Query 003999
Match_columns 780
No_of_seqs 498 out of 3209
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:56:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5t_A Putative glycosyltransf 100.0 4E-108 1E-112 929.0 42.1 456 58-550 2-476 (496)
2 1uqt_A Alpha, alpha-trehalose- 100.0 2.6E-93 9.1E-98 815.1 40.4 453 59-547 2-454 (482)
3 3fro_A GLGA glycogen synthase; 99.9 2.9E-25 9.8E-30 247.8 28.6 314 177-549 99-432 (439)
4 3vue_A GBSS-I, granule-bound s 99.9 1.7E-23 5.7E-28 242.3 24.7 294 199-546 154-510 (536)
5 2r60_A Glycosyl transferase, g 99.9 8.9E-24 3.1E-28 241.8 17.5 303 200-551 122-463 (499)
6 3okp_A GDP-mannose-dependent a 99.9 1.7E-22 6E-27 222.2 27.1 286 191-549 81-381 (394)
7 2qzs_A Glycogen synthase; glyc 99.9 2.5E-22 8.6E-27 228.6 29.1 299 199-550 130-479 (485)
8 3c48_A Predicted glycosyltrans 99.9 8.9E-23 3.1E-27 228.7 23.2 293 199-550 123-428 (438)
9 1rzu_A Glycogen synthase 1; gl 99.9 3.6E-22 1.2E-26 227.3 26.9 296 199-549 131-477 (485)
10 2x6q_A Trehalose-synthase TRET 99.9 8E-23 2.7E-27 227.9 21.0 298 174-546 105-413 (416)
11 3oy2_A Glycosyltransferase B73 99.9 2.7E-22 9.3E-27 223.2 24.3 287 193-551 78-394 (413)
12 2jjm_A Glycosyl transferase, g 99.9 7.6E-22 2.6E-26 218.4 24.7 283 192-549 95-387 (394)
13 3nb0_A Glycogen [starch] synth 99.9 5.4E-21 1.8E-25 220.4 32.0 310 200-550 183-636 (725)
14 3s28_A Sucrose synthase 1; gly 99.9 1.9E-22 6.6E-27 241.8 19.6 310 199-547 408-769 (816)
15 2gek_A Phosphatidylinositol ma 99.9 1.7E-21 5.7E-26 215.4 24.6 278 192-550 103-386 (406)
16 2bfw_A GLGA glycogen synthase; 99.8 9.7E-20 3.3E-24 182.0 19.3 189 302-531 2-199 (200)
17 2iuy_A Avigt4, glycosyltransfe 99.8 1.1E-19 3.7E-24 197.1 17.2 243 191-549 79-337 (342)
18 2iw1_A Lipopolysaccharide core 99.8 1.2E-20 4E-25 206.3 8.2 227 254-546 136-370 (374)
19 1u02_A Trehalose-6-phosphate p 99.8 1.5E-18 5.1E-23 180.0 13.9 174 592-780 2-179 (239)
20 3qhp_A Type 1 capsular polysac 99.8 6.1E-18 2.1E-22 163.9 15.1 161 334-538 2-165 (166)
21 2x0d_A WSAF; GT4 family, trans 99.7 1.6E-16 5.6E-21 178.0 19.9 160 298-514 218-381 (413)
22 3dao_A Putative phosphatse; st 99.7 1.8E-16 6.1E-21 168.1 18.5 183 584-777 14-231 (283)
23 3beo_A UDP-N-acetylglucosamine 99.7 1.3E-16 4.3E-21 174.6 16.0 274 191-542 90-371 (375)
24 1vgv_A UDP-N-acetylglucosamine 99.7 4.8E-16 1.6E-20 170.8 20.2 280 190-542 80-371 (384)
25 3f9r_A Phosphomannomutase; try 99.7 1.3E-16 4.3E-21 166.4 13.5 179 590-776 3-202 (246)
26 3pgv_A Haloacid dehalogenase-l 99.7 2.1E-16 7.2E-21 167.7 15.1 184 584-777 14-229 (285)
27 2fue_A PMM 1, PMMH-22, phospho 99.7 4.5E-16 1.5E-20 163.4 16.8 183 583-776 5-213 (262)
28 2hy7_A Glucuronosyltransferase 99.7 2.9E-16 9.8E-21 175.5 15.7 239 200-543 126-373 (406)
29 2amy_A PMM 2, phosphomannomuta 99.7 8.5E-16 2.9E-20 159.5 15.2 177 589-776 4-204 (246)
30 4dw8_A Haloacid dehalogenase-l 99.6 3.5E-15 1.2E-19 157.2 18.3 178 590-777 4-217 (279)
31 1xvi_A MPGP, YEDP, putative ma 99.6 1.6E-15 5.3E-20 160.5 15.4 181 590-780 8-216 (275)
32 3l7y_A Putative uncharacterize 99.6 2.8E-15 9.5E-20 160.6 17.1 178 590-777 36-248 (304)
33 2f9f_A First mannosyl transfer 99.6 9.2E-16 3.1E-20 151.0 11.9 141 332-514 21-164 (177)
34 1rlm_A Phosphatase; HAD family 99.6 6.5E-15 2.2E-19 155.1 19.2 176 591-777 3-211 (271)
35 1rkq_A Hypothetical protein YI 99.6 3.4E-15 1.1E-19 158.4 15.8 176 591-777 5-218 (282)
36 3dnp_A Stress response protein 99.6 1.2E-14 4E-19 154.0 20.0 177 590-777 5-222 (290)
37 2b30_A Pvivax hypothetical pro 99.6 2.7E-15 9.1E-20 160.9 15.1 177 590-777 26-244 (301)
38 2vsy_A XCC0866; transferase, g 99.6 7.8E-15 2.7E-19 170.2 18.1 199 298-550 345-562 (568)
39 3fzq_A Putative hydrolase; YP_ 99.6 7.2E-15 2.5E-19 153.9 16.1 176 591-777 5-220 (274)
40 1nf2_A Phosphatase; structural 99.6 1.8E-14 6.2E-19 151.5 18.3 175 591-777 2-210 (268)
41 3mpo_A Predicted hydrolase of 99.6 1.1E-14 3.8E-19 153.3 15.5 178 590-777 4-217 (279)
42 2pq0_A Hypothetical conserved 99.6 2.9E-14 1E-18 148.5 16.6 175 591-777 3-203 (258)
43 3r4c_A Hydrolase, haloacid deh 99.6 3.8E-14 1.3E-18 148.3 16.0 175 590-777 11-214 (268)
44 1nrw_A Hypothetical protein, h 99.6 1.3E-13 4.3E-18 146.5 20.1 177 591-777 4-236 (288)
45 1s2o_A SPP, sucrose-phosphatas 99.5 9.1E-15 3.1E-19 151.8 10.6 166 592-777 4-182 (244)
46 1v4v_A UDP-N-acetylglucosamine 99.5 5.4E-14 1.9E-18 154.2 16.3 244 190-513 85-335 (376)
47 1l6r_A Hypothetical protein TA 99.5 3.3E-14 1.1E-18 146.1 12.4 165 591-777 5-173 (227)
48 1f0k_A MURG, UDP-N-acetylgluco 99.5 4.3E-14 1.5E-18 154.0 13.5 257 191-551 91-361 (364)
49 1wr8_A Phosphoglycolate phosph 99.5 7.6E-14 2.6E-18 143.4 14.2 166 591-777 3-173 (231)
50 2xci_A KDO-transferase, 3-deox 99.5 3.3E-13 1.1E-17 149.0 18.6 249 190-530 105-362 (374)
51 2rbk_A Putative uncharacterize 99.5 5.9E-14 2E-18 146.7 11.9 173 592-777 3-207 (261)
52 2zos_A MPGP, mannosyl-3-phosph 99.5 2.8E-13 9.6E-18 140.9 14.2 170 591-776 2-199 (249)
53 3dzc_A UDP-N-acetylglucosamine 99.4 1E-11 3.6E-16 138.1 22.6 253 189-513 104-368 (396)
54 3zx4_A MPGP, mannosyl-3-phosph 99.4 2.2E-13 7.5E-18 142.3 6.7 171 593-780 2-202 (259)
55 3ot5_A UDP-N-acetylglucosamine 99.3 1.6E-10 5.5E-15 128.8 21.0 249 189-514 107-363 (403)
56 3gyg_A NTD biosynthesis operon 99.2 2.1E-10 7.3E-15 121.3 15.2 177 590-777 21-231 (289)
57 4hwg_A UDP-N-acetylglucosamine 98.7 6.3E-07 2.1E-11 99.1 20.7 245 189-514 87-344 (385)
58 3rhz_A GTF3, nucleotide sugar 98.7 4.8E-07 1.6E-11 98.3 18.3 246 191-542 68-331 (339)
59 2obb_A Hypothetical protein; s 98.5 1.6E-07 5.5E-12 88.8 6.5 68 591-659 3-75 (142)
60 3pdw_A Uncharacterized hydrola 98.2 2.1E-06 7.1E-11 89.2 8.6 68 590-662 5-79 (266)
61 1vjr_A 4-nitrophenylphosphatas 98.2 9E-07 3.1E-11 92.0 4.1 68 590-662 16-90 (271)
62 2gj4_A Glycogen phosphorylase, 98.1 0.00028 9.6E-09 83.5 23.2 151 332-506 548-710 (824)
63 1xpj_A Hypothetical protein; s 98.1 3.6E-06 1.2E-10 77.9 5.6 49 592-641 2-53 (126)
64 1l5w_A Maltodextrin phosphoryl 98.0 0.00023 7.8E-09 83.9 21.7 149 332-503 524-684 (796)
65 2c4m_A Glycogen phosphorylase; 98.0 0.00012 4E-09 86.4 18.5 151 332-504 514-678 (796)
66 3qgm_A P-nitrophenyl phosphata 97.9 5.9E-06 2E-10 85.7 4.2 68 590-662 7-81 (268)
67 1k1e_A Deoxy-D-mannose-octulos 97.8 2E-05 6.7E-10 77.2 6.8 59 590-649 7-72 (180)
68 3epr_A Hydrolase, haloacid deh 97.8 6.7E-06 2.3E-10 85.4 3.4 69 590-663 4-79 (264)
69 2x4d_A HLHPP, phospholysine ph 97.8 5.9E-06 2E-10 84.9 3.0 59 590-649 11-72 (271)
70 4fzr_A SSFS6; structural genom 97.8 0.00023 7.7E-09 78.1 14.4 98 412-538 286-393 (398)
71 2oyc_A PLP phosphatase, pyrido 97.7 8.9E-05 3E-09 78.7 9.6 79 577-662 9-95 (306)
72 3otg_A CALG1; calicheamicin, T 97.6 0.00019 6.6E-09 78.7 11.6 155 333-542 242-405 (412)
73 3q3e_A HMW1C-like glycosyltran 97.6 0.00035 1.2E-08 80.7 13.8 173 334-549 441-625 (631)
74 3tsa_A SPNG, NDP-rhamnosyltran 97.5 9.9E-05 3.4E-09 80.6 6.8 153 333-540 218-383 (391)
75 3s2u_A UDP-N-acetylglucosamine 97.4 0.018 6.2E-07 62.5 23.8 83 422-528 244-339 (365)
76 2wm8_A MDP-1, magnesium-depend 97.4 0.00012 4E-09 71.9 5.3 60 589-649 25-106 (187)
77 2p9j_A Hypothetical protein AQ 97.4 7.4E-05 2.5E-09 71.2 3.2 59 590-649 8-73 (162)
78 2iyf_A OLED, oleandomycin glyc 97.4 0.00042 1.4E-08 76.7 9.7 101 412-541 285-395 (430)
79 3e8m_A Acylneuraminate cytidyl 97.3 9.5E-05 3.3E-09 70.6 3.4 59 590-649 3-68 (164)
80 2i33_A Acid phosphatase; HAD s 97.2 9.6E-05 3.3E-09 77.0 1.7 59 589-648 57-140 (258)
81 3l8h_A Putative haloacid dehal 97.2 0.00028 9.5E-09 68.2 4.8 48 591-639 1-54 (179)
82 1zjj_A Hypothetical protein PH 97.1 8.1E-05 2.8E-09 77.1 0.8 67 592-663 2-75 (263)
83 3n1u_A Hydrolase, HAD superfam 97.1 0.00026 9E-09 70.0 3.7 60 589-649 17-83 (191)
84 2p6p_A Glycosyl transferase; X 97.0 0.0051 1.7E-07 66.8 14.0 137 334-530 211-363 (384)
85 2o6l_A UDP-glucuronosyltransfe 97.0 0.0012 4.2E-08 63.2 7.7 132 333-524 21-164 (170)
86 2pr7_A Haloacid dehalogenase/e 97.0 0.00033 1.1E-08 64.0 3.2 53 591-648 2-54 (137)
87 2r8e_A 3-deoxy-D-manno-octulos 96.9 0.00065 2.2E-08 66.7 4.9 63 586-649 21-90 (188)
88 2oda_A Hypothetical protein ps 96.9 0.00089 3.1E-08 66.4 5.8 58 589-647 4-71 (196)
89 2c4n_A Protein NAGD; nucleotid 96.9 0.00047 1.6E-08 69.2 3.8 53 591-648 3-58 (250)
90 2gmw_A D,D-heptose 1,7-bisphos 96.8 0.00086 2.9E-08 67.1 5.0 59 590-649 24-102 (211)
91 2ho4_A Haloacid dehalogenase-l 96.7 0.0014 4.7E-08 66.8 5.7 54 590-648 6-62 (259)
92 2hx1_A Predicted sugar phospha 96.7 0.0009 3.1E-08 69.9 3.8 55 590-649 13-70 (284)
93 1y8a_A Hypothetical protein AF 96.6 2.6E-05 8.8E-10 84.1 -9.2 67 588-664 18-93 (332)
94 3ewi_A N-acylneuraminate cytid 96.5 0.0016 5.5E-08 63.1 4.5 58 587-647 5-69 (168)
95 3n07_A 3-deoxy-D-manno-octulos 96.5 0.00065 2.2E-08 67.5 1.6 61 588-649 22-89 (195)
96 3mmz_A Putative HAD family hyd 96.5 0.00066 2.2E-08 66.0 1.2 59 590-649 11-76 (176)
97 1yv9_A Hydrolase, haloacid deh 96.4 0.0016 5.5E-08 66.9 3.9 68 590-662 4-79 (264)
98 3ib6_A Uncharacterized protein 96.3 0.0032 1.1E-07 61.6 5.0 58 591-649 3-74 (189)
99 3nvb_A Uncharacterized protein 96.3 0.0027 9.2E-08 69.5 4.7 70 578-648 209-292 (387)
100 2o2x_A Hypothetical protein; s 96.2 0.0017 5.9E-08 65.0 2.7 59 590-649 30-108 (218)
101 3mn1_A Probable YRBI family ph 96.2 0.0016 5.6E-08 64.0 2.4 60 589-649 17-83 (189)
102 2b82_A APHA, class B acid phos 96.2 0.0016 5.5E-08 65.4 2.1 63 578-641 24-117 (211)
103 3kd3_A Phosphoserine phosphohy 95.9 0.0058 2E-07 59.7 4.8 32 746-777 137-168 (219)
104 2fpr_A Histidine biosynthesis 95.8 0.0048 1.7E-07 59.8 3.7 49 588-637 11-67 (176)
105 3fvv_A Uncharacterized protein 95.7 0.013 4.5E-07 58.4 6.6 36 613-649 94-129 (232)
106 3ia7_A CALG4; glycosysltransfe 95.6 0.029 1E-06 60.7 9.2 101 412-541 283-394 (402)
107 2yjn_A ERYCIII, glycosyltransf 95.5 0.048 1.6E-06 60.4 10.9 146 334-538 268-428 (441)
108 1l7m_A Phosphoserine phosphata 95.5 0.0068 2.3E-07 59.0 3.3 37 612-649 77-113 (211)
109 2i7d_A 5'(3')-deoxyribonucleot 95.4 0.0071 2.4E-07 59.1 3.1 36 612-647 74-109 (193)
110 3rsc_A CALG2; TDP, enediyne, s 95.3 0.053 1.8E-06 59.2 10.1 100 412-540 299-408 (415)
111 3ij5_A 3-deoxy-D-manno-octulos 95.2 0.015 5.1E-07 58.3 4.9 60 589-649 47-113 (211)
112 3pct_A Class C acid phosphatas 95.2 0.0065 2.2E-07 62.9 2.1 59 590-649 57-142 (260)
113 2no4_A (S)-2-haloacid dehaloge 95.1 0.0099 3.4E-07 59.7 3.2 35 614-649 108-142 (240)
114 3ocu_A Lipoprotein E; hydrolas 94.9 0.0075 2.6E-07 62.5 1.8 60 589-649 56-142 (262)
115 3oti_A CALG3; calicheamicin, T 94.8 0.094 3.2E-06 57.0 10.3 148 333-540 232-392 (398)
116 3m9l_A Hydrolase, haloacid deh 94.4 0.016 5.6E-07 56.5 2.8 36 613-649 72-107 (205)
117 3um9_A Haloacid dehalogenase, 94.3 0.037 1.3E-06 54.5 5.0 35 613-648 98-132 (230)
118 2hcf_A Hydrolase, haloacid deh 94.2 0.017 5.8E-07 57.2 2.3 55 591-648 4-60 (234)
119 3zvl_A Bifunctional polynucleo 94.2 0.026 8.7E-07 62.7 3.9 48 590-638 57-113 (416)
120 3nuq_A Protein SSM1, putative 94.1 0.075 2.6E-06 54.7 7.2 36 612-648 143-180 (282)
121 4eze_A Haloacid dehalogenase-l 94.0 0.037 1.3E-06 59.0 4.7 37 612-649 180-216 (317)
122 3kc2_A Uncharacterized protein 93.9 0.03 1E-06 60.7 3.8 53 589-646 11-66 (352)
123 3skx_A Copper-exporting P-type 93.9 0.046 1.6E-06 55.9 5.0 37 612-649 145-181 (280)
124 3m1y_A Phosphoserine phosphata 93.8 0.03 1E-06 54.8 3.2 37 612-649 76-112 (217)
125 1zrn_A L-2-haloacid dehalogena 93.6 0.024 8.3E-07 56.2 2.1 35 614-649 98-132 (232)
126 2pke_A Haloacid delahogenase-l 93.3 0.022 7.5E-07 57.6 1.3 51 591-645 13-78 (251)
127 3kzx_A HAD-superfamily hydrola 93.2 0.038 1.3E-06 54.7 2.8 49 590-642 24-73 (231)
128 2pib_A Phosphorylated carbohyd 93.1 0.075 2.6E-06 51.3 4.8 35 614-649 87-121 (216)
129 3umb_A Dehalogenase-like hydro 93.0 0.053 1.8E-06 53.6 3.5 35 614-649 102-136 (233)
130 2b0c_A Putative phosphatase; a 92.8 0.029 9.8E-07 54.5 1.2 30 613-643 93-122 (206)
131 1nnl_A L-3-phosphoserine phosp 92.7 0.047 1.6E-06 54.1 2.7 36 613-649 88-123 (225)
132 1qq5_A Protein (L-2-haloacid d 92.7 0.074 2.5E-06 53.8 4.3 33 614-649 96-128 (253)
133 3iru_A Phoshonoacetaldehyde hy 92.7 0.098 3.4E-06 53.0 5.1 34 614-648 114-147 (277)
134 1iir_A Glycosyltransferase GTF 92.2 0.72 2.5E-05 50.3 11.7 137 333-530 238-384 (415)
135 3vay_A HAD-superfamily hydrola 92.2 0.01 3.4E-07 58.8 -3.1 53 591-647 2-54 (230)
136 2w43_A Hypothetical 2-haloalka 92.0 0.037 1.3E-06 53.8 0.8 33 614-649 77-109 (201)
137 3kbb_A Phosphorylated carbohyd 91.6 0.14 4.6E-06 50.2 4.5 36 613-649 86-121 (216)
138 2iya_A OLEI, oleandomycin glyc 91.5 0.93 3.2E-05 49.5 11.6 101 412-541 307-416 (424)
139 2wf7_A Beta-PGM, beta-phosphog 91.1 0.017 5.7E-07 56.6 -2.8 48 591-641 2-51 (221)
140 3p96_A Phosphoserine phosphata 90.5 0.12 4.1E-06 57.0 3.1 37 612-649 257-293 (415)
141 3d6j_A Putative haloacid dehal 90.4 0.03 1E-06 54.7 -1.6 25 753-777 142-166 (225)
142 4dcc_A Putative haloacid dehal 90.3 0.32 1.1E-05 48.1 5.8 33 612-646 113-145 (229)
143 3a1c_A Probable copper-exporti 90.2 0.18 6.2E-06 52.4 4.1 70 579-649 131-200 (287)
144 4gyw_A UDP-N-acetylglucosamine 90.2 1.3 4.6E-05 52.4 12.0 175 333-551 522-709 (723)
145 1swv_A Phosphonoacetaldehyde h 89.5 0.17 5.8E-06 51.3 3.0 29 752-780 156-186 (267)
146 2fea_A 2-hydroxy-3-keto-5-meth 89.2 0.18 6E-06 50.6 2.9 36 613-649 79-114 (236)
147 3ddh_A Putative haloacid dehal 89.1 0.093 3.2E-06 51.4 0.7 33 591-626 8-40 (234)
148 4ap9_A Phosphoserine phosphata 89.0 0.19 6.4E-06 48.1 2.9 37 611-649 79-115 (201)
149 1rrv_A Glycosyltransferase GTF 88.8 1.3 4.3E-05 48.4 9.7 137 333-530 237-385 (416)
150 2fi1_A Hydrolase, haloacid deh 88.3 0.09 3.1E-06 50.1 0.0 27 753-780 134-160 (190)
151 3h4t_A Glycosyltransferase GTF 88.2 6.1 0.00021 42.8 14.7 138 332-530 220-367 (404)
152 3u26_A PF00702 domain protein; 88.1 0.049 1.7E-06 53.8 -2.1 25 754-778 153-177 (234)
153 4ex6_A ALNB; modified rossman 88.1 0.11 3.8E-06 51.4 0.5 27 752-778 156-182 (237)
154 2qlt_A (DL)-glycerol-3-phospha 87.8 0.027 9.4E-07 58.1 -4.4 26 753-778 167-199 (275)
155 2go7_A Hydrolase, haloacid deh 87.5 0.099 3.4E-06 50.0 -0.3 30 591-623 4-33 (207)
156 1te2_A Putative phosphatase; s 87.2 0.13 4.3E-06 50.2 0.3 48 591-641 9-58 (226)
157 2fdr_A Conserved hypothetical 87.0 0.14 4.8E-06 50.2 0.5 26 753-778 138-165 (229)
158 2om6_A Probable phosphoserine 86.9 0.12 4E-06 50.9 -0.2 23 755-777 157-179 (235)
159 2hhl_A CTD small phosphatase-l 86.6 0.39 1.3E-05 47.3 3.5 60 588-649 25-104 (195)
160 3mc1_A Predicted phosphatase, 86.5 0.14 4.7E-06 50.2 0.1 26 752-777 138-163 (226)
161 3nas_A Beta-PGM, beta-phosphog 86.3 0.14 4.7E-06 50.6 -0.1 26 753-778 143-168 (233)
162 3ed5_A YFNB; APC60080, bacillu 86.2 0.14 4.8E-06 50.5 0.0 26 753-778 155-181 (238)
163 3qxg_A Inorganic pyrophosphata 86.2 0.16 5.6E-06 50.6 0.5 26 753-778 163-188 (243)
164 3e58_A Putative beta-phosphogl 85.9 0.16 5.4E-06 48.9 0.2 24 754-777 143-166 (214)
165 3umc_A Haloacid dehalogenase; 85.9 0.12 4.1E-06 51.7 -0.7 29 750-778 167-195 (254)
166 3umg_A Haloacid dehalogenase; 85.8 0.15 5.2E-06 50.7 0.0 27 752-778 165-191 (254)
167 3qnm_A Haloacid dehalogenase-l 85.2 0.17 5.8E-06 49.8 0.0 26 753-778 159-184 (240)
168 1ltq_A Polynucleotide kinase; 85.2 0.83 2.8E-05 47.5 5.4 49 591-640 159-216 (301)
169 2ght_A Carboxy-terminal domain 85.0 0.53 1.8E-05 45.7 3.5 60 588-649 12-91 (181)
170 3dv9_A Beta-phosphoglucomutase 84.9 0.19 6.4E-06 49.9 0.2 26 753-778 162-187 (247)
171 3l5k_A Protein GS1, haloacid d 84.3 0.18 6.3E-06 50.5 -0.2 25 753-777 168-194 (250)
172 4eek_A Beta-phosphoglucomutase 84.0 0.18 6.1E-06 50.9 -0.5 24 754-777 166-189 (259)
173 3rfu_A Copper efflux ATPase; a 83.8 0.47 1.6E-05 56.4 2.9 68 581-649 524-591 (736)
174 3i28_A Epoxide hydrolase 2; ar 83.8 0.82 2.8E-05 50.8 4.9 32 613-645 102-139 (555)
175 3s6j_A Hydrolase, haloacid deh 83.7 0.2 6.9E-06 49.1 -0.2 26 753-778 144-169 (233)
176 3cnh_A Hydrolase family protei 83.6 0.59 2E-05 44.8 3.1 22 757-778 142-163 (200)
177 4as2_A Phosphorylcholine phosp 83.4 0.5 1.7E-05 50.4 2.8 35 613-648 145-179 (327)
178 4amg_A Snogd; transferase, pol 83.1 0.79 2.7E-05 49.3 4.3 88 415-532 292-386 (400)
179 3smv_A S-(-)-azetidine-2-carbo 82.8 0.21 7.3E-06 49.0 -0.5 30 590-622 5-34 (240)
180 2hdo_A Phosphoglycolate phosph 82.4 0.22 7.6E-06 48.3 -0.5 23 755-777 135-159 (209)
181 2ah5_A COG0546: predicted phos 82.1 0.26 8.8E-06 48.3 -0.2 26 753-778 134-159 (210)
182 2hoq_A Putative HAD-hydrolase 81.8 0.27 9.2E-06 49.0 -0.2 26 753-778 147-172 (241)
183 3j08_A COPA, copper-exporting 80.9 0.98 3.4E-05 52.8 4.2 68 581-649 427-494 (645)
184 3sd7_A Putative phosphatase; s 80.1 0.32 1.1E-05 48.2 -0.3 27 751-777 161-188 (240)
185 2hi0_A Putative phosphoglycola 78.8 0.36 1.2E-05 48.2 -0.4 26 753-778 162-187 (240)
186 1q92_A 5(3)-deoxyribonucleotid 78.5 0.84 2.9E-05 44.2 2.2 30 589-625 2-31 (197)
187 2hsz_A Novel predicted phospha 78.1 0.42 1.4E-05 47.9 -0.1 21 757-777 171-191 (243)
188 3k1z_A Haloacid dehalogenase-l 78.0 0.68 2.3E-05 47.0 1.4 25 754-778 159-183 (263)
189 3j09_A COPA, copper-exporting 77.8 1.4 4.9E-05 52.1 4.3 69 580-649 504-572 (723)
190 2p11_A Hypothetical protein; p 77.7 0.46 1.6E-05 47.2 0.0 15 590-604 10-24 (231)
191 4fe3_A Cytosolic 5'-nucleotida 77.6 1.2 4.2E-05 46.2 3.3 37 612-649 142-178 (297)
192 2zg6_A Putative uncharacterize 76.4 0.8 2.7E-05 44.9 1.4 14 591-604 3-16 (220)
193 2nyv_A Pgpase, PGP, phosphogly 75.4 0.51 1.7E-05 46.5 -0.4 23 755-777 138-160 (222)
194 4g9b_A Beta-PGM, beta-phosphog 73.7 1.2 4.2E-05 44.6 1.9 15 590-604 4-18 (243)
195 2gfh_A Haloacid dehalogenase-l 73.7 0.69 2.4E-05 47.1 0.1 21 758-778 178-198 (260)
196 2i6x_A Hydrolase, haloacid deh 73.6 0.96 3.3E-05 43.6 1.1 21 757-777 151-171 (211)
197 4gib_A Beta-phosphoglucomutase 73.6 1.4 4.8E-05 44.3 2.4 20 759-778 173-192 (250)
198 3qle_A TIM50P; chaperone, mito 72.8 1.2 4E-05 44.2 1.5 74 572-649 17-95 (204)
199 3bwv_A Putative 5'(3')-deoxyri 70.7 1.3 4.5E-05 42.0 1.3 14 591-604 4-17 (180)
200 3n28_A Phosphoserine phosphata 69.7 1.3 4.6E-05 46.8 1.2 37 612-649 179-215 (335)
201 1rku_A Homoserine kinase; phos 68.3 1.6 5.5E-05 42.0 1.4 35 613-649 71-105 (206)
202 3shq_A UBLCP1; phosphatase, hy 68.0 3.2 0.00011 44.0 3.7 59 589-649 138-200 (320)
203 3n28_A Phosphoserine phosphata 66.6 3.6 0.00012 43.4 3.8 58 610-667 42-116 (335)
204 3ef0_A RNA polymerase II subun 64.2 6.8 0.00023 42.4 5.4 64 584-649 11-111 (372)
205 2g80_A Protein UTR4; YEL038W, 60.0 3.1 0.00011 42.4 1.7 15 590-604 30-44 (253)
206 3ixz_A Potassium-transporting 58.7 7.4 0.00025 48.0 5.0 49 600-649 593-641 (1034)
207 1yns_A E-1 enzyme; hydrolase f 56.9 3.8 0.00013 41.7 1.7 22 757-778 186-209 (261)
208 3a1c_A Probable copper-exporti 56.8 4.3 0.00015 41.8 2.1 17 590-606 31-47 (287)
209 2zxe_A Na, K-ATPase alpha subu 53.2 4.5 0.00015 49.8 1.8 46 610-659 598-643 (1028)
210 1ygp_A Yeast glycogen phosphor 50.4 1.1E+02 0.0037 36.5 12.6 136 332-488 598-747 (879)
211 1psw_A ADP-heptose LPS heptosy 49.8 51 0.0018 34.2 9.3 108 325-456 168-282 (348)
212 1mhs_A Proton pump, plasma mem 43.6 28 0.00096 42.2 6.6 67 582-649 501-572 (920)
213 3b8c_A ATPase 2, plasma membra 36.9 28 0.00097 42.0 5.2 71 578-649 442-525 (885)
214 3hbm_A UDP-sugar hydrolase; PS 33.8 32 0.0011 35.5 4.3 29 422-455 217-245 (282)
215 3gl9_A Response regulator; bet 32.8 1.5E+02 0.0051 25.0 8.2 54 578-642 34-90 (122)
216 3f6p_A Transcriptional regulat 30.3 1.5E+02 0.0052 24.8 7.7 53 578-641 34-86 (120)
217 2c4n_A Protein NAGD; nucleotid 29.4 16 0.00053 35.4 1.0 29 750-778 170-198 (250)
218 3tov_A Glycosyl transferase fa 28.8 2.9E+02 0.0098 28.8 11.1 81 334-437 186-268 (349)
219 2yj3_A Copper-transporting ATP 34.5 12 0.00042 37.9 0.0 55 594-649 119-173 (263)
220 3i42_A Response regulator rece 27.2 1.2E+02 0.0041 25.6 6.5 57 578-642 35-91 (127)
221 4gxt_A A conserved functionall 24.7 31 0.001 37.3 2.4 37 612-649 222-258 (385)
222 3grc_A Sensor protein, kinase; 24.2 2.4E+02 0.0084 24.0 8.1 56 578-641 38-93 (140)
223 3rst_A Signal peptide peptidas 23.7 47 0.0016 33.2 3.4 48 591-638 3-56 (240)
224 1gs5_A Acetylglutamate kinase; 23.7 1.1E+02 0.0038 30.6 6.3 65 582-648 167-249 (258)
225 2zay_A Response regulator rece 22.6 2.5E+02 0.0085 24.2 7.9 53 578-641 40-95 (147)
226 3gt7_A Sensor protein; structu 22.0 2.3E+02 0.0078 24.9 7.6 56 578-641 39-94 (154)
227 2ogx_A Molybdenum storage prot 22.0 3.2E+02 0.011 27.6 9.4 66 581-648 175-262 (276)
228 3nhm_A Response regulator; pro 21.9 2.6E+02 0.009 23.4 7.8 57 578-642 35-91 (133)
229 1z9d_A Uridylate kinase, UK, U 21.6 3.5E+02 0.012 26.7 9.6 75 582-664 149-240 (252)
230 3ar4_A Sarcoplasmic/endoplasmi 21.3 41 0.0014 41.2 2.8 40 609-649 601-640 (995)
231 3psf_A Transcription elongatio 20.4 1.1E+02 0.0036 37.5 6.0 96 561-666 515-631 (1030)
232 3cnb_A DNA-binding response re 20.4 2.9E+02 0.01 23.4 7.8 53 578-641 42-97 (143)
No 1
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=100.00 E-value=4e-108 Score=929.05 Aligned_cols=456 Identities=19% Similarity=0.270 Sum_probs=406.1
Q ss_pred CCcEEEEECCCccceeecCCCCcE---EEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHH---------h
Q 003999 58 RERKIIVANMLPLHAKRDTETGRW---CFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQ---------K 125 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~---------~ 125 (780)
+.++||||||||+.+++++++|+| .++.++|||+++|.+-+ +++||||++.+.+ ++.+.+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~---~~~~~~~~~~~~~~~~ 74 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDD---RRASALNPDGVTMELH 74 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHH---HHHHHHCTTCEEEECT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccc---hhhhhccccccccccc
Confidence 468999999999999987446887 67778999999997544 7899999986422 222221 1
Q ss_pred hccCccEEEeecChHhhhhHhhccccccccccccccCCC--CCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCC-CCCEE
Q 003999 126 LLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPM--CPDHGDRFDRVLWQAYVSANKIFADKVMEVINP-DDDCV 202 (780)
Q Consensus 126 l~~~~~~~pv~l~~~~~~~~y~gf~~~~LWpl~H~~~~~--~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~-~~DiV 202 (780)
..++|+|+||||+++++++||+||||++|||+|||+.+. .|+. .+|+++.|++|++||++||++|++.+++ ++|+|
T Consensus 75 ~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 75 SGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp TSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred cCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 256899999999999999999999999999999998533 3332 3566789999999999999999999952 46999
Q ss_pred EEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCC--ChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhh-Cc
Q 003999 203 WVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML-GL 279 (780)
Q Consensus 203 wvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp--~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l-~~ 279 (780)
||||||||+||+|||+++|+++||||||||||++|+|++|| ||++||+|||+||+|||||++|++||++||+|++ |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 98
Q ss_pred eeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHH
Q 003999 280 DYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359 (780)
Q Consensus 280 ~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~l 359 (780)
++....+ +++++|++++|.++|+|||++.|.+... ++ .+++|++++++++||+|||+|+.|||..+|+|| +|
T Consensus 234 ~~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~l 305 (496)
T 3t5t_A 234 RIDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VL 305 (496)
T ss_dssp EEETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HH
T ss_pred cccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HH
Confidence 8765554 5889999999999999999999987543 11 156888899999999999999999999999999 99
Q ss_pred HHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccC
Q 003999 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV 439 (780)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (780)
++++|+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+|+ +.++.+++.++|++|||||+||+
T Consensus 306 l~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~Sl 380 (496)
T 3t5t_A 306 AARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNST 380 (496)
T ss_dssp HHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCS
T ss_pred HHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcc
Confidence 99999999 999999999999999999999999999999999999975 78876 47899999999999999999999
Q ss_pred CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003999 440 RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQ 518 (780)
Q Consensus 440 rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~ 518 (780)
+||||||++|||||+. ++||+|+|||+|++++| .+|++|||||++++|+||.++|+||++||+
T Consensus 381 rEGfgLv~~EamA~~~----------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~ 444 (496)
T 3t5t_A 381 VDGQNLSTFEAPLVNE----------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRA 444 (496)
T ss_dssp SBSCCSHHHHHHHHCS----------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHH
T ss_pred cccCChhHHHHHHhCC----------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999963 35899999999999999 479999999999999999999999999999
Q ss_pred HHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHh
Q 003999 519 LRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 519 ~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
+|+++++++|++||+.+|+++|+++|..+...
