
..+.......+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888877665
No 242
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=77.49 E-value=35 Score=38.58 Aligned_cols=73 Identities=12% Similarity=0.101 Sum_probs=50.5
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc---ccC-C----CcE-
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS---PSL-S----GAI- 492 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~---~~l-~----~al- 492 (780)
-+.-.+-+.|.+.|+||.+|+.|.+|.|..+.|. |-|.+..+|.. ++. . -||
T Consensus 492 lDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi-------------------PSvtTNlSGFGcfMeehi~d~~ayGIY 552 (692)
T KOG3742|consen 492 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-------------------PSVTTNLSGFGCFMEEHIEDPQAYGIY 552 (692)
T ss_pred CCHHHHhccccccccccccCCCCCCchheEEecc-------------------ccccccccchhhhHHHHhcCchhceEE
Confidence 3566788999999999999999999999888764 44555555532 332 2 144
Q ss_pred EEC-----C-CCHHHHHHHHHHHHcCC
Q 003999 493 RVN-----P-WDIDAVADAMTLAINMR 513 (780)
Q Consensus 493 ~Vn-----P-~d~~~~A~ai~~aL~m~ 513 (780)
+|+ | .+++++++-|..-...+
T Consensus 553 IvDRRfks~deSv~qL~~~m~~F~~qs 579 (692)
T KOG3742|consen 553 IVDRRFKSPDESVQQLASFMYEFCKQS 579 (692)
T ss_pred EEecccCChhhHHHHHHHHHHHHHHHH
Confidence 333 2 35678888888777544
No 243
>PRK11587 putative phosphatase; Provisional
Probab=77.25 E-value=1.2 Score=45.78 Aligned_cols=14 Identities=36% Similarity=0.691 Sum_probs=12.9
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.+.|+||+||||++
T Consensus 3 ~k~viFDlDGTL~D 16 (218)
T PRK11587 3 CKGFLFDLDGTLVD 16 (218)
T ss_pred CCEEEEcCCCCcCc
Confidence 47899999999999
No 244
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=76.42 E-value=4.6 Score=39.67 Aligned_cols=57 Identities=19% Similarity=0.184 Sum_probs=41.9
Q ss_pred CceEEeCCCCCCCCCCCCCC---------------------CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETSIIK---------------------SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~---------------------~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++.+++|+|+||+.-..... ..-|.+.+.|+.|.+ ...++|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999999996331110 023578899999987 3789999999988887777654
No 245
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=75.30 E-value=2.3 Score=41.93 Aligned_cols=21 Identities=10% Similarity=0.098 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHcCCCCCcccc
Q 003999 758 PSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~~ 778 (780)
+....+.+++.+++++.+|.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEE
Confidence 345678899999998877653
No 246
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.89 E-value=1.4 Score=44.42 Aligned_cols=21 Identities=10% Similarity=0.015 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHcCCCCCcccc
Q 003999 758 PSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~~ 778 (780)
+-..+..+++.+++++++|.+
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEE
Confidence 456678889999999987753
No 247
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=73.88 E-value=9.3 Score=35.59 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=30.1
Q ss_pred HHHHHHcCCCCCEEEEeCCcc-chHHHHHHHhcCCCcEEEEEeC
Q 003999 189 DKVMEVINPDDDCVWVHDYHL-MVLPTFLRKRFNRIKLGFFLHS 231 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl-~llp~~lr~~~~~~~i~~flH~ 231 (780)
.++++..+| |+||+|.... .+++.++++.....|+.++.|-
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 445556666 9999999875 5667677665555899999994
No 248
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=73.84 E-value=0.36 Score=58.24 Aligned_cols=189 Identities=20% Similarity=0.167 Sum_probs=101.9
Q ss_pred HHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC---CCCEEEEEcCCChhh----------HHHHh
Q 003999 580 DHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD---PNNTVFIVSGRGRSS----------LSEWL 646 (780)
Q Consensus 580 ~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d---~g~~V~IvSGR~~~~----------L~~~f 646 (780)
.++....-.-+.-|.++|+||||-++. ..+....++.-.+++.. ..-.-.++|||++.. ..++.
T Consensus 178 sEi~r~lp~r~eIl~gll~~~~i~f~t---~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v 254 (732)
T KOG1050|consen 178 SEIYRCLPVRKEILRGLLYDDLLGFHT---DDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFV 254 (732)
T ss_pred HHHHHhcccHHHHHHhhhccCcccccc---ccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhh
Confidence 333333333445588999999999854 23333333322222221 112366699999776 55555
Q ss_pred ccCCCceEEecCccEEeeCCC-CceEecCCCcC-----hhHHHHHHHHHHHHHh--------------cCCCceeecccc
Q 003999 647 APCEMLGIAAEHGYFIRWNKT-SEWETNHLGAD-----LEWKKIVEPVMRSYTE--------------ATDGSNIEIKES 706 (780)
Q Consensus 647 ~~l~~lgliaenG~~ir~~~~-~~w~~~~~~~d-----~~wk~~v~~i~~~~~e--------------~t~gs~iE~k~~ 706 (780)
+ +.+++.+++||-.|+...+ .......+..| ..+....++.++.|.+ +++|.-+|.-..
T Consensus 255 ~-~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~ 333 (732)
T KOG1050|consen 255 K-LLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKF 333 (732)
T ss_pred c-cccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHH
Confidence 4 3477888999998886542 21111112111 1233444455554433 123322333345
Q ss_pred eEEEeeccCCCCcccccHHHHHHHHHHHhcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHcCCCCCcc
Q 003999 707 ALVWHHQDADPDFGSCQAKELLDHLESVLANEP-AVVKRGQHIVEVKPQ-VLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 707 ~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~-v~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
++..||+..+..|+...+..+ ..+....+ .....+....|+.|. .+.||.++..+....+.....|
T Consensus 334 ~v~~~v~rIn~~f~~~~~~pV----~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~ 401 (732)
T KOG1050|consen 334 CVSVHVRRINEKFGSASYQPV----HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKS 401 (732)
T ss_pred HhHhhhhhhhhccCCcccceE----EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCC
Confidence 566666666655554321111 11111111 234456677888886 6999999999999888877444
No 249
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=73.40 E-value=1.7 Score=45.77 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=13.6
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
+.++|+||+||||++
T Consensus 21 ~~k~viFDlDGTLiD 35 (248)
T PLN02770 21 PLEAVLFDVDGTLCD 35 (248)
T ss_pred ccCEEEEcCCCccCc
Confidence 457999999999998
No 250
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=72.57 E-value=5.7 Score=40.74 Aligned_cols=21 Identities=24% Similarity=0.513 Sum_probs=17.3
Q ss_pred HhccCceEEeCCCCCCCCCCC
Q 003999 587 RKTERRAIFLDYDGTVVPETS 607 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~ 607 (780)
+.+.+.|++||+|-|++++.+
T Consensus 9 ~~~~ril~~FDFD~TIid~dS 29 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQDS 29 (256)
T ss_pred ccCCcEEEEEecCceeecCCc
Confidence 345788999999999998764
No 251
>PRK11590 hypothetical protein; Provisional
Probab=72.55 E-value=1.9 Score=44.17 Aligned_cols=15 Identities=53% Similarity=0.961 Sum_probs=13.4
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
++|+++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 568999999999995
No 252
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=72.35 E-value=2 Score=44.76 Aligned_cols=15 Identities=27% Similarity=0.330 Sum_probs=13.4
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
+.|+|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 357999999999999
No 253
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=72.07 E-value=3.5 Score=42.04 Aligned_cols=32 Identities=22% Similarity=0.342 Sum_probs=19.8
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCS 625 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~ 625 (780)
.++|+||+||||++.. .........+.+.+..
T Consensus 2 ~~~viFDlDGTL~ds~---~~~~~~~~~~~~~~~~ 33 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTS---GLAEKARRNAIEVLIE 33 (221)
T ss_pred ceEEEEeCCCCCcCCC---CccCHHHHHHHHHHHH
Confidence 4689999999999933 2233333344444444
No 254
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=72.04 E-value=2.5 Score=45.17 Aligned_cols=26 Identities=12% Similarity=0.001 Sum_probs=20.0
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|..+++.+++.+|+++.+|.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 34555677899999999999877754
No 255
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=71.73 E-value=2.8 Score=41.31 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHHcCCCCCcccc
Q 003999 757 RPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~~ 778 (780)
-+-...+..++++++++.+|.+
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEE
Confidence 3567778899999999877754
No 256
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=71.61 E-value=1.4e+02 Score=36.31 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=74.9
Q ss_pred CCCeEEEEeccccccCChHHH-H---HHHHHHHHhCCCCCC-ceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003999 332 DGKKLILGIDDMDIFKGISLK-L---LAMEQLLQQHPGMRG-KVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~-l---~A~~~ll~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~ 406 (780)
++...++.|-|+..-|=-.+. | .-+.++ ++.|+..- .+++|..|-...++ ..-.++-+.|.++++.||..-..
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d-~~gK~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGD-YMGKEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT--HHHHHHHHHHHHHHHHHCT-TTT
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHHhcChhh
Confidence 355678899999999976663 3 334454 45665432 35666544333222 22245666778888888864333
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc
Q 003999 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP 486 (780)
Q Consensus 407 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (780)
.+.-.|+|+. +..-.--..++.+|||-.-+|++ ++|| ||++ .|.-+. .|.|.+|..-|+--
T Consensus 520 ~~~lkVvFle-nYdvslA~~lipg~DVwln~p~~------p~EA--SGTS--gMK~~~--------NGaL~lstlDG~ni 580 (713)
T PF00343_consen 520 GDRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTR------PKEA--SGTS--GMKAAM--------NGALNLSTLDGWNI 580 (713)
T ss_dssp CCGEEEEEET-T-SHHHHHHHGGG-SEEEE---T------TSSS--S-SH--HHHHHH--------TT-EEEEESSTCHH
T ss_pred ccceeEEeec-CCcHHHHHHHhhhhhhhhhCCCC------Cccc--cCCC--cchhhc--------CCCeEEecccchhH
Confidence 3344688886 45666666789999999999874 4554 4332 122222 26888998888765
Q ss_pred cC
Q 003999 487 SL 488 (780)
Q Consensus 487 ~l 488 (780)
++
T Consensus 581 Ei 582 (713)
T PF00343_consen 581 EI 582 (713)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 257
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=70.60 E-value=31 Score=37.70 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=55.6
Q ss_pred CCeEEEEecc--ccccCChH---HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 333 GKKLILGIDD--MDIFKGIS---LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 333 ~~~vil~Vdr--ld~~KGi~---~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
...+.+-||- =.+.=+-. .++..+..+.+.++ .+ +. |. +||-..++ ..+.+.++.+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~~---~~~~L~~~~~~-------- 207 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPPE---AEAALRELLKD-------- 207 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcHH---HHHHHHHhhcC--------
Confidence 4555555654 22222223 56677777877765 33 43 33 34433332 22333333211
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
..-+.++.+ -+..=+.+++..||.++||. |..+++ .||+++|.
T Consensus 208 -~~~~~~~~~-~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG~ 250 (311)
T PF06258_consen 208 -NPGVYIWDG-TGENPYLGFLAAADAIVVTE--DSVSMV-SEAAATGK 250 (311)
T ss_pred -CCceEEecC-CCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCC
Confidence 112434443 23445889999999999997 777765 49999864
No 258
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=70.40 E-value=3.4 Score=43.37 Aligned_cols=14 Identities=36% Similarity=0.638 Sum_probs=12.9
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.++|+||+||||++
T Consensus 2 ~k~viFD~DGTLiD 15 (253)
T TIGR01422 2 IEAVIFDWAGTTVD 15 (253)
T ss_pred ceEEEEeCCCCeec
Confidence 47899999999999
No 259
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=70.34 E-value=3.3 Score=42.42 Aligned_cols=15 Identities=47% Similarity=0.815 Sum_probs=13.6
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
+.++|+||+||||++
T Consensus 3 ~~~~viFD~DGTL~d 17 (221)
T PRK10563 3 QIEAVFFDCDGTLVD 17 (221)
T ss_pred CCCEEEECCCCCCCC
Confidence 467999999999998
No 260
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=70.26 E-value=30 Score=34.44 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=36.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCC--CEEEEeCCccchHHHHHHHhcCCCcEEEE
Q 003999 175 VLWQAYVSANKIFADKVMEVINPDD--DCVWVHDYHLMVLPTFLRKRFNRIKLGFF 228 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~~~~~~--DiVwvhDyhl~llp~~lr~~~~~~~i~~f 228 (780)
..|+.=+.-=+..|+++.+.-+.+. |+|.-| +-+.-+-+||..+|+++++-+
T Consensus 41 ~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 41 RDFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 3455555555555565555443332 999999 778888899999999998643
No 261
>PHA02597 30.2 hypothetical protein; Provisional
Probab=70.24 E-value=2.1 Score=43.08 Aligned_cols=21 Identities=14% Similarity=0.136 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHcCCCCCcc-ccCC
Q 003999 758 PSSISVSLSLSVCVRARAC-KLDD 780 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~-~~~~ 780 (780)
|-..+..+++.++ +++| ++||
T Consensus 132 kp~~~~~a~~~~~--~~~~v~vgD 153 (197)
T PHA02597 132 KEKLFIKAKEKYG--DRVVCFVDD 153 (197)
T ss_pred cHHHHHHHHHHhC--CCcEEEeCC
Confidence 5678899999999 6666 7777
No 262
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=70.14 E-value=2.8 Score=42.76 Aligned_cols=21 Identities=5% Similarity=-0.159 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHc-CCCCCcccc
Q 003999 758 PSSISVSLSLSV-CVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l-~i~~~~~~~ 778 (780)
+....+.+++.+ ++++.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEE
Confidence 445677888888 888877654
No 263
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=69.15 E-value=2.7 Score=43.33 Aligned_cols=33 Identities=27% Similarity=0.252 Sum_probs=20.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCS 625 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~ 625 (780)
..+.|+||+||||++ ........+..+++++.-
T Consensus 3 ~~~~iiFDlDGTL~D---s~~~~~~~~~~~~~~~~~ 35 (220)
T COG0546 3 MIKAILFDLDGTLVD---SAEDILRAFNAALAELGL 35 (220)
T ss_pred CCCEEEEeCCCcccc---ChHHHHHHHHHHHHHcCC
Confidence 457999999999999 222222334444454443
No 264
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=68.72 E-value=6.2 Score=39.01 Aligned_cols=69 Identities=20% Similarity=0.229 Sum_probs=46.8
Q ss_pred cCCHHHHHHHHHhccCceEEeCCCCCCCCCCC------------------------------CCCCCCHHHHHHHHHhcc
Q 003999 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVPETS------------------------------IIKSPGPEVISVLKTLCS 625 (780)
Q Consensus 576 ~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~------------------------------~~~~ps~~~~~~L~~L~~ 625 (780)
-.++.+|..+..--+.-.+-||+|.|++=..+ ..-.++.++..-|-.+..
T Consensus 48 wiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq 127 (237)
T COG3700 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 35778888887766777888999999873211 011345555554545555
Q ss_pred CCCCEEEEEcCCChhhHHH
Q 003999 626 DPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 626 d~g~~V~IvSGR~~~~L~~ 644 (780)
..|-.|+.+|||++...+.
T Consensus 128 ~RGD~i~FvTGRt~gk~d~ 146 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDT 146 (237)
T ss_pred hcCCeEEEEecCCCCcccc
Confidence 5689999999999875543
No 265
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=68.65 E-value=2.7 Score=43.51 Aligned_cols=14 Identities=36% Similarity=0.681 Sum_probs=13.0
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.++|+||+||||++
T Consensus 10 ~k~vIFDlDGTL~d 23 (224)
T PRK14988 10 VDTVLLDMDGTLLD 23 (224)
T ss_pred CCEEEEcCCCCccc
Confidence 57999999999999
No 266
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=68.62 E-value=2e+02 Score=32.04 Aligned_cols=84 Identities=7% Similarity=-0.067 Sum_probs=49.8
Q ss_pred EEEeccc-cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEe
Q 003999 337 ILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415 (780)
Q Consensus 337 il~Vdrl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~ 415 (780)
++.=+|- +..+-++..++|.+++.+++ .++++.+.++ .+ .+++...+ +.++.++
T Consensus 172 llPGSR~~Ei~~llP~~~~aa~~L~~~~------~~~~i~~a~~------~~----~i~~~~~~---------~~~~~~~ 226 (347)
T PRK14089 172 FMPGSRKSEIKRLMPIFKELAKKLEGKE------KILVVPSFFK------GK----DLKEIYGD---------ISEFEIS 226 (347)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHhhcC------cEEEEeCCCc------HH----HHHHHHhc---------CCCcEEe
Confidence 4445553 44556677778888876543 2355443321 11 22222211 1134444
Q ss_pred cCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
. +...+|+.||+++..| |.+.+|++.++.+
T Consensus 227 ~------~~~~~m~~aDlal~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 227 Y------DTHKALLEAEFAFICS-----GTATLEAALIGTP 256 (347)
T ss_pred c------cHHHHHHhhhHHHhcC-----cHHHHHHHHhCCC
Confidence 2 3457899999999999 8889999999863
No 267
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=68.42 E-value=87 Score=34.18 Aligned_cols=111 Identities=15% Similarity=0.095 Sum_probs=71.7
Q ss_pred ccccccCChHHHHHHHHHHHHhCCCCCCceEEEE-EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 341 DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ-IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 341 drld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
-.=|++-.....|.++.+.+.. ++.++. .+.|+ + . +++.++|.+.+.+ .||.. .+..++..+
T Consensus 153 NSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-g-n---~~Yi~~V~~~~~~---lF~~~---~~~~L~e~l 215 (322)
T PRK02797 153 NSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-N-N---QAYIEEVRQAGLA---LFGAE---NFQILTEKL 215 (322)
T ss_pred CCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-C-C---HHHHHHHHHHHHH---hcCcc---cEEehhhhC
Confidence 4567887777777777665322 232322 23332 1 1 3455666666654 46632 366788999
Q ss_pred CHHHHHHHHHhcceeeeccCC-cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 420 PRFEKSAYYAVAECCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~r-EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
+.+|..++++.+|+.++.--| .|+|..++=.- . +.++++|+-.-.-..+
T Consensus 216 ~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~-~-------------------G~~v~l~r~n~fwqdl 265 (322)
T PRK02797 216 PFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQ-L-------------------GKPVVLSRDNPFWQDL 265 (322)
T ss_pred CHHHHHHHHHhCCEEEEeechhhHHhHHHHHHH-C-------------------CCcEEEecCCchHHHH
Confidence 999999999999999988764 89998765322 2 2477887665555555
No 268
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=68.12 E-value=3.9 Score=40.55 Aligned_cols=21 Identities=5% Similarity=-0.110 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHcCCCCCcccc
Q 003999 758 PSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~~ 778 (780)
+-...+.+++.+|+++.+|.+
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~ 163 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIF 163 (184)
T ss_pred CHHHHHHHHHHhCCCccceEE
Confidence 346778999999999988743
No 269
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=67.79 E-value=74 Score=32.65 Aligned_cols=141 Identities=20% Similarity=0.274 Sum_probs=70.6
Q ss_pred ccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC
Q 003999 341 DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (780)
Q Consensus 341 drld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~ 420 (780)
|..+..-||..-.+|+.+ ++++.-+-++|. .+|+|-- +-+.++.++++++-.. + .. -.|+.|+..-.
T Consensus 83 g~~~~~~~i~iA~lalkh--Rqnk~~~~riVv-FvGSpi~-------e~ekeLv~~akrlkk~-~-Va-idii~FGE~~~ 149 (259)
T KOG2884|consen 83 GKANFMTGIQIAQLALKH--RQNKNQKQRIVV-FVGSPIE-------ESEKELVKLAKRLKKN-K-VA-IDIINFGEAEN 149 (259)
T ss_pred CcccHHHHHHHHHHHHHh--hcCCCcceEEEE-EecCcch-------hhHHHHHHHHHHHHhc-C-ee-EEEEEeccccc
Confidence 344555666666666654 345554433433 3565541 2233566666666322 1 11 23666654322
Q ss_pred H-HHHHHHHHhcc-------eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--C
Q 003999 421 R-FEKSAYYAVAE-------CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--G 490 (780)
Q Consensus 421 ~-~el~aly~~AD-------v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ 490 (780)
. +-+.++..+.. +..||+- -...+++.. +|++.-|-+|+.--+. |
T Consensus 150 ~~e~l~~fida~N~~~~gshlv~Vppg-----~~L~d~l~s--------------------sPii~ge~g~a~~~~~a~g 204 (259)
T KOG2884|consen 150 NTEKLFEFIDALNGKGDGSHLVSVPPG-----PLLSDALLS--------------------SPIIQGEDGGAAAGLGANG 204 (259)
T ss_pred cHHHHHHHHHHhcCCCCCceEEEeCCC-----ccHHHHhhc--------------------CceeccCcccccccccccc
Confidence 2 34445544432 3334431 122233322 4666666555443332 1
Q ss_pred ---cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003999 491 ---AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523 (780)
Q Consensus 491 ---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (780)
.+=|+|.+--++|.||+-.+ +|.+.|.++
T Consensus 205 ~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~ 236 (259)
T KOG2884|consen 205 MDFEFGVDPEDDPELALALRLSM----EEERARQER 236 (259)
T ss_pred cccccCCCcccCHHHHHHHHhhH----HHHHHHHHH
Confidence 35688988889999887444 355555553
No 270
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=67.27 E-value=3.8 Score=40.17 Aligned_cols=20 Identities=5% Similarity=-0.072 Sum_probs=15.1
Q ss_pred HHHHHHHHHHcCCCCCcccc
Q 003999 759 SSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 759 G~al~~Ll~~l~i~~~~~~~ 778 (780)
-.....+++.+|+++.+|.|
T Consensus 142 p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEe
Confidence 44557888889999888764
No 271
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=67.14 E-value=7.6 Score=39.07 Aligned_cols=38 Identities=16% Similarity=0.269 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 611 SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 611 ~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.++.+.+....|.+. |.+|+++||-=+..+...-+.+
T Consensus 88 ~lT~Gi~eLv~~L~~~-~~~v~liSGGF~~~i~~Va~~L 125 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHAR-GTQVYLISGGFRQLIEPVAEQL 125 (227)
T ss_pred ccCCCHHHHHHHHHHc-CCeEEEEcCChHHHHHHHHHHh
Confidence 3467888999999994 9999999998887776655544
No 272
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=66.87 E-value=3.7 Score=39.28 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHcCCCCCccccCC
Q 003999 757 RPSSISVSLSLSVCVRARACKLDD 780 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~~~~ 780 (780)
.+...+.+++++++++++.+++||
T Consensus 119 p~~~~~~~~~~~~~~~~~~l~iGD 142 (154)
T TIGR01549 119 PEPEIFLAALESLGLPPEVLHVGD 142 (154)
T ss_pred cCHHHHHHHHHHcCCCCCEEEEeC
Confidence 357889999999999883345554
No 273
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=66.59 E-value=4.4 Score=42.97 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=13.1
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.++|+||+||||++
T Consensus 4 ~k~vIFDlDGTLiD 17 (267)
T PRK13478 4 IQAVIFDWAGTTVD 17 (267)
T ss_pred eEEEEEcCCCCeec
Confidence 57999999999999
No 274
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=66.13 E-value=1.7e+02 Score=30.24 Aligned_cols=158 Identities=17% Similarity=0.223 Sum_probs=85.3
Q ss_pred CCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhh
Q 003999 233 FPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLE 312 (780)
Q Consensus 233 fP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~ 312 (780)
||..++||.+- ...|++-|-.-|-|-|.|+.-+-|-|.. .|+-.+- ...++++| |++.+.+.