T Consensus 445 ~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 445 EAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999987554
No 2
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=100.00 E-value=2.6e-93 Score=815.12 Aligned_cols=453 Identities=27% Similarity=0.519 Sum_probs=411.8
Q ss_pred CcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecC
Q 003999 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (780)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 138 (780)
+|+||||||||+... + +.++|||+++|.+.+ +..+++||||+|.. ++ +++.+.+.+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~~-----~----~~~~ggl~~~l~~~~-~~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE-----H----AASAGGLAVGILGAL-KAAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHH-HHHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCC-----C----CcCCCcHHHHHHHHH-hhCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 689999999999721 1 356899999998665 45799999999865 22 222233344578999999999
Q ss_pred hHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHH
Q 003999 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (780)
Q Consensus 139 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~ 218 (780)
++++++||+||||++|||+|||+++. ..|+++.|++|+++|+.||++|.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999875 3799999999999999999999999986 59999999999999999999
Q ss_pred hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEE
Q 003999 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (780)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~ 298 (780)
+.++++|+||+|+|||++++|+++|++++|+++++++|+||||+++|+++|+++|+++++.+...+ + .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876542 3 3678899999
Q ss_pred EEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcC
Q 003999 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (780)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (780)
|.++|+|||++.|.+....+++.+ ..++|++++++++|++|||+|+.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987554445544 6788999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCC
Q 003999 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (780)
Q Consensus 379 ~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~ 458 (780)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred ccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.|+++++++|.++|+..|++
T Consensus 378 ------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~ 445 (482)
T 1uqt_A 378 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 445 (482)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 24589999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003999 539 SFAQDLERA 547 (780)
Q Consensus 539 ~~l~~l~~~ 547 (780)
+|+++|+++
T Consensus 446 ~~l~~l~~~ 454 (482)
T 1uqt_A 446 CFISDLKQI 454 (482)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999999876
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.94 E-value=2.9e-25 Score=247.81 Aligned_cols=314 Identities=17% Similarity=0.160 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh---hHhhcCCCh------
Q 003999 177 WQAYVSANKIFADKVMEVI--NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRTLPVR------ 245 (780)
Q Consensus 177 w~~Y~~vN~~fA~~v~~~~--~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~lp~r------ 245 (780)
+..+....+.....+...+ ..+-|+|++|+++..+++.++++. .++|+++++|..++.. ..+..-..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 4444444454444444432 122499999999998888888754 6789999999987631 111111111
Q ss_pred --HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHH
Q 003999 246 --DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATK 323 (780)
Q Consensus 246 --~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~ 323 (780)
......+-.+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh---------------cCCceeecCCCCCchhcCcccccchhhhh
Confidence 22333455799999999987776322 1111 11257899999999998765322233445
Q ss_pred HHHHHHHc--CCCeEEEEecccc-ccCChHHHHHHHHHHHHhC--CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 003999 324 IKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQH--PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 324 ~~~lr~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 398 (780)
...+++++ +++++|+++||+. +.||+..+++|++++.+++ |+++ |+.+|. ++ .++..+++++++
T Consensus 239 ~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~-----g~--~~~~~~l~~~~~ 307 (439)
T 3fro_A 239 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGK-----GD--PELEGWARSLEE 307 (439)
T ss_dssp HHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECC-----CC--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcC-----CC--hhHHHHHHHHHh
Confidence 56777777 3459999999999 9999999999999998766 6655 887763 22 233455666665
Q ss_pred HHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV 478 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (780)
+.+ .++++.+.++.+++.++|+.||++|+||..||||++++|||||| .|+|+
T Consensus 308 ~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-------------------~Pvi~ 359 (439)
T 3fro_A 308 KHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG-------------------AIPIA 359 (439)
T ss_dssp HCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT-------------------CEEEE
T ss_pred hcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC-------------------CCeEE
Confidence 543 25667888999999999999999999999999999999999997 58999
Q ss_pred cCCCCccccC-C-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHH
Q 003999 479 SEFIGCSPSL-S-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 479 Se~~G~~~~l-~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
|..+|..+.+ + .|++++|.|++++|++|.+++++.++.+....++.+++++++++..+++.+++-++++.+
T Consensus 360 s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 360 SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp ESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred cCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 9999888888 3 589999999999999999999954456667777788889889999999999988876543
No 4
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.91 E-value=1.7e-23 Score=242.27 Aligned_cols=294 Identities=17% Similarity=0.152 Sum_probs=199.0
Q ss_pred CCEEEEeCCccchHHHHHHHhc------CCCcEEEEEeCCC-----CChhHh-hcCCCh--------------------H
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIY-RTLPVR--------------------D 246 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~-~~lp~r--------------------~ 246 (780)
+||+|+||||..++|.+++... .+++++|+.|..- |....- ..+|.. .
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4789999999999999998764 3689999999752 211110 001110 1
Q ss_pred HHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC--------c
Q 003999 247 EILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--------P 318 (780)
Q Consensus 247 eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~--------~ 318 (780)
-+-.++..||.|...+..|++..++.-. .|.. ++...+..+|.++|||||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 2345677899999999999887654210 1111 1112244568899999999988763210 0
Q ss_pred h----hHHHHHHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHH
Q 003999 319 A----TATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEA 389 (780)
Q Consensus 319 ~----~~~~~~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l 389 (780)
. .......+++++ ++.++|++|||+++.||+..+++|+++++++++ + |+.+|. ++.. .
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~---G~~~----~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGT---GKKK----F 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECC---BCHH----H
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC--e----EEEEec---cCch----H
Confidence 0 112224455555 467899999999999999999999999976543 2 555553 1222 2
Q ss_pred HHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCC
Q 003999 390 KKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (780)
Q Consensus 390 ~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (780)
..+++.++...+. .|.+. +..+.+++..+|+.||+||+||.+||||++++|||+||
T Consensus 370 ~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G--------------- 425 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRAV-VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG--------------- 425 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEEE-CSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT---------------
T ss_pred HHHHHHHHhhcCC--------ceEEE-EeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC---------------
Confidence 2333444433322 25544 46788999999999999999999999999999999997
Q ss_pred CCCCceEEEcCCCCccccCC---CcE----------EECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHhhHhhhCCHHH
Q 003999 470 SPHTSMLVVSEFIGCSPSLS---GAI----------RVNPWDIDAVADAMTLAINMRD-SEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l~---~al----------~VnP~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~V~~~~~~~ 535 (780)
.|+|+|..+|+.+.+. +|+ +|+|.|++++|+||.++|..-. ++++++.++. .-+.++|.+
T Consensus 426 ----~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~ 499 (536)
T 3vue_A 426 ----TPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKG 499 (536)
T ss_dssp ----CCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHH
T ss_pred ----CCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHH
Confidence 5899999999998883 244 7899999999999999986322 1222222221 124588888
Q ss_pred HHHHHHHHHHH
Q 003999 536 WARSFAQDLER 546 (780)
Q Consensus 536 Wa~~~l~~l~~ 546 (780)
-|+++++-+.+
T Consensus 500 ~A~~y~~ly~~ 510 (536)
T 3vue_A 500 PAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 88887765544
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.90 E-value=8.9e-24 Score=241.81 Aligned_cols=303 Identities=14% Similarity=0.021 Sum_probs=211.9
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhH-hhcC----C---------ChHHH-HHhhhcCCEEEeecHH
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI-YRTL----P---------VRDEI-LRGLLNCDLIGFHTFD 264 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-~~~l----p---------~r~ei-l~~ll~~Dligf~t~~ 264 (780)
|+||+|+++..+++.++.+. .++|+++++|..++.... +... | .+..+ ...+-.+|.|.+.+..
T Consensus 122 Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 122 QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHH
T ss_pred CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHH
Confidence 89999998766666666554 368899999987542110 0000 0 00111 1223468999988876
Q ss_pred HHHHHHHHHHhhhC-ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--------CCCe
Q 003999 265 YARHFLSCCSRMLG-LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--------DGKK 335 (780)
Q Consensus 265 y~~~Fl~~~~r~l~-~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--------~~~~ 335 (780)
.++.+.+. ..+| .... ....++.++|+|||.+.|.+.. .......+++++ .+++
T Consensus 201 ~~~~~~~~--~~~g~~~~~-----------~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 201 ERFGQYSH--DLYRGAVNV-----------EDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHTTTS--GGGTTTCCT-----------TCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHhh--hcccccccc-----------cCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhcccccccCCCCc
Confidence 55544321 0012 1000 0122578899999998886531 112234455554 3788
Q ss_pred EEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCCh-------hHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 336 LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSG-------KDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 336 vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-------~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+|++|||+++.||+..+++|+..+.+++|+. +.|+++|... +.. ....++.+++++++++.+..
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----- 334 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----- 334 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-----
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-----
Confidence 9999999999999999999999998776653 3466565411 110 11223456777777665422
Q ss_pred cccEEEecCCCCHHHHHHHHHhc----ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC 484 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (780)
..|++ .|.++.+++.++|+.| |++|+||..||||++++|||||| .|+|+|..+|.
T Consensus 335 -~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G-------------------~PvI~s~~~g~ 393 (499)
T 2r60_A 335 -GKVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG-------------------LPAVVTRNGGP 393 (499)
T ss_dssp -TTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT-------------------CCEEEESSBHH
T ss_pred -ceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC-------------------CCEEEecCCCH
Confidence 12665 4689999999999999 99999999999999999999997 48999998888
Q ss_pred cccCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHHHHHhh
Q 003999 485 SPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 485 ~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
.+.+. .|++++|.|++++|++|.++++.+ +.+....++.++++.+ +++...++.+++-++++....
T Consensus 394 ~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 394 AEILDGGKYGVLVDPEDPEDIARGLLKAFESE-ETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HHHTGGGTSSEEECTTCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCceEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 88883 389999999999999999999965 3466666778888877 999999999999998876653
No 6
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.90 E-value=1.7e-22 Score=222.17 Aligned_cols=286 Identities=16% Similarity=0.174 Sum_probs=210.4
Q ss_pred HHHHcCCCCCEEEEeCCccch-HHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARH 268 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~ 268 (780)
+++..++ |+||+|+...+. +..++++ ....+++++.|...+ .+...+....+++. +-.+|.|.+.+....+.
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 154 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRR 154 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHH
Confidence 3445555 899999876553 3344444 333358889996532 12222333444444 34699999999877666
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
+.+. .+. ..++.++|+|||.+.|.+. .......+++++ +++++|+++||+++
T Consensus 155 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 209 (394)
T 3okp_A 155 FKSA----FGS----------------HPTFEHLPSGVDVKRFTPA-----TPEDKSATRKKLGFTDTTPVIACNSRLVP 209 (394)
T ss_dssp HHHH----HCS----------------SSEEEECCCCBCTTTSCCC-----CHHHHHHHHHHTTCCTTCCEEEEESCSCG
T ss_pred HHHh----cCC----------------CCCeEEecCCcCHHHcCCC-----CchhhHHHHHhcCCCcCceEEEEEecccc
Confidence 6542 121 1267899999999887642 123345677777 35689999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++++.+++|+++ |+.+|. ++..+ ++++++..++ ..|++ .+.++.+++.
T Consensus 210 ~Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~l~~~~~~~~--------~~v~~-~g~~~~~~~~ 267 (394)
T 3okp_A 210 RKGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYES----TLRRLATDVS--------QNVKF-LGRLEYQDMI 267 (394)
T ss_dssp GGCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHH----HHHHHTGGGG--------GGEEE-EESCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHH----HHHHHHhccc--------CeEEE-cCCCCHHHHH
Confidence 9999999999999999999876 877763 33333 3334432221 13664 4689999999
Q ss_pred HHHHhcceeeeccCC-------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECC
Q 003999 426 AYYAVAECCIVNAVR-------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNP 496 (780)
Q Consensus 426 aly~~ADv~vvtS~r-------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP 496 (780)
++|+.||++|+||.. ||||++++|||+|| .|+|+|..+|..+.+. .|++++|
T Consensus 268 ~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~~g~~~~~ 328 (394)
T 3okp_A 268 NTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-------------------VPVIAGTSGGAPETVTPATGLVVEG 328 (394)
T ss_dssp HHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-------------------CCEEECSSTTGGGGCCTTTEEECCT
T ss_pred HHHHhCCEEEecCccccccccccccCcHHHHHHHcC-------------------CCEEEeCCCChHHHHhcCCceEeCC
Confidence 999999999999999 99999999999997 4899999998888883 5899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHHHHH
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACR 549 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~~~~ 549 (780)
.|++++|++|.++++.+ +.++...++.++++.+ +++..+++.+++-+++...
T Consensus 329 ~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 329 SDVDKLSELLIELLDDP-IRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp TCHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999965 3566666778888875 8999999999988876543
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.90 E-value=2.5e-22 Score=228.62 Aligned_cols=299 Identities=18% Similarity=0.128 Sum_probs=205.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh----hHhhc--CCC------------hHHHH-HhhhcCCEEE
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS----EIYRT--LPV------------RDEIL-RGLLNCDLIG 259 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~~~~--lp~------------r~eil-~~ll~~Dlig 259 (780)
-|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++. ...+. ..+..+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEE
Confidence 49999999998888888874456899999999875421 11111 010 01122 2345689999
Q ss_pred eecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeE--EEEEEeecCCCchhhhhhcCC-----------chhHHHHHH
Q 003999 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT--VYIKILPVGVHMGRLESVLNL-----------PATATKIKE 326 (780)
Q Consensus 260 f~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~--~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~~ 326 (780)
..+...++.+.+. .+|..... . ...+. .++.++|+|||.+.|.+.... +........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~~---~----~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGMEG---L----LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCHH---H----HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ecCHHHHHHHhcc---ccCcchHH---H----HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 9888766555321 01100000 0 00001 257889999999888653210 011122355
Q ss_pred HHHHcC-----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHh
Q 003999 327 IEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRIN 401 (780)
Q Consensus 327 lr~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In 401 (780)
+++++. ++++|++|||+++.||+..+++|++.+.+ +++ .|+++|. |+. ++++++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~~--~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGG----QLALLGA-----GDP--VLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTC----EEEEEEE-----ECH--HHHHHHHHHHHHST
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCc----EEEEEeC-----Cch--HHHHHHHHHHHhCC
Confidence 677762 67899999999999999999999999876 344 4887774 221 24456666666542
Q ss_pred hccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC
Q 003999 402 EVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481 (780)
Q Consensus 402 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (780)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||||| .|+|+|..
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G-------------------~PvI~s~~ 398 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG-------------------TLPLVRRT 398 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT-------------------CEEEEESS
T ss_pred --------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCC-------------------CCEEECCC
Confidence 137656666 78888999999999999999999999999999997 58999999
Q ss_pred CCccccCC------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 482 IGCSPSLS------------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 482 ~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
+|..+.+. .|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++.+++-+++.
T Consensus 399 gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 399 GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 88888873 4799999999999999999994 233334443344443 7799999999998888776
Q ss_pred HHh
Q 003999 548 CRD 550 (780)
Q Consensus 548 ~~~ 550 (780)
..+
T Consensus 477 ~~~ 479 (485)
T 2qzs_A 477 KLE 479 (485)
T ss_dssp C--
T ss_pred hhh
Confidence 444
No 8
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.90 E-value=8.9e-23 Score=228.69 Aligned_cols=293 Identities=15% Similarity=0.148 Sum_probs=210.2
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhH-hhcC----C-ChHHHHH-hhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI-YRTL----P-VRDEILR-GLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-~~~l----p-~r~eil~-~ll~~Dligf~t~~y~~~Fl~ 271 (780)
-|+|++|++...+++.++.+. .++++++++|..++.... +... + .+..+.+ .+-.+|.|.+.+....+.+.+
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH
Confidence 399999987665555555554 378999999987532110 0000 0 0111222 234699999999877666643
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
.+|.. ..++.++|+|||.+.|.+.. ......+++++ .++++|+++||+.+.||
T Consensus 202 ----~~g~~---------------~~k~~vi~ngvd~~~~~~~~-----~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 202 ----HYDAD---------------PDRISVVSPGADVELYSPGN-----DRATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp ----HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred ----HhCCC---------------hhheEEecCCccccccCCcc-----cchhhhhHHhcCCCCCCcEEEEEeeecccCC
Confidence 12321 12477899999998876431 11123356666 47889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|++.+.+++|+. ++.|+++|.+. ..++. .+++++++++.+.. ..|. +.+.++.+++.++|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~-~~g~~----~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPS-GPNAT----PDTYRHMAEELGVE------KRIR-FLDPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEE-EECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCCcH----HHHHHHHHHHcCCC------CcEE-EcCCCChHHHHHHH
Confidence 999999999999998842 25588777532 11222 33455555554321 1365 45789999999999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++|++
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 384 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASG-------------------TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADA 384 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTT-------------------CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHH
T ss_pred HhCCEEEECccccCCchHHHHHHHcC-------------------CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHH
Confidence 99999999999999999999999997 4899999988888883 3899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHh
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
|.++++.++ .+....++.++++.++++...++.+++-++++...
T Consensus 385 i~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 385 LATLLDDDE-TRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 999999643 45555677888888899999999999998887664
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.90 E-value=3.6e-22 Score=227.34 Aligned_cols=296 Identities=17% Similarity=0.172 Sum_probs=205.4
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCcEEEEEeCCCCCh----hHhhc--CCC------------hHHHHH-hhhcCCEE
Q 003999 199 DDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPSS----EIYRT--LPV------------RDEILR-GLLNCDLI 258 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~~~~--lp~------------r~eil~-~ll~~Dli 258 (780)
-|+||+|+++..+++.++++. ..++|+++++|..++.. ..+.. +|. ...+.+ .+..+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEE
Confidence 399999999888888888764 36789999999876421 11111 110 011222 34568999
Q ss_pred EeecHHHHHHHHHHHHhhhC--ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC-----------chhHHHHH
Q 003999 259 GFHTFDYARHFLSCCSRMLG--LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL-----------PATATKIK 325 (780)
Q Consensus 259 gf~t~~y~~~Fl~~~~r~l~--~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~ 325 (780)
...+....+.+.+. ..| ++.. +.....++.++|+|||.+.|.+.... +.......
T Consensus 211 i~~S~~~~~~~~~~---~~g~~~~~~---------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 1rzu_A 211 STVSPSYAEEILTA---EFGMGLEGV---------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278 (485)
T ss_dssp EESCHHHHHHTTSH---HHHTTCHHH---------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred EecCHhHHHHHhcc---ccCcchHHH---------HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHH
Confidence 99888766655321 011 0000 00011247889999999888653210 01112234
Q ss_pred HHHHHcC---C-CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHh
Q 003999 326 EIEKQFD---G-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRIN 401 (780)
Q Consensus 326 ~lr~~~~---~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In 401 (780)
.+++++. + +++|++|||+++.||+..+++|+.++.+ +++ .|+++|. ++. ++++++++++.+.+
T Consensus 279 ~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~~--~~~~~l~~~~~~~~ 345 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGG----RLVVLGA-----GDV--ALEGALLAAASRHH 345 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTC----EEEEEEC-----BCH--HHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCc----eEEEEeC-----Cch--HHHHHHHHHHHhCC
Confidence 5677662 2 6799999999999999999999999876 344 4887873 221 24456666666542
Q ss_pred hccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC
Q 003999 402 EVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481 (780)
Q Consensus 402 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (780)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||||| .|+|+|..
T Consensus 346 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G-------------------~PvI~s~~ 397 (485)
T 1rzu_A 346 --------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG-------------------CIPVVART 397 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT-------------------CEEEEESS
T ss_pred --------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC-------------------CCEEEeCC
Confidence 137756666 78888999999999999999999999999999997 58999999
Q ss_pred CCccccCC------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 482 IGCSPSLS------------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 482 ~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
+|..+.+. .|++++|.|++++|++|.++++ ..++.+....++.++ ..+++...++.+++-++++
T Consensus 398 gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 398 GGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHH
T ss_pred CChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHh
Confidence 99888883 3799999999999999999994 233344444444443 6799999999998877766
Q ss_pred HH
Q 003999 548 CR 549 (780)
Q Consensus 548 ~~ 549 (780)
..
T Consensus 476 ~~ 477 (485)
T 1rzu_A 476 IS 477 (485)
T ss_dssp TC
T ss_pred hC
Confidence 43
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.90 E-value=8e-23 Score=227.92 Aligned_cols=298 Identities=17% Similarity=0.169 Sum_probs=206.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh--hHhhcCCChHHHHHh
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYRTLPVRDEILRG 251 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~~~lp~r~eil~~ 251 (780)
...|..|....+.+++.+ +..++ |+|++|+++...+..++++ ..|++++.|..++.. ..+ ..+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~~~~------~~~~~~ 172 (416)
T 2x6q_A 105 EEMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNREFW------EFLRRF 172 (416)
T ss_dssp HHHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccHHHH------HHHHHH
Confidence 344555554444443322 33344 9999999987766555543 278999999887542 111 111222
Q ss_pred hhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc
Q 003999 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (780)
Q Consensus 252 ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~ 331 (780)
+..+|.+.+.+.++.+.. +. ..++.++|+|||+..+..... .......+++++
T Consensus 173 ~~~~~~~i~~~s~~~~~~----------------------~~--~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~ 225 (416)
T 2x6q_A 173 VEKYDRYIFHLPEYVQPE----------------------LD--RNKAVIMPPSIDPLSEKNVEL---KQTEILRILERF 225 (416)
T ss_dssp HTTSSEEEESSGGGSCTT----------------------SC--TTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHT
T ss_pred HHhCCEEEEechHHHHhh----------------------CC--ccceEEeCCCCChhhhccccc---ChhhHHHHHHHh
Confidence 334565554443322110 01 024678999999877654211 123345677777
Q ss_pred ---CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 332 ---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 332 ---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+++++|+++||+++.||+..+++|++.+.+++|+++ |+++|.... ..++ ....+++++++.+..
T Consensus 226 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~~~---~~~~l~~~~~~~~~~----- 292 (416)
T 2x6q_A 226 DVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DDPE---GWIYFEKTLRKIGED----- 292 (416)
T ss_dssp TCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TCHH---HHHHHHHHHHHHTTC-----
T ss_pred CCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCcc-cchh---HHHHHHHHHHHhCCC-----
Confidence 467899999999999999999999999999999876 887875321 1122 234455666655431
Q ss_pred cccEEEec--CCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc
Q 003999 409 YEPVVLID--RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP 486 (780)
Q Consensus 409 ~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (780)
..|++++ ..++.+++.++|+.||++|+||..||||++++|||||| .|+|+|..+|..+
T Consensus 293 -~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G-------------------~PvI~~~~~g~~e 352 (416)
T 2x6q_A 293 -YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG-------------------KPVIGRAVGGIKF 352 (416)
T ss_dssp -TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTT-------------------CCEEEESCHHHHH
T ss_pred -CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcC-------------------CCEEEccCCCChh
Confidence 1377653 24568899999999999999999999999999999997 4899999988888
Q ss_pred cCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHHHHHHH
Q 003999 487 SLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLER 546 (780)
Q Consensus 487 ~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l~~ 546 (780)
.+. .|++++ |++++|++|.++++.++ .++...++.++++. .+++...++.+++-+++
T Consensus 353 ~i~~~~~g~l~~--d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 353 QIVDGETGFLVR--DANEAVEVVLYLLKHPE-VSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HCCBTTTEEEES--SHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred heecCCCeEEEC--CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 873 488887 99999999999999653 45555666788875 68999999988876654
No 11
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.89 E-value=2.7e-22 Score=223.19 Aligned_cols=287 Identities=13% Similarity=0.129 Sum_probs=203.3
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHh-cC-CCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCC--EEEeecHHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKR-FN-RIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCD--LIGFHTFDYARH 268 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~D--ligf~t~~y~~~ 268 (780)
+..+| |+|++|.+...+.+.+.+.. .| ..++...+|...+.. +..+-..+-.+| .|.+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI--------RENLWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSC--------CGGGGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhh--------HHHHHHHHhccCCceEEEcCHHHHHH
Confidence 34456 89999954443333333222 22 345666666554321 111222233577 888888766655
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---C--CCeEEEEeccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---D--GKKLILGIDDM 343 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~--~~~vil~Vdrl 343 (780)
+.+ +|. ..++.++|+|||.+.|.. .++++ + ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCC
Confidence 543 232 125789999999987721 22333 2 68899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
++.||+..+++|+.++.+++|+++ |+.+|...... ..++++++++++++.+..-.-.-+..|+++.|.++.++
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~---~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHES---KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTC---SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccc---hhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 999999999999999999999987 87787543211 11244566666665532200000002577889999999
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCC-------------
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG------------- 490 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~------------- 490 (780)
+.++|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+.+
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G-------------------~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLG-------------------KPLIISAVGGADDYFSGDCVYKIKPSAWIS 327 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTT-------------------CCEEEECCHHHHHHSCTTTSEEECCCEEEE
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcC-------------------CCEEEcCCCChHHHHccCcccccccccccc
Confidence 9999999999999999999999999999997 48999999998888742
Q ss_pred -----cE--EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHHhh
Q 003999 491 -----AI--RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 491 -----al--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
|+ +++|.|++++|++| ++++.+ ++++.+.++.++++ ..+++..+++.+++-++++.+..
T Consensus 328 ~~~~~G~~gl~~~~d~~~la~~i-~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 328 VDDRDGIGGIEGIIDVDDLVEAF-TFFKDE-KNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CTTTCSSCCEEEECCHHHHHHHH-HHTTSH-HHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccCcceeeCCCCHHHHHHHH-HHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 999854 45666667788888 46899999999999998876543
No 12
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.89 E-value=7.6e-22 Score=218.37 Aligned_cols=283 Identities=13% Similarity=0.140 Sum_probs=200.2
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHH-hcC-CCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRK-RFN-RIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARH 268 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~-~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~ 268 (780)
++..+| |+|++|..+...++.++.+ ... ++|+++++|...+ ..+..-+....+.+. +-.+|.|...+....+.
T Consensus 95 l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 170 (394)
T 2jjm_A 95 AQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINE 170 (394)
T ss_dssp HHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHH
T ss_pred HHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 344566 8999998765544444433 332 6899999997422 111112222333333 44699999998876665
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
+.+. .+. ..++.++|+|||.+.|.+.. ...+++++ +++++|+++||+.+
T Consensus 171 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~ 222 (394)
T 2jjm_A 171 THEL----VKP----------------NKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRK 222 (394)
T ss_dssp HHHH----TCC----------------SSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCG
T ss_pred HHHh----hCC----------------cccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeecccc
Confidence 5431 221 12578899999998876431 12345555 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++.+.++ ++++ |+++|. +++.+ ++++++++.+.. ..|.+.+ . .+++.
T Consensus 223 ~Kg~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~~g-~--~~~~~ 279 (394)
T 2jjm_A 223 VKRVQDVVQAFAKIVTE-VDAK----LLLVGD-----GPEFC----TILQLVKNLHIE------DRVLFLG-K--QDNVA 279 (394)
T ss_dssp GGTHHHHHHHHHHHHHS-SCCE----EEEECC-----CTTHH----HHHHHHHTTTCG------GGBCCCB-S--CSCTH
T ss_pred ccCHHHHHHHHHHHHhh-CCCE----EEEECC-----chHHH----HHHHHHHHcCCC------CeEEEeC-c--hhhHH
Confidence 99999999999998776 4444 777763 34333 344444443211 1255443 3 57899
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (780)
.+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~~~~EAma~G-------------------~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~l 340 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGLVLLEAMACG-------------------VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGV 340 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCHHHHHHHHTT-------------------CCEEEECCTTSTTTCCBTTTEEEECTTCHHHH
T ss_pred HHHHhCCEEEeccccCCCchHHHHHHhcC-------------------CCEEEecCCChHHHhhcCCceEEeCCCCHHHH
Confidence 99999999999999999999999999997 4899999999888883 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
|++|.++++.+ +.+....++.++++ ..+++...++.+++-++++.+
T Consensus 341 a~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 341 ADQAIQLLKDE-ELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHCH-HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99999999964 34566667788888 789999999999988877543
No 13
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.89 E-value=5.4e-21 Score=220.37 Aligned_cols=310 Identities=15% Similarity=0.119 Sum_probs=202.6
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCC----C----CChhHhhcCC--------------ChHHHHH-hhhcCC
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSP----F----PSSEIYRTLP--------------VRDEILR-GLLNCD 256 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~P----f----P~~e~~~~lp--------------~r~eil~-~ll~~D 256 (780)
|++|.||||..++|.+||++.++++.+|+.|.- + -..+++..+. ..-.+++ ++..||
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999975 1 1112222121 1122333 355789
Q ss_pred EEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCc-hhHHHHHHH----HHHc
Q 003999 257 LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLP-ATATKIKEI----EKQF 331 (780)
Q Consensus 257 ligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-~~~~~~~~l----r~~~ 331 (780)
.|...+..|++.-. .+++.. ...| +|||||.+.|.+..... ......+++ +..+
T Consensus 263 ~ITTVS~~yA~Ei~----~Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~ 321 (725)
T 3nb0_A 263 VFTTVSQITAFEAE----HLLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321 (725)
T ss_dssp EEEESSHHHHHHHH----HHTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHH----HHhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhc
Confidence 99999888876543 344321 1123 99999999987631000 011111223 3322
Q ss_pred -------CCCeEEEE-ecccc-ccCChHHHHHHHHHHHHh--CCCCCCceEEEEEEcCCCCChhHH-----HHHHHHHHH
Q 003999 332 -------DGKKLILG-IDDMD-IFKGISLKLLAMEQLLQQ--HPGMRGKVVLVQIVNPARGSGKDV-----QEAKKETYL 395 (780)
Q Consensus 332 -------~~~~vil~-Vdrld-~~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~-----~~l~~ei~~ 395 (780)
.+++++++ ++|++ ..||++.+++|+.++... ..+..-.||- .|..|+...+... +.+.+++.+
T Consensus 322 ~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vva-fii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVA-FIVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEE-EEECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEE-EEEeCCCCCCCchhhhcchhHHHHHHH
Confidence 25677776 79999 579999999999998643 1122222333 3445665433211 111111221
Q ss_pred HHH-----------------------------------------------------------------------------
Q 003999 396 TAK----------------------------------------------------------------------------- 398 (780)
Q Consensus 396 lv~----------------------------------------------------------------------------- 398 (780)
.+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 111
Q ss_pred HHhhccCCCCcccEEEecCCCCHH------HHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCC
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRF------EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPH 472 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~ 472 (780)
+++-.-...+-.+|+|+.+.++.. ++..+|+.||+||+||.+||||++++||||||
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G------------------ 542 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG------------------ 542 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT------------------
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC------------------
Confidence 111100112334578888888776 58999999999999999999999999999997
Q ss_pred CceEEEcCCCCccccC-C---------CcEEEC---CCCHHHHHHHHHHHH----cCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 473 TSMLVVSEFIGCSPSL-S---------GAIRVN---PWDIDAVADAMTLAI----NMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 473 ~g~lV~Se~~G~~~~l-~---------~al~Vn---P~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
.|+|+|..+|+.+.+ + .|++|. |.|+++++++|.++| .+++.++..+.++.++....++|.+
T Consensus 543 -~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~ 621 (725)
T 3nb0_A 543 -VPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKR 621 (725)
T ss_dssp -CCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHH
T ss_pred -CCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 589999999998766 2 378884 567777766666665 4666656555556677778899999
Q ss_pred HHHHHHHHHHHHHHh
Q 003999 536 WARSFAQDLERACRD 550 (780)
Q Consensus 536 Wa~~~l~~l~~~~~~ 550 (780)
-++.+++..+++...
T Consensus 622 iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 622 MGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999888777554
No 14
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.88 E-value=1.9e-22 Score=241.78 Aligned_cols=310 Identities=13% Similarity=0.099 Sum_probs=211.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHH-------------HHhhhcCCEEEeecHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI-------------LRGLLNCDLIGFHTFDY 265 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei-------------l~~ll~~Dligf~t~~y 265 (780)
-|+||.|++...+++.+++++. ++|++++.|...+..-......| +.+ ...+-.||.|...|...
T Consensus 408 PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 408 PDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 3999999877777777777664 78999999976422110000111 011 01355799999888866
Q ss_pred HHHHHHHHHhhhCceeccCCc------e---eEEEEcCeEEEEEEeecCCCchhhhhhcCCch----hHHHHHHH-----
Q 003999 266 ARHFLSCCSRMLGLDYESKRG------H---IGLDYFGRTVYIKILPVGVHMGRLESVLNLPA----TATKIKEI----- 327 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g------~---~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~----~~~~~~~l----- 327 (780)
++.....+ + .+....+ + -++..... ++.++|+|||.+.|.+...... .......+
T Consensus 486 ~~~l~~~~----~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~ 558 (816)
T 3s28_A 486 IAGSKETV----G-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDV 558 (816)
T ss_dssp HHCCSSSC----C-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSC
T ss_pred HHHHHHHH----H-HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchh
Confidence 54321100 0 0100000 0 00111111 6899999999999976432111 01111111
Q ss_pred --HHH-----cCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC--CCChhHHHHHHHHHHHHHH
Q 003999 328 --EKQ-----FDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA--RGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 328 --r~~-----~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~l~~ei~~lv~ 398 (780)
++. -+++++|++|||+++.||+..+++|+.++.+.+|+++ |+++|... .....+..+...++.++++
T Consensus 559 ~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~ 634 (816)
T 3s28_A 559 ENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIE 634 (816)
T ss_dssp CBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHH
Confidence 111 1468899999999999999999999999988777766 88887543 1222334445667777777
Q ss_pred HHhhccCCCCcccEEEec---CCCCHHHHHHHHH-hcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCc
Q 003999 399 RINEVYGSPNYEPVVLID---RPVPRFEKSAYYA-VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g 474 (780)
+.+.. ..|.+++ +.++.+|+..+|+ +|||||+||..||||++++|||||| .
T Consensus 635 ~lgL~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G-------------------~ 689 (816)
T 3s28_A 635 EYKLN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG-------------------L 689 (816)
T ss_dssp HTTCB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT-------------------C
T ss_pred HcCCC------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC-------------------C
Confidence 65432 2366554 2455689999998 6899999999999999999999997 4
Q ss_pred eEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 475 MLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAI----NMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 475 ~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
|+|+|..+|..+.+. .|++|+|.|++++|++|.+++ ..++ .+....++.++++ ..+++..+++++++-.++
T Consensus 690 PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~-~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPS-HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp CEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 899999999998883 489999999999999998877 6654 5666677788888 779999999999887665
Q ss_pred H
Q 003999 547 A 547 (780)
Q Consensus 547 ~ 547 (780)
.
T Consensus 769 ~ 769 (816)
T 3s28_A 769 Y 769 (816)
T ss_dssp H
T ss_pred H
Confidence 4
No 15
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.88 E-value=1.7e-21 Score=215.44 Aligned_cols=278 Identities=13% Similarity=0.085 Sum_probs=208.5
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
++..++ |+|++|.+....+..++.+. .+.++++++|..+|....++.+-..-+ ..+-.+|.+.+.+....+.+.+
T Consensus 103 l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~ 177 (406)
T 2gek_A 103 IAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQME 177 (406)
T ss_dssp HHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHH
Confidence 344455 89999999887765555554 368999999999887543322111111 3345799999999776666543
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccc-cccCCh
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDM-DIFKGI 349 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrl-d~~KGi 349 (780)
. ++. .++ ++|+|+|.+.|.+.... ... +++++|+++||+ .+.||+
T Consensus 178 ~----~~~-----------------~~~-vi~~~v~~~~~~~~~~~-----------~~~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 178 A----LGS-----------------DAV-EIPNGVDVASFADAPLL-----------DGYPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp H----HSS-----------------CEE-ECCCCBCHHHHHTCCCC-----------TTCSCSSCEEEEESCTTSGGGCH
T ss_pred h----cCC-----------------CcE-EecCCCChhhcCCCchh-----------hhccCCCeEEEEEeeeCccccCH
Confidence 1 111 147 89999999888653211 011 256899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|+.++.+++|+++ |+.+|. +++ ++++ ++++++. ..|. +.+.++.+++..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~----~~~~~~~--------~~v~-~~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGR-----GDE-DELR----EQAGDLA--------GHLR-FLGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHH----HHTGGGG--------GGEE-ECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHH----HHHHhcc--------CcEE-EEecCCHHHHHHHHH
Confidence 999999999998888776 777763 333 3333 3333221 1365 467999999999999
Q ss_pred hcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 430 VAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 430 ~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
.||++|+||. .||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|+++++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 342 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAG-------------------TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAA 342 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHT-------------------CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcC-------------------CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHH
Confidence 9999999997 999999999999997 5899999988887773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHh
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
|.++++.++ .+....++.++++..+++...++.+++-+++..+.