T Consensus 33 fpDydvfrAfT-S~kIIkkLK~rdgi~~dTP~~aL~klk~------------~gy~evi----iQ~lhiIp-G~EyEklv 94 (265)
T COG4822 33 FPDYDVFRAFT-SRKIIKKLKERDGIDFDTPIQALNKLKD------------QGYEEVI----IQPLHIIP-GIEYEKLV 94 (265)
T ss_pred CccHHHHHHHh-HHHHHHHHHhhcCcccCCHHHHHHHHHH------------ccchhee----eeeeeecC-chHHHHHH
Confidence 88889998765 4568888888999999999776555531 1210010 12456666 87776654
Q ss_pred hhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCC-hhHHHHHHH
Q 003999 313 SVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGS-GKDVQEAKK 391 (780)
Q Consensus 313 ~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~-~~~~~~l~~ 391 (780)
. .++.++..|. .+.+|.-=|.+.-.....++| +..+.|-++.+=.+|..|-.+... ...|.-
T Consensus 95 r---------~V~~~~~dF~--~lkig~PlLy~k~DYe~~v~a---ik~~~ppl~k~e~~vlmgHGt~h~s~~~Yac--- 157 (265)
T COG4822 95 R---------EVNKYSNDFK--RLKIGRPLLYYKNDYEICVEA---IKDQIPPLNKDEILVLMGHGTDHHSNAAYAC--- 157 (265)
T ss_pred H---------HHHHHhhhhh--eeecCCceeechhhHHHHHHH---HHHhcCCcCcCeEEEEEecCCCccHHHHHHH---
Confidence 2 3455555552 233333333333333444444 556789887766666667544221 122322
Q ss_pred HHHHHHHHHhhccCCCCcccEEE--ecCCCCHHHHHHHHHhcce
Q 003999 392 ETYLTAKRINEVYGSPNYEPVVL--IDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 392 ei~~lv~~In~~~g~~~~~pV~~--~~~~v~~~el~aly~~ADv 433 (780)
+..... .+ +|.||.. ..+...-+.+..+++..-+
T Consensus 158 -Ld~~~~----~~---~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 158 -LDHVLD----EY---GFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred -HHHHHH----hc---CCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 222221 11 2345443 3344455666776666553
No 275
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.67 E-value=25 Score=39.00 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=75.6
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccC---CcCC---CcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAV---RDGM---NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~---rEGm---nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.++....+.......|+.-|+.+.=+. -+|. +.-..|+++|+ |++|.+--.|.-
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~-------------------~~liT~~~~~~e 299 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG-------------------GFLITDYWKDLE 299 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC-------------------CccccccHHHHH
Confidence 4445433444777888888887765433 2333 88899999996 567665555443
Q ss_pred ccCC-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHH
Q 003999 486 PSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLER 546 (780)
Q Consensus 486 ~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~ 546 (780)
--+. |--.+--.|..++.+.|...+.-++ ||++..+.+++.|.. |+-..=+..++..+..
T Consensus 300 ~~f~pgk~~iv~~d~kdl~~~~~yll~h~~-erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 300 KFFKPGKDIIVYQDSKDLKEKLKYLLNHPD-ERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HhcCCchheEEecCHHHHHHHHHHHhcCcc-hHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 3332 3223334689999999999999775 688888888888744 6655555555555554
No 276
>COG4996 Predicted phosphatase [General function prediction only]
Probab=63.86 E-value=12 Score=35.36 Aligned_cols=56 Identities=23% Similarity=0.130 Sum_probs=37.1
Q ss_pred ceEEeCCCCCCCCCCCCC--CC-------------------CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 592 RAIFLDYDGTVVPETSII--KS-------------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~--~~-------------------ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
|+|+||.||||.++..+. .+ .-+.+++.|+.++. .|..+..+|=.-....-+-+..
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~kA~~aLra 77 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDKAIKALRA 77 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHHHHHHHHH
Confidence 589999999999865221 11 12577788888777 4777777776666555444443
No 277
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=62.93 E-value=8.6 Score=45.55 Aligned_cols=65 Identities=15% Similarity=0.249 Sum_probs=53.6
Q ss_pred HHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCC-CEEEEEcCCChhhHHHHhccC
Q 003999 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPN-NTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g-~~V~IvSGR~~~~L~~~f~~l 649 (780)
..+.....+.+++..||+++..-.....+-+.+.++|+.|++. | ++++|+||......+...+.+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~-g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA-GGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc-CCCeEEEEeCCCHHHHHHHHHHh
Confidence 4455667789999999998874334567889999999999985 8 999999999999998888765
No 278
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=62.12 E-value=70 Score=33.99 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=25.2
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCC
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP 234 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP 234 (780)
|++.--.....++..+|++.+.+.++ .||--|
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~v---VqI~~P 103 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKV---VQIQDP 103 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceE---EEeeCC
Confidence 78888889999999999999887544 455555
No 279
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=61.96 E-value=3.5e+02 Score=32.50 Aligned_cols=28 Identities=4% Similarity=0.196 Sum_probs=24.8
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
-..++++||+++++| |.+.+|++.++.+
T Consensus 482 ~~~~m~aaD~aLaaS-----GTaTLEaAL~g~P 509 (608)
T PRK01021 482 RYELMRECDCALAKC-----GTIVLETALNQTP 509 (608)
T ss_pred hHHHHHhcCeeeecC-----CHHHHHHHHhCCC
Confidence 368999999999999 8999999999753
No 280
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=61.92 E-value=13 Score=39.39 Aligned_cols=71 Identities=15% Similarity=0.207 Sum_probs=46.6
Q ss_pred CHHHHHHHHHhc-cCceEEeCCCCCCCCCCCC---------------------CC--------------------CCCHH
Q 003999 578 SIDHIVSAYRKT-ERRAIFLDYDGTVVPETSI---------------------IK--------------------SPGPE 615 (780)
Q Consensus 578 ~~~~i~~~y~~a-~~rlI~lD~DGTL~~~~~~---------------------~~--------------------~ps~~ 615 (780)
+.++|....... ..-|++||+|-||+..... .. ...+.
T Consensus 6 s~~eV~~~~~~~~~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~ 85 (252)
T PF11019_consen 6 SFHEVQDYLENADQDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESD 85 (252)
T ss_pred CHHHHHHHHHcCCCCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchh
Confidence 445554444444 7789999999999864300 00 11245
Q ss_pred HHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 616 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+-+.++.|++. |++|+..|.|+.......+..+
T Consensus 86 ~~~~i~~lq~~-~~~v~alT~~~~~~~~~t~~~L 118 (252)
T PF11019_consen 86 VPNIINSLQNK-GIPVIALTARGPNMEDWTLREL 118 (252)
T ss_pred HHHHHHHHHHC-CCcEEEEcCCChhhHHHHHHHH
Confidence 66788888884 9999999999966544444433
No 281
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=60.93 E-value=4.9 Score=40.64 Aligned_cols=20 Identities=10% Similarity=-0.079 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHcCCCCCccc
Q 003999 758 PSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~ 777 (780)
|...++.+++.+++++.+|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAV 152 (205)
T ss_pred ChHHHHHHHHHcCCChhheE
Confidence 45677788888888776654
No 282
>PRK09449 dUMP phosphatase; Provisional
Probab=59.83 E-value=4.7 Score=41.26 Aligned_cols=14 Identities=29% Similarity=0.287 Sum_probs=12.8
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.++|+||+||||++
T Consensus 3 ~k~iiFDlDGTLid 16 (224)
T PRK09449 3 YDWILFDADETLFH 16 (224)
T ss_pred ccEEEEcCCCchhc
Confidence 57899999999997
No 283
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=59.67 E-value=14 Score=44.71 Aligned_cols=69 Identities=10% Similarity=0.087 Sum_probs=56.0
Q ss_pred HHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 580 DHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 580 ~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++....+.+...|.+++-+|++++..-.....+-+++.+++++|++. |++++++||............+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~-Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM-GIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHc
Confidence 44455666677788888889988764434567889999999999995 9999999999999998888765
No 284
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=57.86 E-value=12 Score=44.41 Aligned_cols=61 Identities=11% Similarity=0.198 Sum_probs=50.8
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+...+.++++.||+++..-....++.+++.++|++|++. |.+++++||......+...+.+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~-Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR-GIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHc
Confidence 455688999999998764333566889999999999985 9999999999999999888765
No 285
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=57.59 E-value=6.2 Score=39.88 Aligned_cols=21 Identities=5% Similarity=-0.103 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHcCCCCCcccc
Q 003999 758 PSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~~ 778 (780)
+..++..+++.+++++.+|.+
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEE
Confidence 456889999999999877653
No 286
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=57.49 E-value=5.4 Score=39.98 Aligned_cols=13 Identities=31% Similarity=0.542 Sum_probs=0.0
Q ss_pred ceEEeCCCCCCCC
Q 003999 592 RAIFLDYDGTVVP 604 (780)
Q Consensus 592 rlI~lD~DGTL~~ 604 (780)
++|+||+||||++
T Consensus 2 k~viFD~dgTLiD 14 (198)
T TIGR01428 2 KALVFDVYGTLFD 14 (198)
T ss_pred cEEEEeCCCcCcc
No 287
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=56.05 E-value=9.1 Score=39.83 Aligned_cols=53 Identities=25% Similarity=0.460 Sum_probs=41.1
Q ss_pred hccCceEEeCCCCCCCCCCCCC-----------------------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 588 KTERRAIFLDYDGTVVPETSII-----------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~-----------------------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
+-+..+|++|+|-|+++..+.+ ..+-+...+.|+-.-++ |.+|+.+|-|+.+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~-Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSN-GGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhc-CcEEEEEeccchhc
Confidence 3456699999999999865321 12346788899888885 99999999999876
No 288
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=55.48 E-value=68 Score=39.08 Aligned_cols=130 Identities=15% Similarity=0.080 Sum_probs=85.1
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCC-CCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHP-GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P-~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
+..+++.+-|+..-|=..+.++=.+++...-- ++..++.+|..|-...++ ..-.++.+.+...++.||.+ -.
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y-~~aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPAD-YAAKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcc-hHHHHHHHHHHHHHHhhccc------ce
Confidence 46788899999999987777666666554433 666677766555433222 22345677888888888863 24
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
|+|+.. .+-.--..++.+|||-..+|+ .++|| ||+++ |.-+++ |.|-+|..-|+-.+.
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~------a~~EA--SGTsn--MK~alN--------GaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPT------AGKEA--SGTSN--MKAALN--------GALTLGTLDGANVEI 616 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCC------CCccc--cCcCc--chHHhc--------CCceeeccccHHHHH
Confidence 888863 333344457899999877775 57786 66543 433433 678888888876554
No 289
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=55.38 E-value=5.9 Score=45.72 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=19.4
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHh
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L 623 (780)
+.|+||+||||++ ..........++++++
T Consensus 242 k~vIFDlDGTLiD---s~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 242 QALIFDMDGTLFQ---TDKILELSLDDTFDHL 270 (459)
T ss_pred hheeEccCCceec---chhHHHHHHHHHHHHH
Confidence 5899999999999 3223334455555554
No 290
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=54.22 E-value=10 Score=42.09 Aligned_cols=83 Identities=33% Similarity=0.382 Sum_probs=51.3
Q ss_pred hccCceEEeCCCCCCCCCCC--------CCCCC-CHHHHHHHHHhccCCCCEEEEEcC-----CChhh-------HHHHh
Q 003999 588 KTERRAIFLDYDGTVVPETS--------IIKSP-GPEVISVLKTLCSDPNNTVFIVSG-----RGRSS-------LSEWL 646 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~--------~~~~p-s~~~~~~L~~L~~d~g~~V~IvSG-----R~~~~-------L~~~f 646 (780)
+-..+.|.|||||||....+ .+..+ .++.-+-|..|.++ |+.++|.|- |.... +..++
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~-g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~ 150 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQD-GIKLFIFTNQNGIARGKLELEEFKKKIKAIV 150 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccC-CeEEEEEecccccccCcchHHHHHHHHHHHH
Confidence 34578999999999998543 22222 35667788889985 999999873 33322 33334
Q ss_pred ccC--CCceEEecCccEEeeCCCCceE
Q 003999 647 APC--EMLGIAAEHGYFIRWNKTSEWE 671 (780)
Q Consensus 647 ~~l--~~lgliaenG~~ir~~~~~~w~ 671 (780)
..+ |---++|..+..+|.+--+-|+
T Consensus 151 anl~vPi~~~~A~~~~~yRKP~tGMwe 177 (422)
T KOG2134|consen 151 ANLGVPIQLLAAIIKGKYRKPSTGMWE 177 (422)
T ss_pred HhcCCceEEeeeccCCcccCcchhHHH
Confidence 332 3223566666667766433444
No 291
>PRK14986 glycogen phosphorylase; Provisional
Probab=53.24 E-value=1.6e+02 Score=36.43 Aligned_cols=136 Identities=14% Similarity=0.051 Sum_probs=86.5
Q ss_pred CCeEEEEeccccccCChHH-HHHHHHHH--HHhCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 333 GKKLILGIDDMDIFKGISL-KLLAMEQL--LQQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~A~~~l--l~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+-..++.+-|+..-|=-.+ .|..++++ ++.+|+.. ..+++|..|-+..+. ..-.++-+.|..+++-||..-...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY-YMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998887777 77776665 34566532 246666555444333 2334566788888888886433334
Q ss_pred cccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
.-.|+|+. +..-.--..++.+|||..-+|+ .++|| ||+++ |.-++ .|+|-+|..-|.-.++
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~EA--SGTsn--MK~al--------NGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTEA--SGTSN--MKFAL--------NGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCccc--cCcch--hhHHh--------cCceeeeccCCchhHH
Confidence 44688886 3455555678999999877775 56775 55432 33333 2677787777765444
No 292
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=51.69 E-value=11 Score=35.66 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=38.2
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
.+.++++|+..-+ ..=+++.+.|+.|.+- +.|+|+||-.+.++.+...