T Consensus 343 i~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 343 LIGILEDDQ-LRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHCHH-HHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999999654 45666677888888999999999999888876543
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.83 E-value=9.7e-20 Score=181.99 Aligned_cols=189 Identities=18% Similarity=0.192 Sum_probs=146.6
Q ss_pred eecCCCchhhh--hhcCCchhHHHHHHHHHHc--CCCeEEEEecccc-ccCChHHHHHHHHHHH--HhCCCCCCceEEEE
Q 003999 302 LPVGVHMGRLE--SVLNLPATATKIKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLL--QQHPGMRGKVVLVQ 374 (780)
Q Consensus 302 ~P~GId~~~~~--~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll--~~~P~~~~~vvLvq 374 (780)
+|+|||.+.|. +.. ....+....+++++ +++++|+++||+. +.||+..+++|+..+. +++|+++ |+.
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 68999999997 532 11223345677777 4678999999999 9999999999999997 7777755 877
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|. ++ .+...++++++++.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+||
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 763 22 122345555555443 37753789999999999999999999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
.|+|+|..+|..+.+. .|++++|.|+++++++|.++++|.+++++.+.++.++++.++
T Consensus 140 -------------------~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 -------------------AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp -------------------CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred -------------------CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 5899999988888772 489999999999999999999966666666667777777554
No 17
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.82 E-value=1.1e-19 Score=197.09 Aligned_cols=243 Identities=13% Similarity=-0.016 Sum_probs=182.9
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl 270 (780)
+++..++ |+|++|.++..++. .+..+.+ ++++|..++... .+|.|.+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHh
Confidence 3444555 89999998765432 3345788 899999876421 18888888875554432
Q ss_pred HHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChH
Q 003999 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGIS 350 (780)
Q Consensus 271 ~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~ 350 (780)
+ ..++.++|+|||.+.|.+... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 013567899999988764321 124567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
.+++|++++ +++ |+.+|. +++. .++++++++++ ..|+ +.|.++.+++.++|+.
T Consensus 179 ~li~a~~~~-----~~~----l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~-~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----GRR----LVLAGP-----AWEP----EYFDEITRRYG--------STVE-PIGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----TCC----EEEESC-----CCCH----HHHHHHHHHHT--------TTEE-ECCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----CcE----EEEEeC-----cccH----HHHHHHHHHhC--------CCEE-EeccCCHHHHHHHHHh
Confidence 999999986 444 777763 2332 33444555543 1366 4678999999999999
Q ss_pred cceeeeccC----------CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C----CcEEEC
Q 003999 431 AECCIVNAV----------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S----GAIRVN 495 (780)
Q Consensus 431 ADv~vvtS~----------rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~al~Vn 495 (780)
||++|+||. .||||++++|||+|| .|+|+|..+|..+.+ . .|++++
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~~~~~g~~~~ 292 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSG-------------------TPVVGTGNGCLAEIVPSVGEVVGYGTD 292 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTT-------------------CCEEECCTTTHHHHGGGGEEECCSSSC
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhcC-------------------CCEEEcCCCChHHHhcccCCCceEEcC
Confidence 999999999 899999999999997 489999998888877 3 389999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHH
Q 003999 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
| |++++|++|.++++ .++.++++ ..+++...++.+++-++++.+
T Consensus 293 ~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 293 F-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp C-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 9 99999999999987 23345555 678999999999988887654
No 18
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.81 E-value=1.2e-20 Score=206.26 Aligned_cols=227 Identities=15% Similarity=0.143 Sum_probs=173.7
Q ss_pred cCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--
Q 003999 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (780)
Q Consensus 254 ~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-- 331 (780)
.+|.|.+.+...++.|.+. +|.. ..++.++|+|+|.+.|.+.... .....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 5899999998777776532 2321 1247789999999988764321 1234567777
Q ss_pred -CCCeEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
+++++++++||+.+.||+..+++|++.+.++ +|+++ |+.+|.. +. +++++++++.+..
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~g-----~~-----~~~~~~~~~~~~~------ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTL----LFVVGQD-----KP-----RKFEALAEKLGVR------ 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEE----EEEESSS-----CC-----HHHHHHHHHHTCG------
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceE----EEEEcCC-----CH-----HHHHHHHHHcCCC------
Confidence 4678999999999999999999999988766 46554 8877742 21 2344455444311
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (780)
..|++++ . .+++..+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+
T Consensus 253 ~~v~~~g-~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~ 310 (374)
T 2iw1_A 253 SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG-------------------LPVLTTAVCGYAHYIA 310 (374)
T ss_dssp GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT-------------------CCEEEETTSTTTHHHH
T ss_pred CcEEECC-C--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC-------------------CCEEEecCCCchhhhc
Confidence 1377664 3 5789999999999999999999999999999997 489999999988877
Q ss_pred --CCcEEEC-CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 489 --SGAIRVN-PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 489 --~~al~Vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
..|++++ |.|++++|++|.++++.+ +.++...++.++++.++++..|++.+.+-++.
T Consensus 311 ~~~~g~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 311 DANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred cCCceEEeCCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2589998 999999999999999964 35666667789999999999999988876653
No 19
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=99.77 E-value=1.5e-18 Score=180.00 Aligned_cols=174 Identities=21% Similarity=0.211 Sum_probs=124.4
Q ss_pred ceEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCc
Q 003999 592 RAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~ 669 (780)
|+|++|+||||++... .++.++++++++|++|+++ | .|+|+|||++..+.+++..+ +++|++||++++..+ .
T Consensus 2 kli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~--~ 75 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKING--Q 75 (239)
T ss_dssp CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETT--E
T ss_pred eEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCC--e
Confidence 7999999999998532 2457899999999999996 8 99999999999999999877 789999999998832 3
Q ss_pred eEecCC-CcChhH-HHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCe
Q 003999 670 WETNHL-GADLEW-KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQH 747 (780)
Q Consensus 670 w~~~~~-~~d~~w-k~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~ 747 (780)
+..... .....+ ++.+..+++... ..++.+++.++..+.++|+..++ +.....+++.+.+.+. .++.+.++..
T Consensus 76 ~~~~~~~~~~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~---~~~~~~~~~~ 150 (239)
T 1u02_A 76 IVYNNGSDRFLGVFDRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI---FGVETYYGKM 150 (239)
T ss_dssp EEECTTGGGGHHHHHHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH---HTCEEEECSS
T ss_pred eeecccccccchhhHHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc---CCcEEEeCCc
Confidence 321000 001112 233455554443 35678888888888888887543 2111223333444432 2356778999
Q ss_pred EEEEEeCCCCHHHHHHHHHHHcCCCCCccccCC
Q 003999 748 IVEVKPQVLRPSSISVSLSLSVCVRARACKLDD 780 (780)
Q Consensus 748 ~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~~~~ 780 (780)
++||.|+++|||.|+++|+++++ -+.+||
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~g----via~GD 179 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGERP----AIIAGD 179 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTSC----EEEEES
T ss_pred EEEEEcCCCCHHHHHHHHHhhCC----eEEEeC
Confidence 99999999999999999999998 444554
No 20
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.76 E-value=6.1e-18 Score=163.87 Aligned_cols=161 Identities=10% Similarity=0.016 Sum_probs=120.7
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~ 413 (780)
+.+|+++||+++.||+..+++|+.++ +++|++ .|+.+|. +++.+ ++++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~~----~l~i~G~-----g~~~~----~~~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQDI----VLLLKGK-----GPDEK----KIKLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGGE----EEEEECC-----STTHH----HHHHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCCe----EEEEEeC-----CccHH----HHHHHHHHcCC--------eEE
Confidence 56899999999999999999999986 445554 4887763 34333 34444444432 244
Q ss_pred EecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCc-eEEEcC-CCCccccC-CC
Q 003999 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS-MLVVSE-FIGCSPSL-SG 490 (780)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g-~lV~Se-~~G~~~~l-~~ 490 (780)
+ +.++.+++..+|+.||++|+||..||||++++|||+|| . |+|++. .+|..+.+ ++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G-------------------~vPvi~~~~~~~~~~~~~~~ 118 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG-------------------IVPVIANSPLSATRQFALDE 118 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT-------------------CCEEEECCTTCGGGGGCSSG
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC-------------------CCcEEeeCCCCchhhhccCC
Confidence 5 88999999999999999999999999999999999996 4 777744 44555555 45
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
+.+++|.|+++++++|.++++.+ +.+....++.++++.++++..+++
T Consensus 119 ~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 119 RSLFEPNNAKDLSAKIDWWLENK-LERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp GGEECTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHC------
T ss_pred ceEEcCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHCChhhhhc
Confidence 67999999999999999999954 456666667788888788776654
No 21
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.71 E-value=1.6e-16 Score=178.00 Aligned_cols=160 Identities=6% Similarity=-0.017 Sum_probs=121.8
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccc-cccCChHHHHHHHHHHHHhCCCCCCceEEEEEE
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (780)
.+.++|+|+|.+.|.... ...++++.|++++|+ .+.||+..+++||+.+.+++|+. .++.|+.+|
T Consensus 218 ~~~~i~~g~d~~~~~~~~-------------~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIN-------------DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTT-------------SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhcccc-------------cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 467889999987664210 012456789999996 68999999999999999888861 023488777
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 377 ~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
.... . .+.+.. ..|+| .|.++.+|+.++|+.||+||+||..||||++++||||||
T Consensus 284 ~~~~-~-------------------~~l~~~--~~v~f-~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHK-D-------------------IALGKG--IHLNS-LGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCC-C-------------------EEEETT--EEEEE-EESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCch-h-------------------hhcCCc--CcEEE-cCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 4221 0 011211 23664 568999999999999999999999999999999999997
Q ss_pred CCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.|+|++ .+|+.+.+. +|++|+|.|++++|++|.+++++++
T Consensus 339 -----------------~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 339 -----------------LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -----------------CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred -----------------CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 477774 457766662 4899999999999999999998664
No 22
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.71 E-value=1.8e-16 Score=168.14 Aligned_cols=183 Identities=20% Similarity=0.120 Sum_probs=119.6
Q ss_pred HHHHhccCceEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccE
Q 003999 584 SAYRKTERRAIFLDYDGTVVPETSIIK-SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYF 661 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~~~~~-~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ 661 (780)
.+|...+.|+|+||+||||++ .++ .++++++++|++|++. |+.|+++|||+...+..++..+. ..++|++||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLIDK-GIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 478999999999999999998 555 7999999999999985 99999999999999999988763 45899999999
Q ss_pred EeeCCCCceEecCCCcChhHHHHHHHHHHHHHhc----------CCCceeecccceE--------EEeeccCC-------
Q 003999 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA----------TDGSNIEIKESAL--------VWHHQDAD------- 716 (780)
Q Consensus 662 ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~----------t~gs~iE~k~~~l--------~~hyr~ad------- 716 (780)
+...+...+.. ..+. +.+.++++.+.+. ..+.+++.....+ ...+...+
T Consensus 90 i~~~~~~i~~~---~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTY---PMDE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEEC---CCCH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEe---cCCH---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 99854333332 2342 3355555554433 1122221110000 00000000
Q ss_pred CC------c-ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 717 PD------F-GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 717 ~d------~-~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.. + ......++.+.+.+.+.+ .+. +.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~i 231 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNK-KAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVC 231 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTT-TEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcC-CEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEE
Confidence 00 0 011123334444444443 354 567899999999999999999999999999997764
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.70 E-value=1.3e-16 Score=174.65 Aligned_cols=274 Identities=13% Similarity=0.111 Sum_probs=175.5
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYARH 268 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~~~ 268 (780)
+++..+| |+|++|......++..+..+..++|+.++.|.. .+...+. ++...+++.++ .+|.+...+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 4455677 899999764333333232334578888765543 2211121 33344555544 389998888776665
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecC-CCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEecccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIF 346 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~G-Id~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~ 346 (780)
+.+ .|.. ..++.++|+| +|...+....... .++++++++ +.++++++|+.+.
T Consensus 165 ~~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~ 218 (375)
T 3beo_A 165 LQK-----ENKD---------------ESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENL 218 (375)
T ss_dssp HHH-----TTCC---------------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGT
T ss_pred HHH-----cCCC---------------cccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccc
Confidence 542 2331 1146788999 8877664321000 124455543 4567789999986
Q ss_pred -CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 347 -KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 347 -KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
||+..+++|++++.+++|+++ ++. +. +++ .+++++++++++ . ...|+++ +.++..++.
T Consensus 219 ~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~---~------~~~v~~~-g~~~~~~~~ 277 (375)
T 3beo_A 219 GEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILG---D------YGRIHLI-EPLDVIDFH 277 (375)
T ss_dssp THHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHT---T------CTTEEEE-CCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhh---c------cCCEEEe-CCCCHHHHH
Confidence 999999999999988888764 443 31 111 234444544421 1 0136654 578888999
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC-CCccccC-C-CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL-S-GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l-~-~al~VnP~d~~~~ 502 (780)
.+|+.||++|.|| |.+++|||+|| .|+|+|.. +|..+.+ . .|++|+| |++++
T Consensus 278 ~~~~~ad~~v~~s-----g~~~lEA~a~G-------------------~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~l 332 (375)
T 3beo_A 278 NVAARSYLMLTDS-----GGVQEEAPSLG-------------------VPVLVLRDTTERPEGIEAGTLKLAGT-DEETI 332 (375)
T ss_dssp HHHHTCSEEEECC-----HHHHHHHHHHT-------------------CCEEECSSCCSCHHHHHTTSEEECCS-CHHHH
T ss_pred HHHHhCcEEEECC-----CChHHHHHhcC-------------------CCEEEecCCCCCceeecCCceEEcCC-CHHHH
Confidence 9999999999999 56799999997 48888854 6766655 3 4888887 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
|++|.++++.++ .++.+.++.+++...+++.+.++.+.+
T Consensus 333 a~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 333 FSLADELLSDKE-AHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHCHH-HHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhChH-hHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999998653 344433445666666666665555443
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.69 E-value=4.8e-16 Score=170.76 Aligned_cols=280 Identities=15% Similarity=0.111 Sum_probs=175.2
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh-h-cCCEEEeecHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-L-NCDLIGFHTFDYAR 267 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l-~~Dligf~t~~y~~ 267 (780)
++++..+| |+|++|+.....++..+-.+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34555677 8999998533344444433455788887777432 111111 2223333333 2 38999888877666
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCC-CchhhhhhcCCchhHHHHHHHHHHcC----CC-eEEEEec
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQFD----GK-KLILGID 341 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~----~~-~vil~Vd 341 (780)
.|.+ .|... .++.++|+|+ |...+..... +.......++++++. ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 6542 23321 1356788884 4332221100 000011234556532 34 5788999
Q ss_pred ccccc-CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC
Q 003999 342 DMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (780)
Q Consensus 342 rld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~ 420 (780)
|+.+. ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++. ...|+++ +.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~~-g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNVILI-DPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTEEEE-CCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCEEEe-CCCC
Confidence 99987 999999999999999888765 6544321 22 233444444321 1247654 5778
Q ss_pred HHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC-CCccccC--CCcEEECCC
Q 003999 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL--SGAIRVNPW 497 (780)
Q Consensus 421 ~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~al~VnP~ 497 (780)
.+++..+|+.||++|.|| |.+.+|||+|| .|+|+|.. +|+.+.+ +.|++|+|
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G-------------------~PvI~~~~~~~~~e~v~~g~g~lv~~- 327 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSLG-------------------KPVLVMRDTTERPEAVTAGTVRLVGT- 327 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGGT-------------------CCEEEESSCCSCHHHHHHTSEEEECS-
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHcC-------------------CCEEEccCCCCcchhhhCCceEEeCC-
Confidence 899999999999999999 44589999997 48899987 6666555 35899988
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 498 DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
|++++|++|.++|++++ .++.+.++.+++...+++.+.++.+.+
T Consensus 328 d~~~la~~i~~ll~d~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKDEN-EYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp SHHHHHHHHHHHHHCHH-HHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhChH-HHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 99999999999998653 344444445666656666655554443
No 25
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=99.68 E-value=1.3e-16 Score=166.37 Aligned_cols=179 Identities=16% Similarity=0.110 Sum_probs=118.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc-C--CCceEEecCccEEeeCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-C--EMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-l--~~lgliaenG~~ir~~~ 666 (780)
+.|+|++|+||||++ .++.++++++++|++|++. |+.|+|+|||++..+.+.++. + ...++||+||++++..+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~-g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRARGA-GFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 368999999999999 6778999999999999994 999999999999999888873 1 12478999999999875
Q ss_pred CCceEecCC-CcChhHHHHHHHHHHHHH-----hcCCCceeecccceEEEe--eccCCC----Cccccc-----HHHHHH
Q 003999 667 TSEWETNHL-GADLEWKKIVEPVMRSYT-----EATDGSNIEIKESALVWH--HQDADP----DFGSCQ-----AKELLD 729 (780)
Q Consensus 667 ~~~w~~~~~-~~d~~wk~~v~~i~~~~~-----e~t~gs~iE~k~~~l~~h--yr~ad~----d~~~~q-----a~el~~ 729 (780)
+..|....+ ..+.++...+...++.+. ....+.|++.+...+.+. .+.... .+..+. .+++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 434443211 123333333333333222 124567877766544432 111110 011110 123344
Q ss_pred HHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 730 HLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 730 ~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
.|.+.+.+..+. +.+|..++||.|+|+|||.|+++|++ ++++|
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~----~~~ev 202 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED----DFEEI 202 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT----TCSEE
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc----CcccE
Confidence 455544444465 56899999999999999999999999 55554
No 26
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.68 E-value=2.1e-16 Score=167.68 Aligned_cols=184 Identities=11% Similarity=0.060 Sum_probs=114.5
Q ss_pred HHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEE
Q 003999 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFI 662 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~i 662 (780)
.+|+..+.|+|+||+||||++ ..+.++++++++|++|++. |+.|+|+|||+...+.+++..++ ..++|++||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTAR-GINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTT-TCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 589999999999999999999 6778999999999999984 99999999999999999887653 356899999999
Q ss_pred eeCCCCceEecCCCcChhHHHHHHHHHHHHHhc---------CCCceeecccceEEEee-------ccCCC------Cc-
Q 003999 663 RWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKESALVWHH-------QDADP------DF- 719 (780)
Q Consensus 663 r~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~---------t~gs~iE~k~~~l~~hy-------r~ad~------d~- 719 (780)
....+..... ...+ ++.+.++++.+... ..+.+.......+...+ ...+. ..
T Consensus 90 ~~~~~~~l~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 164 (285)
T 3pgv_A 90 HDSDGQQIFA--HNLD---RDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGIS 164 (285)
T ss_dssp ECTTSCEEEE--CCCC---HHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEE
T ss_pred ECCCCCEEEe--cCCC---HHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCce
Confidence 8654332221 1233 34455555522111 11111111000000000 00000 00
Q ss_pred ------cc-ccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ------GS-CQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ------~~-~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.. ....++.+.+.+.+.. .+. +.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 165 ki~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~i 229 (285)
T 3pgv_A 165 KVFFTCEDHEHLLPLEQAMNARWGD-RVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCI 229 (285)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHGG-GEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhcC-CEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEE
Confidence 00 1123344444443332 244 456789999999999999999999999999997764
No 27
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=99.68 E-value=4.5e-16 Score=163.39 Aligned_cols=183 Identities=19% Similarity=0.182 Sum_probs=111.0
Q ss_pred HHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc----C-CCceEEec
Q 003999 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP----C-EMLGIAAE 657 (780)
Q Consensus 583 ~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~----l-~~lgliae 657 (780)
..+|+..+.|+|++|+||||++ .++.++++++++|++|++ . +.|+|+|||++..+.+.++. + ...++|++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3567888899999999999999 667899999999999987 5 99999999999999888864 1 12468999
Q ss_pred CccEEeeCCCCceEecCC-CcChhHHHHHHHHHHHHHhc--------CCCceeecccceEEEe-e-ccCCCC----ccc-
Q 003999 658 HGYFIRWNKTSEWETNHL-GADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESALVWH-H-QDADPD----FGS- 721 (780)
Q Consensus 658 nG~~ir~~~~~~w~~~~~-~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~~~l~~h-y-r~ad~d----~~~- 721 (780)
||++++..++..|....+ ..+ ++.+.++++...+. .++.+++.+...+.+. + +..+.+ +..
T Consensus 80 NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 156 (262)
T ss_dssp GGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEE
Confidence 999998743222221100 012 34455555443221 2344544333222211 1 111100 000
Q ss_pred ----ccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 722 ----CQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 722 ----~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
....++.+.+.+.+.+..+.+. ++..++||.|+|+|||.|+++| ++++++++
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~gi~~~~v 213 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQDSFDTI 213 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TTSCCSEE
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HCCCHHHE
Confidence 0112233344443333246665 4678999999999999999999 89998765
No 28
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.67 E-value=2.9e-16 Score=175.51 Aligned_cols=239 Identities=10% Similarity=0.015 Sum_probs=157.8
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
|+|+.++.....+..+.|.. +.++.+++|....- ..+...+....+. +.+-.+|.|...+....+.+.
T Consensus 126 DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~-------- 194 (406)
T 2hy7_A 126 DVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAEVV-------- 194 (406)
T ss_dssp SEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCS--------
T ss_pred CEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHHHH--------
Confidence 78884443322222344433 56778888865320 1111112222222 234457777766653221110
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
. .+ ++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.
T Consensus 195 ------------~-~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~ 240 (406)
T 2hy7_A 195 ------------S-RD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVV 240 (406)
T ss_dssp ------------C-ST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHH
T ss_pred ------------h-cC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHH
Confidence 0 12 68899999999988653211 12344899999999999999 555
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+.+++|+++ |+++|. |+ ++ +.|.. ..|++ .|.++.+++.++|+.||++|+||
T Consensus 241 l~~~~~~~~----l~ivG~-----g~------------~~----~~~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps 292 (406)
T 2hy7_A 241 ASKAFPQVT----FHVIGS-----GM------------GR----HPGYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPY 292 (406)
T ss_dssp HHHHCTTEE----EEEESC-----SS------------CC----CTTCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCB
T ss_pred HHHhCCCeE----EEEEeC-----ch------------HH----hcCCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECC
Confidence 666788765 887763 22 11 11211 23665 57899999999999999999999
Q ss_pred CCcCCCcchhhhh-------hcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEE-ECCCCHHHHHHHHHHHH
Q 003999 439 VRDGMNLVPYKYI-------VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIR-VNPWDIDAVADAMTLAI 510 (780)
Q Consensus 439 ~rEGmnLv~~Ea~-------ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~-VnP~d~~~~A~ai~~aL 510 (780)
..||||++.+||| ||| .|+|+|.. ... -.+|++ |+|.|++++|++|.+++
T Consensus 293 ~~E~~~~~~lEAm~Kl~eYla~G-------------------~PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll 350 (406)
T 2hy7_A 293 ASEQVPVYLADSSMKLLQYDFFG-------------------LPAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQAL 350 (406)
T ss_dssp SCSCCCTTHHHHCHHHHHHHHHT-------------------CCEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHH
T ss_pred CcccCchHHHHHHHHHHHHhhCC-------------------CcEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999 997 48888876 111 124888 99999999999999999
Q ss_pred cCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 511 NMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 511 ~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
++++ +++...++|...++++++-
T Consensus 351 ~~~~----------~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 351 EAPR----------VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp HCCC----------CCCSCCCBHHHHHHHHHCG
T ss_pred hCcc----------hhhhhcCCHHHHHHHHHHh
Confidence 9875 1446678888888877643
No 29
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=99.65 E-value=8.5e-16 Score=159.53 Aligned_cols=177 Identities=14% Similarity=0.126 Sum_probs=112.4
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc-C--CCceEEecCccEEeeC
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-C--EMLGIAAEHGYFIRWN 665 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-l--~~lgliaenG~~ir~~ 665 (780)
.+.|+|++|+||||++ .++.++++++++|++|++ . +.|+|+|||++..+.+.++. + ...++|++||++++..
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 4579999999999999 667899999999999988 5 99999999999988888862 2 1236899999999875
Q ss_pred CCCceEecCC-CcChhHHHHHHHHHHHHHh--------cCCCceeecccceEEEee--ccCCC----Ccccc----c-HH
Q 003999 666 KTSEWETNHL-GADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWHH--QDADP----DFGSC----Q-AK 725 (780)
Q Consensus 666 ~~~~w~~~~~-~~d~~wk~~v~~i~~~~~e--------~t~gs~iE~k~~~l~~hy--r~ad~----d~~~~----q-a~ 725 (780)
++..|....+ ..+ ++.+.++++.+.+ ...+.+++.+...+.+.. +.... .+... . ..
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 4333332110 012 2334444443322 123455543332222211 11100 00000 0 12
Q ss_pred HHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 726 ELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
++.+.+.+.+....+.+. ++..++||.|+|+|||.|+++| +|+++++|
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~i~~~~v 204 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---ENDGYKTI 204 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TTSCCSEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hCCCHHHE
Confidence 233344443433346655 5789999999999999999999 89988765
No 30
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.64 E-value=3.5e-15 Score=157.17 Aligned_cols=178 Identities=14% Similarity=0.023 Sum_probs=116.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWN 665 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~ 665 (780)
+.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+.+++..+. ..++|++||+.+...
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 368999999999999 6778999999999999995 99999999999999999887764 367899999999964
Q ss_pred CCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEE----------------eeccCCCCc----------
Q 003999 666 KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW----------------HHQDADPDF---------- 719 (780)
Q Consensus 666 ~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~----------------hyr~ad~d~---------- 719 (780)
....... ....+.+ .+.++++.+.+..-...+........- .+... .++
T Consensus 80 ~~~~~~~-~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k 154 (279)
T 4dw8_A 80 ESKEMMY-ENVLPNE---VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRET-NDFLTDITLPVAK 154 (279)
T ss_dssp TTCCEEE-ECCCCGG---GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEEC-SCHHHHSCSCCSC
T ss_pred CCCeEEE-EecCCHH---HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccH-HHHHHhhcCCceE
Confidence 2222221 1123322 244455544432111111111100000 00000 000
Q ss_pred -----ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -----GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -----~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
......++.+.+.+.+.. .+. +.++..++||.|+++|||.+++++++++|+++++|.
T Consensus 155 i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 217 (279)
T 4dw8_A 155 CLIVGDAGKLIPVESELCIRLQG-KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVI 217 (279)
T ss_dssp EEEESCHHHHHHHHHHHHHHTTT-TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEE
T ss_pred EEEeCCHHHHHHHHHHHHHHhcC-CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 001223344444444433 244 557899999999999999999999999999997764
No 31
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=99.64 E-value=1.6e-15 Score=160.51 Aligned_cols=181 Identities=13% Similarity=0.098 Sum_probs=111.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCC--ceEEecCccEEeeCC-
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM--LGIAAEHGYFIRWNK- 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~--lgliaenG~~ir~~~- 666 (780)
+.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+..++..++. .++|++||++++...
T Consensus 8 ~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 83 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQ 83 (275)
T ss_dssp CCEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTT
T ss_pred CceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCc
Confidence 468999999999998 445566778999999998 4999999999999999999987642 269999999997332
Q ss_pred CC------ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccce-------EEEeecc--C--CCCcc----cccHH
Q 003999 667 TS------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESA-------LVWHHQD--A--DPDFG----SCQAK 725 (780)
Q Consensus 667 ~~------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~-------l~~hyr~--a--d~d~~----~~qa~ 725 (780)
.. .+.. ..+ .+.+..+++.+.+.....+....... ..+.+.. . ..++. -....
T Consensus 84 ~~~~~~~~~~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (275)
T 1xvi_A 84 WQEIDGFPRIIS---GIS---HGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSD 157 (275)
T ss_dssp CTTSTTTTEEEC---SSC---HHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCH
T ss_pred ccccCceEEEec---CCC---HHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCH
Confidence 11 1332 233 23445555443321111111000000 0000000 0 00000 00012
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcC-CCCCc---cccCC
Q 003999 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVC-VRARA---CKLDD 780 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~-i~~~~---~~~~~ 780 (780)
+..+.+.+.+....+.+.++..++||.|+|++||.|++++++.++ +++.+ +.+||
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD 216 (275)
T 1xvi_A 158 ERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGD 216 (275)
T ss_dssp HHHHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEES
T ss_pred HHHHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECC
Confidence 223333333333357777778899999999999999999999999 88865 44444
No 32
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=99.63 E-value=2.8e-15 Score=160.64 Aligned_cols=178 Identities=15% Similarity=0.132 Sum_probs=118.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHH-HHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPE-VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~-~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~ 667 (780)
..|+|+||+||||++ ..+.++++ +.++|++|.+. |+.|+++|||+...+.+++..++ ..++|++||+.+...+.
T Consensus 36 ~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 111 (304)
T 3l7y_A 36 SVKVIATDMDGTFLN---SKGSYDHNRFQRILKQLQER-DIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQ 111 (304)
T ss_dssp CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTE
T ss_pred eeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCE
Confidence 579999999999999 66778888 89999999995 99999999999999999888764 36899999999976543
Q ss_pred CceEecCCCcChhHHHHHHHHHHHHHhcCCCce--eecccceEEE----------------------eeccC-CCCc---
Q 003999 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSN--IEIKESALVW----------------------HHQDA-DPDF--- 719 (780)
Q Consensus 668 ~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~--iE~k~~~l~~----------------------hyr~a-d~d~--- 719 (780)
..+.. ..+ .+.+.++++.+.+..++.. +...+..... .+... ....
T Consensus 112 ~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki 185 (304)
T 3l7y_A 112 SLIEV---FQQ---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKL 185 (304)
T ss_dssp EEEEC---CCC---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEE
T ss_pred EEEEe---cCC---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEE
Confidence 22222 233 3445566666554222211 1111110000 00000 0000
Q ss_pred ----ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ----GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ----~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.....+++.+.+.+.+.+..+. +.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i 248 (304)
T 3l7y_A 186 TLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLM 248 (304)
T ss_dssp EEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 0112344555555434331365 456889999999999999999999999999997764
No 33
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.63 E-value=9.2e-16 Score=150.97 Aligned_cols=141 Identities=16% Similarity=0.157 Sum_probs=111.8
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
.++++|+++||+++.||+..+++|++++ |+++ |+.+|... +.++ +.+++.++..... ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~----l~~~~~~~~~~l~----~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDH----AERYARKIMKIAP----DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTST----HHHHHHHHHHHSC----TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHH----HHHHHHhhhcccC----Cc
Confidence 4678999999999999999999999876 6665 77777422 2122 3334442111111 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-- 489 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (780)
|.++ +.++.+++..+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+.
T Consensus 80 v~~~-g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~e~i~~~ 139 (177)
T 2f9f_A 80 VKFL-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG-------------------KPVIAVNEGGFKETVINE 139 (177)
T ss_dssp EEEE-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT-------------------CCEEEESSHHHHHHCCBT
T ss_pred EEEe-CCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC-------------------CcEEEeCCCCHHHHhcCC
Confidence 6654 68999999999999999999999999999999999997 4899999888887773
Q ss_pred -CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 490 -GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 490 -~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.|+++ |.|+++++++|.+++++++
T Consensus 140 ~~g~~~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 140 KTGYLV-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp TTEEEE-CSCHHHHHHHHHHHHHCTT
T ss_pred CccEEe-CCCHHHHHHHHHHHHhCHH
Confidence 48899 9999999999999999886
No 34
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=99.63 E-value=6.5e-15 Score=155.06 Aligned_cols=176 Identities=13% Similarity=0.126 Sum_probs=118.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHH-HHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEV-ISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~-~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
.|+|++|+||||++ .++.+++++ +++|++|++ .|+.|+|+|||++..+.+++..+. ..++|++||+.++..++.
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (271)
T 1rlm_A 3 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 78 (271)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred ccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeE
Confidence 58999999999999 567889885 999999998 499999999999999998887663 457999999999865332
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcC---------CCceeecccce-----EEEeeccCC--CCc-------------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEAT---------DGSNIEIKESA-----LVWHHQDAD--PDF------------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t---------~gs~iE~k~~~-----l~~hyr~ad--~d~------------- 719 (780)
.+.. ..+ .+.+.++++.+.+.. .+.+....... +...|.... +++
T Consensus 79 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~ 152 (271)
T 1rlm_A 79 LFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 152 (271)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEe---cCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEE
Confidence 2322 233 355666766665431 22232211000 000010000 000
Q ss_pred -ccccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -GSCQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -~~~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....++++.+++.+.+.. .+.+ .++..++||.|++++||.+++++++.+|+++.+|.
T Consensus 153 ~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~ 211 (271)
T 1rlm_A 153 LPDEQIPLVIDKLHVALDG-IMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVV 211 (271)
T ss_dssp CCGGGHHHHHHHHHHHTTT-SSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred cCHHHHHHHHHHHHHHcCC-cEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEE
Confidence 011244555566544433 3554 46788999999999999999999999999997764
No 35
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=99.62 E-value=3.4e-15 Score=158.38 Aligned_cols=176 Identities=13% Similarity=0.121 Sum_probs=111.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCC----ceEEecCccEEeeCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM----LGIAAEHGYFIRWNK 666 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~----lgliaenG~~ir~~~ 666 (780)
.|+|++|+||||++ .++.++++++++|++|.+. |+.|+|+|||++..+..++..++. .++|++||+.++...
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~ 80 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL---PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAA 80 (282)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECC
Confidence 58999999999999 6678999999999999985 999999999999999998876632 258999999998742
Q ss_pred -CC-ceEecCCCcChhHHHHHHHHHHHHHhc--------CCCceeecccc-----------eEEEee---ccC--CCCcc
Q 003999 667 -TS-EWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKES-----------ALVWHH---QDA--DPDFG 720 (780)
Q Consensus 667 -~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~~-----------~l~~hy---r~a--d~d~~ 720 (780)
+. .+.. ..+.++ +.++++...+. ..+.+.+.+.. .+.... ... +.+..
T Consensus 81 ~~~~i~~~---~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1rkq_A 81 DGSTVAQT---ALSYDD---YRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFL 154 (282)
T ss_dssp TCCEEEEC---CBCHHH---HHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBC
T ss_pred CCeEEEEe---cCCHHH---HHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCce
Confidence 22 2332 344433 44444433321 11223321100 000000 000 00000
Q ss_pred ------c-ccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 721 ------S-CQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 721 ------~-~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. ....++.+.+.+.+.. .+.+ .++..++||.|+|++||.+++++++.+++++.+|.
T Consensus 155 ki~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~ 218 (282)
T 1rkq_A 155 KVMMIDEPAILDQAIARIPQEVKE-KYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIM 218 (282)
T ss_dssp EEEEECCHHHHHHHHHHSCHHHHH-HEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred EEEEECCHHHHHHHHHHHHHHhcC-CEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEE
Confidence 0 0112222222211211 2554 47888999999999999999999999999986654
No 36
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.62 E-value=1.2e-14 Score=154.04 Aligned_cols=177 Identities=6% Similarity=0.031 Sum_probs=117.8
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
+.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+..++..++ ..++|++||+.++...+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 368999999999999 6778999999999999985 99999999999999988887664 237999999999864333
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeecc---------C------------CCCc--------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQD---------A------------DPDF-------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~---------a------------d~d~-------- 719 (780)
.... ...+ ++.+.++++.+.+......+............. . -+++
T Consensus 81 ~~~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (290)
T 3dnp_A 81 PFFE--KRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEP 155 (290)
T ss_dssp CSEE--CCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSC
T ss_pred EEEe--cCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCC
Confidence 2221 1233 455777777766542222222211111100000 0 0000
Q ss_pred ----------ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ----------GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ----------~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
......++.+.+.... ..+. +.++..++||.|+++|||.|++++++++|+++++|.
T Consensus 156 ~~~~ki~~~~~~~~~~~~~~~l~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 222 (290)
T 3dnp_A 156 VSAPVIEVYTEHDIQHDITETITKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVV 222 (290)
T ss_dssp CCCSEEEEECCGGGHHHHHHHHHHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred CCceEEEEeCCHHHHHHHHHHHHhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEE
Confidence 0112233444442221 2355 456899999999999999999999999999998764
No 37
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=99.62 E-value=2.7e-15 Score=160.94 Aligned_cols=177 Identities=11% Similarity=0.054 Sum_probs=114.6
Q ss_pred cCceEEeCCCCCCCCCCCC-CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh--ccCC--C---ceEEecCccE
Q 003999 590 ERRAIFLDYDGTVVPETSI-IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL--APCE--M---LGIAAEHGYF 661 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f--~~l~--~---lgliaenG~~ 661 (780)
..|+|++|+||||++ . ++.++++++++|++|++. |+.|+|+|||++..+..++ ..++ . .++|++||+.
T Consensus 26 ~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~ 101 (301)
T 2b30_A 26 DIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI 101 (301)
T ss_dssp CCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTE
T ss_pred cccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeE
Confidence 368999999999999 5 678999999999999985 9999999999999999888 6543 2 4699999999
Q ss_pred EeeCCCC-ceEecCCCcChhHHHHHHHHHHHHHhcC----------CCceeeccc-ce--------EEEeeccCC----C
Q 003999 662 IRWNKTS-EWETNHLGADLEWKKIVEPVMRSYTEAT----------DGSNIEIKE-SA--------LVWHHQDAD----P 717 (780)
Q Consensus 662 ir~~~~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~t----------~gs~iE~k~-~~--------l~~hyr~ad----~ 717 (780)
+...++. .+.. ..+. +.+.++++.+.+.. .+.+++... .. ..++++..+ .
T Consensus 102 i~~~~~~~i~~~---~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (301)
T 2b30_A 102 VYDQIGYTLLDE---TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLK 175 (301)
T ss_dssp EECTTCCEEEEC---CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTT
T ss_pred EEeCCCCEEEEc---cCCH---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhc
Confidence 9874222 2222 2342 33445554443311 112221110 00 000111100 0
Q ss_pred --Cc-------ccccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 718 --DF-------GSCQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 718 --d~-------~~~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.. ......++.+.|.+.+. ..+.+. ++..++||.|+|++||.|+++|++.+|+++++|.
T Consensus 176 ~~~i~ki~~~~~~~~~~~~~~~l~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~ 244 (301)
T 2b30_A 176 YRTMNKLMIVLDPSESKTVIGNLKQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVL 244 (301)
T ss_dssp CCCCSEEEECCCTTTHHHHHHHHHHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEE
Confidence 00 00123444455544332 246654 5788999999999999999999999999987654
No 38
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.60 E-value=7.8e-15 Score=170.17 Aligned_cols=199 Identities=12% Similarity=0.027 Sum_probs=147.5
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEE
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (780)
++.++|+++++....+.... ...|+++ ++.+++++++|+.+ ||+..+++|+.++++++|+++ |+++
T Consensus 345 ~i~~ipn~~~~~~~~~~~~~-------~~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~ 412 (568)
T 2vsy_A 345 HVLRLQGAFQPSDTSRVVAE-------PPSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLL 412 (568)
T ss_dssp EEEECSSCSCCCCTTCCCCC-------CCCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEE
T ss_pred eeEcCCCcCCCCCCCCCCCC-------CCCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEe
Confidence 57788886554322111000 0123444 34567789999999 999999999999999999876 8777
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 376 ~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
|. +++.. +++++++.+.+.. ...|+| .|.++.+++.++|+.|||||+||.+ |||++.+|||+||
T Consensus 413 G~----~g~~~----~~l~~~~~~~~l~-----~~~v~~-~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G- 476 (568)
T 2vsy_A 413 SG----PGEAD----ARLRAFAHAQGVD-----AQRLVF-MPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG- 476 (568)
T ss_dssp CC----STTHH----HHHHHHHHHTTCC-----GGGEEE-ECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT-
T ss_pred cC----CHHHH----HHHHHHHHHcCCC-----hhHEEe-eCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC-
Confidence 62 34443 3444555443211 013664 5689999999999999999999999 9999999999997
Q ss_pred CCCccccccccCCCCCCCceEEE-------cCCC-------CccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003999 456 GTPIMDEALGRERDSPHTSMLVV-------SEFI-------GCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRH 521 (780)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~-------Se~~-------G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 521 (780)
.|+|+ |..+ |+.+.+.+ |+++++++|.++++.++ .+....
T Consensus 477 ------------------~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~~-~~~~~~ 530 (568)
T 2vsy_A 477 ------------------CPVLTTPGETFAARVAGSLNHHLGLDEMNVA-------DDAAFVAKAVALASDPA-ALTALH 530 (568)
T ss_dssp ------------------CCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHCHH-HHHHHH
T ss_pred ------------------CCEEeccCCCchHHHHHHHHHHCCChhhhcC-------CHHHHHHHHHHHhcCHH-HHHHHH
Confidence 48899 9888 88776543 89999999999999654 455555
Q ss_pred HHHhhHh---hhCCHHHHHHHHHHHHHHHHHh
Q 003999 522 EKHYRYV---STHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 522 ~~~~~~V---~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
++.++.+ ..+++...++.+.+-+++..+.
T Consensus 531 ~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 531 ARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6677777 6699999999999888877664
No 39
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.60 E-value=7.2e-15 Score=153.90 Aligned_cols=176 Identities=14% Similarity=0.237 Sum_probs=114.7
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCce
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w 670 (780)
.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+.+++..++..++|++||+.+...+...+
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 80 (274)
T 3fzq_A 5 YKLLILDIDGTLRD---EVYGIPESAKHAIRLCQKN-HCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLY 80 (274)
T ss_dssp CCEEEECSBTTTBB---TTTBCCHHHHHHHHHHHHT-TCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEE
T ss_pred ceEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEE
Confidence 58999999999999 6678999999999999984 9999999999999999988877545689999999986543233
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEE----------------------Eee--cc---C-------C
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV----------------------WHH--QD---A-------D 716 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~----------------------~hy--r~---a-------d 716 (780)
.. ..+ .+.+.++++.+.+..-...+........ |.. .. . .
T Consensus 81 ~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 3fzq_A 81 NQ---SFN---QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKS 154 (274)
T ss_dssp EC---CCC---HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSS
T ss_pred Ec---CCC---HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcc
Confidence 32 233 2445556655544321112221111110 000 00 0 0
Q ss_pred CCc---ccccHHHHHHHHHHHhcCCCeE-EEEcC--eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 717 PDF---GSCQAKELLDHLESVLANEPAV-VKRGQ--HIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 717 ~d~---~~~qa~el~~~L~~~l~~~~v~-v~~g~--~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
... ......+..+.+.+.+... +. +.++. .++||.|++++||.+++++++++|+++++|.
T Consensus 155 ~~~~ki~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 220 (274)
T 3fzq_A 155 QDIHKICLWSNEKVFDEVKDILQDK-MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETI 220 (274)
T ss_dssp CCCCEEEEECCHHHHHHHHHHHGGG-EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEE
T ss_pred cCeEEEEEEcCHHHHHHHHHHhhcc-eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEE
Confidence 000 0001122333444434332 34 34555 9999999999999999999999999997764
No 40
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=99.60 E-value=1.8e-14 Score=151.48 Aligned_cols=175 Identities=14% Similarity=0.056 Sum_probs=112.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-Cc-eEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-ML-GIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~l-gliaenG~~ir~~~~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++ .+ .|+.|+|+|||+...+.+++..++ .. ++|++||+.+...++
T Consensus 2 ikli~~DlDGTLl~---~~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~- 75 (268)
T 1nf2_A 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE- 75 (268)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT-
T ss_pred ccEEEEeCCCcCCC---CCCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCC-
Confidence 47999999999999 667899999999999 76 599999999999999999887653 22 699999999987422
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhc--------CCCceeeccc---------ceEEEe-eccCCCCc-----------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKE---------SALVWH-HQDADPDF----------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~---------~~l~~h-yr~ad~d~----------- 719 (780)
.... ....+. +.+.++++.+.+. ..+.+.+.+. ..+... +... .++
T Consensus 76 ~~i~-~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ki~~ 150 (268)
T 1nf2_A 76 GVIL-NEKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNL-SELVSKMGTTKLLL 150 (268)
T ss_dssp EEEE-ECCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTH-HHHHHHHCBSEEEE
T ss_pred CEEE-ecCCCH---HHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCH-HHhcccCCceEEEE
Confidence 2221 122443 3345555554432 1222222110 000000 0000 000
Q ss_pred -c-cccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -G-SCQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -~-~~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. .....++.+.+.+.+.. .+.+ .++..++||.|++++||.+++++++.+++++.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 210 (268)
T 1nf2_A 151 IDTPERLDELKEILSERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV 210 (268)
T ss_dssp ECCHHHHHHHHHHHHHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEE
T ss_pred ECCHHHHHHHHHHHHHHhcC-CEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeE
Confidence 0 00122333344333322 3554 46788999999999999999999999999997764
No 41
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.59 E-value=1.1e-14 Score=153.31 Aligned_cols=178 Identities=11% Similarity=0.057 Sum_probs=103.2
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWN 665 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~ 665 (780)
+.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||++..+.+++..+. ..++|++||+.+...
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~ 79 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAAKAQ-GIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTI 79 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEET
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECC
Confidence 368999999999999 6678999999999999995 99999999999999999887653 236999999944344
Q ss_pred CCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEe-------------------eccC-----CCCc--
Q 003999 666 KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH-------------------HQDA-----DPDF-- 719 (780)
Q Consensus 666 ~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~h-------------------yr~a-----d~d~-- 719 (780)
.+..... ...+ .+.+.++++.+.+..-...+.......... +... +...
T Consensus 80 ~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 154 (279)
T 3mpo_A 80 SGKVLTN--HSLT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISK 154 (279)
T ss_dssp TSCEEEE--CCCC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCE
T ss_pred CCCEEEe--cCCC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEE
Confidence 3332221 1233 344556666555432222222111111000 0000 0000
Q ss_pred ----c-cccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ----G-SCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ----~-~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. .....++.+.+.+.+.+ .+. +.++..++||.|+++|||.|++++++++|+++++|.
T Consensus 155 i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 217 (279)
T 3mpo_A 155 AMFVDYPQVIEQVKANMPQDFKD-RFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVM 217 (279)
T ss_dssp EEEECCHHHHHHHHHHCCHHHHH-HEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEcCCHHHHHHHHHHHHHHhCC-CEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 0 00112223333222222 244 446889999999999999999999999999997764
No 42
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.57 E-value=2.9e-14 Score=148.52 Aligned_cols=175 Identities=13% Similarity=0.086 Sum_probs=112.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCce
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w 670 (780)
.|+|++|+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+..++..++..++|+.||+++...++..+
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~ 78 (258)
T 2pq0_A 3 RKIVFFDIDGTLLD---EQKQLPLSTIEAVRRLKQS-GVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLY 78 (258)
T ss_dssp CCEEEECTBTTTBC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEE
T ss_pred ceEEEEeCCCCCcC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEE
Confidence 58999999999999 5677999999999999985 9999999999999988888765323478999999987543222
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEE----------------eeccCCCCccc---------ccHH
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW----------------HHQDADPDFGS---------CQAK 725 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~----------------hyr~ad~d~~~---------~qa~ 725 (780)
.. ..+ .+.+.++++.+.+..-...+......... .+...++++.. ...+
T Consensus 79 ~~---~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 152 (258)
T 2pq0_A 79 KQ---PLR---REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRA 152 (258)
T ss_dssp EC---CCC---HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH
T ss_pred Ee---cCC---HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCH
Confidence 22 223 35566666665543111111111110000 00001111100 0001
Q ss_pred HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 726 ELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+....+.+.+. .+.+ .++..++||.|+|+|||.|++++++++|+++++|.
T Consensus 153 ~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 203 (258)
T 2pq0_A 153 EEEEPYVRNYP--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVY 203 (258)
T ss_dssp HHHHHHHHHCT--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHhCC--CeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEE
Confidence 11222332222 3543 46788999999999999999999999999997764
No 43
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.55 E-value=3.8e-14 Score=148.28 Aligned_cols=175 Identities=15% Similarity=0.104 Sum_probs=110.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEE-eeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI-RWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~i-r~~~~~ 668 (780)
..|+|+||+||||++. ..+.++++++++|++|++. |+.|+++|||+...+ +.+..++..++|++||+.+ ...++.
T Consensus 11 miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~~ 86 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKVHDS-GIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGSV 86 (268)
T ss_dssp CCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSCE
T ss_pred ceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCeE
Confidence 3689999999999982 2457899999999999995 999999999999888 4566665567899999999 766432
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEe--------ecc---CCC---Ccc-c-----------c
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH--------HQD---ADP---DFG-S-----------C 722 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~h--------yr~---ad~---d~~-~-----------~ 722 (780)
.+.. ..+ .+.+.++++.+.+..-...+.......... ++. ..+ ++. . .
T Consensus 87 ~~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3r4c_A 87 IRKV---AIP---AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFY 160 (268)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEE
T ss_pred EEEe---cCC---HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEe
Confidence 2322 233 344555665554422122222211111000 000 000 000 0 0
Q ss_pred cHHHHHHHHHHHhcC-CCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 723 QAKELLDHLESVLAN-EPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 723 qa~el~~~L~~~l~~-~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..++.... +... ..+. +.++..++||.|+++|||.|++++++++|+++++|.
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 214 (268)
T 3r4c_A 161 FDEEAEQK---VMPLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIM 214 (268)
T ss_dssp CCHHHHHH---HGGGCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred cChHHHHH---HHHhCCCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEE
Confidence 00111111 1221 2344 456889999999999999999999999999997764
No 44
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=99.55 E-value=1.3e-13 Score=146.50 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=114.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ ..+.++++++++|++|++. |+.|+++|||++..+..++..++ ...+|++||+.++...+..
T Consensus 4 ikli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 79 (288)
T 1nrw_A 4 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 79 (288)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred eEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcE
Confidence 58999999999999 5678999999999999984 99999999999999999988763 2359999999998742222
Q ss_pred -eEecCCCcChhHHHHHHHHHHHHHhcC--------CCceeeccc------c--e-----------------------EE
Q 003999 670 -WETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKE------S--A-----------------------LV 709 (780)
Q Consensus 670 -w~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~------~--~-----------------------l~ 709 (780)
+.. ..+ .+.+.++++...+.. .+.+.+... . . ..
T Consensus 80 ~~~~---~~~---~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (288)
T 1nrw_A 80 YHHE---TID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 153 (288)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred EEEe---eCC---HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCC
Confidence 222 223 355666666554321 122221100 0 0 00
Q ss_pred EeeccCCCCc-------c--c----ccHHHHHHHHHHHhcC-CCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCC
Q 003999 710 WHHQDADPDF-------G--S----CQAKELLDHLESVLAN-EPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRAR 774 (780)
Q Consensus 710 ~hyr~ad~d~-------~--~----~qa~el~~~L~~~l~~-~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~ 774 (780)
+.+...-.++ . . ...++..+.+.+.+.. ..+.+. ++..++||.|+|++||.+++++++.+|+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~~~~~~ 233 (288)
T 1nrw_A 154 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLE 233 (288)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGG
T ss_pred ceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHhCCCHH
Confidence 1111000000 0 0 0011223334443332 236654 5788999999999999999999999999987
Q ss_pred ccc
Q 003999 775 ACK 777 (780)
Q Consensus 775 ~~~ 777 (780)
+|.
T Consensus 234 ~~~ 236 (288)
T 1nrw_A 234 ETA 236 (288)
T ss_dssp GEE
T ss_pred HEE
Confidence 764
No 45
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=99.55 E-value=9.1e-15 Score=151.83 Aligned_cols=166 Identities=16% Similarity=0.161 Sum_probs=105.3
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--C-CceEEecCccEEeeCC--
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--E-MLGIAAEHGYFIRWNK-- 666 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~-~lgliaenG~~ir~~~-- 666 (780)
++|++|+||||++. +..+ ++++++|+++.+ |+.|+|+|||++..+.+++..+ + ..++|++||+.++...
T Consensus 4 ~li~~DlDGTLl~~---~~~~-~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~ 77 (244)
T 1s2o_A 4 LLLISDLDNTWVGD---QQAL-EHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL 77 (244)
T ss_dssp EEEEECTBTTTBSC---HHHH-HHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred eEEEEeCCCCCcCC---HHHH-HHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence 49999999999983 3333 678889988653 7999999999999999988763 2 2479999999998642
Q ss_pred CCceEecCCCcChhH-HHHHHHHHHHHHhcCCCcee----ecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC--CC
Q 003999 667 TSEWETNHLGADLEW-KKIVEPVMRSYTEATDGSNI----EIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN--EP 739 (780)
Q Consensus 667 ~~~w~~~~~~~d~~w-k~~v~~i~~~~~e~t~gs~i----E~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~--~~ 739 (780)
+..|... .+..| .+.+..++. ..++... +.+...+.+++.. +.. .+..+.+.+.+.. ..
T Consensus 78 ~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ki~~~~~~---~~~----~~~~~~l~~~~~~~~~~ 143 (244)
T 1s2o_A 78 DQHWADY---LSEHWQRDILQAIAD----GFEALKPQSPLEQNPWKISYHLDP---QAC----PTVIDQLTEMLKETGIP 143 (244)
T ss_dssp CHHHHHH---HHTTCCHHHHHHHHH----TCTTEEECCGGGCBTTBEEEEECT---TSC----THHHHHHHHHHHTSSCC
T ss_pred ChHHHHH---HhccccHHHHHHHHH----hccCccccCcccCCCeEEEEEeCh---hhH----HHHHHHHHHHHHhcCCC
Confidence 1112110 01112 122222222 2222211 2233445555432 111 1223334433332 24
Q ss_pred eEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 740 AVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 740 v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+.+ .++..++||.|+|++||.+++++++.+++++++|.
T Consensus 144 ~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~ 182 (244)
T 1s2o_A 144 VQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTL 182 (244)
T ss_dssp EEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred eEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHHEE
Confidence 665 46789999999999999999999999999987754
No 46
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.54 E-value=5.4e-14 Score=154.17 Aligned_cols=244 Identities=15% Similarity=0.122 Sum_probs=153.3
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~~ 267 (780)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.++ .+|.+...+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34556677 899999876555554443444578875 4555443222221 22333444332 37888888776665
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecC-CCchhhhhhcCCchhHHHHHHHHHHcC-CCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQFD-GKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~G-Id~~~~~~~~~~~~~~~~~~~lr~~~~-~~~vil~Vdrld~ 345 (780)
.|.+ .|+. ..++.++|++ +|...+... ..+++++++ ++.+++.++|+..
T Consensus 160 ~l~~-----~g~~---------------~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKR---------------EEGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCC---------------GGGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCC---------------cceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5542 1321 1135566664 443322110 011233343 3456778999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++++.+++|+++ |+.++. .++ +++++++++++ . ...|+++ +.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~---~------~~~v~~~-g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLK---G------VRNFVLL-DPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHT---T------CTTEEEE-CCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhc---c------CCCEEEE-CCCCHHHHH
Confidence 9999999999999988899875 554432 222 23344444432 1 1247655 567888999
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC-CCCccccC--CCcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCSPSL--SGAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l--~~al~VnP~d~~~~ 502 (780)
.+|+.||++|.+| +|+ .+|||+||. |+|++. .+|+.+.+ ..|++|+ .|++++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~G~-------------------PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~l 324 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAALGV-------------------PVVVLRNVTERPEGLKAGILKLAG-TDPEGV 324 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHTTC-------------------CEEECSSSCSCHHHHHHTSEEECC-SCHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHcCC-------------------CEEeccCCCcchhhhcCCceEECC-CCHHHH
Confidence 9999999999999 554 789999974 777764 45555544 2478885 499999
Q ss_pred HHHHHHHHcCC
Q 003999 503 ADAMTLAINMR 513 (780)
Q Consensus 503 A~ai~~aL~m~ 513 (780)
|++|.++|+++
T Consensus 325 a~~i~~ll~d~ 335 (376)
T 1v4v_A 325 YRVVKGLLENP 335 (376)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHHhCh
Confidence 99999999865
No 47
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.53 E-value=3.3e-14 Score=146.11 Aligned_cols=165 Identities=10% Similarity=-0.019 Sum_probs=109.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++. |+.|+|+|||++..+.+++..++ ..++|++||+.++..++ .
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~-~ 79 (227)
T 1l6r_A 5 IRLAAIDVDGNLTD---RDRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDG-S 79 (227)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTS-C
T ss_pred eEEEEEECCCCCcC---CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCC-C
Confidence 48999999999999 5678999999999999984 99999999999999999887653 22599999999986432 2
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcc---cccHHHHHHHHHHHhcCCCeEEEEcC
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG---SCQAKELLDHLESVLANEPAVVKRGQ 746 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~---~~qa~el~~~L~~~l~~~~v~v~~g~ 746 (780)
+....... +.+.++ +...+ .+ +.+.. ...+++ . .++. .....+..+.+.+.+ .+.+.++.
T Consensus 80 ~i~~~~~l-----~~~~~i-~~~~~----~~-~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 142 (227)
T 1l6r_A 80 IKKFFSNE-----GTNKFL-EEMSK----RT-SMRSI-LTNRWR-E-ASTGFDIDPEDVDYVRKEAESR---GFVIFYSG 142 (227)
T ss_dssp EEESSCSH-----HHHHHH-HHHTT----TS-SCBCC-GGGGGC-S-SSEEEBCCGGGHHHHHHHHHTT---TEEEEEET
T ss_pred EEEEeccH-----HHHHHH-HHHHH----Hh-cCCcc-ccccce-e-cccceEEecCCHHHHHHHHHhc---CEEEEecC
Confidence 22011112 344445 43332 11 11110 000000 0 0000 000112223333323 56666899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 747 HIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.++||.|+|++||.+++++++.+++++.+|.
T Consensus 143 ~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~ 173 (227)
T 1l6r_A 143 YSWHLMNRGEDKAFAVNKLKEMYSLEYDEIL 173 (227)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred cEEEEecCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 9999999999999999999999999986653
No 48
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.52 E-value=4.3e-14 Score=153.95 Aligned_cols=257 Identities=12% Similarity=0.017 Sum_probs=162.2
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl 270 (780)
+++..+| |+|++|.....+ +..+..+..++|++++.|..+|.. .+..+. -.+|.+...+..
T Consensus 91 ~l~~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~~~~~--~~~d~v~~~~~~------ 151 (364)
T 1f0k_A 91 IMKAYKP--DVVLGMGGYVSG-PGGLAAWSLGIPVVLHEQNGIAGL--------TNKWLA--KIATKVMQAFPG------ 151 (364)
T ss_dssp HHHHHCC--SEEEECSSTTHH-HHHHHHHHTTCCEEEEECSSSCCH--------HHHHHT--TTCSEEEESSTT------
T ss_pred HHHhcCC--CEEEEeCCcCch-HHHHHHHHcCCCEEEEecCCCCcH--------HHHHHH--HhCCEEEecChh------
Confidence 3445566 899999754332 333333345788888888766531 011111 124544332210
Q ss_pred HHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCe-EEEEeccccccCC
Q 003999 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKK-LILGIDDMDIFKG 348 (780)
Q Consensus 271 ~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~-vil~Vdrld~~KG 348 (780)
. +. ++.++|+|+|.+.+... .. ..++ .. ++++ +++.+||+.+.||
T Consensus 152 ----------------~----~~----~~~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 152 ----------------A----FP----NAEVVGNPVRTDVLALP----LP---QQRL--AGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ----------------S----SS----SCEECCCCCCHHHHTSC----CH---HHHH--TTCCSSEEEEEECTTTCCHHH
T ss_pred ----------------h----cC----CceEeCCccchhhcccc----hh---hhhc--ccCCCCcEEEEEcCchHhHHH
Confidence 0 11 35688999998776431 11 1111 12 3455 5556779999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|++++.+ ++.++.+++ .++ .+ ++.+++++. |. ..|.+. +.+ +++..+|
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~----~l~~~~~~~----~~---~~v~~~-g~~--~~~~~~~ 252 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQ----SVEQAYAEA----GQ---PQHKVT-EFI--DDMAAAY 252 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC----TTC-HH----HHHHHHHHT----TC---TTSEEE-SCC--SCHHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC----Cch-HH----HHHHHHhhc----CC---CceEEe-cch--hhHHHHH
Confidence 9999999998743 244433332 222 22 334444433 21 136655 455 7899999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc-------cC--C-CcEEECCCC
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP-------SL--S-GAIRVNPWD 498 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l--~-~al~VnP~d 498 (780)
+.||++|+|| | +++++|||+|| .|+|+|...|... .+ . .|++++|.|
T Consensus 253 ~~ad~~v~~s---g-~~~~~EAma~G-------------------~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d 309 (364)
T 1f0k_A 253 AWADVVVCRS---G-ALTVSEIAAAG-------------------LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ 309 (364)
T ss_dssp HHCSEEEECC---C-HHHHHHHHHHT-------------------CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGG
T ss_pred HhCCEEEECC---c-hHHHHHHHHhC-------------------CCEEEeeCCCCchhHHHHHHHHHhCCcEEEecccc
Confidence 9999999999 4 89999999997 4899999887632 34 2 489999988
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHhh
Q 003999 499 --IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 499 --~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
++++|++|.++ .++.++...+..++++..+++..-++.+++-+++..+.|
T Consensus 310 ~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 310 LSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp CCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred CCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999988 344566666667888888888887887776666554443
No 49
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.52 E-value=7.6e-14 Score=143.41 Aligned_cols=166 Identities=14% Similarity=0.069 Sum_probs=112.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|+||+||||++ ..+.++++++++|++|++. |+.|+++|||+...+.+++..++ ...+|++||+.+...++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 3 IKAISIDIDGTITY---PNRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 78 (231)
T ss_dssp CCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred eeEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEE
Confidence 47999999999999 5678999999999999984 99999999999999988876543 2358999999987633212
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccc----eEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEc
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKES----ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRG 745 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~----~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g 745 (780)
|.. .. +.+.++++.+.+..||..++..+. .+.+. . +.. . .+....+.+.+. ..+.++++
T Consensus 79 ~~~---~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~---~-~~~~~~~~~~~~-~~~~~~~~ 141 (231)
T 1wr8_A 79 FLA---SM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM-R---ETI---N-VETVREIINELN-LNLVAVDS 141 (231)
T ss_dssp ESC---CC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC-T---TTS---C-HHHHHHHHHHTT-CSCEEEEC
T ss_pred Eec---cH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE-C---CCC---C-HHHHHHHHHhcC-CcEEEEec
Confidence 221 12 334556655553445544321100 11111 0 110 1 122222222233 23665588
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 746 QHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 746 ~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..++|+.|++.+|+.+++++++++|+++.+|.
T Consensus 142 ~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 173 (231)
T 1wr8_A 142 GFAIHVKKPWINKGSGIEKASEFLGIKPKEVA 173 (231)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHTSCGGGEE
T ss_pred CcEEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 89999999999999999999999999987764
No 50
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.50 E-value=3.3e-13 Score=149.03 Aligned_cols=249 Identities=10% Similarity=-0.007 Sum_probs=156.4
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARH 268 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~ 268 (780)
++++..+| |+|+++.++++ |.++.... . |+.+..+...+.+ +.+. +-.+|.|.+++...++.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~--~~~~~~~~-~-p~~~~~~~~~~~~-----------~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFW--PSLIIFTK-V-PKILVNAYAKGSL-----------IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCC--HHHHHHCC-S-CEEEEEECCCCCH-----------HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCc--HHHHHHHh-C-CEEEEEeecCchH-----------HHHHHHHhCCEEEECCHHHHHH
Confidence 34566677 89998877765 34443322 2 5544433211111 2233 33589999999988776
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
|.+ +|. . +|.++|+|. |..... + ++.+. +++++++++. .||
T Consensus 168 l~~-----~g~----------------~-ki~vi~n~~----f~~~~~-~---------~~~l~-~~vi~~~~~~--~k~ 208 (374)
T 2xci_A 168 FKT-----FGA----------------K-RVFSCGNLK----FICQKG-K---------GIKLK-GEFIVAGSIH--TGE 208 (374)
T ss_dssp HHT-----TTC----------------C-SEEECCCGG----GCCCCC-S---------CCCCS-SCEEEEEEEC--GGG
T ss_pred HHH-----cCC----------------C-eEEEcCCCc----cCCCcC-h---------hhhhc-CCEEEEEeCC--Cch
Confidence 642 122 1 456677652 221110 0 01111 2677777764 589
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC--CCCcccEEEecCCCCHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG--SPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g--~~~~~pV~~~~~~v~~~el~a 426 (780)
+..+++|+.++.+++|+++ |+++| ++++.. +++++++++.+-.+. ..+...|. +.+. .+|+..
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~ 273 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDVI-LVDR--FGILKE 273 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcEE-EECC--HHHHHH
Confidence 9999999999998999887 87776 244321 234444444432210 00001344 4443 478999
Q ss_pred HHHhcceeeecc-CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC----CCcEEECCCCHH
Q 003999 427 YYAVAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL----SGAIRVNPWDID 500 (780)
Q Consensus 427 ly~~ADv~vvtS-~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~al~VnP~d~~ 500 (780)
+|+.||++++|| ..|++|++++|||||| .|+|.+ ...|+.+.+ .+|.++.|.|++
T Consensus 274 ~y~~aDv~vl~ss~~e~gg~~~lEAmA~G-------------------~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~ 334 (374)
T 2xci_A 274 LYPVGKIAIVGGTFVNIGGHNLLEPTCWG-------------------IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNET 334 (374)
T ss_dssp HGGGEEEEEECSSSSSSCCCCCHHHHTTT-------------------CCEEECSCCTTSHHHHHHHHHTTCEEECCSHH
T ss_pred HHHhCCEEEECCcccCCCCcCHHHHHHhC-------------------CCEEECCCccChHHHHHHHHHCCCEEEeCCHH
Confidence 999999988876 5577899999999997 477765 566676644 257888899999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
++|++|.++|++ +.++.+.++.++++.+
T Consensus 335 ~La~ai~~ll~d--~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSV--KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHS--CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHHHHHh
Confidence 999999999985 3455555667777654
No 51
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.50 E-value=5.9e-14 Score=146.70 Aligned_cols=173 Identities=12% Similarity=0.119 Sum_probs=108.2
Q ss_pred ceEEeCCCCCCCCCCCCCCC-CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeCC
Q 003999 592 RAIFLDYDGTVVPETSIIKS-PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWNK 666 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~-ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~~ 666 (780)
|+|++|+||||++ .++. ++++++++|++|++. |+.|+++|||+ ..+.+++..++ ..++|++||+.+...+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAAHAK-GLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHHHHT-TCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 7999999999999 5566 999999999999985 99999999999 88776665443 2368999999998743
Q ss_pred CCceEecCCCcChhHHHHHHHHHHHHHhcC--------CCceeecccceEE-EeeccCC----CC-----------ccc-
Q 003999 667 TSEWETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESALV-WHHQDAD----PD-----------FGS- 721 (780)
Q Consensus 667 ~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~~~l~-~hyr~ad----~d-----------~~~- 721 (780)
+..+.. ..+. +.+.++++...+.. .+.+++.....+. .+++... +. +..
T Consensus 78 ~~i~~~---~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKS---AIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEEC---CCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEec---CCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 222332 2342 34555555444321 1222221100000 1111100 00 000
Q ss_pred -ccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 722 -CQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 722 -~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....+....+...+. .+.+. ++..++||.|.+++||.+++++++++|+++++|.
T Consensus 152 ~~~~~~~~~~~~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 207 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETM 207 (261)
T ss_dssp ECCCHHHHHHHGGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred EEeCHHHHHHHHHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEE
Confidence 000111122332222 35654 5778999999999999999999999999987764
No 52
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=99.47 E-value=2.8e-13 Score=140.92 Aligned_cols=170 Identities=14% Similarity=0.050 Sum_probs=101.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCC--
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT-- 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~-- 667 (780)
.|+|++|+||||+ . +..++ +++++|++|++. |+.|+|+|||++..+..++..++ ..++|++||++++..++
T Consensus 2 ikli~~DlDGTLl-~---~~~~~-~~~~~l~~l~~~-g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 75 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPD-PAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSG-GGHHHHHHHHHT-TEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCC
T ss_pred ccEEEEeCCCCcc-C---CCCcH-HHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcc
Confidence 3799999999999 3 23444 499999999984 99999999999999999887653 34799999999987632
Q ss_pred ----------CceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecc--------cceEEEee------ccCCCCccccc
Q 003999 668 ----------SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIK--------ESALVWHH------QDADPDFGSCQ 723 (780)
Q Consensus 668 ----------~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k--------~~~l~~hy------r~ad~d~~~~q 723 (780)
..+... ...+ .+.+.++++.+.+.. +...... ...+.+.. +.....+....
T Consensus 76 ~~~~~~~~~~~~~i~~-~~l~---~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (249)
T 2zos_A 76 PFDVKGKEVGNYIVIE-LGIR---VEKIREELKKLENIY-GLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWS 150 (249)
T ss_dssp C------CCCCCCEEE-CSCC---HHHHHHHHHHHHHHH-TCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECS
T ss_pred cccccccccCceEEEe-cCCC---HHHHHHHHHHHHhhc-CEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecC
Confidence 122211 1233 233444444433210 0000000 00000000 00000000000
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCC-CCCcc
Q 003999 724 AKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCV-RARAC 776 (780)
Q Consensus 724 a~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i-~~~~~ 776 (780)
.++..+.+.. .++.+.++..++||.| |+|||.|+++|++.+++ ++++|
T Consensus 151 ~~~~~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~~~~~~~v 199 (249)
T 2zos_A 151 RDGWEEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYKRLGQIES 199 (249)
T ss_dssp SSCHHHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHHTTSCEEE
T ss_pred CHHHHHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhccCCCceE
Confidence 0011223332 2467667678999999 99999999999999998 77554
No 53
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.41 E-value=1e-11 Score=138.13 Aligned_cols=253 Identities=17% Similarity=0.151 Sum_probs=159.2
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYA 266 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~ 266 (780)
.++.+..+| |+|++|+.-...+|..+..+..++|++. +|.+..+...+ -|+.+++.+-+. .+|++-..+....
T Consensus 104 ~~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~--~~~~~~~~r~~~~~~a~~~~~~se~~~ 178 (396)
T 3dzc_A 104 QQVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIY--SPWPEEGNRKLTAALTQYHFAPTDTSR 178 (396)
T ss_dssp HHHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTT--SSTTHHHHHHHHHHTCSEEEESSHHHH
T ss_pred HHHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHH
Confidence 344556688 8999998766666655555566888764 33333332222 245567777653 4799988998888
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeec-CCCchhhhhhcCCchhHHHHHHHHHHcC----CCeE-EEEe
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPV-GVHMGRLESVLNLPATATKIKEIEKQFD----GKKL-ILGI 340 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~-GId~~~~~~~~~~~~~~~~~~~lr~~~~----~~~v-il~V 340 (780)
++|.+ .|+.. .+|.++++ ++|.-.+..... ........++++++. ++++ ++..