T Consensus 17 ~~~~v~~tiatgG----klf~ev~e~iqeL~d~--V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIATGG----KLFSEVSETIQELHDM--VDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEccCc----EEcHhhHHHHHHHHHh--heEEEecCCcchHHHHHHH
Confidence 3568899998733 3446788888888873 8999999999999988775
No 293
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=51.37 E-value=25 Score=42.70 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=55.0
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+.+.+...|.+++-+|++++..-.....+-+++.+++++|++. |++++++||-.......+-.++
T Consensus 415 ~~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~-GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM-GIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3445566667788888889998764334567889999999999995 9999999999999999888765
No 294
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=49.90 E-value=7.8 Score=39.28 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=16.1
Q ss_pred HHHHHHHHHHcCCCCCcccc
Q 003999 759 SSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 759 G~al~~Ll~~l~i~~~~~~~ 778 (780)
......+++.+|+++++|.+
T Consensus 155 p~~~~~~~~~~g~~~~~~l~ 174 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVF 174 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEE
Confidence 45778889999999988765
No 295
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=49.60 E-value=9.5 Score=42.73 Aligned_cols=72 Identities=13% Similarity=0.225 Sum_probs=43.7
Q ss_pred hccCceEEeCCCCCCCCCCCC--------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCc
Q 003999 588 KTERRAIFLDYDGTVVPETSI--------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~--------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG 659 (780)
+...++|++|+|||++..... ..--...+..+-.++.++ |..|.-.|.|++..+..--. -+..|++||
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN-GYkI~YltsR~~Gqa~sTrs---ylrnieQng 447 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN-GYKIKYLTSRSYGQADSTRS---YLRNIEQNG 447 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC-ceEEEEEecccccchhhhhh---HHHhhhhcC
Confidence 456889999999999973210 001123444555566653 77888889999876543221 133556777
Q ss_pred cEEe
Q 003999 660 YFIR 663 (780)
Q Consensus 660 ~~ir 663 (780)
+.+-
T Consensus 448 ykLp 451 (580)
T COG5083 448 YKLP 451 (580)
T ss_pred ccCC
Confidence 6543
No 296
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=49.28 E-value=2.9e+02 Score=31.43 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=63.1
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc-------
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS------- 487 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------- 487 (780)
....+|+.+ ++..||++|-. -|+|.+ .|++..+. |+|+ +..+.++
T Consensus 288 v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gv-------------------P~vv--~P~~~DQ~~nA~rv 339 (406)
T COG1819 288 VADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGV-------------------PLVV--IPDGADQPLNAERV 339 (406)
T ss_pred EecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCC-------------------CEEE--ecCCcchhHHHHHH
Confidence 335667654 88899999854 588865 48888764 4444 2222333
Q ss_pred --CCCc--EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 488 --LSGA--IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 488 --l~~a--l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
+.-| +...+++.+.++++++++|+++. -+++.+++++....++...=+...+++
T Consensus 340 e~~G~G~~l~~~~l~~~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 340 EELGAGIALPFEELTEERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHcCCceecCcccCCHHHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 2224 44558999999999999999753 444456666767676654444444443
No 297
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=49.02 E-value=25 Score=43.22 Aligned_cols=66 Identities=5% Similarity=0.082 Sum_probs=54.2
Q ss_pred HHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 583 ~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.....+.+++=+||+++..-....++-+++.++|++|++. |++++++||........+.+.+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~-gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL-GIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHc
Confidence 34566677888999999998764334556789999999999995 9999999999999999988765
No 298
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=48.87 E-value=1.7e+02 Score=27.98 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
.+..+.++.++++ +..+.||.|...+|.. .+....+++.++++..+++ -||++++...+..+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566666766653 3367789888655543 3445667778888877775 3799999988888777777654
Q ss_pred c
Q 003999 432 E 432 (780)
Q Consensus 432 D 432 (780)
.
T Consensus 112 ~ 112 (138)
T PRK00109 112 G 112 (138)
T ss_pred C
Confidence 3
No 299
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=46.87 E-value=3.8e+02 Score=28.47 Aligned_cols=181 Identities=21% Similarity=0.261 Sum_probs=85.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh--
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-- 251 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-- 251 (780)
+..|+.-.++ .++|.+..+. .|+|-|--||-- .|+||-..-+-.+.-.-.||-.+
T Consensus 46 ~~E~erl~~~----r~~i~~~ak~-a~VitISHYHYD------------------HhtPf~~~~y~~s~e~~~eiY~gK~ 102 (304)
T COG2248 46 QRELERLRQA----REKIQRYAKK-ADVITISHYHYD------------------HHTPFFDGIYEASGETAKEIYKGKL 102 (304)
T ss_pred HHHHHHHHHH----HHHHHHHHhh-CCEEEEeeeccc------------------cCCccccchhhhcccchHHHhcCcE
Confidence 3445554432 4555555553 599999989853 58886433222222233445444
Q ss_pred hhcCC---EEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEE-EeecCCCchhhhhhcCCchhHHHHHHH
Q 003999 252 LLNCD---LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK-ILPVGVHMGRLESVLNLPATATKIKEI 327 (780)
Q Consensus 252 ll~~D---ligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~-i~P~GId~~~~~~~~~~~~~~~~~~~l 327 (780)
+|--+ -|--.-..-+..|+.....+ +.+++...| -..++++-.+... .+|.|-|=+++--++..-
T Consensus 103 lLlKhPte~IN~SQ~~Ra~~fl~~~~~~-~~~ie~ADg-k~f~fG~t~IefS~pvpHG~eGskLGyVl~v~--------- 171 (304)
T COG2248 103 LLLKHPTENINRSQRRRAYRFLESLKDI-AREIEYADG-KTFEFGGTVIEFSPPVPHGREGSKLGYVLMVA--------- 171 (304)
T ss_pred EEecCchhhhCHHHHHHHHHHHHHhhhh-cceeEecCC-ceEEeCCEEEEecCCCCCCCcccccceEEEEE---------
Confidence 11111 01111122345677665442 333332222 2345543322221 234455533333221100
Q ss_pred HHHcCCCeEEEEecccc-ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCC------CChhHHHHHHHHHHHHHHHH
Q 003999 328 EKQFDGKKLILGIDDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPAR------GSGKDVQEAKKETYLTAKRI 400 (780)
Q Consensus 328 r~~~~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r------~~~~~~~~l~~ei~~lv~~I 400 (780)
--.++..|++..+.. +.++ .|.+-+++..|+ +++|++|.. -...+.+.--+.++.++++-
T Consensus 172 --V~dg~~~i~faSDvqGp~~~-----~~l~~i~e~~P~------v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~ 238 (304)
T COG2248 172 --VTDGKSSIVFASDVQGPIND-----EALEFILEKRPD------VLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEET 238 (304)
T ss_pred --EecCCeEEEEcccccCCCcc-----HHHHHHHhcCCC------EEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhC
Confidence 014667777877776 6555 456678899888 444665542 11122333344556666655
Q ss_pred h
Q 003999 401 N 401 (780)
Q Consensus 401 n 401 (780)
|
T Consensus 239 ~ 239 (304)
T COG2248 239 N 239 (304)
T ss_pred c
Confidence 4
No 300
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=46.69 E-value=1.2e+02 Score=28.74 Aligned_cols=71 Identities=20% Similarity=0.244 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
..+.++..+.+++. +..+.||.|-..+|.. .+....+++.++++..+|+- ||.+++...+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFGV----PVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHH
Confidence 45677777777664 2356689888766554 34456788888888877763 79999988888877777765
Q ss_pred c
Q 003999 431 A 431 (780)
Q Consensus 431 A 431 (780)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 4
No 301
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=46.54 E-value=24 Score=41.60 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=50.9
Q ss_pred hccCceEEeCCCCCCCCCCCCCCC--------CCHHHHHHHHHhccCCCCEEEEEcCCChhh---HHHHhccCCCceEEe
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKS--------PGPEVISVLKTLCSDPNNTVFIVSGRGRSS---LSEWLAPCEMLGIAA 656 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~--------ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~~~f~~l~~lglia 656 (780)
+-..++|+.|+|||++....-.+. -...+..+..++.++ |.+++-+|.|.... -+.++..+...|.+-
T Consensus 527 kWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N-GYk~lyLSARaIgQA~~TR~yL~nv~QdG~~L 605 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN-GYKILYLSARAIGQADSTRQYLKNVEQDGKKL 605 (738)
T ss_pred ecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC-CeeEEEEehhhhhhhHHHHHHHHHHhhcCccC
Confidence 346789999999999873210011 124567777888885 99999999998763 344555554445555
Q ss_pred cCccEEeeCC
Q 003999 657 EHGYFIRWNK 666 (780)
Q Consensus 657 enG~~ir~~~ 666 (780)
-.|=++-.++
T Consensus 606 PdGPViLSPd 615 (738)
T KOG2116|consen 606 PDGPVILSPD 615 (738)
T ss_pred CCCCEEeCCC
Confidence 5665555443
No 302
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=46.20 E-value=3e+02 Score=34.08 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=85.4
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLL--QQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++...++.|-|+..-|=-.+ .|.-++++. +.+|+.. ..+++|..|-++.+. ..-.++-+.|..+++.||..-...