T Consensus 179 ~~l~~-----~G~~~---------------~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~ 237 (396)
T 3dzc_A 179 ANLLQ-----ENYNA---------------ENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTG 237 (396)
T ss_dssp HHHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEEC
T ss_pred HHHHH-----cCCCc---------------CcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEE
Confidence 77764 34421 12444443 455433221000 000011256777763 3554 4556
Q ss_pred ccccc-cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 341 DDMDI-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 341 drld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
+|... -||+..+++|++++.+++|+++ +|.++.+ ++. +++.++++. +. ...|+++ +++
T Consensus 238 hR~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~~---~~~~l~~~~-------~~--~~~v~~~-~~l 296 (396)
T 3dzc_A 238 HRRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NPN---VREPVNKLL-------KG--VSNIVLI-EPQ 296 (396)
T ss_dssp SCBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CHH---HHHHHHHHT-------TT--CTTEEEE-CCC
T ss_pred CCcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----ChH---HHHHHHHHH-------cC--CCCEEEe-CCC
Confidence 67553 4889999999999999999865 5544322 132 333344331 11 1246655 578
Q ss_pred CHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC-CC-cEEECC
Q 003999 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVNP 496 (780)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP 496 (780)
+..++..+|+.||++|.+| | |++ .||++||. |+|++ +.++..+.+ .| +++|.+
T Consensus 297 g~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~-------------------PvV~~~~~~~~~e~v~~G~~~lv~~ 352 (396)
T 3dzc_A 297 QYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK-------------------PVLVMRETTERPEAVAAGTVKLVGT 352 (396)
T ss_dssp CHHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC-------------------CEEECCSSCSCHHHHHHTSEEECTT
T ss_pred CHHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC-------------------CEEEccCCCcchHHHHcCceEEcCC
Confidence 8889999999999999998 6 655 99999974 77777 555555444 24 666665
Q ss_pred CCHHHHHHHHHHHHcCC
Q 003999 497 WDIDAVADAMTLAINMR 513 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~ 513 (780)
|.++++++|.++|+.+
T Consensus 353 -d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 353 -NQQQICDALSLLLTDP 368 (396)
T ss_dssp -CHHHHHHHHHHHHHCH
T ss_pred -CHHHHHHHHHHHHcCH
Confidence 8999999999999865
No 54
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=99.39 E-value=2.2e-13 Score=142.29 Aligned_cols=171 Identities=15% Similarity=0.075 Sum_probs=103.7
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCC----
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS---- 668 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~---- 668 (780)
+|+||+||||++ .. .++++++++|++|++ .|+.|+++|||+...+. .++ + ..++|++||+.+......
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 55 788899999999998 59999999999999998 443 2 356999999999887543
Q ss_pred ------ceEecCCCcChhHHHHHHHHHHHHHhc---CCCceeecc------cceEEEeec--cCCCCcc------cccHH
Q 003999 669 ------EWETNHLGADLEWKKIVEPVMRSYTEA---TDGSNIEIK------ESALVWHHQ--DADPDFG------SCQAK 725 (780)
Q Consensus 669 ------~w~~~~~~~d~~wk~~v~~i~~~~~e~---t~gs~iE~k------~~~l~~hyr--~ad~d~~------~~qa~ 725 (780)
.+.. ....+. +.+.++++.+.+. .-..+.... ...+..... ....++. .....
T Consensus 74 ~~~~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (259)
T 3zx4_A 74 GRPKGGYRVV-SLAWPY---RKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVE 149 (259)
T ss_dssp SEEETTEEEE-ECSCCH---HHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHH
T ss_pred cccCCceEEE-EcCCCH---HHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHH
Confidence 1211 112332 3334444433321 000000000 000000000 0000000 00123
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCC--Ccc-ccCC
Q 003999 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRA--RAC-KLDD 780 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~--~~~-~~~~ 780 (780)
++.+.+. ..++.++.+..++||.|+ ++||.+++++++++++++ .+| .+||
T Consensus 150 ~~~~~l~----~~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD 202 (259)
T 3zx4_A 150 AVLEALE----AVGLEWTHGGRFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGD 202 (259)
T ss_dssp HHHHHHH----HTTCEEEECSSSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEES
T ss_pred HHHHHHH----HCCcEEEecCceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeC
Confidence 3333333 335777777777899999 999999999999999986 544 4443
No 55
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.27 E-value=1.6e-10 Score=128.81 Aligned_cols=249 Identities=13% Similarity=0.148 Sum_probs=155.9
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhc--CCEEEeecHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLN--CDLIGFHTFDYA 266 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~--~Dligf~t~~y~ 266 (780)
.++.+..+| |+|++|+.-...++..+..+..++|++. .+.+.-+...+ -|+++++.+.++. +|++-..+..+.
T Consensus 107 ~~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~--~~~p~~~~r~~~~~~a~~~~~~se~~~ 181 (403)
T 3ot5_A 107 NEVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKY--SPFPEEMNRQLTGVMADIHFSPTKQAK 181 (403)
T ss_dssp HHHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTT--SSTTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHH
Confidence 344566688 8999999765556544444556788753 34333222222 1455666666543 799888899888
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeec-CCCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEecccc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPV-GVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMD 344 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~-GId~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld 344 (780)
++|.+ .|+.. .+|.++++ ++|...+..... .. .++++++++ +.+++.++|..
T Consensus 182 ~~l~~-----~Gi~~---------------~~i~vvGn~~~D~~~~~~~~~--~~----~~~~~~l~~~~~vlv~~~r~~ 235 (403)
T 3ot5_A 182 ENLLA-----EGKDP---------------ATIFVTGNTAIDALKTTVQKD--YH----HPILENLGDNRLILMTAHRRE 235 (403)
T ss_dssp HHHHH-----TTCCG---------------GGEEECCCHHHHHHHHHSCTT--CC----CHHHHSCTTCEEEEECCCCHH
T ss_pred HHHHH-----cCCCc---------------ccEEEeCCchHHHHHhhhhhh--cc----hHHHHhccCCCEEEEEeCccc
Confidence 88864 35421 12344443 566544322100 00 122333433 44566788875
Q ss_pred c-cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 345 I-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 345 ~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
. -||+...++|+.++.+++|+++ +|.++.|. + .+++.+++.. +. ...|.++ ++++..+
T Consensus 236 ~~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~~----~---~~~~~l~~~~-------~~--~~~v~l~-~~l~~~~ 294 (403)
T 3ot5_A 236 NLGEPMQGMFEAVREIVESREDTE----LVYPMHLN----P---AVREKAMAIL-------GG--HERIHLI-EPLDAID 294 (403)
T ss_dssp HHTTHHHHHHHHHHHHHHHCTTEE----EEEECCSC----H---HHHHHHHHHH-------TT--CTTEEEE-CCCCHHH
T ss_pred ccCcHHHHHHHHHHHHHHhCCCce----EEEecCCC----H---HHHHHHHHHh-------CC--CCCEEEe-CCCCHHH
Confidence 4 3789999999999999999865 55443321 2 2233333321 11 1246655 5788889
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC--CCcEEECCCCHH
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL--SGAIRVNPWDID 500 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~al~VnP~d~~ 500 (780)
+..+|+.||++|.+| | -+..||++|+. |+|++ ..++..+.+ +.+++|.+ |.+
T Consensus 295 ~~~l~~~ad~vv~~S---G--g~~~EA~a~g~-------------------PvV~~~~~~~~~e~v~~g~~~lv~~-d~~ 349 (403)
T 3ot5_A 295 FHNFLRKSYLVFTDS---G--GVQEEAPGMGV-------------------PVLVLRDTTERPEGIEAGTLKLIGT-NKE 349 (403)
T ss_dssp HHHHHHHEEEEEECC---H--HHHHHGGGTTC-------------------CEEECCSSCSCHHHHHHTSEEECCS-CHH
T ss_pred HHHHHHhcCEEEECC---c--cHHHHHHHhCC-------------------CEEEecCCCcchhheeCCcEEEcCC-CHH
Confidence 999999999998888 2 34499999974 77777 555554444 24677776 999
Q ss_pred HHHHHHHHHHcCCH
Q 003999 501 AVADAMTLAINMRD 514 (780)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (780)
+++++|.++|+.++
T Consensus 350 ~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 350 NLIKEALDLLDNKE 363 (403)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHcCHH
Confidence 99999999998653
No 56
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.17 E-value=2.1e-10 Score=121.31 Aligned_cols=177 Identities=15% Similarity=0.110 Sum_probs=112.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHH-------hccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKT-------LCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEH 658 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~-------L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaen 658 (780)
..++|+||+||||++ .. +++++..+|.+ +..++++.++++|||+...+..++..+. ...+++.+
T Consensus 21 ~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~ 95 (289)
T 3gyg_A 21 PQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDL 95 (289)
T ss_dssp CSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETT
T ss_pred CCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecC
Confidence 468999999999999 33 66666666662 4444699999999999999988876541 23478888
Q ss_pred ccEEeeCC---CC----ceEecCCCcChhHHHHHHHHHHHHHhcC-----CCceeecccceEEEeeccCCCCcccccHHH
Q 003999 659 GYFIRWNK---TS----EWETNHLGADLEWKKIVEPVMRSYTEAT-----DGSNIEIKESALVWHHQDADPDFGSCQAKE 726 (780)
Q Consensus 659 G~~ir~~~---~~----~w~~~~~~~d~~wk~~v~~i~~~~~e~t-----~gs~iE~k~~~l~~hyr~ad~d~~~~qa~e 726 (780)
|..+.... .. .|...... . -.++.+.++++.+.+.. ..+..+.+...+.++|+..++.. ..+
T Consensus 96 g~~i~~~~~ng~~~~~~~~~~~~~~-~-~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~----~~~ 169 (289)
T 3gyg_A 96 GTEITYFSEHNFGQQDNKWNSRINE-G-FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIN----DKK 169 (289)
T ss_dssp TTEEEECCSSSTTEECHHHHHHHHT-T-CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHH----HHH
T ss_pred CceEEEEcCCCcEeecCchhhhhcc-c-CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEecccccc----chH
Confidence 87776632 11 11110000 0 11345677777765541 22223444456778887764321 122
Q ss_pred HHHHHHHHhcCCCeE--EEE---------cCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 727 LLDHLESVLANEPAV--VKR---------GQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 727 l~~~L~~~l~~~~v~--v~~---------g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....+...+...++. +.. +..++|+.|.+.+|+.+++++++.+|+++.+|.
T Consensus 170 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 231 (289)
T 3gyg_A 170 NLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAI 231 (289)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEE
Confidence 233444444444443 333 237899999999999999999999999997764
No 57
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.70 E-value=6.3e-07 Score=99.12 Aligned_cols=245 Identities=12% Similarity=0.056 Sum_probs=145.3
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYA 266 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~ 266 (780)
.++.+..+| |+|.+|+.-...++ .+..+..++|+++ ++.+.-+.+ .++.+++.+-+. .+|++-..+..+.
T Consensus 87 ~~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~----~~~pee~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 87 DEVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD----QRVPEEINRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp HHHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC----TTSTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc----ccCcHHHHHHHHHhhhceeecCCHHHH
Confidence 345566788 89999986545455 4444456788753 344432211 133455655554 3788888888888
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEee-cCCCchhhhhhcCCchhHHHHHHHHHHcC---CCeEEEEecc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILP-VGVHMGRLESVLNLPATATKIKEIEKQFD---GKKLILGIDD 342 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P-~GId~~~~~~~~~~~~~~~~~~~lr~~~~---~~~vil~Vdr 342 (780)
++|++ .|+..+ +|.+.+ +++|.-.+.. ......+++++++ ++.+++..+|
T Consensus 159 ~~l~~-----~G~~~~---------------~I~vtGnp~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr 212 (385)
T 4hwg_A 159 RYLIA-----EGLPAE---------------LTFKSGSHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHR 212 (385)
T ss_dssp HHHHH-----TTCCGG---------------GEEECCCSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECC
T ss_pred HHHHH-----cCCCcC---------------cEEEECCchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCC
Confidence 88764 354211 233332 3455332211 0111234566663 4556666777
Q ss_pred cc---ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHH-hhccCCCCcccEEEecCC
Q 003999 343 MD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI-NEVYGSPNYEPVVLIDRP 418 (780)
Q Consensus 343 ld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~I-n~~~g~~~~~pV~~~~~~ 418 (780)
.. ..|++...++|++++.+++ +++ +|... ++. ++ +.+++. +. .+ ....|.+ .++
T Consensus 213 ~e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p~---~~----~~l~~~~~~-~~--~~~~v~l-~~~ 270 (385)
T 4hwg_A 213 EENVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HPR---TK----KRLEDLEGF-KE--LGDKIRF-LPA 270 (385)
T ss_dssp C-----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CHH---HH----HHHHTSGGG-GG--TGGGEEE-CCC
T ss_pred chhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------ChH---HH----HHHHHHHHH-hc--CCCCEEE-EcC
Confidence 54 4478999999999998766 543 43322 122 22 222222 10 11 1234664 457
Q ss_pred CCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC-CC-cEEEC
Q 003999 419 VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVN 495 (780)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~Vn 495 (780)
++..++..+|+.||+++..| |.+..||+++|. |+|+. +.++..+.+ .| +++|.
T Consensus 271 lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~-------------------Pvv~~~~~ter~e~v~~G~~~lv~ 326 (385)
T 4hwg_A 271 FSFTDYVKLQMNAFCILSDS-----GTITEEASILNL-------------------PALNIREAHERPEGMDAGTLIMSG 326 (385)
T ss_dssp CCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC-------------------CEEECSSSCSCTHHHHHTCCEECC
T ss_pred CCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC-------------------CEEEcCCCccchhhhhcCceEEcC
Confidence 88889999999999999777 446799999974 45553 333333444 24 56675
Q ss_pred CCCHHHHHHHHHHHHcCCH
Q 003999 496 PWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~ 514 (780)
+ |.+++++++.++|+++.
T Consensus 327 ~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 327 F-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp S-SHHHHHHHHHHHHTTCB
T ss_pred C-CHHHHHHHHHHHHhChH
Confidence 5 99999999999998764
No 58
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.67 E-value=4.8e-07 Score=98.28 Aligned_cols=246 Identities=11% Similarity=0.044 Sum_probs=146.9
Q ss_pred HHHHcCCCCCEEEEeCCccc--hHH-HHHHHh-cCCCcEEEEEeCCCCChhHhhcCCChHHHHH-hhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLM--VLP-TFLRKR-FNRIKLGFFLHSPFPSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~--llp-~~lr~~-~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~Dligf~t~~y 265 (780)
+...+++ .|+|.+|-..+. .++ .++++. ..++|+.+..|--||-. +..-+.....-+ .+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~--~~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLM--FSGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHH--CGGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhh--CccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4445554 599999876543 222 234442 13899999999877622 100011111112 244699999999876
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCC-CchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD 344 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld 344 (780)
.+.+.+ .|+.. .+| .+.++ |.. .. .+. ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~--~~---~~~---------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHP--TQ---APM---------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCC--CC---CCC---------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCcc--Cc---ccc---------cccCCCcEEEEeCCcc
Confidence 665543 23320 122 23333 211 00 000 0113468999999998
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHH
Q 003999 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
...++.. + .|+++ |+.+|... +. +.+ .|+|+ |.+|.+|+
T Consensus 189 k~~~L~~-------l---~~~~~----f~ivG~G~-----~~----------------~l~-----nV~f~-G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVKE-------W---KYDIP----LKVYTWQN-----VE----------------LPQ-----NVHKI-NYRPDEQL 227 (339)
T ss_dssp TCGGGGG-------C---CCSSC----EEEEESCC-----CC----------------CCT-----TEEEE-ECCCHHHH
T ss_pred hhhHHHh-------C---CCCCe----EEEEeCCc-----cc----------------CcC-----CEEEe-CCCCHHHH
Confidence 5332221 1 46666 88888432 10 011 37755 68999999
Q ss_pred HHHHHhcceeeeccCCcC---------CCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcE
Q 003999 425 SAYYAVAECCIVNAVRDG---------MNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI 492 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEG---------mnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al 492 (780)
.++|+.||+.++. .+| ++....|||||| .|+|++..++.++.+. .|+
T Consensus 228 ~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G-------------------~PVI~~~~~~~~~~v~~~~~G~ 286 (339)
T 3rhz_A 228 LMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG-------------------IPVIVQEGIANQELIENNGLGW 286 (339)
T ss_dssp HHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT-------------------CCEEEETTCTTTHHHHHHTCEE
T ss_pred HHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC-------------------CCEEEccChhHHHHHHhCCeEE
Confidence 9999999998887 233 467789999997 4889999888887772 378
Q ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
.++ +.++++++|.. +.+++++.+.+..+++..+....+.++.-+.
T Consensus 287 ~~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~l~ 331 (339)
T 3rhz_A 287 IVK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRLLT 331 (339)
T ss_dssp EES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHHHH
T ss_pred EeC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 887 57888888875 3455666655666666555444444444443
No 59
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.47 E-value=1.6e-07 Score=88.77 Aligned_cols=68 Identities=24% Similarity=0.266 Sum_probs=51.3
Q ss_pred CceEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC---hhhHHHHhccCC-CceEEecCc
Q 003999 591 RRAIFLDYDGTVVPETS-IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG---RSSLSEWLAPCE-MLGIAAEHG 659 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~-~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~~~f~~l~-~lgliaenG 659 (780)
.++|++|+||||++... ....+.+.++++|++|++. |+.|+|+|||+ ...+.+|+.... ...+++.|+
T Consensus 3 ~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred CeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHC-CCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 57999999999998431 1123456899999999985 99999999998 567778887642 234666664
No 60
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.22 E-value=2.1e-06 Score=89.15 Aligned_cols=68 Identities=15% Similarity=0.142 Sum_probs=51.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.|+|+||+||||++ . +.++++++++|++|.+. |++|+++|| |+...+.+.+..+. .-++++.||..+
T Consensus 5 ~~kli~~DlDGTLl~---~-~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 79 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYN---G-TEKIEEACEFVRTLKDR-GVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATA 79 (266)
T ss_dssp CCSEEEEECSSSTTC---H-HHHHHHHHHHHHHHHHT-TCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEeCcCceEe---C-CEeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHH
Confidence 468999999999998 3 44667899999999995 999999988 77777777776542 124666666544
No 61
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=98.15 E-value=9e-07 Score=92.01 Aligned_cols=68 Identities=19% Similarity=0.181 Sum_probs=54.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.+.|++|+||||++. ..+++.++++|++|.+. |+.|+++| ||++..+.+.+..+. .-.++++||..+
T Consensus 16 ~~~~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~ 90 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD----DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITA 90 (271)
T ss_dssp GCCEEEECCBTTTEET----TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred CCCEEEEcCcCcEEeC----CEECcCHHHHHHHHHHc-CCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHH
Confidence 4679999999999983 44678899999999985 99999999 999999988887642 113677777654
No 62
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.07 E-value=0.00028 Score=83.46 Aligned_cols=151 Identities=10% Similarity=0.050 Sum_probs=104.0
Q ss_pred CCCeEEEEeccccccCChHHH-HHHHHHHH--HhCCCCCC-ceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISLK-LLAMEQLL--QQHPGMRG-KVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~-l~A~~~ll--~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++..++..|.|+...||..+. |..+++++ ..+|+..- .+++|..|....+. .....+-+.+.++++.+|..-...
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 367899999999999999998 88888875 36765321 35676555443222 333456667888888887543323
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.-.|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|+.
T Consensus 627 ~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN--------------------GaLtigtlDGan 685 (824)
T 2gj4_A 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN--------------------GALTIGTMDGAN 685 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT--------------------TCEEEECSCTTH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CceEEEEecCcc
Confidence 333588776 3455556678999999999999 89999998888874 456666666765
Q ss_pred ccC----C--CcEEECCCCHHHHHHHH
Q 003999 486 PSL----S--GAIRVNPWDIDAVADAM 506 (780)
Q Consensus 486 ~~l----~--~al~VnP~d~~~~A~ai 506 (780)
.++ + +++++... .+++ +++
T Consensus 686 vEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 686 VEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred chhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 332 2 37888775 6666 444
No 63
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=98.06 E-value=3.6e-06 Score=77.87 Aligned_cols=49 Identities=20% Similarity=0.310 Sum_probs=40.0
Q ss_pred ceEEeCCCCCCCCCCCCC---CCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 592 RAIFLDYDGTVVPETSII---KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~---~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
|+|++|+||||++..... ..+++.+.++|++|.+. |+.++|+|||+...
T Consensus 2 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhC-CCeEEEEeCCChhh
Confidence 799999999999832110 15779999999999984 99999999999754
No 64
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.04 E-value=0.00023 Score=83.90 Aligned_cols=149 Identities=13% Similarity=0.048 Sum_probs=104.4
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHHH--hCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++..+++.|.|+...||..+ .|..++++++ .+|+.. ..+++|..|....+. .....+-+.+..+++.||..-...
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36788999999999999999 8888888765 466521 246777655443222 333456667888888888642222
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.-.|+|+. .....--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|+-
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGan 661 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN--------------------GALTVGTLDGAN 661 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT--------------------TCEEEECSCTTH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeeecCcCCee
Confidence 223488775 3455666678999999999999 89999998888874 456667777765
Q ss_pred ccC------CCcEEECCCCHHHHH
Q 003999 486 PSL------SGAIRVNPWDIDAVA 503 (780)
Q Consensus 486 ~~l------~~al~VnP~d~~~~A 503 (780)
.++ .+++++-. +.+++.
T Consensus 662 vEi~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 662 VEIAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp HHHHHHHCGGGSEECSC-CHHHHH
T ss_pred eehhhccCCCcEEEecC-CHHHHH
Confidence 443 24788877 777765
No 65
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.01 E-value=0.00012 Score=86.39 Aligned_cols=151 Identities=10% Similarity=0.087 Sum_probs=105.4
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHHH--hCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++..+++.|.|+...||..+ .|..++++++ .+|+.. ..+++|..|....+. .....+-+.+..+++.||..-...
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36789999999999999999 8999998875 566522 246777655443222 333456667888888888643223
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.-.|+|+. .....--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|+-
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGan 651 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN--------------------GALTLGTMDGAN 651 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT--------------------TCEEEEESSTHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeEEeccCCeE
Confidence 333588776 3455666678999999999999 89999999888874 455667666765
Q ss_pred ccC------CCcEEECC--CCHHHHHH
Q 003999 486 PSL------SGAIRVNP--WDIDAVAD 504 (780)
Q Consensus 486 ~~l------~~al~VnP--~d~~~~A~ 504 (780)
.++ .+++++-. .+++++-.
T Consensus 652 vEi~e~vG~~NgF~FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 652 VEIVDSVGEENAYIFGARVEELPALRE 678 (796)
T ss_dssp HHHHHHHCGGGSEEESCCTTTHHHHHH
T ss_pred eehhhhcCCCcEEEecCchhhHHHHHH
Confidence 443 24788876 66655543
No 66
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=97.89 E-value=5.9e-06 Score=85.68 Aligned_cols=68 Identities=24% Similarity=0.273 Sum_probs=52.5
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.|+|+||+||||++ .+ .+.++++++|++|.+. |++|+++|| |+...+.+.+..+. .-.+++.||...
T Consensus 7 ~~kli~~DlDGTLl~---~~-~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 81 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGK---SV-TPIPEGVEGVKKLKEL-GKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATA 81 (268)
T ss_dssp CCSEEEEECBTTTEE---TT-EECHHHHHHHHHHHHT-TCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEcCcCcEEC---CC-EeCcCHHHHHHHHHHc-CCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHH
Confidence 468999999999998 32 3567899999999995 999999999 67777777776542 124677777643
No 67
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=97.84 E-value=2e-05 Score=77.15 Aligned_cols=59 Identities=22% Similarity=0.157 Sum_probs=47.8
Q ss_pred cCceEEeCCCCCCCCCCCC---C----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSI---I----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~---~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..|+|+||+||||++.... . ...+++..++|++|++. |++++|+|||+...+...+..+
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~~l 72 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRIADL 72 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHHHHHc
Confidence 4689999999999984210 1 13567889999999985 9999999999999998888765
No 68
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=97.83 E-value=6.7e-06 Score=85.39 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=55.3
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.|+|+||+||||++ .++.+ ++++++|++|.+. |+.|+++| ||+...+.+.+..+. .-.+++.||+.+
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 78 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERLQEK-GIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATV 78 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHH
Confidence 368999999999999 55667 8999999999995 99999999 888888888887642 113667777654
Q ss_pred e
Q 003999 663 R 663 (780)
Q Consensus 663 r 663 (780)
.
T Consensus 79 ~ 79 (264)
T 3epr_A 79 D 79 (264)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=97.83 E-value=5.9e-06 Score=84.91 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=47.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l 649 (780)
..|+|+||+||||++.....+.+++.+.++++.|.+. |+.++++| ||+...+.+.+..+
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~~~~~~~~l~~~ 72 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRS-RLKVRFCTNESAASRAELVGQLQRL 72 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCCHHHHHHHHHHC
Confidence 4689999999999983100344667888889999884 99999999 99999888877653
No 70
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=97.76 E-value=0.00023 Score=78.12 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=61.7
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE----cCCCCcccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV----SEFIGCSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~~~ 487 (780)
|.+. +.++ ...++..||++|. .|-+.+..|||+||. |+|+ .+-.+.++.
T Consensus 286 v~~~-~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 338 (398)
T 4fzr_A 286 VLAA-GQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGV-------------------PQVSVPVIAEVWDSARL 338 (398)
T ss_dssp EEEE-SCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSGGGHHHHHH
T ss_pred EEEe-CcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCC-------------------CEEecCCchhHHHHHHH
Confidence 5544 5665 4567778999984 444678899999974 6666 333344444
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWAR 538 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~ 538 (780)
+ ..|+++++. |.++++++|.++|+++. .+.++.+ ..++.....+...++
T Consensus 339 ~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 339 LHAAGAGVEVPWEQAGVESVLAACARIRDDSS--YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHHTTSEEECC-------CHHHHHHHHHHCTH--HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHcCCEEecCcccCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHcCCCHHHHHH
Confidence 5 237888887 78999999999999874 3344444 455555566555444
No 71
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=97.69 E-value=8.9e-05 Score=78.69 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccCC---
Q 003999 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCE--- 650 (780)
Q Consensus 577 l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l~--- 650 (780)
++.+.+..- -.+.|+|+||+||||++.. .+.+.+.++|++|.+. |+.|+++| ||++..+.+.+..+.
T Consensus 9 ~~~~~~~~~--~~~~k~i~~D~DGTL~~~~----~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~ 81 (306)
T 2oyc_A 9 LRGAALRDV--LGRAQGVLFDCDGVLWNGE----RAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRFARLGFGG 81 (306)
T ss_dssp CCHHHHHHH--HHHCSEEEECSBTTTEETT----EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHH--HhhCCEEEECCCCcEecCC----ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHhcCCCc
Confidence 444444332 2247899999999999732 3556799999999995 99999999 688888877776542
Q ss_pred --CceEEecCccEE
Q 003999 651 --MLGIAAEHGYFI 662 (780)
Q Consensus 651 --~lgliaenG~~i 662 (780)
.-.+++.||+.+
T Consensus 82 ~~~~~i~~~~~~~~ 95 (306)
T 2oyc_A 82 LRAEQLFSSALCAA 95 (306)
T ss_dssp CCGGGEEEHHHHHH
T ss_pred CChhhEEcHHHHHH
Confidence 114666666544
No 72
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=97.64 E-value=0.00019 Score=78.73 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=96.3
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
++.+++++|++. .|+......+++.+ ++. +++ ++.++.+. .+.+++ +. + . ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~----~~~~~l----~~----~----~----~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPS----LDVSGL----GE----V----P----ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSS----CCCTTC----CC----C----C----TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCC----CChhhh----cc----C----C----CcE
Confidence 456788899996 66666666666655 333 222 34344322 100011 10 0 0 136
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----ccccC
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL 488 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (780)
.+. +.++ +..+|+.||++|.+| | ..+.+|||+||. |+|+.-..+ .++.+
T Consensus 295 ~~~-~~~~---~~~~l~~ad~~v~~~---g-~~t~~Ea~a~G~-------------------P~v~~p~~~~q~~~~~~v 347 (412)
T 3otg_A 295 RLE-SWVP---QAALLPHVDLVVHHG---G-SGTTLGALGAGV-------------------PQLSFPWAGDSFANAQAV 347 (412)
T ss_dssp EEE-SCCC---HHHHGGGCSEEEESC---C-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHHHHH
T ss_pred EEe-CCCC---HHHHHhcCcEEEECC---c-hHHHHHHHHhCC-------------------CEEecCCchhHHHHHHHH
Confidence 544 5563 778999999999765 3 268899999974 677744433 44555
Q ss_pred ---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
..|++++|. |.++++++|.++|++++ .++...+..+++...+++..-++.+.+
T Consensus 348 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (412)
T 3otg_A 348 AQAGAGDHLLPDNISPDSVSGAAKRLLAEES-YRAGARAVAAEIAAMPGPDEVVRLLPG 405 (412)
T ss_dssp HHHTSEEECCGGGCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHSCCHHHHHTTHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 248889887 89999999999999753 344434445666677777666665444
No 73
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.63 E-value=0.00035 Score=80.73 Aligned_cols=173 Identities=6% Similarity=-0.104 Sum_probs=105.6
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~ 413 (780)
..++.+..|+ .|..+..++++.+++++.|+-+ .++.+.+. +.+... .+.+++.+ ..|.. .|+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~---L~l~~~g~--~~g~~~-~~~~~~~~--~GI~~--------Rv~ 502 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV---HFHFALGQ--SNGITH-PYVERFIK--SYLGD--------SAT 502 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE---EEEEEESS--CCGGGH-HHHHHHHH--HHHGG--------GEE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE---EEEEecCC--CchhhH-HHHHHHHH--cCCCc--------cEE
Confidence 4556667775 7999999999999999999732 22222221 122222 22222221 22321 365
Q ss_pred EecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-----
Q 003999 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL----- 488 (780)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----- 488 (780)
+.+.++.++..+.|+.||+|+.|+.+.| |++.+|||+||. |+|...-.+.+.-+
T Consensus 503 -F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV-------------------PVVTl~G~~~asRvgaSlL 561 (631)
T 3q3e_A 503 -AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL-------------------VGVCKTGAEVHEHIDEGLF 561 (631)
T ss_dssp -EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC-------------------CEEEECCSSHHHHHHHHHH
T ss_pred -EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC-------------------CEEeccCCcHHHHhHHHHH
Confidence 4568899999999999999999998877 999999999963 55653222211111
Q ss_pred ---C-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh---CCHHHHHHHHHHHHHHHHH
Q 003999 489 ---S-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST---HDVAYWARSFAQDLERACR 549 (780)
Q Consensus 489 ---~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~---~~~~~Wa~~~l~~l~~~~~ 549 (780)
+ ...+| ..|.++.++...++.++++ .++...+++++.+.+ ++ .|.+.|-+.++++.+
T Consensus 562 ~~~GLpE~LI-A~d~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 562 KRLGLPEWLI-ANTVDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHTTCCGGGE-ESSHHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HhcCCCccee-cCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 0 12112 2378999999888888765 344444445544322 22 455666555555544
No 74
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=97.51 E-value=9.9e-05 Score=80.65 Aligned_cols=153 Identities=13% Similarity=0.097 Sum_probs=97.7
Q ss_pred CCeEEEEeccccccCCh-HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDMDIFKGI-SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi-~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
.+.+++++|++...|+. ...+.++.+. ++.|+++ +|.++. +.+.+.+ . .. . ..
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~-----~~~~~~l----~-------~~-~----~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVP-----PEHRALL----T-------DL-P----DN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECC-----GGGGGGC----T-------TC-C----TT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEEC-----Ccchhhc----c-------cC-C----CC
Confidence 35678889999887666 8888888888 8787765 555542 2221111 1 00 1 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC----CCcccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF----IGCSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~ 487 (780)
|.+ .+.++..+ ++..||++|. .|-..+..|+|+||. |+|+.-+ .+.+..
T Consensus 272 v~~-~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 272 ARI-AESVPLNL---FLRTCELVIC----AGGSGTAFTATRLGI-------------------PQLVLPQYFDQFDYARN 324 (391)
T ss_dssp EEE-CCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSTTHHHHHHH
T ss_pred EEE-eccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhCC-------------------CEEecCCcccHHHHHHH
Confidence 554 45677655 4499999985 344467899999974 5666322 233333
Q ss_pred C---CCcEEECC----CCHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHHHH
Q 003999 488 L---SGAIRVNP----WDIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWARSF 540 (780)
Q Consensus 488 l---~~al~VnP----~d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~ 540 (780)
+ ..|++++| .|.++++++|.++|+++. .+.++.+ ..++.....+...++.+
T Consensus 325 ~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTG--FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH--HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHcCCEEecCcccccCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4 23789998 899999999999999875 3333334 45555556666555543
No 75
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=97.43 E-value=0.018 Score=62.51 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=54.1
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc--------ccC---CC
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS--------PSL---SG 490 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--------~~l---~~ 490 (780)
+++..+|+.||++|..| | +.+..|+++||. |.|+.-+.+.. ..+ ..
T Consensus 244 ~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~-------------------P~Ilip~p~~~~~~Q~~NA~~l~~~G~ 300 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRA---G-ALTVSELTAAGL-------------------PAFLVPLPHAIDDHQTRNAEFLVRSGA 300 (365)
T ss_dssp SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC-------------------CEEECC-----CCHHHHHHHHHHTTTS
T ss_pred hhhhhhhccceEEEecC---C-cchHHHHHHhCC-------------------CeEEeccCCCCCcHHHHHHHHHHHCCC
Confidence 47899999999988543 5 577889999974 55554443322 223 23
Q ss_pred cEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh
Q 003999 491 AIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV 528 (780)
Q Consensus 491 al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V 528 (780)
|++++.. +.++++++|.++|++|+ .++.+.++.++..
T Consensus 301 a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 301 GRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLA 339 (365)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTC
T ss_pred EEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcC
Confidence 7788765 48999999999999874 2333334444433
No 76
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.41 E-value=0.00012 Score=71.87 Aligned_cols=60 Identities=23% Similarity=0.049 Sum_probs=48.0
Q ss_pred ccCceEEeCCCCCCCCCC---------------------CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCC-hhhHHHHh
Q 003999 589 TERRAIFLDYDGTVVPET---------------------SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG-RSSLSEWL 646 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~---------------------~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~f 646 (780)
...|+|+||+||||++.. .....+.+.+.++|++|++. |++++|+||++ ...+..++
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~~~~~~~~l 103 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSEIEGANQLL 103 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSCHHHHHHHH
T ss_pred hccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCChHHHHHHH
Confidence 457899999999999531 01235678899999999985 99999999999 78888888
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 104 ~~~ 106 (187)
T 2wm8_A 104 ELF 106 (187)
T ss_dssp HHT
T ss_pred HHc
Confidence 754
No 77
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=97.37 E-value=7.4e-05 Score=71.25 Aligned_cols=59 Identities=22% Similarity=0.182 Sum_probs=47.7
Q ss_pred cCceEEeCCCCCCCCCCCC-------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSI-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..|+|+||+||||++.... ....++.+.++|+.|++. |.+++|+||++...+...+..+
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~~~ 73 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRDSAPLITRLKEL 73 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCCCHHHHHHHHHT
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCCcHHHHHHHHHc
Confidence 4789999999999973210 122457789999999985 9999999999999999888765
No 78
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=97.36 E-value=0.00042 Score=76.73 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=67.2
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|.+. +.+++. .+|+.||++|..+ |. .+.+|||+||. |+|+.-..| .++.
T Consensus 285 v~~~-~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~i~~p~~~~q~~~a~~ 337 (430)
T 2iyf_A 285 VEVH-DWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT-------------------PMIAVPQAVDQFGNADM 337 (430)
T ss_dssp EEEE-SSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHH
T ss_pred eEEE-ecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC-------------------CEEECCCccchHHHHHH
Confidence 6544 567765 6899999988754 44 68999999974 777776544 2333
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~l 541 (780)
+ ..|+.+++. |.++++++|.++|+.++ .+.++.+ .++......+...++.+.