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY-YMAKLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHhccChhcC
Confidence 35678888999999887776 666655543 3466522 246666555444333 223466778888888888754444
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (780)
++-.|+|+.. ..-.--..++.+|||-.-+|+ .++|| ||+++ |.-++ .|+|.+|..-|+-.+
T Consensus 607 ~~lkVVFlen-Y~VslAe~iipaaDvseqis~------ag~EA--SGTsn--MK~~l--------NGaltlgtlDGanvE 667 (797)
T cd04300 607 DKLKVVFLPN-YNVSLAEKIIPAADLSEQIST------AGKEA--SGTGN--MKFML--------NGALTIGTLDGANVE 667 (797)
T ss_pred CceEEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCCch--hhHHh--------cCceeeecccchhHH
Confidence 5556888863 344445568999998766664 56775 55432 32232 267777777776544
Q ss_pred C
Q 003999 488 L 488 (780)
Q Consensus 488 l 488 (780)
+
T Consensus 668 i 668 (797)
T cd04300 668 I 668 (797)
T ss_pred H
Confidence 3
No 303
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=45.74 E-value=34 Score=41.44 Aligned_cols=70 Identities=9% Similarity=0.107 Sum_probs=53.5
Q ss_pred HHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 579 ~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++...+.+.+...|.++.-.|++++..-....+|-+++.+++++|++. |++++++||-........-+++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~-GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM-GIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 445555666666676665557787653334557889999999999985 9999999999999998888765
No 304
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=45.42 E-value=9 Score=37.43 Aligned_cols=12 Identities=50% Similarity=0.858 Sum_probs=0.0
Q ss_pred eEEeCCCCCCCC
Q 003999 593 AIFLDYDGTVVP 604 (780)
Q Consensus 593 lI~lD~DGTL~~ 604 (780)
.++||+||||++
T Consensus 1 ~vlFDlDgtLv~ 12 (183)
T TIGR01509 1 AILFDLDGVLVD 12 (183)
T ss_pred CeeeccCCceec
No 305
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=44.59 E-value=55 Score=29.51 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV 386 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~ 386 (780)
..|...++++++.+|+.+ +|.||..+..+.+-|
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY 81 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIY 81 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHH
Confidence 478889999999999988 777886554443334
No 306
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=42.86 E-value=13 Score=37.95 Aligned_cols=17 Identities=35% Similarity=0.514 Sum_probs=14.6
Q ss_pred cCceEEeCCCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVPET 606 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~ 606 (780)
..|.|+||+||||++..
T Consensus 3 ~~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 3 MIKAILFDLDGTLLDFD 19 (229)
T ss_pred ceeEEEEecCCcccccc
Confidence 46899999999999943
No 307
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=42.62 E-value=11 Score=37.10 Aligned_cols=11 Identities=36% Similarity=0.933 Sum_probs=0.0
Q ss_pred EEeCCCCCCCC
Q 003999 594 IFLDYDGTVVP 604 (780)
Q Consensus 594 I~lD~DGTL~~ 604 (780)
+++|+||||++
T Consensus 1 v~fD~DGTL~~ 11 (192)
T PF12710_consen 1 VIFDFDGTLTD 11 (192)
T ss_dssp EEEESBTTTBS
T ss_pred eEEecCcCeec
No 308
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=42.31 E-value=9.2 Score=38.35 Aligned_cols=29 Identities=24% Similarity=0.266 Sum_probs=20.2
Q ss_pred ceEEeCCCCCCCCCCCCCCCC----CHHHHHHHHHh
Q 003999 592 RAIFLDYDGTVVPETSIIKSP----GPEVISVLKTL 623 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~p----s~~~~~~L~~L 623 (780)
++|+||.||||+. ..... ...+.+++..+
T Consensus 2 ~~i~fDktGTLt~---~~~~v~~~~~~~~~~~~~~~ 34 (215)
T PF00702_consen 2 DAICFDKTGTLTQ---GKMSVAPPSNEAALAIAAAL 34 (215)
T ss_dssp SEEEEECCTTTBE---SHHEEESCSHHHHHHHHHHH
T ss_pred eEEEEecCCCccc---CeEEEEeccHHHHHHHHHHh
Confidence 5899999999998 33333 45566666555
No 309
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=41.39 E-value=38 Score=43.20 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 609 ~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..+|-+++.+++++|++. |++|+++|||...........+
T Consensus 566 ~Dplr~~v~~aI~~l~~~-Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSA-GIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cCCChHHHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 446778999999999995 9999999999999998888754
No 310
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=40.06 E-value=61 Score=33.73 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=39.1
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC-CChhhHHHHhc
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG-RGRSSLSEWLA 647 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG-R~~~~L~~~f~ 647 (780)
+..+++..|.+.-..+++.|.|||+.... + ..++++++++..+.+|.+-=| |+.+.+++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~~-----~---n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGKP-----K---NLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCCc-----c---hHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 67778888887666799999999997622 2 344555555433333333322 55667777664
No 311
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=39.93 E-value=11 Score=36.16 Aligned_cols=21 Identities=0% Similarity=-0.143 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHcCCCCCcccc
Q 003999 758 PSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~~ 778 (780)
+..+.+.+++.+++++.+|.+
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEE
T ss_pred HHHHHHHHHHHcCCCcceEEE
Confidence 357788888888888877754
No 312
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=38.81 E-value=2.7e+02 Score=31.01 Aligned_cols=155 Identities=16% Similarity=0.126 Sum_probs=103.2
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhh-ccCCCCccc
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE-VYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~-~~g~~~~~p 411 (780)
++++-++=--++-.|.-..=+++.|++-+.+|+.-. .+.|+|.-. .++-. +....+.+++. +.|.
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~---~~~V~Nt~~--~ke~~----~F~~f~~~ldlvr~gk----- 254 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVE---HVYVTNTYH--LKEHP----TFVNFANSLDLVRDGK----- 254 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhChhhcc---eEEEecchh--hhcCH----HHHHHHHhhHHhhcCe-----
Confidence 566777777777778877778889999999998753 555666432 12222 23344445543 3443
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G 490 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ 490 (780)
--+.+..+..+..+=| +|++|---.--|+|-.-+|++-.| =|||- -|+-|. -
T Consensus 255 -asfegR~~~p~fla~~--tD~VvSHqWeN~lNYlY~daLygg-------------------YPLVH-----NS~~l~d~ 307 (364)
T PF10933_consen 255 -ASFEGRFDFPDFLAQH--TDAVVSHQWENPLNYLYYDALYGG-------------------YPLVH-----NSPLLKDV 307 (364)
T ss_pred -eEEeeecChHHHHHhC--CCEEEeccccchhhHHHHHHHhcC-------------------CCccc-----Ccchhccc
Confidence 2345555666666555 699888888899999999998754 26664 344453 3
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV 528 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V 528 (780)
|..-+-+|..+=|+++.+|+..-+.....-.++.++++
T Consensus 308 GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 308 GYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLL 345 (364)
T ss_pred CcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 78888899999999999999877654444334444444
No 313
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=37.96 E-value=25 Score=38.09 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=30.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCC---CEEEEEc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPN---NTVFIVS 635 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g---~~V~IvS 635 (780)
.=-|+||+||.|+- -+.|-++..++|+.|.++.| +.++..|
T Consensus 35 ~fgfafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFR----GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred ceeEEEecccEEEe----cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 34799999999997 34566788999999998644 4455554
No 314
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=37.92 E-value=40 Score=42.37 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=51.8
Q ss_pred HHHHHHhccCceEEeCCCC-----CCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 582 IVSAYRKTERRAIFLDYDG-----TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 582 i~~~y~~a~~rlI~lD~DG-----TL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
....|.+...|.+++=|++ |++..-....+|-+++.++|++|++. |++|+++||............+
T Consensus 494 ~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~-Gi~v~miTGD~~~tA~~ia~~~ 565 (884)
T TIGR01522 494 EAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG-GVRIIMITGDSQETAVSIARRL 565 (884)
T ss_pred HHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3445666677888887766 45443334567889999999999985 9999999999999998887654
No 315
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=36.29 E-value=57 Score=40.28 Aligned_cols=66 Identities=14% Similarity=0.104 Sum_probs=49.8
Q ss_pred HHHHHhccCceEEeCC---CC--CCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 583 VSAYRKTERRAIFLDY---DG--TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 583 ~~~y~~a~~rlI~lD~---DG--TL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+.+...|.+++=+ ++ +++..-....+|-+++.+++++|++. |++|+++||.........-+.+
T Consensus 409 ~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a-GI~v~miTGD~~~tA~~IA~~l 479 (755)
T TIGR01647 409 VDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL-GVEVKMVTGDHLAIAKETARRL 479 (755)
T ss_pred HHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3445555668887755 33 55443334567889999999999995 9999999999999998888765
No 316
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=35.69 E-value=3e+02 Score=34.09 Aligned_cols=136 Identities=15% Similarity=0.057 Sum_probs=83.9
Q ss_pred CCeEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 333 GKKLILGIDDMDIFKGISL-KLLAMEQLL--QQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+...++.+-|+..-|=-.+ .|.-.+++. +.+|+.. ..+++|..|-+..+. ..-.++-+.|..+++.||..-...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhcCChhhCC
Confidence 4566778999998887666 665555443 3467632 346666555444333 2234566788888888886533334
Q ss_pred cccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
.-.|+|+. +..-.--..++.+|||..-+|+ .++|| ||+++ |.-++ .|+|-+|..-|+-.++
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~------ag~EA--SGTsn--MK~am--------NGaLtlgtlDGanvEi 667 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIST------AGKEA--SGTGN--MKLAL--------NGALTVGTLDGANVEI 667 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCC------CCccc--cCcch--hHHHh--------cCceeeecccchHHHH
Confidence 44688886 3455555668999998766664 67775 55432 32232 2677777777764433
No 317
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=35.65 E-value=28 Score=37.48 Aligned_cols=56 Identities=18% Similarity=0.234 Sum_probs=40.1
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.-.++||-||.|..- . .+-+.+.++|+.|.+. |-.++++|-.+..+.+++++..
T Consensus 20 ~~~DtfifDcDGVlW~g---~-~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWLG---E-KPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hhcCEEEEcCCcceeec---C-CCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHH
Confidence 45678999999999872 2 2445666777777775 6778888887777777666543
No 318
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=35.33 E-value=33 Score=40.51 Aligned_cols=62 Identities=15% Similarity=0.223 Sum_probs=49.0
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCC-EEEEEcCCChhhHHHHhccC
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNN-TVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~-~V~IvSGR~~~~L~~~f~~l 649 (780)
.....+.++.-.||++...-.....+-+.+.++|++|++. |. +++++||......+...+.+
T Consensus 338 ~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~-Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 338 ESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL-GIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred hhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc-CCCcEEEEcCCCHHHHHHHHHHc
Confidence 3444566777788887764333456789999999999985 99 99999999999999888765
No 319
>PRK10671 copA copper exporting ATPase; Provisional
Probab=35.23 E-value=68 Score=40.11 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=51.4
Q ss_pred HHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 582 i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
....+.+...+.+++-+||+++..-.....+-+.+.++|++|++. |++++++||......+...+.+
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~-gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA-GYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHc
Confidence 344455666788888889997743223445678899999999885 9999999999999988877754
No 320
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=32.74 E-value=1.2e+02 Score=31.60 Aligned_cols=60 Identities=22% Similarity=0.301 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHhcc-CceEEeCC--CCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC--CChhhHHHHhc
Q 003999 577 LSIDHIVSAYRKTE-RRAIFLDY--DGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG--RGRSSLSEWLA 647 (780)
Q Consensus 577 l~~~~i~~~y~~a~-~rlI~lD~--DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG--R~~~~L~~~f~ 647 (780)
.+..+.++.|.... .++|++|+ |||+-. ++-++++.+.+. .+ .-++++| |+.+.+.+.+.
T Consensus 148 ~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G-------~~~~li~~l~~~---~~-ipvi~~GGi~s~edi~~l~~ 212 (234)
T PRK13587 148 LNLFSFVRQLSDIPLGGIIYTDIAKDGKMSG-------PNFELTGQLVKA---TT-IPVIASGGIRHQQDIQRLAS 212 (234)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCcCCCCc-------cCHHHHHHHHHh---CC-CCEEEeCCCCCHHHHHHHHH
Confidence 35667777777665 68999988 788876 555555444433 22 3467777 78889998885
No 321
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=31.53 E-value=3.1e+02 Score=29.23 Aligned_cols=81 Identities=14% Similarity=0.084 Sum_probs=50.4
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
..++|++++|-.+.. ..++ .++..|+++ ++.+|.+. .+. +- .+
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~----~l~~~~~~~----~~v~g~~~----~~~----------------~~-----~n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIE----ALKALPDYQ----FIVFGPNA----ADP----------------RP-----GN 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHH----HHHhCCCCe----EEEEcCCc----ccc----------------cC-----CC
Confidence 467899999998776 3333 344567665 55454221 000 00 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
|.+. .....+...+++.||++|-.+ |+|. ..|++++|.