T Consensus 338 ~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 338 LQGLGVARKLATEEATADLLRETALALVDDPE--VARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HHHTTSEEECCCC-CCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3 247888887 88999999999998643 3334444 344444555555555443
No 79
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=97.33 E-value=9.5e-05 Score=70.63 Aligned_cols=59 Identities=14% Similarity=0.013 Sum_probs=42.3
Q ss_pred cCceEEeCCCCCCCCCCC---CCC----CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETS---IIK----SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~---~~~----~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.|+|+||+||||++... ... ........+|+.|++. |.+++|+||++...++..+..+
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 68 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRRAEKL 68 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHHHHHT
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHc
Confidence 468999999999998321 010 0111122358888884 8999999999999999888765
No 80
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=97.18 E-value=9.6e-05 Score=76.97 Aligned_cols=59 Identities=25% Similarity=0.285 Sum_probs=45.1
Q ss_pred ccCceEEeCCCCCCCCCCC----------------------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC---hhhHH
Q 003999 589 TERRAIFLDYDGTVVPETS----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG---RSSLS 643 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~----------------------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~ 643 (780)
.+.++|+||+||||++..+ ....+.+.+.++|+.|.+. |++++|+|||+ +..+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCchhHHHHHH
Confidence 3568999999999998420 0145678999999999995 99999999999 44555
Q ss_pred HHhcc
Q 003999 644 EWLAP 648 (780)
Q Consensus 644 ~~f~~ 648 (780)
+.+..
T Consensus 136 ~~L~~ 140 (258)
T 2i33_A 136 KNLER 140 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 81
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.16 E-value=0.00028 Score=68.22 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=39.6
Q ss_pred CceEEeCCCCCCCCCCC------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 591 RRAIFLDYDGTVVPETS------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
.|+||||+||||+.... ....+.+.+.++|++|++. |.+++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 37999999999997431 1235678999999999995 999999999986
No 82
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=97.15 E-value=8.1e-05 Score=77.13 Aligned_cols=67 Identities=13% Similarity=0.063 Sum_probs=49.3
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc---cC--C--CceEEecCccEEe
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA---PC--E--MLGIAAEHGYFIR 663 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~---~l--~--~lgliaenG~~ir 663 (780)
|+|++|+||||++ ..... +.+.++|++|++. |+.|+++|||+......++. .+ + ...+++.||+.+.
T Consensus 2 k~i~~D~DGtL~~---~~~~~-~~~~~~l~~l~~~-g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~ 75 (263)
T 1zjj_A 2 VAIIFDMDGVLYR---GNRAI-PGVRELIEFLKER-GIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRL 75 (263)
T ss_dssp EEEEEECBTTTEE---TTEEC-TTHHHHHHHHHHH-TCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred eEEEEeCcCceEe---CCEeC-ccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHH
Confidence 6899999999997 33333 6789999999984 99999999999765554443 22 1 1257888887653
No 83
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=97.08 E-value=0.00026 Score=69.95 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=43.3
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHH-------HHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVIS-------VLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~-------~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.++|+||+||||++.........+++.+ .|+.|++. |.+++|+||++...+...+..+
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~~~~~~~~l~~l 83 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAA-GIQVAIITTAQNAVVDHRMEQL 83 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHT-TCEEEEECSCCSHHHHHHHHHH
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHC-CCeEEEEeCcChHHHHHHHHHc
Confidence 467899999999999832111111122222 48888884 9999999999999998888764
No 84
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=97.04 E-value=0.0051 Score=66.78 Aligned_cols=137 Identities=9% Similarity=-0.014 Sum_probs=85.3
Q ss_pred CeEEEEecccccc-------CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003999 334 KKLILGIDDMDIF-------KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (780)
Q Consensus 334 ~~vil~Vdrld~~-------KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~ 406 (780)
..+++++|++... +.+...++|++++ +++ ++.++. +++.+ ++.. + .
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~~----~l~~----~----~- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVAE----ALRA----E----V- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHHH----HHHH----H----C-
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCHH----hhCC----C----C-
Confidence 5688999999875 5666777776542 333 443331 22221 2221 1 1
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC---
Q 003999 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG--- 483 (780)
Q Consensus 407 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--- 483 (780)
..|.+ +.++.. .+|..||++|..+ | ..+..|+|+||. |+|+.-+.+
T Consensus 264 ---~~v~~--~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G~-------------------P~v~~p~~~dq~ 312 (384)
T 2p6p_A 264 ---PQARV--GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAGV-------------------PQLLIPKGSVLE 312 (384)
T ss_dssp ---TTSEE--ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTTC-------------------CEEECCCSHHHH
T ss_pred ---CceEE--cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhCC-------------------CEEEccCcccch
Confidence 12543 567754 4679999999753 4 457899999974 667665533
Q ss_pred -ccccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 484 -CSPSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 484 -~~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+..
T Consensus 313 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 313 APARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHh
Confidence 33333 237888875 7899999999999865 345555555555544
No 85
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.01 E-value=0.0012 Score=63.23 Aligned_cols=132 Identities=15% Similarity=0.138 Sum_probs=83.6
Q ss_pred CCeEEEEecccc---ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 333 GKKLILGIDDMD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 333 ~~~vil~Vdrld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
...+++++|++. +.|++...++|++++ + ++ ++.++.+.. .+ ..+
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~-----------------~~~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD-----------------TLG---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT-----------------TCC----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc-----------------cCC----
Confidence 467899999984 677777777777532 2 22 333432211 00 011
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CS 485 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 485 (780)
..|.+ .+.++..++.++ ..||++|.. -| +.+..|+|+||. |+|+..+.+ .+
T Consensus 68 ~~v~~-~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~-------------------P~i~~p~~~~Q~~na 122 (170)
T 2o6l_A 68 LNTRL-YKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI-------------------PMVGIPLFADQPDNI 122 (170)
T ss_dssp TTEEE-ESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHH
T ss_pred CcEEE-ecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC-------------------CEEeccchhhHHHHH
Confidence 13554 467888776654 999999963 34 489999999974 666665532 23
Q ss_pred ccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003999 486 PSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKH 524 (780)
Q Consensus 486 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~ 524 (780)
..+ ..|+.+++. +.++++++|.++++.+ +.+.++++.
T Consensus 123 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~~ 164 (170)
T 2o6l_A 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVINDP--SYKENVMKL 164 (170)
T ss_dssp HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHH
T ss_pred HHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 333 237888876 8899999999999864 334444443
No 86
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=96.98 E-value=0.00033 Score=63.99 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=43.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.|+|++|+||||.. ...+.+.+.++|++|++. |.+++|+|+++...+...+..
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l~~ 54 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGAAPIRE 54 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGGHHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHH
Confidence 47899999999954 334668899999999985 999999999998887666654
No 87
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=96.92 E-value=0.00065 Score=66.72 Aligned_cols=63 Identities=16% Similarity=0.126 Sum_probs=46.1
Q ss_pred HHhccCceEEeCCCCCCCCCCCC---CC----CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 586 YRKTERRAIFLDYDGTVVPETSI---IK----SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 586 y~~a~~rlI~lD~DGTL~~~~~~---~~----~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++..+.|+|+||+||||++.... .. ........+|+.|++. |+.++|+||++...++.++..+
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~~~~~~~~l~~l 90 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTS-DIEVAIITGRKAKLVEDRCATL 90 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTT-TCEEEEECSSCCHHHHHHHHHH
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHC-CCeEEEEeCCChHHHHHHHHHc
Confidence 45567899999999999983210 11 1122333478888884 9999999999999998888754
No 88
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=96.91 E-value=0.00089 Score=66.39 Aligned_cols=58 Identities=14% Similarity=0.081 Sum_probs=45.0
Q ss_pred ccCceEEeCCCCCCCCCCCC----------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 589 TERRAIFLDYDGTVVPETSI----------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~----------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+..++|+||+||||++.... ...+-+.+.++|+.|++. |.+++|+||+....+.+..+
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 35689999999999984311 113457899999999985 89999999999988766554
No 89
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=96.90 E-value=0.00047 Score=69.23 Aligned_cols=53 Identities=11% Similarity=0.183 Sum_probs=43.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
.|+|+||+||||++ .....++. .++++.|.+. |+.++++| ||+...+.+.+..
T Consensus 3 ~k~i~fDlDGTLl~---~~~~~~~~-~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~~~ 58 (250)
T 2c4n_A 3 IKNVICDIDGVLMH---DNVAVPGA-AEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCEEEEECBTTTEE---TTEECTTH-HHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHHH
T ss_pred ccEEEEcCcceEEe---CCEeCcCH-HHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHHHH
Confidence 57999999999998 44445555 8888888884 89999999 9998888777754
No 90
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=96.83 E-value=0.00086 Score=67.09 Aligned_cols=59 Identities=24% Similarity=0.197 Sum_probs=46.2
Q ss_pred cCceEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCC---------------hhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRG---------------RSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~---------------~~~L~~~f~~l 649 (780)
+.+++++|+||||+..... ...+.+.+.++|++|++. |.+++|+|+++ ...+...+..+
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR 102 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHC-CCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc
Confidence 4679999999999974311 135678899999999995 99999999999 46677666543
No 91
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=96.73 E-value=0.0014 Score=66.81 Aligned_cols=54 Identities=24% Similarity=0.268 Sum_probs=40.8
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
..|+|+||+||||++ ..... +++.++++.|.+. |+.++++| ||+...+.+.+..
T Consensus 6 ~ik~i~fDlDGTLld---~~~~~-~~~~~ai~~l~~~-G~~~~~~t~~~~~~~~~~~~~l~~ 62 (259)
T 2ho4_A 6 ALKAVLVDLNGTLHI---EDAAV-PGAQEALKRLRAT-SVMVRFVTNTTKETKKDLLERLKK 62 (259)
T ss_dssp CCCEEEEESSSSSCC------CC-TTHHHHHHHHHTS-SCEEEEEECCSSCCHHHHHHHHHH
T ss_pred hCCEEEEeCcCcEEe---CCEeC-cCHHHHHHHHHHC-CCeEEEEeCCCCcCHHHHHHHHHH
Confidence 468999999999998 33333 5678889999985 99999999 6666666666654
No 92
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=96.66 E-value=0.0009 Score=69.86 Aligned_cols=55 Identities=18% Similarity=0.271 Sum_probs=45.2
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l 649 (780)
+.++|+||+||||++.. .+.+.+.++|++|.+. |+.|+++|| |+...+.+.+..+
T Consensus 13 ~~k~i~~D~DGtL~~~~----~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN----GLLPGIENTFDYLKAQ-GQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GCSEEEECSBTTTEETT----EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEcCcCCcCcCC----eeChhHHHHHHHHHHC-CCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 57899999999999832 2456789999999985 999999995 8888887777654
No 93
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=96.55 E-value=2.6e-05 Score=84.11 Aligned_cols=67 Identities=13% Similarity=0.025 Sum_probs=46.6
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh---hhHH---HHh--ccCC-CceEEecC
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR---SSLS---EWL--APCE-MLGIAAEH 658 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~---~~f--~~l~-~lgliaen 658 (780)
....++|+||+||||++.. . .++|.++... ++.|+++|||+. ..+. .++ ..+. ...+++.|
T Consensus 18 ~~~~kli~fDlDGTLld~~---~------~~~l~~~~~~-g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~n 87 (332)
T 1y8a_A 18 YFQGHMFFTDWEGPWILTD---F------ALELCMAVFN-NARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAA 87 (332)
T ss_dssp --CCCEEEECSBTTTBCCC---H------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHT
T ss_pred CCCceEEEEECcCCCcCcc---H------HHHHHHHHHC-CCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcC
Confidence 3456899999999999832 1 1677777774 788999999999 5554 444 3221 12477889
Q ss_pred ccEEee
Q 003999 659 GYFIRW 664 (780)
Q Consensus 659 G~~ir~ 664 (780)
|+.+..
T Consensus 88 Ga~i~~ 93 (332)
T 1y8a_A 88 GVKNRD 93 (332)
T ss_dssp TCCHHH
T ss_pred CcEEEE
Confidence 998764
No 94
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=96.55 E-value=0.0016 Score=63.08 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=40.4
Q ss_pred HhccCceEEeCCCCCCCCCCCC---CCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 587 RKTERRAIFLDYDGTVVPETSI---IKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~---~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+..+.|+|++|+||||++..-. ... .+-.-..+|+.|++. |++++|+||+ ..++..+.
T Consensus 5 ~~~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~-Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 5 KLKEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKKS-GIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp --CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHHT-TCEEEEECSS--CCCHHHHH
T ss_pred hHhcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHHC-CCEEEEEeCc--HHHHHHHH
Confidence 4567899999999999984311 111 112223478899885 9999999999 66777776
No 95
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=96.53 E-value=0.00065 Score=67.50 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=44.4
Q ss_pred hccCceEEeCCCCCCCCCCCCC-------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 588 KTERRAIFLDYDGTVVPETSII-------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~-------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..+.|+|+||+||||++..... ......-...|+.|++. |.+++|+||++...+...+..+
T Consensus 22 ~~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~~~~~~~~l~~l 89 (195)
T 3n07_A 22 AKQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNA-GIEIAIITGRRSQIVENRMKAL 89 (195)
T ss_dssp HHTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHT
T ss_pred HhCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHC-CCEEEEEECcCHHHHHHHHHHc
Confidence 3567999999999999832111 11112223348888885 9999999999999999888765
No 96
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=96.48 E-value=0.00066 Score=66.03 Aligned_cols=59 Identities=19% Similarity=0.193 Sum_probs=42.2
Q ss_pred cCceEEeCCCCCCCCCCCCC---CCC----CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSII---KSP----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~---~~p----s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.|+|+||+||||++..... ... .-.---+|+.|++. |.+++|+||+....++..+..+
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~l 76 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKS-GLTMLILSTEQNPVVAARARKL 76 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHH
T ss_pred cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHC-CCeEEEEECcChHHHHHHHHHc
Confidence 46899999999999832110 010 11111168888885 9999999999999999888765
No 97
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=96.42 E-value=0.0016 Score=66.89 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=49.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc----C--C--CceEEecCccE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP----C--E--MLGIAAEHGYF 661 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~----l--~--~lgliaenG~~ 661 (780)
+.++|+||+||||++ ..... +.+.++|+.|.+. |..++++|||+......++.. + + .-.+++.+|..
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l~~~-g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 78 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLAT 78 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHH
Confidence 368999999999998 33334 6888999999985 999999999988766655442 2 1 12366666664
Q ss_pred E
Q 003999 662 I 662 (780)
Q Consensus 662 i 662 (780)
+
T Consensus 79 ~ 79 (264)
T 1yv9_A 79 I 79 (264)
T ss_dssp H
T ss_pred H
Confidence 3
No 98
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=96.29 E-value=0.0032 Score=61.55 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=45.6
Q ss_pred CceEEeCCCCCCCCCCC-----------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh---hhHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETS-----------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR---SSLSEWLAPC 649 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~-----------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~f~~l 649 (780)
.++|+||+||||+.... ....+-+.+.++|++|++. |.+++|+|+++. ..+...+..+
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l~~~ 74 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATSDTEVIKRVLTNF 74 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCccchHHHHHHHHhc
Confidence 57999999999976221 1135668999999999995 999999999886 7777777654
No 99
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=96.27 E-value=0.0027 Score=69.53 Aligned_cols=70 Identities=16% Similarity=0.091 Sum_probs=56.6
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCC-----CC----C-----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPET-----SI----I-----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~-----~~----~-----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
.+..++.+.+..+.|+|++|+||||++-. .. . ..+.+.+.+.|+.|++. |++++|+|+++...++
T Consensus 209 ~~~~~~~~l~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~-Gi~laI~Snn~~~~v~ 287 (387)
T 3nvb_A 209 RTIDIIAAIQGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNR-GIIIAVCSKNNEGKAK 287 (387)
T ss_dssp HHHHHHHHHTTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHT-TCEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHH
Confidence 44667778888899999999999999832 10 0 12347899999999995 9999999999999999
Q ss_pred HHhcc
Q 003999 644 EWLAP 648 (780)
Q Consensus 644 ~~f~~ 648 (780)
..+..
T Consensus 288 ~~l~~ 292 (387)
T 3nvb_A 288 EPFER 292 (387)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98865
No 100
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.22 E-value=0.0017 Score=65.04 Aligned_cols=59 Identities=24% Similarity=0.306 Sum_probs=46.9
Q ss_pred cCceEEeCCCCCCCCCCC-----CCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh---------------hhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR---------------SSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~-----~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~---------------~~L~~~f~~l 649 (780)
..+++++|+||||+.... ....+.+.+.++|++|++. |.+++|+|+++. ..+...+..+
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 108 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE 108 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc
Confidence 468999999999998421 1245778999999999985 999999999998 6677767654
No 101
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=96.22 E-value=0.0016 Score=63.96 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=43.4
Q ss_pred ccCceEEeCCCCCCCCCCCC---CCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSI---IKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~---~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.|+|+||+||||++.... ... ....--.+|+.|++. |.+++|+||+....++..+..+
T Consensus 17 ~~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~l 83 (189)
T 3mn1_A 17 KAIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIAS-GVTTAIISGRKTAIVERRAKSL 83 (189)
T ss_dssp HTCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHH
T ss_pred HhCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHC-CCEEEEEECcChHHHHHHHHHc
Confidence 46799999999999984210 000 111112378888885 9999999999999998888765
No 102
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=96.16 E-value=0.0016 Score=65.36 Aligned_cols=63 Identities=19% Similarity=0.281 Sum_probs=44.0
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHhccC
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSI-------------------------------IKSPGPEVISVLKTLCSD 626 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~-------------------------------~~~ps~~~~~~L~~L~~d 626 (780)
++++|...-...+.++|+||+||||++..+. ...+.+.+.++|+.|++.
T Consensus 24 ~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~ 103 (211)
T 2b82_A 24 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR 103 (211)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH
T ss_pred eHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC
Confidence 3555553322234789999999999983210 011346788999999985
Q ss_pred CCCEEEEEcCCChhh
Q 003999 627 PNNTVFIVSGRGRSS 641 (780)
Q Consensus 627 ~g~~V~IvSGR~~~~ 641 (780)
|.+++|+|+++...
T Consensus 104 -G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 104 -GDAIFFVTGRSPTK 117 (211)
T ss_dssp -TCEEEEEECSCCCS
T ss_pred -CCEEEEEcCCcHHH
Confidence 99999999997653
No 103
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=95.93 E-value=0.0058 Score=59.72 Aligned_cols=32 Identities=6% Similarity=-0.149 Sum_probs=23.3
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 746 QHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 746 ~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+.++.+.+.+|+.+++.+++.+++++.+|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 168 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKGLIDGEVI 168 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGGGCCSEEE
T ss_pred CceeccCCCCCCcccHHHHHHHHhCCCCCCEE
Confidence 44556777777888888888888788777664
No 104
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=95.81 E-value=0.0048 Score=59.78 Aligned_cols=49 Identities=22% Similarity=0.384 Sum_probs=38.6
Q ss_pred hccCceEEeCCCCCCCCCCC--------CCCCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 588 KTERRAIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~--------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
-+..|++++|.||||+...+ ....+-+.+.++|+.|++. |.+++|+|+.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 35789999999999987421 1235668999999999985 9999999998
No 105
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=95.72 E-value=0.013 Score=58.36 Aligned_cols=36 Identities=6% Similarity=0.051 Sum_probs=31.2
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|++. |.+++|+||.....++.++..+
T Consensus 94 ~~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 94 TVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 56788899999985 9999999999999988888765
No 106
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=95.58 E-value=0.029 Score=60.73 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=64.5
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC-----CCccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-----IGCSP 486 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~~~ 486 (780)
|.+ .+.++.. .+++.||++|..+ |. .+..|++++|. |+|+.-. .+.+.
T Consensus 283 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 283 VEA-HQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGV-------------------PLVLVPHFATEAAPSAE 335 (402)
T ss_dssp EEE-ESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTC-------------------CEEECGGGCGGGHHHHH
T ss_pred EEE-ecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCC-------------------CEEEeCCCcccHHHHHH
Confidence 554 4567765 8899999988765 33 46799999974 5554322 23333
Q ss_pred cC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 487 SL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 487 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
.+ ..|+.+++. +.+++++++.++|+++ +.+.++++..+.+ ......+-++.+.
T Consensus 336 ~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (402)
T 3ia7_A 336 RVIELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVE 394 (402)
T ss_dssp HHHHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHH
Confidence 33 237888876 8999999999999875 3444455544444 3344444444433
No 107
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=95.53 E-value=0.048 Score=60.44 Aligned_cols=146 Identities=9% Similarity=-0.017 Sum_probs=84.2
Q ss_pred CeEEEEecccccc-----CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 334 KKLILGIDDMDIF-----KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 334 ~~vil~Vdrld~~-----KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
..|+++.|++... |++...++|+..+ +++ +|.++.. .+.+++ . ...
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~-----~~~~~l----~--------~~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDA-----QQLEGV----A--------NIP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCT-----TTTSSC----S--------SCC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECC-----cchhhh----c--------cCC---
Confidence 4688999998764 8888888887643 232 4433321 111001 0 011
Q ss_pred cccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----c
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----C 484 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 484 (780)
..|. +.+.+++. .+|..||++|. +-| ..+..|+++||. |+|+.-+.+ .
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~---~~G-~~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~n 370 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVH---HGG-PGSWHTAAIHGV-------------------PQVILPDGWDTGVR 370 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEE---CCC-HHHHHHHHHTTC-------------------CEEECCCSHHHHHH
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEE---CCC-HHHHHHHHHhCC-------------------CEEEeCCcccHHHH
Confidence 1354 45678764 45799999996 344 457899999974 667665533 2
Q ss_pred cccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHH
Q 003999 485 SPSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWAR 538 (780)
Q Consensus 485 ~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~ 538 (780)
++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+ .......-++
T Consensus 371 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 371 AQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp HHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3333 247888875 8899999999999865 3444555544444 3344444333
No 108
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=95.49 E-value=0.0068 Score=59.03 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+++.+.++|+.|.+. |..++|+|||....+...+..+
T Consensus 77 l~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 113 (211)
T 1l7m_A 77 PTEGAEETIKELKNR-GYVVAVVSGGFDIAVNKIKEKL 113 (211)
T ss_dssp BCTTHHHHHHHHHHT-TEEEEEEEEEEHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHc
Confidence 456788899999984 9999999999988877666543
No 109
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=95.38 E-value=0.0071 Score=59.14 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+-+.+.++|+.|++.+|.+++|+|+++...+..++.
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~ 109 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGE 109 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHH
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHH
Confidence 447888999999873278999999998766554443
No 110
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=95.29 E-value=0.053 Score=59.21 Aligned_cols=100 Identities=19% Similarity=0.069 Sum_probs=63.3
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC----Ccccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI----GCSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~----G~~~~ 487 (780)
|.+. +.++.. .++..||++|..+ |. .+..|++++|. |+|+--+. ..+..
T Consensus 299 v~~~-~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 299 VEAH-RWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGR-------------------PLVVVPQSFDVQPMARR 351 (415)
T ss_dssp EEEE-SCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTC-------------------CEEECCCSGGGHHHHHH
T ss_pred EEEE-ecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCC-------------------CEEEeCCcchHHHHHHH
Confidence 5544 567765 7888999988764 43 46789999974 55552222 22333
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSF 540 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~ 540 (780)
+ ..|+.+++. +.++++++|.++|+++ +.+.++++..+.+ ......+.++.+
T Consensus 352 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 408 (415)
T 3rsc_A 352 VDQLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAV 408 (415)
T ss_dssp HHHHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3 237788775 8999999999999875 3444555544444 334444444433
No 111
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=95.23 E-value=0.015 Score=58.35 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=43.0
Q ss_pred ccCceEEeCCCCCCCCCCCC---C----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSI---I----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~---~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.|+|+||+||||++.... . ......---+|+.|++. |.+++|+||+....++..+..+
T Consensus 47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~-G~~l~I~T~~~~~~~~~~l~~l 113 (211)
T 3ij5_A 47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITS-DIDVAIITGRRAKLLEDRANTL 113 (211)
T ss_dssp TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHH
T ss_pred hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 45799999999999984210 0 00111111278888885 9999999999999998888765
No 112
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.16 E-value=0.0065 Score=62.93 Aligned_cols=59 Identities=17% Similarity=0.320 Sum_probs=44.1
Q ss_pred cCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh----hhH
Q 003999 590 ERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR----SSL 642 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~----~~L 642 (780)
++.+|+||+||||++..+. ...+-+.++++|+.|.+. |+.|+|+|||+. ...
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccccHHHH
Confidence 3459999999999985311 123446889999999995 999999999975 466
Q ss_pred HHHhccC
Q 003999 643 SEWLAPC 649 (780)
Q Consensus 643 ~~~f~~l 649 (780)
..++..+
T Consensus 136 ~~~L~~l 142 (260)
T 3pct_A 136 VDDMKRL 142 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6777653
No 113
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=95.12 E-value=0.0099 Score=59.66 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |..++|+|+.+...+...+..+
T Consensus 108 ~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 142 (240)
T 2no4_A 108 PDAAETLEKLKSA-GYIVAILSNGNDEMLQAALKAS 142 (240)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhc
Confidence 5567888999885 8999999999998888877654
No 114
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=94.94 E-value=0.0075 Score=62.51 Aligned_cols=60 Identities=18% Similarity=0.261 Sum_probs=44.9
Q ss_pred ccCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh----hh
Q 003999 589 TERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR----SS 641 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~----~~ 641 (780)
.++.+|+||+||||++..+. ...+-+.+.++|+.|.+. |+.|+|+|||+. ..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccchHHH
Confidence 45679999999999985310 112345788899999995 999999999975 46
Q ss_pred HHHHhccC
Q 003999 642 LSEWLAPC 649 (780)
Q Consensus 642 L~~~f~~l 649 (780)
...++..+
T Consensus 135 T~~~L~~l 142 (262)
T 3ocu_A 135 TIDDMKRL 142 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66777653
No 115
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=94.82 E-value=0.094 Score=57.05 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=83.7
Q ss_pred CCeEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
.+.+++++|++... |+......+++.+.+ . +++ +|.++.+. +.+. +.. .. ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~----l~~--------~~----~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISP----LGT--------LP----RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGG----GCS--------CC----TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhh----hcc--------CC----Cc
Confidence 45788889999655 355555455554432 2 333 55454322 1001 110 01 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE----cCCCCcc--
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV----SEFIGCS-- 485 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~-- 485 (780)
|.+. +.++. ..++..||++|. .|-..+..|+++||. |+|+ .+-.+.+
T Consensus 285 v~~~-~~~~~---~~ll~~ad~~v~----~~G~~t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 285 VRAV-GWTPL---HTLLRTCTAVVH----HGGGGTVMTAIDAGI-------------------PQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp EEEE-SSCCH---HHHHTTCSEEEE----CCCHHHHHHHHHHTC-------------------CEEECCCTTCCSSCTTH
T ss_pred EEEE-ccCCH---HHHHhhCCEEEE----CCCHHHHHHHHHhCC-------------------CEEEcCCCchhHHHHHH
Confidence 5544 56664 456778999984 344457899999974 5666 4555666
Q ss_pred ccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHHHH
Q 003999 486 PSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWARSF 540 (780)
Q Consensus 486 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~ 540 (780)
+.+ ..|+.+++. +.++++ ++|+++ +.+.++++ ..+......+...++.+
T Consensus 338 ~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 338 EAVSRRGIGLVSTSDKVDADLLR----RLIGDE--SLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHHHTSEEECCGGGCCHHHHH----HHHHCH--HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHCCCEEeeCCCCCCHHHHH----HHHcCH--HHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 666 247888876 455555 777764 34444444 44555556666555543
No 116
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=94.44 E-value=0.016 Score=56.53 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|.+. |..++|+|+.....+...+..+
T Consensus 72 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 107 (205)
T 3m9l_A 72 APGAVELVRELAGR-GYRLGILTRNARELAHVTLEAI 107 (205)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred CccHHHHHHHHHhc-CCeEEEEeCCchHHHHHHHHHc
Confidence 34677889999984 8999999999999888887654
No 117
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=94.28 E-value=0.037 Score=54.52 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=28.8
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.+.+.++|+.|++. |.+++|+|+.+...+...+..
T Consensus 98 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~ 132 (230)
T 3um9_A 98 FADVPQALQQLRAA-GLKTAILSNGSRHSIRQVVGN 132 (230)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHHHHH
Confidence 45677889999884 899999999999888777764
No 118
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=94.19 E-value=0.017 Score=57.19 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=36.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHh-ccCCCCEEEEEcCCChhh-HHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL-CSDPNNTVFIVSGRGRSS-LSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L-~~d~g~~V~IvSGR~~~~-L~~~f~~ 648 (780)
.|+|+||+||||++ ......+.+.++++++ -......+...+||+... +..++..
T Consensus 4 ~k~iifDlDGTL~d---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 60 (234)
T 2hcf_A 4 RTLVLFDIDGTLLK---VESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60 (234)
T ss_dssp CEEEEECCBTTTEE---ECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCccc---CccchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHH
Confidence 57999999999998 4444556677778774 322223566789999877 6666654
No 119
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=94.17 E-value=0.026 Score=62.67 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=38.1
Q ss_pred cCceEEeCCCCCCCCCCCC--------C-CCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 590 ERRAIFLDYDGTVVPETSI--------I-KSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~--------~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
+.++++||+||||+...+. + ..+-+.+.++|+.|++. |.+++|+|+++
T Consensus 57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 5789999999999863210 1 12568899999999995 99999999966
No 120
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=94.13 E-value=0.075 Score=54.71 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHhccCCCC--EEEEEcCCChhhHHHHhcc
Q 003999 612 PGPEVISVLKTLCSDPNN--TVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~--~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.+.++|+.|.+. |. +++|+|+.....+...+..
T Consensus 143 ~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~l~~ 180 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRCLRL 180 (282)
T ss_dssp CCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHHHHHHH
T ss_pred cChhHHHHHHHHHhC-CCCceEEEEECCChHHHHHHHHh
Confidence 457788999999985 89 9999999998888777654
No 121
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=94.01 E-value=0.037 Score=58.97 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+||.....++.++..+
T Consensus 180 l~pg~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l~~l 216 (317)
T 4eze_A 180 LSPGLLTILPVIKAK-GFKTAIISGGLDIFTQRLKARY 216 (317)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHH
T ss_pred ECcCHHHHHHHHHhC-CCEEEEEeCccHHHHHHHHHHc
Confidence 456788999999995 9999999999998888877654
No 122
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=93.94 E-value=0.03 Score=60.65 Aligned_cols=53 Identities=17% Similarity=0.289 Sum_probs=40.0
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCC---ChhhHHHHh
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGR---GRSSLSEWL 646 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR---~~~~L~~~f 646 (780)
++.+.++||+||||+.. . .+-+.+.++|+.|++. |.+++++|++ +.....+.+
T Consensus 11 ~~~~~~l~D~DGvl~~g---~-~~~p~a~~~l~~l~~~-g~~~~~vTNn~~~~~~~~~~~l 66 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRG---K-KPIAGASDALKLLNRN-KIPYILLTNGGGFSERARTEFI 66 (352)
T ss_dssp -CCEEEEECCBTTTEET---T-EECTTHHHHHHHHHHT-TCCEEEECSCCSSCHHHHHHHH
T ss_pred ccCCEEEEECCCeeEcC---C-eeCcCHHHHHHHHHHC-CCEEEEEeCCCCCCchHHHHHH
Confidence 36899999999999973 2 3446788899999985 9999999965 455544444
No 123
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=93.92 E-value=0.046 Score=55.89 Aligned_cols=37 Identities=14% Similarity=0.070 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|.+. |++++|+||+....+...+..+
T Consensus 145 ~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 181 (280)
T 3skx_A 145 IRPESREAISKLKAI-GIKCMMLTGDNRFVAKWVAEEL 181 (280)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 346688899999985 8999999999999988877654
No 124
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=93.78 E-value=0.03 Score=54.78 Aligned_cols=37 Identities=14% Similarity=0.044 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+|+.....+..++..+
T Consensus 76 ~~~~~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 112 (217)
T 3m1y_A 76 LFEGALELVSALKEK-NYKVVCFSGGFDLATNHYRDLL 112 (217)
T ss_dssp BCBTHHHHHHHHHTT-TEEEEEEEEEEHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHHc
Confidence 345688999999985 8999999999988887777653
No 125
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=93.56 E-value=0.024 Score=56.24 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |.+++|+|+.+...+..++..+
T Consensus 98 ~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 132 (232)
T 1zrn_A 98 SEVPDSLRELKRR-GLKLAILSNGSPQSIDAVVSHA 132 (232)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhc
Confidence 4567788888884 8999999999998888877654
No 126
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=93.32 E-value=0.022 Score=57.57 Aligned_cols=51 Identities=12% Similarity=-0.037 Sum_probs=34.3
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEE--EE-------------EcCCChhhHHHH
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV--FI-------------VSGRGRSSLSEW 645 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V--~I-------------vSGR~~~~L~~~ 645 (780)
.|+|+||+||||++ ......+.+.++++.+.+. |..+ .+ .+||+...+.+.
T Consensus 13 ~k~iifDlDGTL~d---~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (251)
T 2pke_A 13 IQLVGFDGDDTLWK---SEDYYRTAEADFEAILSGY-LDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLS 78 (251)
T ss_dssp CCEEEECCBTTTBC---CHHHHHHHHHHHHHHHTTT-CCC-----CTTHHHHHHHHHHHHCSSHHHHHHH
T ss_pred eeEEEEeCCCCCcc---CcHhHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHhhhhhhccCcchHHHHH
Confidence 57999999999998 3334456677788877774 7766 23 468876654443
No 127
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=93.18 E-value=0.038 Score=54.71 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=38.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHH-HHHHHHhccCCCCEEEEEcCCChhhH
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEV-ISVLKTLCSDPNNTVFIVSGRGRSSL 642 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~-~~~L~~L~~d~g~~V~IvSGR~~~~L 642 (780)
+.|+|+||+||||++ ......+.+ .++++++... ...+...+|++....
T Consensus 24 ~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~~g~~-~~~~~~~~g~~~~~~ 73 (231)
T 3kzx_A 24 QPTAVIFDWYNTLID---TSINIDRTTFYQVLDQMGYK-NIDLDSIPNSTIPKY 73 (231)
T ss_dssp CCSEEEECTBTTTEE---TTSSCCHHHHHHHHHHTTCC-CCCCTTSCTTTHHHH
T ss_pred CCCEEEECCCCCCcC---CchhHHHHHHHHHHHHcCCC-HHHHHHHhCccHHHH
Confidence 468999999999998 556678888 8999988764 566667778775543
No 128
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=93.12 E-value=0.075 Score=51.31 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |.+++|+|+.....+...+..+
T Consensus 87 ~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 121 (216)
T 2pib_A 87 PGVREALEFVKSK-RIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHC-CCCEEEEeCCcHHhHHHHHHhc
Confidence 4566788888884 8999999999999888887654
No 129
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=93.01 E-value=0.053 Score=53.60 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=28.4
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. |.+++|+|+.+...+...+..+
T Consensus 102 ~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 136 (233)
T 3umb_A 102 PENVPVLRQLREM-GLPLGILSNGNPQMLEIAVKSA 136 (233)
T ss_dssp TTHHHHHHHHHTT-TCCEEEEESSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhC-CCcEEEEeCCCHHHHHHHHHHC
Confidence 4566778888884 8999999999998888877654
No 130
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=92.81 E-value=0.029 Score=54.47 Aligned_cols=30 Identities=27% Similarity=0.483 Sum_probs=21.4
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
.+.+.++|+.|++. |.+++|+|+.+...+.