T Consensus 234 i~~~--~~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g~ 271 (318)
T PF13528_consen 234 IHVR--PFSTPDFAELMAAADLVISKG---GYTT-ISEALALGK 271 (318)
T ss_pred EEEe--ecChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcCC
Confidence 5533 234578999999999988764 5553 569999975
No 322
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=30.34 E-value=12 Score=37.43 Aligned_cols=62 Identities=18% Similarity=0.143 Sum_probs=44.7
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.......+.+.++++++........+-+++.++|+.|++. |++++|+||............+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~-Gi~~~i~TGD~~~~a~~~~~~l 164 (215)
T PF00702_consen 103 ESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEA-GIKVAILTGDNESTASAIAKQL 164 (215)
T ss_dssp HHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHT-TEEEEEEESSEHHHHHHHHHHT
T ss_pred HhhCCcccceeecCeEEEEEeecCcchhhhhhhhhhhhcc-Ccceeeeecccccccccccccc
Confidence 3334455555556666543222334567899999999995 9999999999999998888765
No 323
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=29.72 E-value=78 Score=29.82 Aligned_cols=56 Identities=16% Similarity=-0.023 Sum_probs=38.8
Q ss_pred CceEEeCCCCCCCCCCCCCC----C--CCHHHHHHHHHhccCCCCEEEEEcCCChh-hHHHHhc
Q 003999 591 RRAIFLDYDGTVVPETSIIK----S--PGPEVISVLKTLCSDPNNTVFIVSGRGRS-SLSEWLA 647 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~----~--ps~~~~~~L~~L~~d~g~~V~IvSGR~~~-~L~~~f~ 647 (780)
.|++.+|+|+|+-|...... . .-+....+|..|++. |++.+++|--.-. .+.+.+.
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~-GVtl~~ASRt~ap~iA~q~L~ 80 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKL-GVTLIHASRTMAPQIASQGLE 80 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhc-CcEEEEecCCCCHHHHHHHHH
Confidence 37899999999999653221 1 226788899999995 9999999855433 3444443
No 324
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=29.63 E-value=33 Score=43.95 Aligned_cols=20 Identities=15% Similarity=0.257 Sum_probs=15.3
Q ss_pred HHHHHHHHHHcCCCCCcccc
Q 003999 759 SSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 759 G~al~~Ll~~l~i~~~~~~~ 778 (780)
......+++.+++++.+|.+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVV 240 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEE
Confidence 56777888888888877754
No 325
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=29.61 E-value=8.5e+02 Score=27.42 Aligned_cols=90 Identities=18% Similarity=0.185 Sum_probs=45.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCCh--hHHHHHHHHHHHHHHHHhhcc-CCCCcccEEEec-CCCCHHHHHHHH
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSG--KDVQEAKKETYLTAKRINEVY-GSPNYEPVVLID-RPVPRFEKSAYY 428 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~--~~~~~l~~ei~~lv~~In~~~-g~~~~~pV~~~~-~~v~~~el~aly 428 (780)
+.++|+-+.. +++.|.+.++|-...| ...++| .++.+++.+-|..- +.+=+.++++.+ .+++..-+..-+
T Consensus 147 ~~~LE~~~~~-----~~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~ 220 (388)
T COG1168 147 FDALEKAFVD-----ERVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF 220 (388)
T ss_pred HHHHHHHHhc-----CCccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh
Confidence 3455544432 3456777888775433 344444 34555665543221 113345566554 455554444333
Q ss_pred HhcceeeeccCCcCCCcchhh
Q 003999 429 AVAECCIVNAVRDGMNLVPYK 449 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~E 449 (780)
+--++.++|-.-+|||.-+.
T Consensus 221 -a~~~it~~saSKtFNlaGL~ 240 (388)
T COG1168 221 -ADNSITLTSASKTFNLAGLK 240 (388)
T ss_pred -hcceEEEeeccccccchhhh
Confidence 22344556666777776554
No 326
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=29.50 E-value=7.9e+02 Score=26.98 Aligned_cols=231 Identities=17% Similarity=0.179 Sum_probs=98.5
Q ss_pred EEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCC----ChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhh
Q 003999 202 VWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP----VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML 277 (780)
Q Consensus 202 VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp----~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l 277 (780)
+||.|.++..+-.+.. .++.++++.||-- |--.+....+ .+....+....+|.+-..+....+.|.+ + .
T Consensus 81 ~~i~~~~~~~~~~~~~--~~~~~~i~lwHG~-~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~-~---f 153 (369)
T PF04464_consen 81 YIISDSYFPDLIYFKK--RKNQKYIQLWHGI-PLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKK-A---F 153 (369)
T ss_dssp EEEESS---T--TS-----TTSEEEE--SS---SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHH-H---T
T ss_pred EEEECCCCCccccccc--CCCcEEEEecCCC-cccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHH-H---h
Confidence 7777744333211111 2578999999976 5443322221 1235566677889877666554444432 2 2
Q ss_pred CceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCCh-----
Q 003999 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI----- 349 (780)
Q Consensus 278 ~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi----- 349 (780)
+... . +++..|. +++......... ..+.+++.+ .++++||+.=.......-
T Consensus 154 ~~~~-------------~----~i~~~G~--PR~D~l~~~~~~--~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 154 GYPE-------------D----KILVTGY--PRNDYLFNKSKE--NRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp T--G-------------G----GEEES----GGGHHHHHSTT---HHHHHHHHTT--SS-EEEEEE----GGG--GGSS-
T ss_pred ccCc-------------c----eEEEeCC--CeEhHHhccCHH--HHHHHHHHhccCCCCcEEEEeeccccccccccccc
Confidence 3221 0 1233443 344433322111 145667666 478899998543222221
Q ss_pred -H--HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 350 -S--LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 350 -~--~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
. .-+..+. .+ ..++ .+|+.-.- |.. +...... .. ....|+.+.. ..++..
T Consensus 213 ~~~~~~~~~l~-~~-~~~~----~~li~k~H------p~~---~~~~~~~-------~~--~~~~i~~~~~---~~~~~~ 265 (369)
T PF04464_consen 213 FFSDLDFEKLN-FL-LKNN----YVLIIKPH------PNM---KKKFKDF-------KE--DNSNIIFVSD---NEDIYD 265 (369)
T ss_dssp ---TT-HHHHH-HH-HTTT----EEEEE--S------HHH---HTT-----------TT---TTTEEE-TT----S-HHH
T ss_pred cccccCHHHHH-HH-hCCC----cEEEEEeC------chh---hhchhhh-------hc--cCCcEEECCC---CCCHHH
Confidence 1 1223333 12 2333 44543221 211 1111111 00 1123665553 337999
Q ss_pred HHHhcceee--eccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE--cCC------CCccccC-C--CcEE
Q 003999 427 YYAVAECCI--VNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV--SEF------IGCSPSL-S--GAIR 493 (780)
Q Consensus 427 ly~~ADv~v--vtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~--Se~------~G~~~~l-~--~al~ 493 (780)
++..||++| .+| +..||+.++. |+|. -+. .|..... . .|-.
T Consensus 266 ll~~aDiLITDySS-------i~fD~~~l~K-------------------Piify~~D~~~Y~~~rg~~~~~~~~~pg~~ 319 (369)
T PF04464_consen 266 LLAAADILITDYSS-------IIFDFLLLNK-------------------PIIFYQPDLEEYEKERGFYFDYEEDLPGPI 319 (369)
T ss_dssp HHHT-SEEEESS-T-------HHHHHGGGT---------------------EEEE-TTTTTTTTTSSBSS-TTTSSSS-E
T ss_pred HHHhcCEEEEechh-------HHHHHHHhCC-------------------CEEEEeccHHHHhhccCCCCchHhhCCCce
Confidence 999999977 344 8999999863 4443 111 3333222 1 2444
Q ss_pred ECCCCHHHHHHHHHHHHcCCHH
Q 003999 494 VNPWDIDAVADAMTLAINMRDS 515 (780)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~ 515 (780)
+ .+.+++.++|..++..+..
T Consensus 320 ~--~~~~eL~~~i~~~~~~~~~ 339 (369)
T PF04464_consen 320 V--YNFEELIEAIENIIENPDE 339 (369)
T ss_dssp E--SSHHHHHHHHTTHHHHHHH
T ss_pred e--CCHHHHHHHHHhhhhCCHH
Confidence 4 4789999999998876543
No 327
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=28.70 E-value=1e+02 Score=30.71 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 615 EVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 615 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...++|+.|++. |.+++|+||++...+...+..+
T Consensus 110 ~~~~~L~~l~~~-g~~~~i~T~~~~~~~~~~l~~~ 143 (197)
T TIGR01548 110 TPKGLLRELHRA-PKGMAVVTGRPRKDAAKFLTTH 143 (197)
T ss_pred CHHHHHHHHHHc-CCcEEEECCCCHHHHHHHHHHc
Confidence 347888888774 8999999999999998888754
No 328
>PRK14057 epimerase; Provisional
Probab=28.28 E-value=4.3e+02 Score=28.11 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=44.8
Q ss_pred eEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH-hcceeeeccC
Q 003999 370 VVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA-VAECCIVNAV 439 (780)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~-~ADv~vvtS~ 439 (780)
.+||+-.+|..++.+-..+..+.++++.+.+..+ ++.-.+.++|.++.+....+.. .||++|.-|.
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGad~~V~GSa 223 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK----REGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSA 223 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEChH
Confidence 5688888888765554455556666666655432 2223456889999998877775 4999998763
No 329
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=28.19 E-value=52 Score=31.40 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=32.3
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCC--hhhHHHHhc
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG--RSSLSEWLA 647 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~--~~~L~~~f~ 647 (780)
+-++|+||.++.-.+...--..++++ .+.+ -|..|+|+|--. ++.++++-.
T Consensus 45 iAildL~G~~l~l~S~R~~~~~evi~---~I~~-~G~PviVAtDV~p~P~~V~Kia~ 97 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSRNMSRSEVIE---WISE-YGKPVIVATDVSPPPETVKKIAR 97 (138)
T ss_pred EEEEecCCcEEEEEeecCCCHHHHHH---HHHH-cCCEEEEEecCCCCcHHHHHHHH
Confidence 66789999999855332222244444 4555 388999998654 456665544
No 330
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=28.16 E-value=72 Score=41.04 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 610 ~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.++.+++.+++++|++. |++|+++||....+......++
T Consensus 655 d~lr~~~~~~I~~l~~a-gi~v~miTGD~~~TA~~iA~~~ 693 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRA-SIRTVMITGDNPLTAVHVAREC 693 (1054)
T ss_pred cCCCccHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 45778999999999995 9999999999999988877654
No 331
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=28.05 E-value=86 Score=39.59 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=47.4
Q ss_pred HHHHHhccCceEEeCC----------------CCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 583 VSAYRKTERRAIFLDY----------------DGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 583 ~~~y~~a~~rlI~lD~----------------DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
...|.+...|++++=| |.|++..-....+|-+++.+++++|++. |++|+++||-........-
T Consensus 506 ~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~a-GI~v~miTGD~~~tA~~IA 584 (902)
T PRK10517 506 TDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKAS-GVTVKILTGDSELVAAKVC 584 (902)
T ss_pred HHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHH
Confidence 3445555567666533 3344443223456789999999999995 9999999999999998887
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
+.+
T Consensus 585 ~~l 587 (902)
T PRK10517 585 HEV 587 (902)
T ss_pred HHc
Confidence 765
No 332
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=27.97 E-value=5.1e+02 Score=32.17 Aligned_cols=135 Identities=13% Similarity=0.030 Sum_probs=82.8
Q ss_pred CCeEEEEeccccccCChHH-HHHHHHHHH--HhCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 333 GKKLILGIDDMDIFKGISL-KLLAMEQLL--QQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+...++.+-|+..-|=-.+ .|.-++++. +.+|+.. ..+++|..|-+..+. ..-.++-+.|..+++.||..-...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY-HMAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc-HHHHHHHHHHHHHHHHhccChhhCC
Confidence 5567788999998887666 565555443 3456541 245666555444333 2234567788888888886543344
Q ss_pred cccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (780)
.-.|+|+.. ..-.--..++.+|||..-+|+ .++|| ||+++ |.-++ .|+|-+|..-|+-.+
T Consensus 605 ~lkVVFlen-Y~VslAe~iipaaDvseqist------ag~EA--SGTsn--MK~al--------NGaltlgtlDGanvE 664 (794)
T TIGR02093 605 KLKVVFVPN-YNVSLAELIIPAADLSEQIST------AGKEA--SGTGN--MKFML--------NGALTIGTLDGANVE 664 (794)
T ss_pred ceeEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCcch--hHHHh--------cCcceeecccchhHH
Confidence 446888863 444555568999998776664 56775 55432 22222 256677666665433
No 333
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=27.42 E-value=5.8e+02 Score=30.70 Aligned_cols=168 Identities=14% Similarity=0.166 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
+..|+-+.++|++-|+-+ |+...-|.-++ +..++ .++.. |... ..|+|.. -...+|=..-+.
T Consensus 773 P~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~t----y~~~~----Gl~p-~riifs~-va~k~eHvrr~~ 834 (966)
T KOG4626|consen 773 PSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRT----YAEQL----GLEP-DRIIFSP-VAAKEEHVRRGQ 834 (966)
T ss_pred HHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHH----HHHHh----CCCc-cceeecc-ccchHHHHHhhh
Confidence 567899999999999876 66667776443 23333 33332 3211 1255432 335577788899
Q ss_pred hcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC--C-CcEEECCCCHHHHHHHH
Q 003999 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--S-GAIRVNPWDIDAVADAM 506 (780)
Q Consensus 430 ~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~-~al~VnP~d~~~~A~ai 506 (780)
.||||+-|++.-|-- +-.|-...|.+--.| +|-...|..++ |... + +-++++ +-++-.+--
T Consensus 835 LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTm------------pge~lAsrVa~-Sll~~~Gl~hliak--~~eEY~~ia 898 (966)
T KOG4626|consen 835 LADVCLDTPLCNGHT-TGMDVLWAGVPMVTM------------PGETLASRVAA-SLLTALGLGHLIAK--NREEYVQIA 898 (966)
T ss_pred hhhhcccCcCcCCcc-cchhhhccCCceeec------------ccHHHHHHHHH-HHHHHcccHHHHhh--hHHHHHHHH
Confidence 999999999876632 122333332110000 00011112211 1111 1 123333 344443333
Q ss_pred HHHHcCCHHHHHHHHHHHhhHhhh--CCHHHHHHHHHHHHHHHHHhh
Q 003999 507 TLAINMRDSEKQLRHEKHYRYVST--HDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~V~~--~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
-++-++.+.-+..|++--...+++ +|..+|+...-....+.++.+
T Consensus 899 V~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y 945 (966)
T KOG4626|consen 899 VRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKY 945 (966)
T ss_pred HHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHh
Confidence 333334444455665554444544 788999887666655555543
No 334
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=27.40 E-value=52 Score=33.69 Aligned_cols=53 Identities=25% Similarity=0.316 Sum_probs=37.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChh---hHHHHhc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS---SLSEWLA 647 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~---~L~~~f~ 647 (780)
..+-+++|+-|||-. ... +-+...++|++|... +.+|=.+|.-+.+ .|.+.+.
T Consensus 6 ~v~gvLlDlSGtLh~---e~~-avpga~eAl~rLr~~-~~kVkFvTNttk~Sk~~l~~rL~ 61 (262)
T KOG3040|consen 6 AVKGVLLDLSGTLHI---EDA-AVPGAVEALKRLRDQ-HVKVKFVTNTTKESKRNLHERLQ 61 (262)
T ss_pred ccceEEEeccceEec---ccc-cCCCHHHHHHHHHhc-CceEEEEecCcchhHHHHHHHHH
Confidence 456789999999987 332 446788999999974 7787777655544 4544443
No 335
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=27.29 E-value=1e+03 Score=27.77 Aligned_cols=101 Identities=8% Similarity=0.047 Sum_probs=56.9
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE-cCCCC---ccccC--
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV-SEFIG---CSPSL-- 488 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~-Se~~G---~~~~l-- 488 (780)
+.+.+|+.++.+- ..+++|| .+-|+| ...||+.+|. |+|+ .-++- -+.-+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fI---tHGG~~-s~~Eal~~Gv-------------------P~v~iP~~~DQ~~Na~rv~~ 405 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFV---TQGGVQ-STDEAIDALV-------------------PMVGLPMMGDQFYNTNKYVE 405 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEE---ecCCcc-cHHHHHHcCC-------------------CEEECCCCccHHHHHHHHHH
Confidence 4567887765432 4567666 245654 6679999975 3333 22211 11112
Q ss_pred CC-cEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh------CCHHHHHHHHH
Q 003999 489 SG-AIRVNP--WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST------HDVAYWARSFA 541 (780)
Q Consensus 489 ~~-al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~------~~~~~Wa~~~l 541 (780)
.| |+.+++ .+.+++++||+++|+.+. -+++.++..+.++. .....|.+..+
T Consensus 406 ~G~G~~l~~~~~t~~~l~~ai~~vl~~~~--y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 406 LGIGRALDTVTVSAAQLVLAIVDVIENPK--YRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred cCcEEEeccCCcCHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 13 677765 567999999999998753 33334444443432 23455665443
No 336
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=27.11 E-value=41 Score=31.99 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|++|++. |.+++|+|+.+...+...+..+
T Consensus 78 ~~~~~~~~L~~l~~~-~~~~~i~Sn~~~~~~~~~l~~~ 114 (176)
T PF13419_consen 78 PYPGVRELLERLKAK-GIPLVIVSNGSRERIERVLERL 114 (176)
T ss_dssp ESTTHHHHHHHHHHT-TSEEEEEESSEHHHHHHHHHHT
T ss_pred hhhhhhhhhhhcccc-cceeEEeecCCccccccccccc
Confidence 556799999999874 9999999999999888877765
No 337
>KOG0390 consensus DNA repair protein, SNF2 family [Replication, recombination and repair]
Probab=26.87 E-value=1e+03 Score=29.45 Aligned_cols=126 Identities=21% Similarity=0.155 Sum_probs=72.2
Q ss_pred EEEeccccccCCh-HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEe
Q 003999 337 ILGIDDMDIFKGI-SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415 (780)
Q Consensus 337 il~Vdrld~~KGi-~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~ 415 (780)
-..+-+++..+|. .-+|..+..++...-+-- .+.+|+.. .|....+.++.+.+. .||+ +..+
T Consensus 563 ~~~~~~~~~~~~~ks~kl~~L~~ll~~~~ek~--~~~~v~Is-------ny~~tldl~e~~~~~-------~g~~-~~rL 625 (776)
T KOG0390|consen 563 DPGKLKLDAGDGSKSGKLLVLVFLLEVIREKL--LVKSVLIS-------NYTQTLDLFEQLCRW-------RGYE-VLRL 625 (776)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHhhhc--ceEEEEec-------cHHHHHHHHHHHHhh-------cCce-EEEE
Confidence 3345588888888 788888888874332211 23333332 243444444444322 1343 6678
Q ss_pred cCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCc---E
Q 003999 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGA---I 492 (780)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a---l 492 (780)
+|.++..++..+. |.||=..-- ...-|..|..+||.=.|-|| |
T Consensus 626 dG~~~~~qRq~~v------------d~FN~p~~~----------------------~~vfLlSsKAgg~GinLiGAsRli 671 (776)
T KOG0390|consen 626 DGKTSIKQRQKLV------------DTFNDPESP----------------------SFVFLLSSKAGGEGLNLIGASRLI 671 (776)
T ss_pred cCCCchHHHHHHH------------HhccCCCCC----------------------ceEEEEecccccCceeecccceEE
Confidence 9999999988765 334322110 01223334444555455443 4
Q ss_pred EEC-CCCHHHHHHHHHHHHcCC
Q 003999 493 RVN-PWDIDAVADAMTLAINMR 513 (780)
Q Consensus 493 ~Vn-P~d~~~~A~ai~~aL~m~ 513 (780)
+.+ .||+..--+||.+|-...
T Consensus 672 l~D~dWNPa~d~QAmaR~~RdG 693 (776)
T KOG0390|consen 672 LFDPDWNPAVDQQAMARAWRDG 693 (776)
T ss_pred EeCCCCCchhHHHHHHHhccCC
Confidence 555 599999999999988754
No 338
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=26.83 E-value=59 Score=32.62 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+-+.+.++|++|++. |.+++|+||.+...+...+..+
T Consensus 76 ~~~g~~~~L~~L~~~-g~~~~i~Sn~~~~~~~~~l~~~ 112 (205)
T TIGR01454 76 VFPGVPELLAELRAD-GVGTAIATGKSGPRARSLLEAL 112 (205)
T ss_pred cCCCHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHc
Confidence 556899999999985 8999999999999888877654
No 339
>PRK11590 hypothetical protein; Provisional
Probab=26.31 E-value=79 Score=32.15 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=32.5
Q ss_pred CHHHHHHH-HHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEec
Q 003999 613 GPEVISVL-KTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAE 657 (780)
Q Consensus 613 s~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliae 657 (780)
-+.+.+.| +.|++ .|.+++||||.....++.++..++ ...++|.
T Consensus 97 ~pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t 144 (211)
T PRK11590 97 FPVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIAS 144 (211)
T ss_pred CccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHHccccccCceEEE
Confidence 34788888 45766 488999999999999988876543 2445543
No 340
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=26.26 E-value=92 Score=32.12 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=33.7
Q ss_pred EEeCCCCCCCCCCCCC-----------CCCCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 594 IFLDYDGTVVPETSII-----------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~-----------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
+.+|++|++..+.+.. ...-.++.+.|+++.+|++++.+|+.+-++.
T Consensus 1 l~i~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~g 58 (222)
T cd07018 1 LVLDLSGSLVEQPPPSPPLLLGGGESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLS 58 (222)
T ss_pred CEEcCCCcccccCCCCChhhhccCCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCC
Confidence 3689999998754321 1112688899999999999998888765543
No 341
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=26.01 E-value=2.2e+02 Score=29.86 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=40.0
Q ss_pred CCHHHHHH---HHHhccCceEEeCCCCCCCCCCCCCCCCC------------------HHHHHHHHHhccCCCCEEEEEc
Q 003999 577 LSIDHIVS---AYRKTERRAIFLDYDGTVVPETSIIKSPG------------------PEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 577 l~~~~i~~---~y~~a~~rlI~lD~DGTL~~~~~~~~~ps------------------~~~~~~L~~L~~d~g~~V~IvS 635 (780)
++-+.++. ..-.+. .++++|.||-+......-..++ +.+..+++.+.. .+..++|++
T Consensus 155 ~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~g~~~gGm~~kl~~a~~~~~~-~~~~v~I~~ 232 (252)
T cd04249 155 VNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGVITDGMIVKVNAALDAAQS-LRRGIDIAS 232 (252)
T ss_pred ecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCCcCccccCHHHHHHHHhcCCCcCCcHHHHHHHHHHHHh-CCCeEEEEe
Confidence 44444443 223455 6899999998864221112222 122333443433 256899999
Q ss_pred CCChhhHHHHhc
Q 003999 636 GRGRSSLSEWLA 647 (780)
Q Consensus 636 GR~~~~L~~~f~ 647 (780)
|+....+.+.|.