T Consensus 93 ~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~ 122 (206)
T 2b0c_A 93 RPEVIAIMHKLREQ-GHRVVVLSNTNRLHTT 122 (206)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEECCCCCTTS
T ss_pred CccHHHHHHHHHHC-CCeEEEEECCChHHHH
Confidence 45677778888774 7888888887665543
No 131
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=92.75 E-value=0.047 Score=54.07 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=30.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|++. |.+++|+||.....++.++..+
T Consensus 88 ~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 123 (225)
T 1nnl_A 88 TPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKL 123 (225)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHc
Confidence 35677889999885 9999999999999888888754
No 132
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=92.72 E-value=0.074 Score=53.76 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=25.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|+ |.+++|+|+.+...+...+..+
T Consensus 96 ~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~~ 128 (253)
T 1qq5_A 96 PDAAQCLAELA---PLKRAILSNGAPDMLQALVANA 128 (253)
T ss_dssp TTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHHT
T ss_pred ccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHHC
Confidence 45667777776 7899999999998888777654
No 133
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=92.65 E-value=0.098 Score=53.03 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=26.2
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.++|+.|.+. |.+++|+|+.+...+...+..
T Consensus 114 ~~~~~~l~~l~~~-g~~~~i~tn~~~~~~~~~l~~ 147 (277)
T 3iru_A 114 PGWKEVFDKLIAQ-GIKVGGNTGYGPGMMAPALIA 147 (277)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHc-CCeEEEEeCCchHHHHHHHHh
Confidence 3455678888884 899999999998877776653
No 134
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=92.19 E-value=0.72 Score=50.34 Aligned_cols=137 Identities=11% Similarity=0.030 Sum_probs=80.9
Q ss_pred CCeEEEEeccc-cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
...++++.|++ +..|.+...++|++++ + .+ ++.+..+. ..+ . ..+ . ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~---~~~----------~-~~~----~----~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA---DLV----------L-PDD----G----AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT---TCC----------C-SSC----G----GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC---ccc----------c-cCC----C----CC
Confidence 35788999999 6777777778887653 2 22 33232111 000 0 000 0 12
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|. +.+.+++.+ ++..||++|.. -|. .+..|++++|. |+|+--+.+ -+..
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~ 339 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHH---GGA-GTTHVAARAGA-------------------PQILLPQMADQPYYAGR 339 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEEC---CCH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHHH
T ss_pred EE-EeCcCChHH---HHhhCCEEEeC---CCh-hHHHHHHHcCC-------------------CEEECCCCCccHHHHHH
Confidence 54 456788765 46999999964 454 67899999974 556544433 2222
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
+ ..|+.+++. +.++++++|.++ +.+ +.++++++..+.+..
T Consensus 340 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 340 VAELGVGVAHDGPIPTFDSLSAALATA-LTP--ETHARATAVAGTIRT 384 (415)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHH-TSH--HHHHHHHHHHHHSCS
T ss_pred HHHCCCcccCCcCCCCHHHHHHHHHHH-cCH--HHHHHHHHHHHHHhh
Confidence 3 237778764 789999999999 653 344455554444433
No 135
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=92.18 E-value=0.01 Score=58.82 Aligned_cols=53 Identities=11% Similarity=-0.024 Sum_probs=39.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
.|+|+||+||||++ .....++....+++.+... +..+..+|||....+...+.
T Consensus 2 ik~i~fDlDGTL~~---~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 54 (230)
T 3vay_A 2 IKLVTFDLDDTLWD---TAPAIVGAEAALRDWLAEQ-APKLGPVPVEHLWEIRSRLL 54 (230)
T ss_dssp CCEEEECCBTTTBC---SHHHHHHHHHHHHHHHHHH-CTTTCSCCHHHHHHHHHHHH
T ss_pred eeEEEecCcccCcC---CchHHHHHHHHHHHHHHHh-cCcchhhHHHHHHHHHHHHH
Confidence 57999999999998 3333455666777777774 66677788888887776553
No 136
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=91.97 E-value=0.037 Score=53.79 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=25.0
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+ |+.|++ . .+++|+|+.+...+...+..+
T Consensus 77 ~~~~~-l~~l~~-~-~~~~i~t~~~~~~~~~~l~~~ 109 (201)
T 2w43_A 77 EDTKY-LKEISE-I-AEVYALSNGSINEVKQHLERN 109 (201)
T ss_dssp GGGGG-HHHHHH-H-SEEEEEESSCHHHHHHHHHHT
T ss_pred CChHH-HHHHHh-C-CeEEEEeCcCHHHHHHHHHHC
Confidence 34455 777776 4 899999999988888877654
No 137
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=91.59 E-value=0.14 Score=50.21 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=29.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|++. |.+++|+|+.+...+...+..+
T Consensus 86 ~pg~~~~l~~L~~~-g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 86 NPGVREALEFVKSK-RIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHc-CCCcccccCCcHHHHHHHHHhc
Confidence 34567888999884 9999999999998887776654
No 138
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=91.47 E-value=0.93 Score=49.45 Aligned_cols=101 Identities=13% Similarity=0.032 Sum_probs=64.0
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|.+. +.+++. .+|+.||++|.. -|. .+..|++++|. |+|+.-+.+ .+..
T Consensus 307 v~~~-~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 307 VEVH-QWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV-------------------PMVAVPQIAEQTMNAER 359 (424)
T ss_dssp EEEE-SSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHH
T ss_pred eEEe-cCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC-------------------CEEEecCccchHHHHHH
Confidence 5544 567765 689999988753 343 67899999974 566654432 1222
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
+ ..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+...+...-+...+
T Consensus 360 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (424)
T 2iya_A 360 IVELGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGARAAADIL 416 (424)
T ss_dssp HHHTTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHCCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 2 236777765 8899999999999865 34555666555555444333333333
No 139
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=91.14 E-value=0.017 Score=56.61 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=31.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC--CCCEEEEEcCCChhh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD--PNNTVFIVSGRGRSS 641 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d--~g~~V~IvSGR~~~~ 641 (780)
.|+|+||+||||++ .....++.+.++++++... .+..+...+||+...
T Consensus 2 ~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 51 (221)
T 2wf7_A 2 FKAVLFDLDGVITD---TAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRED 51 (221)
T ss_dssp CCEEEECCBTTTBT---HHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHH
T ss_pred CcEEEECCCCcccC---ChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHH
Confidence 47999999999998 4444556677778776432 012233457777554
No 140
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=90.52 E-value=0.12 Score=57.02 Aligned_cols=37 Identities=22% Similarity=0.108 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+||.....++..+..+
T Consensus 257 ~~pg~~e~l~~Lk~~-G~~~~ivS~~~~~~~~~~~~~l 293 (415)
T 3p96_A 257 LMPGARTTLRTLRRL-GYACGVVSGGFRRIIEPLAEEL 293 (415)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHc
Confidence 345678899999985 9999999999998888877765
No 141
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=90.42 E-value=0.03 Score=54.68 Aligned_cols=25 Identities=0% Similarity=-0.295 Sum_probs=21.0
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+.+..|+.+++.+++++|+++.+|.
T Consensus 142 ~~~k~~~~~~~~~~~~~~~~~~~~i 166 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLKACPEEVL 166 (225)
T ss_dssp SSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCChHHHHHHHHHhCCChHHeE
Confidence 4566778999999999999998764
No 142
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=90.32 E-value=0.32 Score=48.12 Aligned_cols=33 Identities=12% Similarity=0.035 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
+.+.+.++|+.|++ . .+++|+|+.+...+....
T Consensus 113 ~~~~~~~~l~~l~~-~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 113 IPTYKLDLLLKLRE-K-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCHHHHHHHHHHTT-T-SEEEEEECCCHHHHHHHH
T ss_pred ccHHHHHHHHHHHh-c-CcEEEEECCChHHHHHHH
Confidence 34778889999987 3 899999999988876433
No 143
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=90.24 E-value=0.18 Score=52.42 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=55.3
Q ss_pred HHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 579 ~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.....|.....++|++|+|+++...-.....+.+.+.++|+.|++. |++++|+||++...+...+..+
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 200 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 200 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHh
Confidence 345566777777899999999998753212345678899999999985 9999999999999888887654
No 144
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=90.18 E-value=1.3 Score=52.37 Aligned_cols=175 Identities=11% Similarity=0.116 Sum_probs=106.1
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
|..++.+..++ .|=-+..+..+.++|++.|+-+ |++...+. ... ..+.+.+++ +|-. -..|
T Consensus 522 ~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~gi~-~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----MGLP-QNRI 582 (723)
T ss_dssp TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----TTCC-GGGE
T ss_pred CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----cCCC-cCeE
Confidence 33444445555 4556889999999999999865 76665432 111 223333332 2432 2347
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC----CCC-cccc
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE----FIG-CSPS 487 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se----~~G-~~~~ 487 (780)
+|.. ..+.++..+.|+.+||++-|--+-| +.+..||+.+|. .|+|- |+| ++.+
T Consensus 583 ~f~~-~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~Gv--------------------Pvvt~~g~~~~sR~~~s 640 (723)
T 4gyw_A 583 IFSP-VAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGT--------------------PMVTMPGETLASRVAAS 640 (723)
T ss_dssp EEEE-CCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC--------------------CEEBCCCSSGGGTHHHH
T ss_pred EECC-CCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcCC--------------------CEEEccCCCccHhHHHH
Confidence 7654 6789999999999999999998877 788999999963 33332 111 1111
Q ss_pred C-C--C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh---CCHHHHHHHHHHHHHHHHHhh
Q 003999 488 L-S--G--AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST---HDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 488 l-~--~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~---~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
+ . | -+++ +|.++-.+.-.++-++++ .+..-.+++++...+ +|...|++.|-..+..+++..
T Consensus 641 ~l~~~gl~e~ia--~~~~~Y~~~a~~la~d~~-~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 641 QLTCLGCLELIA--KNRQEYEDIAVKLGTDLE-YLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHTCGGGBC--SSHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCccccc--CCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 1 1 1 1222 355554444444444443 233333444544433 699999999988888887764
No 145
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=89.47 E-value=0.17 Score=51.25 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=23.8
Q ss_pred EeCCCCHHHHHHHHHHHcCCCC-Cccc-cCC
Q 003999 752 KPQVLRPSSISVSLSLSVCVRA-RACK-LDD 780 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~-~~~~-~~~ 780 (780)
.+.+.+|+.+++.+++++|+++ .+|. .||
T Consensus 156 ~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD 186 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHTCCSGGGEEEEES
T ss_pred cCCCCCCHHHHHHHHHHhCCCCCcCEEEEeC
Confidence 4678899999999999999998 7764 344
No 146
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=89.17 E-value=0.18 Score=50.58 Aligned_cols=36 Identities=8% Similarity=0.044 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|++. |.+++|+|+.+...++.++..+
T Consensus 79 ~pg~~~~l~~L~~~-g~~~~ivS~~~~~~~~~~l~~l 114 (236)
T 2fea_A 79 REGFREFVAFINEH-EIPFYVISGGMDFFVYPLLEGI 114 (236)
T ss_dssp CTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHTTT
T ss_pred CccHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHhcC
Confidence 35677889999884 8999999999998888887643
No 147
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.09 E-value=0.093 Score=51.36 Aligned_cols=33 Identities=15% Similarity=-0.106 Sum_probs=25.5
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD 626 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d 626 (780)
.|+|+||+||||++ .....++.+.++++.|.+.
T Consensus 8 ik~i~fDlDGTL~~---~~~~~~~~~~~~~~~l~~~ 40 (234)
T 3ddh_A 8 IKVIAFDADDTLWS---NEPFFQEVEKQYTDLLKPY 40 (234)
T ss_dssp CCEEEECCBTTTBC---CHHHHHHHHHHHHHHTGGG
T ss_pred ccEEEEeCCCCCcc---CcchHHHHHHHHHHHHHhc
Confidence 68999999999998 3334556677788888874
No 148
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=89.01 E-value=0.19 Score=48.06 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=29.5
Q ss_pred CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 611 SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 611 ~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.++|+.|++. |.+++|+|+.....+... ..+
T Consensus 79 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~-~~~ 115 (201)
T 4ap9_A 79 NVSPEARELVETLREK-GFKVVLISGSFEEVLEPF-KEL 115 (201)
T ss_dssp CCCHHHHHHHHHHHHT-TCEEEEEEEEETTTSGGG-TTT
T ss_pred CCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHH-HHc
Confidence 3457788999999985 899999999888777666 544
No 149
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=88.80 E-value=1.3 Score=48.35 Aligned_cols=137 Identities=11% Similarity=-0.002 Sum_probs=80.9
Q ss_pred CCeEEEEecccc---ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 333 GKKLILGIDDMD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 333 ~~~vil~Vdrld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
...|+++.|++. ..|.+...++|++.+ +.+ ++.+..+. . .+ . ....
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~~--~-~~----------~-----~~~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR----VILSRGWT--E-LV----------L-----PDDR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC----EEEECTTT--T-CC----------C-----SCCC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe----EEEEeCCc--c-cc----------c-----cCCC----
Confidence 356888899984 566666677776653 233 33332211 0 00 0 0111
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CS 485 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 485 (780)
..|. +.+.+++.+ +|..||++|. +-|.| +..|+++||. |+|+--+.+ .+
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na 338 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGV-------------------PQLVIPRNTDQPYFA 338 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTC-------------------CEEECCCSBTHHHHH
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCC-------------------CEEEccCCCCcHHHH
Confidence 1254 345777654 5799999996 45654 8999999974 455533322 22
Q ss_pred ccC---CCcEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 486 PSL---SGAIRVNP--WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 486 ~~l---~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
..+ ..|+.+++ .+.++++++|.++ +.+ +.+.++++..+.+..
T Consensus 339 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 339 GRVAALGIGVAHDGPTPTFESLSAALTTV-LAP--ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSH--HHHHHHHHHTTTCCC
T ss_pred HHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCH--HHHHHHHHHHHHHhh
Confidence 233 23677765 5789999999999 653 455556665555443
No 150
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=88.34 E-value=0.09 Score=50.13 Aligned_cols=27 Identities=7% Similarity=-0.068 Sum_probs=21.6
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCccccCC
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKLDD 780 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~~~ 780 (780)
+.+..|+.+++.+++.+|++ +.+..||
T Consensus 134 ~~~kp~~~~~~~~~~~~~~~-~~~~iGD 160 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQIS-SGLVIGD 160 (190)
T ss_dssp CCCTTSCHHHHHHHHHTTCS-SEEEEES
T ss_pred CCCCCCHHHHHHHHHHcCCC-eEEEEcC
Confidence 45667899999999999999 5555665
No 151
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=88.18 E-value=6.1 Score=42.78 Aligned_cols=138 Identities=11% Similarity=0.059 Sum_probs=81.3
Q ss_pred CCCeEEEEecccc-ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 ~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
..+.|+++.|++. ..+.+...++|++++ +++ +|.++.+.... . . +. ..
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~-----------~----~~--~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R-----------I----DE--GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C-----------S----SC--CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c-----------c----cC--CC
Confidence 3467888899998 566666666666553 233 33333221000 0 0 00 11
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----c
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----P 486 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~ 486 (780)
.|.+. +.+++.+ ++..||++|-.+ |. .+..|++++|. |+|+--+.|-- .
T Consensus 269 ~v~~~-~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~Gv-------------------P~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 269 DCLVV-GEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGA-------------------PQVVVPQKADQPYYAG 321 (404)
T ss_dssp TEEEE-SSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHH
T ss_pred CEEEe-cCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCC-------------------CEEEcCCcccHHHHHH
Confidence 35544 5777654 567899998544 43 46689999975 45554443321 1
Q ss_pred cC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 487 SL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 487 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.+ +.|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 322 ~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 322 RVADLGVGVAHDGPTPTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 12 236777653 78999999999998 4 455566666555544
No 152
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=88.15 E-value=0.049 Score=53.80 Aligned_cols=25 Identities=8% Similarity=-0.138 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+-.|+.+++.+++.+|+++.+|.+
T Consensus 153 ~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (234)
T 3u26_A 153 FFKPHPRIFELALKKAGVKGEEAVY 177 (234)
T ss_dssp BCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCcCHHHHHHHHHHcCCCchhEEE
Confidence 3456788899999999999988753
No 153
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=88.05 E-value=0.11 Score=51.40 Aligned_cols=27 Identities=4% Similarity=0.160 Sum_probs=23.2
Q ss_pred EeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 752 KPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+.+..|+.+++.+++++|+++.+|.+
T Consensus 156 ~~~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 456788999999999999999988753
No 154
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=87.76 E-value=0.027 Score=58.08 Aligned_cols=26 Identities=4% Similarity=-0.198 Sum_probs=22.1
Q ss_pred eCCCCHHHHHHHHHHHcCC-------CCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCV-------RARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i-------~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+ ++.+|.+
T Consensus 167 ~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~ 199 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVV 199 (275)
T ss_dssp SSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEE
T ss_pred CCCCCChHHHHHHHHHcCCCccccCCCcceEEE
Confidence 5677899999999999999 8887753
No 155
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=87.52 E-value=0.099 Score=49.98 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=22.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L 623 (780)
.|+|+||+||||++ .....++.+.++++++
T Consensus 4 ~k~i~fDlDGTL~~---~~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 4 KTAFIWDLDGTLLD---SYEAILSGIEETFAQF 33 (207)
T ss_dssp CCEEEECTBTTTEE---CHHHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCcccc---cHHHHHHHHHHHHHHc
Confidence 57999999999998 3333445666777765
No 156
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=87.21 E-value=0.13 Score=50.19 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=29.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCC--CEEEEEcCCChhh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPN--NTVFIVSGRGRSS 641 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g--~~V~IvSGR~~~~ 641 (780)
.|+|+||+||||++ ......+.+.++++++-.... ..+...+|++...
T Consensus 9 ~k~i~fDlDGTL~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 58 (226)
T 1te2_A 9 ILAAIFDMDGLLID---SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDM 58 (226)
T ss_dssp CCEEEECCBTTTBC---CHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHH
T ss_pred CCEEEECCCCCcCc---CHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHH
Confidence 68999999999998 333344566677776633210 1233457777554
No 157
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=87.04 E-value=0.14 Score=50.23 Aligned_cols=26 Identities=8% Similarity=-0.101 Sum_probs=23.0
Q ss_pred eCC--CCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQV--LRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~g--vsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+ .+|+.+++.+++++|+++.+|.+
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~~~~~~~i~ 165 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFGVSPDRVVV 165 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred ccCCCCcCHHHHHHHHHHcCCChhHeEE
Confidence 677 89999999999999999988753
No 158
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=86.89 E-value=0.12 Score=50.87 Aligned_cols=23 Identities=9% Similarity=-0.084 Sum_probs=19.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCccc
Q 003999 755 VLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 755 gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+-.|+.+++.+++++|+++++|.
T Consensus 157 ~kp~~~~~~~~~~~lgi~~~~~~ 179 (235)
T 2om6_A 157 YKPRKEMFEKVLNSFEVKPEESL 179 (235)
T ss_dssp CTTCHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCHHHHHHHHHHcCCCccceE
Confidence 34578999999999999998875
No 159
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=86.58 E-value=0.39 Score=47.29 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=45.9
Q ss_pred hccCceEEeCCCCCCCCCCCCC--------------------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 588 KTERRAIFLDYDGTVVPETSII--------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~--------------------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
..+++.++||+||||+...... -..-+.+.+.|+.|.+. ..++|+|......++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~--~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL--FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC--CeEEEEcCCCHHHHHHHHH
Confidence 4578999999999999732110 01236788999999983 8999999999999888776
Q ss_pred cC
Q 003999 648 PC 649 (780)
Q Consensus 648 ~l 649 (780)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 160
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=86.48 E-value=0.14 Score=50.25 Aligned_cols=26 Identities=4% Similarity=-0.012 Sum_probs=23.0
Q ss_pred EeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 752 KPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+.+..|+.+++.+++.+|+++.+|.
T Consensus 138 ~~~~kp~~~~~~~~~~~lgi~~~~~i 163 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLNIKSDDAI 163 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 36688999999999999999988775
No 161
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=86.29 E-value=0.14 Score=50.62 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=17.7
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|+.+++.+++.+|+++.+|.+
T Consensus 143 ~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp ------CCHHHHHHHHHTSCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 34556677999999999999988754
No 162
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=86.24 E-value=0.14 Score=50.46 Aligned_cols=26 Identities=4% Similarity=-0.257 Sum_probs=21.7
Q ss_pred eCCCCHHHHHHHHHHHcC-CCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVC-VRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~-i~~~~~~~ 778 (780)
..+-.|+.+++.+++.+| +++.+|.+
T Consensus 155 ~~~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp TSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCChhHeEE
Confidence 346677999999999999 99988754
No 163
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=86.22 E-value=0.16 Score=50.62 Aligned_cols=26 Identities=4% Similarity=-0.207 Sum_probs=22.6
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+++.+|.+
T Consensus 163 ~~~kp~~~~~~~~~~~lg~~~~~~i~ 188 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGGLKADEAVV 188 (243)
T ss_dssp SSCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56778899999999999999988863
No 164
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=85.92 E-value=0.16 Score=48.87 Aligned_cols=24 Identities=13% Similarity=0.037 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHHcCCCCCccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+-.|+.+++.+++.+|+++++|.
T Consensus 143 ~~kp~~~~~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 143 ESKPNPEIYLTALKQLNVQASRAL 166 (214)
T ss_dssp SCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCCCChHHHHHHHHHcCCChHHeE
Confidence 455678999999999999998874
No 165
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=85.87 E-value=0.12 Score=51.71 Aligned_cols=29 Identities=3% Similarity=-0.015 Sum_probs=25.1
Q ss_pred EEEeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 750 EVKPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
|..+.+..|+.+++.+++++|+++++|.+
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~~ 195 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLDLPPQEVML 195 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred cccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence 45578899999999999999999988754
No 166
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=85.83 E-value=0.15 Score=50.68 Aligned_cols=27 Identities=4% Similarity=-0.029 Sum_probs=22.6
Q ss_pred EeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 752 KPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+.+-.|+.+++.+++++|+++.+|.+
T Consensus 165 ~~~~kp~~~~~~~~~~~lgi~~~~~~~ 191 (254)
T 3umg_A 165 NRKYKPDPQAYLRTAQVLGLHPGEVML 191 (254)
T ss_dssp HTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 345677899999999999999988754
No 167
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=85.20 E-value=0.17 Score=49.84 Aligned_cols=26 Identities=8% Similarity=-0.141 Sum_probs=22.2
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++++|+++++|.+
T Consensus 159 ~~~kp~~~~~~~~~~~lgi~~~~~~~ 184 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQSELRESLM 184 (240)
T ss_dssp TCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 45677899999999999999988753
No 168
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=85.18 E-value=0.83 Score=47.50 Aligned_cols=49 Identities=24% Similarity=0.341 Sum_probs=38.4
Q ss_pred CceEEeCCCCCCCCCCCCC---------CCCCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 591 RRAIFLDYDGTVVPETSII---------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~---------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
.+.+++|.|||+....... ..+-+.+.++|+.|++. |++++|+|||+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRESG 216 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSCCC
T ss_pred cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 4678899999987633111 23468999999999985 9999999999854
No 169
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=85.04 E-value=0.53 Score=45.68 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=45.4
Q ss_pred hccCceEEeCCCCCCCCCCCCC--------------------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 588 KTERRAIFLDYDGTVVPETSII--------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~--------------------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
..+++.+++|+||||+...... -.+-+.+.+.|++|.+. ..++|+|......++..+.
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~--~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL--FECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC--CCEEEEcCCCHHHHHHHHH
Confidence 3567899999999998632110 01246788999999883 8999999999998888776
Q ss_pred cC
Q 003999 648 PC 649 (780)
Q Consensus 648 ~l 649 (780)
.+
T Consensus 90 ~l 91 (181)
T 2ght_A 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 170
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=84.93 E-value=0.19 Score=49.91 Aligned_cols=26 Identities=0% Similarity=-0.253 Sum_probs=22.7
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+++.+|.+
T Consensus 162 ~~~kp~~~~~~~~~~~lg~~~~~~i~ 187 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGGFKPNEALV 187 (247)
T ss_dssp SSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHcCCChhheEE
Confidence 56778899999999999999988853
No 171
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=84.25 E-value=0.18 Score=50.47 Aligned_cols=25 Identities=8% Similarity=0.049 Sum_probs=20.3
Q ss_pred eCCCCHHHHHHHHHHHcCCCC--Cccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRA--RACK 777 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~--~~~~ 777 (780)
..+-.|..+++.+++.+|+++ ++|.
T Consensus 168 ~~~Kp~~~~~~~~~~~lgi~~~~~~~i 194 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFSPPPAMEKCL 194 (250)
T ss_dssp CSCTTSTHHHHHHHHTSSSCCCGGGEE
T ss_pred cCCCCChHHHHHHHHHcCCCCCcceEE
Confidence 455667889999999999987 7664
No 172
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=84.02 E-value=0.18 Score=50.89 Aligned_cols=24 Identities=4% Similarity=0.033 Sum_probs=20.7
Q ss_pred CCCCHHHHHHHHHHHcCCCCCccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+..|+.+++.+++.+|+++++|.
T Consensus 166 ~~Kp~~~~~~~~~~~lgi~~~~~i 189 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLGILPERCV 189 (259)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCChHHHHHHHHHcCCCHHHEE
Confidence 566679999999999999998875
No 173
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=83.80 E-value=0.47 Score=56.36 Aligned_cols=68 Identities=10% Similarity=0.160 Sum_probs=55.7
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+.|.....+.+++.+||+++..-....++.+++.++|++|++. |++|+++|||...........+
T Consensus 524 ~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~-Gi~v~mlTGd~~~~a~~ia~~l 591 (736)
T 3rfu_A 524 EKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQS-GIEIVMLTGDSKRTAEAVAGTL 591 (736)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3455667778899999999998764334456788999999999995 9999999999999998887665
No 174
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=83.78 E-value=0.82 Score=50.84 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=24.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCC------ChhhHHHH
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGR------GRSSLSEW 645 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR------~~~~L~~~ 645 (780)
.+.+.++|+.|++. |.+++|+|+. ....+...
T Consensus 102 ~~~~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 102 NRPMLQAALMLRKK-GFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEECCCCCCSTTHHHHHHH
T ss_pred ChhHHHHHHHHHHC-CCEEEEEeCCCccccchhhHHHHH
Confidence 35677889999985 9999999997 55555543
No 175
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=83.71 E-value=0.2 Score=49.10 Aligned_cols=26 Identities=4% Similarity=0.051 Sum_probs=22.3
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+++.+|.+
T Consensus 144 ~~~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp SCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHhCCCHHHEEE
Confidence 55778899999999999999987753
No 176
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=83.61 E-value=0.59 Score=44.81 Aligned_cols=22 Identities=9% Similarity=-0.082 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHcCCCCCcccc
Q 003999 757 RPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+...++.+++.+|+++++|.+
T Consensus 142 p~~~~~~~~~~~~~~~~~~~~~ 163 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQVRPEEAVM 163 (200)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCHHHHHHHHHHcCCCHHHeEE
Confidence 4467889999999999988753
No 177
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=83.42 E-value=0.5 Score=50.44 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=30.7
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
-++++++++.|+++ |..|+||||-....++.+...
T Consensus 145 ~~~~~~l~~~l~~~-G~~v~ivSas~~~~v~~~a~~ 179 (327)
T 4as2_A 145 FSGQRELYNKLMEN-GIEVYVISAAHEELVRMVAAD 179 (327)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhh
Confidence 35688899999995 999999999999999998865
No 178
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=83.11 E-value=0.79 Score=49.30 Aligned_cols=88 Identities=8% Similarity=-0.063 Sum_probs=54.3
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----ccccC--
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL-- 488 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (780)
+.+.+|+.+ ++..||+||. +-|+| +..|+++||. |+|+--+.+ .+..+
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~Gv-------------------P~v~~P~~~dQ~~na~~v~~ 345 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAGV-------------------PQCVIPHGSYQDTNRDVLTG 345 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHTC-------------------CEEECCC---CHHHHHHHHH
T ss_pred EEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhCC-------------------CEEEecCcccHHHHHHHHHH
Confidence 445777654 5688999774 45666 6689999974 555533322 22223
Q ss_pred -CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCC
Q 003999 489 -SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (780)
Q Consensus 489 -~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~ 532 (780)
.-|+.+++. +.++++|.++|+++ +.++|.+++.+.+...+
T Consensus 346 ~G~g~~l~~~--~~~~~al~~lL~d~--~~r~~a~~l~~~~~~~~ 386 (400)
T 4amg_A 346 LGIGFDAEAG--SLGAEQCRRLLDDA--GLREAALRVRQEMSEMP 386 (400)
T ss_dssp HTSEEECCTT--TCSHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CCCEEEcCCC--CchHHHHHHHHcCH--HHHHHHHHHHHHHHcCC
Confidence 226666654 45789999999875 34555666666665543
No 179
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=82.77 E-value=0.21 Score=48.99 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=19.8
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKT 622 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~ 622 (780)
+.|+|+||+||||++ ......+.+.+++++
T Consensus 5 ~~k~i~fD~DGTL~d---~~~~~~~~~~~~~~~ 34 (240)
T 3smv_A 5 DFKALTFDCYGTLID---WETGIVNALQPLAKR 34 (240)
T ss_dssp GCSEEEECCBTTTBC---HHHHHHHHTHHHHHH
T ss_pred cceEEEEeCCCcCcC---CchhHHHHHHHHHHH
Confidence 468999999999998 222233444455544
No 180
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=82.36 E-value=0.22 Score=48.25 Aligned_cols=23 Identities=13% Similarity=-0.064 Sum_probs=20.8
Q ss_pred CCCH--HHHHHHHHHHcCCCCCccc
Q 003999 755 VLRP--SSISVSLSLSVCVRARACK 777 (780)
Q Consensus 755 gvsK--G~al~~Ll~~l~i~~~~~~ 777 (780)
+.+| +.+++.+++.+|+++++|.
T Consensus 135 ~~~KP~~~~~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVNVAPQNAL 159 (209)
T ss_dssp SCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCcHHHHHHHHHcCCCcccEE
Confidence 6789 9999999999999998874
No 181
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=82.08 E-value=0.26 Score=48.26 Aligned_cols=26 Identities=4% Similarity=0.045 Sum_probs=22.8
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|..+...+++++|+++.+|.+
T Consensus 134 ~~~Kp~p~~~~~~~~~lg~~p~~~~~ 159 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCcccEEE
Confidence 56778999999999999999988853
No 182
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=81.75 E-value=0.27 Score=48.99 Aligned_cols=26 Identities=8% Similarity=-0.084 Sum_probs=20.9
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|..+++.+++.+|+++.+|.+
T Consensus 147 ~~~Kp~~~~~~~~~~~~g~~~~~~i~ 172 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAFNVKPEEALM 172 (241)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 34556779999999999999988753
No 183
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=80.85 E-value=0.98 Score=52.80 Aligned_cols=68 Identities=10% Similarity=0.094 Sum_probs=55.4
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+.+.....+.+++.+||+++..-....++.+++.++|++|++. |++++++||+...........+
T Consensus 427 ~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~l 494 (645)
T 3j08_A 427 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 494 (645)
T ss_dssp HHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 3445566677899999999998764334556888999999999995 9999999999999998887765
No 184
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=80.07 E-value=0.32 Score=48.23 Aligned_cols=27 Identities=4% Similarity=-0.073 Sum_probs=22.9
Q ss_pred EEeCCCCHHHHHHHHHHHcCCC-CCccc
Q 003999 751 VKPQVLRPSSISVSLSLSVCVR-ARACK 777 (780)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~i~-~~~~~ 777 (780)
..+.+..|+.+++.+++.+|++ +++|.
T Consensus 161 ~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 161 LDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp TTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 3456788999999999999999 87775
No 185
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=78.82 E-value=0.36 Score=48.21 Aligned_cols=26 Identities=8% Similarity=0.047 Sum_probs=22.8
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.++..+++++|+++.+|.+
T Consensus 162 ~~~Kp~p~~~~~~~~~l~~~~~~~~~ 187 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLGVPRDKCVY 187 (240)
T ss_dssp SCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 56778999999999999999988864
No 186
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=78.46 E-value=0.84 Score=44.24 Aligned_cols=30 Identities=10% Similarity=0.184 Sum_probs=20.6
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhcc
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCS 625 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~ 625 (780)
.+.++|+||+||||++. .+...+++++..+
T Consensus 2 ~~~k~viFDlDGTL~Ds-------~~~~~~~~~~~~~ 31 (197)
T 1q92_A 2 GRALRVLVDMDGVLADF-------EGGFLRKFRARFP 31 (197)
T ss_dssp CCCEEEEECSBTTTBCH-------HHHHHHHHHHHCT
T ss_pred CCceEEEEeCCCCCccC-------cHHHHHHHHHHHh
Confidence 35679999999999982 2334555555554
No 187
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=78.15 E-value=0.42 Score=47.93 Aligned_cols=21 Identities=5% Similarity=-0.178 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHcCCCCCccc
Q 003999 757 RPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~ 777 (780)
.|+.+++.+++.+|+++.+|.
T Consensus 171 p~~~~~~~~~~~~~~~~~~~~ 191 (243)
T 2hsz_A 171 PHPAPFYYLCGKFGLYPKQIL 191 (243)
T ss_dssp TSSHHHHHHHHHHTCCGGGEE
T ss_pred cCHHHHHHHHHHhCcChhhEE
Confidence 367899999999999998874
No 188
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=77.96 E-value=0.68 Score=46.98 Aligned_cols=25 Identities=4% Similarity=-0.241 Sum_probs=20.2
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+-.|..+++.+++.+|+++.+|.+
T Consensus 159 ~~Kp~~~~~~~~~~~~g~~~~~~~~ 183 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLAHMEPVVAAH 183 (263)
T ss_dssp SCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 3455678899999999999988764
No 189
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=77.76 E-value=1.4 Score=52.14 Aligned_cols=69 Identities=10% Similarity=0.106 Sum_probs=56.1
Q ss_pred HHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 580 DHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 580 ~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
....+.+.....+.+++.+||+++..-....++.+++.+++++|++. |++++++||+...........+
T Consensus 504 ~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~-Gi~v~~~TGd~~~~a~~ia~~l 572 (723)
T 3j09_A 504 ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 572 (723)
T ss_dssp HHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHc
Confidence 34445566677899999999998864334567888999999999995 9999999999999998877765
No 190
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=77.73 E-value=0.46 Score=47.16 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=13.6
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
..++|+||+||||++
T Consensus 10 ~~k~viFDlDGTL~d 24 (231)
T 2p11_A 10 HDIVFLFDCDNTLLD 24 (231)
T ss_dssp CSEEEEECCBTTTBC
T ss_pred CCeEEEEcCCCCCEe
Confidence 467999999999998
No 191
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=77.58 E-value=1.2 Score=46.24 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++++.|.+. |+.|+|+||--...++.....+
T Consensus 142 l~~g~~e~i~~l~~~-gi~v~ivSgg~~~~i~~i~~~~ 178 (297)
T 4fe3_A 142 LKEGYENFFGKLQQH-GIPVFIFSAGIGDVLEEVIRQA 178 (297)
T ss_dssp BCBTHHHHHHHHHHT-TCCEEEEEEEEHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHHHc
Confidence 345677888888885 9999999998888888877654
No 192
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=76.43 E-value=0.8 Score=44.92 Aligned_cols=14 Identities=29% Similarity=0.634 Sum_probs=12.9
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.++|+||+||||++
T Consensus 3 ~k~viFDlDGTL~d 16 (220)
T 2zg6_A 3 YKAVLVDFGNTLVG 16 (220)
T ss_dssp CCEEEECSBTTTEE
T ss_pred ceEEEEcCCCceec
Confidence 57999999999998
No 193
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=75.37 E-value=0.51 Score=46.50 Aligned_cols=23 Identities=0% Similarity=-0.215 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHHcCCCCCccc
Q 003999 755 VLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 755 gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+-.|+.+++.+++.+|+++++|.