T Consensus 233 g~~~~~l~~~l~ 244 (252)
T cd04249 233 WQYPEQLTALLA 244 (252)
T ss_pred CCCccHHHHHHc
Confidence 998888888875
No 342
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=25.11 E-value=86 Score=38.32 Aligned_cols=68 Identities=15% Similarity=0.260 Sum_probs=53.2
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.-...+.+..+-.+++-.||.+...-....++-++..+++++|++. |+++++.||-.....+..-+++
T Consensus 507 ~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~-Gi~~~mLTGDn~~~A~~iA~~l 574 (713)
T COG2217 507 ERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKAL-GIKVVMLTGDNRRTAEAIAKEL 574 (713)
T ss_pred hhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHc
Confidence 3444555555568999999977653223456788999999999995 9999999999999998888754
No 343
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=24.88 E-value=3.2e+02 Score=31.02 Aligned_cols=76 Identities=9% Similarity=0.124 Sum_probs=44.7
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccc
Q 003999 382 SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMD 461 (780)
Q Consensus 382 ~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~ 461 (780)
-|.+|.-+|.|+++.+++++.+ ++| ..++.+.+. ..+|-|=+..-.-.++|...-||+--.|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 69 (404)
T TIGR03286 8 CGTEYSGVQPEIEKAAEKVGAE--------IIF--PEVDLDYID---EACRDFGLTVKSGDLKLMIARAMALVEG----- 69 (404)
T ss_pred ccccchhhHHHHHHHHHHcCCE--------EEc--ccccHHHHH---HHHHHhCcccCCCchHHHHHHHHHHhcC-----
Confidence 3678999999999999998764 432 234444443 3344332333333666766666665332
Q ss_pred cccccCCCCCCCceEEEcCCC
Q 003999 462 EALGRERDSPHTSMLVVSEFI 482 (780)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~ 482 (780)
..+-.++.|.|=|-
T Consensus 70 -------~~~~~~~~~~~~~~ 83 (404)
T TIGR03286 70 -------YTEADAVFIATCFR 83 (404)
T ss_pred -------CcccceEEEeehhc
Confidence 12335777776553
No 344
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=24.43 E-value=69 Score=32.16 Aligned_cols=37 Identities=16% Similarity=0.067 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+-+.+.++|+.|++. |.+++|+|+.+...++.++...
T Consensus 86 ~~~g~~~~L~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 122 (213)
T TIGR01449 86 VFPGVEATLGALRAK-GLRLGLVTNKPTPLARPLLELL 122 (213)
T ss_pred cCCCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 445789999999884 8999999999999998888764
No 345
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=24.31 E-value=98 Score=38.90 Aligned_cols=68 Identities=10% Similarity=0.152 Sum_probs=47.6
Q ss_pred HHHHHHHhccCceEEeCC-------------CC---CCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHH
Q 003999 581 HIVSAYRKTERRAIFLDY-------------DG---TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~-------------DG---TL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 644 (780)
.....|.+...|.+++=| |+ |++..-....+|-+++.+++++|++. |++|+++||-.......
T Consensus 469 ~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a-GI~vvmiTGD~~~tA~a 547 (867)
T TIGR01524 469 DMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN-GINVKVLTGDNEIVTAR 547 (867)
T ss_pred HHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC-CCEEEEEcCCCHHHHHH
Confidence 344455556667776544 11 23322123456789999999999995 99999999999999888
Q ss_pred HhccC
Q 003999 645 WLAPC 649 (780)
Q Consensus 645 ~f~~l 649 (780)
.-+.+
T Consensus 548 IA~~l 552 (867)
T TIGR01524 548 ICQEV 552 (867)
T ss_pred HHHHc
Confidence 77755
No 346
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=23.94 E-value=62 Score=33.41 Aligned_cols=16 Identities=31% Similarity=0.644 Sum_probs=14.4
Q ss_pred cCceEEeCCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVPE 605 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~ 605 (780)
+.++++||+|.||.|.
T Consensus 14 ~~~~l~FDiDdtLYp~ 29 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPL 29 (244)
T ss_pred cceEEEEecccccccC
Confidence 5789999999999994
No 347
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=23.78 E-value=4.7e+02 Score=27.16 Aligned_cols=75 Identities=21% Similarity=0.209 Sum_probs=50.9
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH-Hhcc
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY-AVAE 432 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly-~~AD 432 (780)
.+++.+|.+- .++|++-.+|..+.-.-..+..+.++++-+.+..+ + ...+-++|.+..+....+. +.||
T Consensus 123 ~~i~~~l~~v-----D~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~----~-~~~IeVDGGI~~~t~~~~~~AGad 192 (220)
T COG0036 123 EALEPVLDDV-----DLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDER----L-DILIEVDGGINLETIKQLAAAGAD 192 (220)
T ss_pred HHHHHHHhhC-----CEEEEEeECCCCcccccCHHHHHHHHHHHHHhccc----C-CeEEEEeCCcCHHHHHHHHHcCCC
Confidence 4555555532 36788888888776554555666666666555442 1 2355688999998888877 7899
Q ss_pred eeeecc
Q 003999 433 CCIVNA 438 (780)
Q Consensus 433 v~vvtS 438 (780)
++|.-|
T Consensus 193 ~~VaGS 198 (220)
T COG0036 193 VFVAGS 198 (220)
T ss_pred EEEEEE
Confidence 999877
No 348
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=23.65 E-value=3.4e+02 Score=28.30 Aligned_cols=66 Identities=11% Similarity=0.141 Sum_probs=42.7
Q ss_pred eEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH-hcceeeeccC
Q 003999 370 VVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA-VAECCIVNAV 439 (780)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~-~ADv~vvtS~ 439 (780)
.+||+-.+|..++..-.....+.+.++.+.+..+ ++.-.+..+|.+..+....+.. .||++|.-|.
T Consensus 143 ~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGaD~~V~GSa 209 (228)
T PRK08091 143 LIQILTLDPRTGTKAPSDLILDRVIQVENRLGNR----RVEKLISIDGSMTLELASYLKQHQIDWVVSGSA 209 (228)
T ss_pred EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEChh
Confidence 5688888887665443344455566665555432 2233456889999888877665 4999998764
No 349
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=23.36 E-value=7.2e+02 Score=27.21 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=49.8
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
.++.+++..+--.+.|--+. .+.++.+.|.+. .++ +|.+|+|.- .+. ...+++++.++ . .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~e---~e~----~~~~~i~~~~~----~---~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPDK---DDL----ACVNEIAQGCQ----T---P 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCCh---HHH----HHHHHHHHhcC----C---C
Confidence 34567778777667777653 445554444432 333 444565431 111 11233332221 1 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+++-+.+..+..|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 3444667889999999999999988654
No 350
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=23.28 E-value=1.1e+02 Score=38.77 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 609 ~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..+|-+++.+++++|++. |++|+++||.........-..+
T Consensus 577 ~Dplr~~~~~aI~~l~~a-GI~v~miTGD~~~tA~~iA~~~ 616 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRA-GITVRMVTGDNIDTAKAIARNC 616 (941)
T ss_pred cCCCchhHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHc
Confidence 456789999999999995 9999999999999998877654
No 351
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=23.16 E-value=3.7e+02 Score=28.04 Aligned_cols=65 Identities=14% Similarity=0.073 Sum_probs=43.0
Q ss_pred eEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH-hcceeeecc
Q 003999 370 VVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA-VAECCIVNA 438 (780)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~-~ADv~vvtS 438 (780)
.|||+..+|..++.+-..+..+.+.++.+.++.+ ++...+..+|.+..+-+..+.. .||++|+-|
T Consensus 133 ~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~~i~~~~~aGad~~V~Gs 198 (229)
T PRK09722 133 KITVMTVDPGFAGQPFIPEMLDKIAELKALRERN----GLEYLIEVDGSCNQKTYEKLMEAGADVFIVGT 198 (229)
T ss_pred EEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhc----CCCeEEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 5688888887665444455555666665555432 2233456889999888877665 499999873
No 352
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=22.58 E-value=3.9e+02 Score=31.44 Aligned_cols=93 Identities=19% Similarity=0.179 Sum_probs=64.3
Q ss_pred EEEEeccccccCChHHHHHHHHHHHH-hCCCCCC--ceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 336 LILGIDDMDIFKGISLKLLAMEQLLQ-QHPGMRG--KVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 336 vil~Vdrld~~KGi~~~l~A~~~ll~-~~P~~~~--~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
=++++.+.--=|.+..+|=|+.++.+ ++..-++ ..||| -.|+| ||..++.+.+.++....+ ..-+
T Consensus 130 D~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLV--L~PTR-------ELA~QV~~~~~~~~~~~~---~~~~ 197 (519)
T KOG0331|consen 130 DLVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLV--LAPTR-------ELAVQVQAEAREFGKSLR---LRST 197 (519)
T ss_pred ceEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEE--EcCcH-------HHHHHHHHHHHHHcCCCC---ccEE
Confidence 47788999999999999999999987 3333333 45665 44774 666777777766654433 2223
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCC
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVR 440 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~r 440 (780)
-+++|.--..++..+=+.+||+|-|+-|
T Consensus 198 cvyGG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 198 CVYGGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred EEeCCCCccHHHHHHhcCCcEEEeCChH
Confidence 3344444457889999999999999843
No 353
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=22.52 E-value=4.8e+02 Score=27.69 Aligned_cols=52 Identities=13% Similarity=0.047 Sum_probs=30.5
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHH
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 645 (780)
..++.+|.||+.+. ....|+.+..=-+.--++.|.+..+|=|==.....-..
T Consensus 80 ~Div~vd~dG~~v~---G~~kPs~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~ 131 (260)
T PRK07090 80 SNLLLVDEDLNVLD---GEGMPNPANRFHSWIYRARPDVNCIIHTHPPHVAALSM 131 (260)
T ss_pred HHeEEECCCCCCCC---CCCCCChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHh
Confidence 46999999999886 34467765532222223346676666655544444333
No 354
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=22.31 E-value=1.7e+02 Score=31.76 Aligned_cols=68 Identities=19% Similarity=0.175 Sum_probs=43.9
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc------C--CC-cE
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS------L--SG-AI 492 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------l--~~-al 492 (780)
+++.++|..||++|..+ |++ +..|++++|. |+|+.-+.|-.++ + .| |+
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g~-------------------P~l~ip~~~~~eQ~~na~~l~~~g~~~ 295 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLGK-------------------PLIVIPDLGQFEQGNNAVKLEDLGCGI 295 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcCC-------------------CEEEEcCCCcccHHHHHHHHHHCCCEE
Confidence 68999999999999876 555 5889999974 4455444443332 2 13 66
Q ss_pred EECCCCHHHHHHHHHHHHcCC
Q 003999 493 RVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.++..+. ++.+++...++++
T Consensus 296 ~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 296 ALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred EcChhhH-HHHHHHHhccccc
Confidence 7776666 4444555544443
No 355
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=21.80 E-value=86 Score=33.27 Aligned_cols=58 Identities=16% Similarity=0.171 Sum_probs=39.2
Q ss_pred ceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhcc-----CCCCEEEEEcCCChhhHH
Q 003999 592 RAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCS-----DPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~-----d~g~~V~IvSGR~~~~L~ 643 (780)
-=|+||-|++|.+..+. ...|-......|.+|++ ++.+.++|||.|+-..-+
T Consensus 122 lRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~ 201 (264)
T PF06189_consen 122 LRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHE 201 (264)
T ss_pred eEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhH
Confidence 34789999999875321 22344677777777775 346789999999877655
Q ss_pred HHhccC
Q 003999 644 EWLAPC 649 (780)
Q Consensus 644 ~~f~~l 649 (780)
+.+.-+
T Consensus 202 RvI~TL 207 (264)
T PF06189_consen 202 RVIRTL 207 (264)
T ss_pred HHHHHH
Confidence 555433
No 356
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=21.39 E-value=1.3e+02 Score=38.04 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 608 IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 608 ~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+|-+++.+++++|++. |++|+++||-........-+.+
T Consensus 547 l~Dp~R~~a~~aI~~l~~a-GI~v~miTGD~~~tA~aIA~~l 587 (903)
T PRK15122 547 FLDPPKESAAPAIAALREN-GVAVKVLTGDNPIVTAKICREV 587 (903)
T ss_pred ccCccHHHHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3456789999999999995 9999999999999998887755
No 357
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=20.05 E-value=96 Score=29.33 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=29.1
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.++|+.|.+. |.+++|+|++....+..+++.
T Consensus 67 ~g~~e~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~ 100 (154)
T TIGR01549 67 RGAADLLKRLKEA-GIKLGIISNGSLRAQKLLLRK 100 (154)
T ss_pred cCHHHHHHHHHHC-cCeEEEEeCCchHHHHHHHHH
Confidence 4688999999884 899999999999988877765
Done!