T Consensus 138 ~Kp~~~~~~~~~~~~~~~~~~~~ 160 (222)
T 2nyv_A 138 KKPSPTPVLKTLEILGEEPEKAL 160 (222)
T ss_dssp TCCTTHHHHHHHHHHTCCGGGEE
T ss_pred CCCChHHHHHHHHHhCCCchhEE
Confidence 33789999999999999998875
No 194
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=73.69 E-value=1.2 Score=44.60 Aligned_cols=15 Identities=20% Similarity=0.567 Sum_probs=13.3
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
+.|+|+||+||||++
T Consensus 4 kiKaViFDlDGTL~D 18 (243)
T 4g9b_A 4 KLQGVIFDLDGVITD 18 (243)
T ss_dssp CCCEEEECSBTTTBC
T ss_pred cCcEEEEcCCCcccC
Confidence 358999999999997
No 195
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=73.65 E-value=0.69 Score=47.09 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHcCCCCCcccc
Q 003999 758 PSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 758 KG~al~~Ll~~l~i~~~~~~~ 778 (780)
+......+++.+|+++.+|.+
T Consensus 178 ~p~~~~~~~~~~~~~~~~~~~ 198 (260)
T 2gfh_A 178 APSIFYHCCDLLGVQPGDCVM 198 (260)
T ss_dssp CHHHHHHHHHHHTCCGGGEEE
T ss_pred CHHHHHHHHHHcCCChhhEEE
Confidence 367889999999999988854
No 196
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=73.65 E-value=0.96 Score=43.62 Aligned_cols=21 Identities=5% Similarity=0.031 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHcCCCCCccc
Q 003999 757 RPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+..+.+.+++.+|+++.+|.
T Consensus 151 p~~~~~~~~~~~~~~~~~~~~ 171 (211)
T 2i6x_A 151 PNEDIFLEMIADSGMKPEETL 171 (211)
T ss_dssp TSHHHHHHHHHHHCCCGGGEE
T ss_pred CCHHHHHHHHHHhCCChHHeE
Confidence 345688999999999998774
No 197
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=73.62 E-value=1.4 Score=44.27 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=15.8
Q ss_pred HHHHHHHHHHcCCCCCcccc
Q 003999 759 SSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 759 G~al~~Ll~~l~i~~~~~~~ 778 (780)
-......++.+|+++.+|.+
T Consensus 173 p~~~~~a~~~lg~~p~e~l~ 192 (250)
T 4gib_A 173 PEIFLMSAKGLNVNPQNCIG 192 (250)
T ss_dssp SHHHHHHHHHHTCCGGGEEE
T ss_pred HHHHHHHHHHhCCChHHeEE
Confidence 35778888999999988754
No 198
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=72.85 E-value=1.2 Score=44.22 Aligned_cols=74 Identities=12% Similarity=0.068 Sum_probs=48.8
Q ss_pred cccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCCC-----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSII-----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 572 ~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~-----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
|.|.+|=.+..-..| .++..+++|+|+||+...... -..-+.+.+.|+.|.+ ...++|.|.-....++..+
T Consensus 17 p~~~~lLp~~~~~~~--~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~~--~yeivI~Tas~~~ya~~vl 92 (204)
T 3qle_A 17 PPFPDLLPPPPPPPY--QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLSQ--YYEIVLFSSNYMMYSDKIA 92 (204)
T ss_dssp --CCCCSCCCC------CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHTT--TEEEEEECSSCHHHHHHHH
T ss_pred CCcccCCCCCCcccc--CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHHh--CCEEEEEcCCcHHHHHHHH
Confidence 444444333322334 456899999999999732111 1123678999999984 6899999999999888888
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 93 ~~L 95 (204)
T 3qle_A 93 EKL 95 (204)
T ss_dssp HHT
T ss_pred HHh
Confidence 765
No 199
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=70.66 E-value=1.3 Score=41.99 Aligned_cols=14 Identities=29% Similarity=0.470 Sum_probs=12.4
Q ss_pred CceEEeCCCCCCCC
Q 003999 591 RRAIFLDYDGTVVP 604 (780)
Q Consensus 591 ~rlI~lD~DGTL~~ 604 (780)
.++|+||+||||++
T Consensus 4 ~~~viFD~DGtL~D 17 (180)
T 3bwv_A 4 RQRIAIDMDEVLAD 17 (180)
T ss_dssp CCEEEEETBTTTBC
T ss_pred ccEEEEeCCCcccc
Confidence 36899999999987
No 200
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=69.71 E-value=1.3 Score=46.82 Aligned_cols=37 Identities=22% Similarity=0.010 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+||.....++..+..+
T Consensus 179 ~~pg~~~~l~~L~~~-g~~~~ivS~~~~~~~~~~~~~l 215 (335)
T 3n28_A 179 LMPELPELVATLHAF-GWKVAIASGGFTYFSDYLKEQL 215 (335)
T ss_dssp CCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHc
Confidence 446777889999985 9999999999888777776654
No 201
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=68.34 E-value=1.6 Score=41.98 Aligned_cols=35 Identities=11% Similarity=-0.051 Sum_probs=26.9
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-+.+.++|+.|.+. .+++|+|+.....++.++..+
T Consensus 71 ~~g~~~~l~~l~~~--~~~~i~s~~~~~~~~~~l~~~ 105 (206)
T 1rku_A 71 LEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQL 105 (206)
T ss_dssp CTTHHHHHHHHHTT--SEEEEEEEEEHHHHHHHHHHT
T ss_pred CccHHHHHHHHHhc--CcEEEEECChHHHHHHHHHHc
Confidence 35567778888773 889999999888888777654
No 202
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=68.01 E-value=3.2 Score=43.98 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=44.3
Q ss_pred ccCceEEeCCCCCCCCCCCCCCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSIIKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.++++++||+||||+........ .-|.+.+.|+.+.+ ...|+|-|.-....+...+..+
T Consensus 138 ~~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~~--~yeivIfTas~~~ya~~vld~L 200 (320)
T 3shq_A 138 EGKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYE--DYDIVIWSATSMRWIEEKMRLL 200 (320)
T ss_dssp TTCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHHH--HEEEEEECSSCHHHHHHHHHHT
T ss_pred CCCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHHh--CCEEEEEcCCcHHHHHHHHHHh
Confidence 36789999999999984321111 13567788888885 5789999999999888877654
No 203
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=66.61 E-value=3.6 Score=43.40 Aligned_cols=58 Identities=12% Similarity=0.066 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHhccCC----------CCEEEEEcCCChhhHHHHhccCCC-c------eEEecCccEEeeCCC
Q 003999 610 KSPGPEVISVLKTLCSDP----------NNTVFIVSGRGRSSLSEWLAPCEM-L------GIAAEHGYFIRWNKT 667 (780)
Q Consensus 610 ~~ps~~~~~~L~~L~~d~----------g~~V~IvSGR~~~~L~~~f~~l~~-l------gliaenG~~ir~~~~ 667 (780)
..++++.++++.+++... |+.|+++|||....+..+...+.- . ..+..||+.+.+-++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~~~~~~~~~i~~~~~viFD~Dg 116 (335)
T 3n28_A 42 HYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMDS 116 (335)
T ss_dssp SCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEEEECTTCCCTTSCCEEEECSSC
T ss_pred CCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCEEEccCcccccCCCEEEEcCCC
Confidence 346788899998888434 789999999999999888875421 1 356667777776654
No 204
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=64.24 E-value=6.8 Score=42.39 Aligned_cols=64 Identities=16% Similarity=0.200 Sum_probs=45.8
Q ss_pred HHHHhccCceEEeCCCCCCCCCC--CC-------CCCC----------------------------CHHHHHHHHHhccC
Q 003999 584 SAYRKTERRAIFLDYDGTVVPET--SI-------IKSP----------------------------GPEVISVLKTLCSD 626 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~--~~-------~~~p----------------------------s~~~~~~L~~L~~d 626 (780)
......+++.++||+||||+... +. ...| -|.+.+.|+.+.+
T Consensus 11 ~rl~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~- 89 (372)
T 3ef0_A 11 KRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISE- 89 (372)
T ss_dssp HHHHHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHT-
T ss_pred HHHHhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhc-
Confidence 34456789999999999999631 00 0000 2567899999985
Q ss_pred CCCEEEEEcCCChhhHHHHhccC
Q 003999 627 PNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 627 ~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...++|.|.-........+..+
T Consensus 90 -~yeivI~Tas~~~yA~~vl~~L 111 (372)
T 3ef0_A 90 -LYELHIYTMGTKAYAKEVAKII 111 (372)
T ss_dssp -TEEEEEECSSCHHHHHHHHHHH
T ss_pred -CcEEEEEeCCcHHHHHHHHHHh
Confidence 6899999999988777766543
No 205
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=60.03 E-value=3.1 Score=42.36 Aligned_cols=15 Identities=40% Similarity=0.702 Sum_probs=13.6
Q ss_pred cCceEEeCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVP 604 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~ 604 (780)
+.++|+||+||||++
T Consensus 30 ~ikaviFDlDGTLvD 44 (253)
T 2g80_A 30 NYSTYLLDIEGTVCP 44 (253)
T ss_dssp CCSEEEECCBTTTBC
T ss_pred CCcEEEEcCCCCccc
Confidence 368999999999998
No 206
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=58.69 E-value=7.4 Score=47.96 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 600 GTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-|++.......+|.+++.++|++|++. |++|+++|||...........+
T Consensus 593 l~~lGlv~i~Dp~r~~~~~aI~~l~~a-GI~vvmiTGd~~~tA~~ia~~l 641 (1034)
T 3ixz_A 593 LSFAGLVSMIDPPRATVPDAVLKCRTA-GIRVIMVTGDHPITAKAIAASV 641 (1034)
T ss_pred cEEEEEEeccCCCchhHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHc
Confidence 344443334557889999999999995 9999999999999998877654
No 207
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=56.87 E-value=3.8 Score=41.66 Aligned_cols=22 Identities=5% Similarity=-0.058 Sum_probs=17.2
Q ss_pred CHH--HHHHHHHHHcCCCCCcccc
Q 003999 757 RPS--SISVSLSLSVCVRARACKL 778 (780)
Q Consensus 757 sKG--~al~~Ll~~l~i~~~~~~~ 778 (780)
.|- ...+.+++.+|+++.+|.+
T Consensus 186 ~KP~p~~~~~~~~~lg~~p~~~l~ 209 (261)
T 1yns_A 186 HKVESESYRKIADSIGCSTNNILF 209 (261)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEE
T ss_pred CCCCHHHHHHHHHHhCcCcccEEE
Confidence 553 6678899999999988864
No 208
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=56.79 E-value=4.3 Score=41.79 Aligned_cols=17 Identities=24% Similarity=0.388 Sum_probs=14.5
Q ss_pred cCceEEeCCCCCCCCCC
Q 003999 590 ERRAIFLDYDGTVVPET 606 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~ 606 (780)
+.+.|+||+||||++..
T Consensus 31 ~i~~viFD~dGTL~ds~ 47 (287)
T 3a1c_A 31 KVTAVIFDKTGTLTKGK 47 (287)
T ss_dssp HCCEEEEECCCCCBCSC
T ss_pred cCCEEEEeCCCCCcCCC
Confidence 46899999999999843
No 209
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=53.23 E-value=4.5 Score=49.84 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCc
Q 003999 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659 (780)
Q Consensus 610 ~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG 659 (780)
.+|.+++.+++++|++. |++|+++||+...........+ |+..+||
T Consensus 598 Dplr~~~~~aI~~l~~a-GI~v~miTGD~~~tA~~ia~~l---gi~~~~~ 643 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSA-GIKVIMVTGDHPITAKAIAKGV---GIISEGN 643 (1028)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH---TSSCTTC
T ss_pred CCCChhHHHHHHHHHHc-CCEEEEECCCCHHHHHHHHHHc---CCCCCCc
Confidence 46778999999999995 9999999999999988877654 3444444
No 210
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=50.37 E-value=1.1e+02 Score=36.46 Aligned_cols=136 Identities=11% Similarity=0.031 Sum_probs=85.5
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHHH--hC------CC-----CCCceEEEEEEcCCCCChhHHHHHHHHHHHHH
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QH------PG-----MRGKVVLVQIVNPARGSGKDVQEAKKETYLTA 397 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~------P~-----~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv 397 (780)
++..+++.|-|+..-|=..+ .|.-++++.+ .+ |+ ++ .+++|..|-...+. ..-..+-+.|..++
T Consensus 598 p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~-P~~~IFaGKAaP~y-~~aK~iIklI~~va 675 (879)
T 1ygp_A 598 DDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYP-RKVSIFGGKSAPGY-YMAKLIIKLINCVA 675 (879)
T ss_dssp GGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSC-CEEEEEECCCCTTC-HHHHHHHHHHHHHH
T ss_pred CCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCC-CeEEEEeccCCCCc-HHHHHHHHHHHHHH
Confidence 34678889999999998777 5666665532 34 54 32 46666544333233 23345667788888
Q ss_pred HHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEE
Q 003999 398 KRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLV 477 (780)
Q Consensus 398 ~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV 477 (780)
+-||..-...+.-.|+|+. +..-.--..++.+|||-.-+|+ .++|| ||+++ |.-++ .|.|.
T Consensus 676 ~~iN~Dp~v~~~LKVVFle-nY~VslAe~iipaaDvseqist------ag~EA--SGTsn--MKfal--------NGaLt 736 (879)
T 1ygp_A 676 DIVNNDESIEHLLKVVFVA-DYNVSKAEIIIPASDLSEHIST------AGTEA--SGTSN--MKFVM--------NGGLI 736 (879)
T ss_dssp HHHTTCGGGTTSEEEEEET-TCCHHHHHHHGGGCSEEEECCC------TTCCS--CCHHH--HHHHT--------TTCEE
T ss_pred HHhccChhhCCceEEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCccc--cCchh--hHHHH--------cCCee
Confidence 8888643333444688886 4455555678999999988886 45554 44321 22222 26788
Q ss_pred EcCCCCccccC
Q 003999 478 VSEFIGCSPSL 488 (780)
Q Consensus 478 ~Se~~G~~~~l 488 (780)
+|..-|+--++
T Consensus 737 lgtlDGanvEi 747 (879)
T 1ygp_A 737 IGTVDGANVEI 747 (879)
T ss_dssp EEESCTHHHHH
T ss_pred eecccchhHHH
Confidence 88877765444
No 211
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=49.84 E-value=51 Score=34.17 Aligned_cols=108 Identities=12% Similarity=-0.009 Sum_probs=59.3
Q ss_pred HHHHHHc----CCCeEEEEecc-ccccCChH--HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHH
Q 003999 325 KEIEKQF----DGKKLILGIDD-MDIFKGIS--LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTA 397 (780)
Q Consensus 325 ~~lr~~~----~~~~vil~Vdr-ld~~KGi~--~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv 397 (780)
+++++++ +++.+++..+- ..+.|..+ ...+..+.|.++ +++ +|.++.| .+ .+ .++++.
T Consensus 168 ~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~----vvl~g~~-----~e-~~---~~~~i~ 232 (348)
T 1psw_A 168 SYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQ----VVLFGSA-----KD-HE---AGNEIL 232 (348)
T ss_dssp HHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCE----EEECCCG-----GG-HH---HHHHHH
T ss_pred HHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCe----EEEEeCh-----hh-HH---HHHHHH
Confidence 3455555 23456666665 66777776 555555555443 443 4444533 22 11 122222
Q ss_pred HHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 398 KRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 398 ~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
+.++.... .+++.+.+..+..|+.++++.||++|-+.. -+...|.|.+.+
T Consensus 233 ~~~~~~~~----~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds-----g~~HlAaa~g~P 282 (348)
T 1psw_A 233 AALNTEQQ----AWCRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRP 282 (348)
T ss_dssp TTSCHHHH----TTEEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCC
T ss_pred Hhhhhccc----cceEeccCcCCHHHHHHHHHhCCEEEecCC-----HHHHHHHHcCCC
Confidence 11110000 135556778899999999999999998741 234447777653
No 212
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=43.60 E-value=28 Score=42.19 Aligned_cols=67 Identities=7% Similarity=0.053 Sum_probs=52.2
Q ss_pred HHHHHHhccCceEEeCCCC-----CCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 582 IVSAYRKTERRAIFLDYDG-----TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 582 i~~~y~~a~~rlI~lD~DG-----TL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
....|.+...|.+++=++. +++..-....+|.+++.+++++|++. |++|+++||............+
T Consensus 501 ~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~a-GI~v~MiTGD~~~TA~aIA~~l 572 (920)
T 1mhs_A 501 KVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTL-GLSIKMLTGDAVGIARETSRQL 572 (920)
T ss_dssp HHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhc-CceEEEEcCCCHHHHHHHHHHc
Confidence 3455666677888887653 66654445667889999999999995 9999999999999888777654
No 213
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=36.86 E-value=28 Score=41.98 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=53.5
Q ss_pred CHHHHHHHHHhccCceEEeCCC-------------CCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYD-------------GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~D-------------GTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 644 (780)
.+....+.|.+...|.+++=++ .+++..-....+|-+++.+++++|++. |++|+++||........
T Consensus 442 ~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~a-GI~v~MiTGD~~~tA~~ 520 (885)
T 3b8c_A 442 KVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKE 520 (885)
T ss_dssp THHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHT-TCCCEEEESSCHHHHTH
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHc-CCcEEEEcCCChHHHHH
Confidence 3455666777777888888764 244432223457889999999999995 99999999999998887
Q ss_pred HhccC
Q 003999 645 WLAPC 649 (780)
Q Consensus 645 ~f~~l 649 (780)
....+
T Consensus 521 iA~~l 525 (885)
T 3b8c_A 521 TGRRL 525 (885)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 77654
No 214
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=33.80 E-value=32 Score=35.50 Aligned_cols=29 Identities=3% Similarity=0.004 Sum_probs=24.4
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
+++..+|+.||++|.. -| .+..|++++|.
T Consensus 217 ~~m~~~m~~aDlvI~~---gG--~T~~E~~~~g~ 245 (282)
T 3hbm_A 217 ENIAKLMNESNKLIIS---AS--SLVNEALLLKA 245 (282)
T ss_dssp SCHHHHHHTEEEEEEE---SS--HHHHHHHHTTC
T ss_pred HHHHHHHHHCCEEEEC---Cc--HHHHHHHHcCC
Confidence 5799999999998873 34 69999999975
No 215
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=32.78 E-value=1.5e+02 Score=24.98 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=34.9
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhcc---CCCCEEEEEcCCChhhH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCS---DPNNTVFIVSGRGRSSL 642 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~---d~g~~V~IvSGR~~~~L 642 (780)
+.++..+..+..+..+|++|+. +| ...-.+.+++|++ .++..|+++||..-...
T Consensus 34 ~~~~al~~l~~~~~dlvllD~~---~p--------~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~ 90 (122)
T 3gl9_A 34 NGQIALEKLSEFTPDLIVLXIM---MP--------VMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEED 90 (122)
T ss_dssp SHHHHHHHHTTBCCSEEEECSC---CS--------SSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecc---CC--------CCcHHHHHHHHHhcccccCCCEEEEecCCchHH
Confidence 5566666667777889999986 33 1123455555544 24678999999875443
No 216
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=30.28 E-value=1.5e+02 Score=24.78 Aligned_cols=53 Identities=11% Similarity=0.223 Sum_probs=36.5
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
+.++..+.....+.-+|++|+. +| ...-.++++++++.....|+++|+..-..
T Consensus 34 ~~~~al~~~~~~~~dlii~D~~---~p--------~~~g~~~~~~lr~~~~~~ii~~t~~~~~~ 86 (120)
T 3f6p_A 34 DGNEAVEMVEELQPDLILLDIM---LP--------NKDGVEVCREVRKKYDMPIIMLTAKDSEI 86 (120)
T ss_dssp SHHHHHHHHHTTCCSEEEEETT---ST--------TTHHHHHHHHHHTTCCSCEEEEEESSCHH
T ss_pred CHHHHHHHHhhCCCCEEEEeCC---CC--------CCCHHHHHHHHHhcCCCCEEEEECCCChH
Confidence 4566666667777889999996 22 22345666666665567888888876554
No 217
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=29.42 E-value=16 Score=35.40 Aligned_cols=29 Identities=3% Similarity=-0.229 Sum_probs=26.0
Q ss_pred EEEeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 750 EVKPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
|+.+.+.+|+.+++.+++++|+++++|.+
T Consensus 170 ~~~~~~kpk~~~~~~~~~~lgi~~~~~i~ 198 (250)
T 2c4n_A 170 KPFYVGKPSPWIIRAALNKMQAHSEETVI 198 (250)
T ss_dssp CCEECSTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred CceEeCCCCHHHHHHHHHHcCCCcceEEE
Confidence 56789999999999999999999988753
No 218
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=28.84 E-value=2.9e+02 Score=28.79 Aligned_cols=81 Identities=12% Similarity=0.037 Sum_probs=45.7
Q ss_pred CeEEEEeccccccCChH-HHHHHH-HHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 334 KKLILGIDDMDIFKGIS-LKLLAM-EQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~-~~l~A~-~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
+.+++..+--...|-.+ ..+.++ +.|.++ +++ + |.+++|. + .+ .++++++.+ +. +
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~--v--vl~g~~~-----e-~~---~~~~i~~~~----~~----~ 242 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYK--T--VFFGGPM-----D-LE---MVQPVVEQM----ET----K 242 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCE--E--EECCCTT-----T-HH---HHHHHHHTC----SS----C
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCe--E--EEEeCcc-----h-HH---HHHHHHHhc----cc----c
Confidence 45666666545677763 344444 444443 333 3 3355432 1 11 222333222 21 2
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeec
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
++.+.+..+..|+.++++.||++|-+
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~~~i~~ 268 (349)
T 3tov_A 243 PIVATGKFQLGPLAAAMNRCNLLITN 268 (349)
T ss_dssp CEECTTCCCHHHHHHHHHTCSEEEEE
T ss_pred cEEeeCCCCHHHHHHHHHhCCEEEEC
Confidence 34466788999999999999998876
No 219
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=34.50 E-value=12 Score=37.90 Aligned_cols=55 Identities=20% Similarity=0.312 Sum_probs=41.0
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++..+++.+...-.....+-+.+.++|+.|++. |++++|+||.+...+...+..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~~ 173 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKLKNE-GLKIIILSGDKEDKVKELSKEL 173 (263)
Confidence 566666666543223345678899999999984 8999999999998887777654
No 220
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=27.19 E-value=1.2e+02 Score=25.60 Aligned_cols=57 Identities=23% Similarity=0.370 Sum_probs=35.6
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSL 642 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 642 (780)
+.++......+....+|++|++- +. .-.-++.+.|++....+...|+++|+......
T Consensus 35 ~~~~a~~~l~~~~~dlii~D~~l---~~-----~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~ 91 (127)
T 3i42_A 35 SGTDALHAMSTRGYDAVFIDLNL---PD-----TSGLALVKQLRALPMEKTSKFVAVSGFAKNDL 91 (127)
T ss_dssp SHHHHHHHHHHSCCSEEEEESBC---SS-----SBHHHHHHHHHHSCCSSCCEEEEEECC-CTTC
T ss_pred CHHHHHHHHHhcCCCEEEEeCCC---CC-----CCHHHHHHHHHhhhccCCCCEEEEECCcchhH
Confidence 56677777777788999999962 20 11134444555443246788999999876543
No 221
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=24.71 E-value=31 Score=37.34 Aligned_cols=37 Identities=14% Similarity=0.185 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.++++++++.|++. |+.|+||||-....++.+...+
T Consensus 222 ~~p~~~eLi~~L~~~-G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 222 TLDEMVDLYRSLEEN-GIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp ECHHHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHCT
T ss_pred eCHHHHHHHHHHHHC-CCeEEEEcCCcHHHHHHHHHHh
Confidence 579999999999996 9999999999999999988765
No 222
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=24.21 E-value=2.4e+02 Score=23.98 Aligned_cols=56 Identities=18% Similarity=0.327 Sum_probs=35.3
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
+.++...........+|++|++ ++. .-.-++.+.|++....+...|+++|+.....
T Consensus 38 ~~~~a~~~l~~~~~dlvi~d~~---l~~-----~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 93 (140)
T 3grc_A 38 SAAQALEQVARRPYAAMTVDLN---LPD-----QDGVSLIRALRRDSRTRDLAIVVVSANAREG 93 (140)
T ss_dssp SHHHHHHHHHHSCCSEEEECSC---CSS-----SCHHHHHHHHHTSGGGTTCEEEEECTTHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCC---CCC-----CCHHHHHHHHHhCcccCCCCEEEEecCCChH
Confidence 5566677777778899999997 221 1113444444442233578999999986543
No 223
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=23.73 E-value=47 Score=33.20 Aligned_cols=48 Identities=10% Similarity=0.097 Sum_probs=34.4
Q ss_pred CceEEeCCCCCCCCCCCCCC-----CC-CHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIK-----SP-GPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~-----~p-s~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
.++.+++++||+.+..+... .. ..++.++|+++.+|+.++++|++|.+
T Consensus 3 ~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~s 56 (240)
T 3rst_A 3 SKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNS 56 (240)
T ss_dssp CEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEEE
T ss_pred CeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEecC
Confidence 56788999999998431110 11 26899999999999899988887654
No 224
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=23.70 E-value=1.1e+02 Score=30.63 Aligned_cols=65 Identities=17% Similarity=0.110 Sum_probs=41.3
Q ss_pred HHHHHHhccCceEEeCCCCCCCCCCCCCCCCC-HH-----------------HHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPG-PE-----------------VISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 582 i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps-~~-----------------~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
.+...-.+. .+|++|.||-+......-..++ .+ ...+++.+.+ .++.++|++|+.++.+.
T Consensus 167 ~lA~~l~Ad-li~ltdV~Gv~~~d~~~i~~i~~~e~~~l~~~~~~~gGm~~k~~~a~~~~~~-~~~~v~I~~~~~~~~l~ 244 (258)
T 1gs5_A 167 ALAATLGAD-LILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAART-LGRPVDIASWRHAEQLP 244 (258)
T ss_dssp HHHHHHTCE-EEEEESSSSCBCTTSCBCCEECHHHHHHHHHTTCSCTHHHHHHHHHHHHHHH-HTSCEEEEESSCGGGHH
T ss_pred HHHHHhCCc-EEEEeCCCceECCCCCCCcccCHHHHHHHHhcCCCCCcHHHHHHHHHHHHHh-CCCEEEEecCCCchHHH
Confidence 334445677 8999999999876321112222 11 2223333433 36899999999999999
Q ss_pred HHhcc
Q 003999 644 EWLAP 648 (780)
Q Consensus 644 ~~f~~ 648 (780)
+.|..
T Consensus 245 ~~~~~ 249 (258)
T 1gs5_A 245 ALFNG 249 (258)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 98864
No 225
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=22.62 E-value=2.5e+02 Score=24.17 Aligned_cols=53 Identities=19% Similarity=0.211 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhcc---CCCCEEEEEcCCChhh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCS---DPNNTVFIVSGRGRSS 641 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~---d~g~~V~IvSGR~~~~ 641 (780)
+.++...........+|++|++- + ...-.++++.|++ .+...|+++|+.....
T Consensus 40 ~~~~a~~~l~~~~~dlii~d~~l---~--------~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~ 95 (147)
T 2zay_A 40 NAIEAVPVAVKTHPHLIITEANM---P--------KISGMDLFNSLKKNPQTASIPVIALSGRATAK 95 (147)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCC---S--------SSCHHHHHHHHHTSTTTTTSCEEEEESSCCHH
T ss_pred CHHHHHHHHHcCCCCEEEEcCCC---C--------CCCHHHHHHHHHcCcccCCCCEEEEeCCCCHH
Confidence 45666666667778999999872 2 0113455555554 3577899999886543
No 226
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.04 E-value=2.3e+02 Score=24.93 Aligned_cols=56 Identities=18% Similarity=0.052 Sum_probs=34.5
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
+.++........+.-+|++|++ ++. .-.-++.+.|++....+...|+++|+..-..
T Consensus 39 ~~~~al~~l~~~~~dlii~D~~---l~~-----~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~ 94 (154)
T 3gt7_A 39 NGREAVRFLSLTRPDLIISDVL---MPE-----MDGYALCRWLKGQPDLRTIPVILLTILSDPR 94 (154)
T ss_dssp SHHHHHHHHTTCCCSEEEEESC---CSS-----SCHHHHHHHHHHSTTTTTSCEEEEECCCSHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCC---CCC-----CCHHHHHHHHHhCCCcCCCCEEEEECCCChH
Confidence 5566677777777889999997 220 1112344444443322567899999876543
No 227
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=21.99 E-value=3.2e+02 Score=27.61 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=41.9
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCC-----CCC-----------------CCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPET-----SII-----------------KSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~-----~~~-----------------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
..++..-.+..-+|++|.||-+...- +.. ....+.+.+++..+. .+..++|++|+.
T Consensus 175 a~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~~e~~~~~g~ggM~~K~~~~~~~~~--~~~~v~I~~g~~ 252 (276)
T 2ogx_A 175 FLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATAR--HIERVQVVNGLV 252 (276)
T ss_dssp HHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEHHHHHTSCSCCSSCHHHHHHHHTCS--SCCEEEEEETTS
T ss_pred HHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCHHHHHHHhCcCChHHHHHHHHHHhc--CCCeEEEEECCC
Confidence 34444456778889999999987420 000 112344444444322 267999999999
Q ss_pred hhhHHHHhcc
Q 003999 639 RSSLSEWLAP 648 (780)
Q Consensus 639 ~~~L~~~f~~ 648 (780)
...+.+.+..
T Consensus 253 ~~~l~~~l~g 262 (276)
T 2ogx_A 253 PGRLTAALRG 262 (276)
T ss_dssp TTHHHHHHTT
T ss_pred ccHHHHHHcC
Confidence 9999887753
No 228
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.91 E-value=2.6e+02 Score=23.44 Aligned_cols=57 Identities=11% Similarity=-0.005 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSL 642 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 642 (780)
+.++......+....+|++|++- +. .-.-++.+.|++....++..|+++|+......
T Consensus 35 ~~~~a~~~l~~~~~dlvi~d~~l---~~-----~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~ 91 (133)
T 3nhm_A 35 DGASGLQQALAHPPDVLISDVNM---DG-----MDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE 91 (133)
T ss_dssp SHHHHHHHHHHSCCSEEEECSSC---SS-----SCHHHHHHHHHHSTTTTTCCEEEEESCCC---
T ss_pred CHHHHHHHHhcCCCCEEEEeCCC---CC-----CCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH
Confidence 55666677777778899999872 20 11134444444432234678999999875444
No 229
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=21.62 E-value=3.5e+02 Score=26.74 Aligned_cols=75 Identities=8% Similarity=-0.006 Sum_probs=46.9
Q ss_pred HHHHHHhccCceEEe-CCCCCCCCCC---CCCC---CCCH-HH---------HHHHHHhccCCCCEEEEEcCCChhhHHH
Q 003999 582 IVSAYRKTERRAIFL-DYDGTVVPET---SIIK---SPGP-EV---------ISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 582 i~~~y~~a~~rlI~l-D~DGTL~~~~---~~~~---~ps~-~~---------~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 644 (780)
.++..-.+..-+|++ |.||-+...- +..+ .++. ++ .++...+.+ .|+.++|++|+....+.+
T Consensus 149 ~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~mk~~aa~~a~~-~gv~v~I~~g~~~~~l~~ 227 (252)
T 1z9d_A 149 LRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKRGLKIMDATASTLSMD-NDIDLVVFNMNEAGNIQR 227 (252)
T ss_dssp HHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTTTCCCSCHHHHHHHHH-TTCEEEEEETTSTTHHHH
T ss_pred HHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhccccccCHHHHHHHHH-cCCeEEEEeCCCchHHHH
Confidence 334445677888999 9999987521 1111 1111 11 234555555 388999999999999988
Q ss_pred HhccCCCceEEecCccEEee
Q 003999 645 WLAPCEMLGIAAEHGYFIRW 664 (780)
Q Consensus 645 ~f~~l~~lgliaenG~~ir~ 664 (780)
.|..- ..|+.|..
T Consensus 228 ~l~g~-------~~GT~i~~ 240 (252)
T 1z9d_A 228 VVFGE-------HIGTTVSN 240 (252)
T ss_dssp HHTTC-------CCSEEEEC
T ss_pred HHcCC-------CCceEEec
Confidence 88642 24666653
No 230
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=21.26 E-value=41 Score=41.15 Aligned_cols=40 Identities=13% Similarity=0.247 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 609 ~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..++.+++.++++.|++. |++|+++||+...........+
T Consensus 601 ~D~lr~~~~~~I~~l~~~-Gi~v~miTGD~~~ta~~ia~~l 640 (995)
T 3ar4_A 601 LDPPRKEVMGSIQLCRDA-GIRVIMITGDNKGTAIAICRRI 640 (995)
T ss_dssp ECCBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHHHHc-CCEEEEECCCCHHHHHHHHHHc
Confidence 345678899999999995 9999999999999988877654
No 231
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=20.43 E-value=1.1e+02 Score=37.52 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=59.3
Q ss_pred CCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCCC-----CCCCHHHHHHHHHhccCCCCEEEEEc
Q 003999 561 LGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSII-----KSPGPEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 561 ~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~-----~~ps~~~~~~L~~L~~d~g~~V~IvS 635 (780)
+|...+|++++|.|+.- .++..++.++|-+|.++...... ..-.....+.|.+|...-+..|++++
T Consensus 515 ~g~~~~VlaldpG~~~~---------~~~g~k~a~vd~~G~~l~~~~i~~~~~~~~~~~~~~~~l~~li~~~~~~~IaIG 585 (1030)
T 3psf_A 515 DPKIPKILSLTCGQGRF---------GADAIIAVYVNRKGDFIRDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGIN 585 (1030)
T ss_dssp SCCCCCEEEEECTTCCT---------TTSCEEEEEECTTSCEEEEEEECSCTTCSSCCHHHHHHHHHHHHHHCCSEEEEC
T ss_pred cCCCCeEEEecCCCCCC---------CCCCeEEEEECCCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEEC
Confidence 45567999999986431 12356899999999887643221 11124556777777775577888888
Q ss_pred CCChhh------HHHHhc----------cCCCceEEecCccEEeeCC
Q 003999 636 GRGRSS------LSEWLA----------PCEMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 636 GR~~~~------L~~~f~----------~l~~lgliaenG~~ir~~~ 666 (780)
|-++++ +.+.+. .+ ...++.|.|+-++...
T Consensus 586 n~s~et~~l~~~l~~~i~~~~~~~~~~~~i-~~~iV~e~gAsvYsaS 631 (1030)
T 3psf_A 586 GPNPKTQKFYKRLQEVLHKKQIVDSRGHTI-PIIYVEDEVAIRYQNS 631 (1030)
T ss_dssp CSSTHHHHHHHHHHHHHHHTTCBCTTSCBC-CEEECCCTTHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHhhccccccCCCc-cEEEecchHHHHHHhh
Confidence 866632 222111 11 3457777887666553
No 232
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.37 E-value=2.9e+02 Score=23.38 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=34.1
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhcc---CCCCEEEEEcCCChhh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCS---DPNNTVFIVSGRGRSS 641 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~---d~g~~V~IvSGR~~~~ 641 (780)
+.++.....+.....+|++|++- + ...-.+.++.|++ .+...|+++|+..-..
T Consensus 42 ~~~~a~~~l~~~~~dlii~d~~l---~--------~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 97 (143)
T 3cnb_A 42 NPFDAGDLLHTVKPDVVMLDLMM---V--------GMDGFSICHRIKSTPATANIIVIAMTGALTDD 97 (143)
T ss_dssp SHHHHHHHHHHTCCSEEEEETTC---T--------TSCHHHHHHHHHTSTTTTTSEEEEEESSCCHH
T ss_pred CHHHHHHHHHhcCCCEEEEeccc---C--------CCcHHHHHHHHHhCccccCCcEEEEeCCCCHH
Confidence 45666666677778999999862 2 0113444555544 3578899999886544
Done!