Query 004002
Match_columns 780
No_of_seqs 553 out of 3234
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 11:03:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004002.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004002hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 1.7E-26 1.2E-30 226.7 17.4 162 193-356 7-180 (183)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 1.8E-18 1.3E-22 168.7 12.3 153 114-267 6-176 (183)
3 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 6.1E-17 4.5E-21 138.3 8.7 75 192-266 2-81 (82)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 9.9E-17 7.2E-21 137.0 9.3 76 277-352 2-82 (82)
5 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 1.2E-16 8.7E-21 136.4 9.2 75 192-266 2-81 (82)
6 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 1.5E-16 1.1E-20 138.6 9.9 79 275-353 6-89 (90)
7 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 2.2E-16 1.6E-20 138.4 10.7 79 190-268 7-90 (93)
8 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 1.6E-16 1.1E-20 138.5 9.2 79 190-268 6-89 (90)
9 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 1.5E-16 1.1E-20 138.1 8.8 79 189-267 4-87 (88)
10 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 2.7E-16 1.9E-20 134.2 9.7 74 278-351 3-81 (82)
11 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 1.3E-16 9.1E-21 138.8 6.9 78 191-268 4-86 (89)
12 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 2.9E-16 2.1E-20 136.2 9.2 79 275-353 5-88 (88)
13 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 4E-16 2.9E-20 136.8 10.2 78 276-353 8-90 (93)
14 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 2.3E-16 1.7E-20 137.1 8.3 78 277-354 5-87 (89)
15 d1whwa_ d.58.7.1 (A:) Probable 99.6 5.7E-16 4.2E-20 137.1 10.9 82 190-271 6-92 (99)
16 d2cpha1 d.58.7.1 (A:454-547) P 99.6 6.3E-16 4.6E-20 135.8 10.7 79 190-268 6-91 (94)
17 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 4.7E-16 3.4E-20 136.4 9.8 79 190-268 5-88 (93)
18 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 1.4E-16 9.9E-21 138.6 6.0 80 276-355 7-89 (89)
19 d2cpza1 d.58.7.1 (A:383-484) C 99.6 5.1E-16 3.7E-20 138.4 9.7 80 276-355 17-101 (102)
20 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 8.3E-16 6E-20 139.3 11.3 100 277-380 7-108 (114)
21 d2cpza1 d.58.7.1 (A:383-484) C 99.6 4.2E-16 3.1E-20 139.0 8.8 79 191-269 17-100 (102)
22 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 2.5E-16 1.8E-20 134.2 6.6 75 192-266 1-80 (81)
23 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 2.5E-16 1.8E-20 142.8 7.0 101 191-303 6-108 (114)
24 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 5.4E-16 4E-20 132.0 8.7 73 279-351 2-79 (80)
25 d2cpha1 d.58.7.1 (A:454-547) P 99.6 1.1E-15 7.8E-20 134.3 10.7 78 276-353 7-91 (94)
26 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 4.2E-16 3.1E-20 137.3 8.1 82 274-355 13-94 (96)
27 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 8.2E-16 6E-20 134.8 9.8 79 276-354 6-89 (93)
28 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 8.8E-16 6.4E-20 133.6 9.9 81 275-355 6-89 (90)
29 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 9E-16 6.5E-20 144.0 10.6 81 190-270 40-125 (139)
30 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 6.7E-16 4.9E-20 132.7 8.9 75 195-269 1-83 (85)
31 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 1.7E-15 1.3E-19 132.6 11.7 80 274-353 8-90 (93)
32 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.6 5.3E-16 3.9E-20 134.8 7.9 79 191-269 4-87 (90)
33 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 6.2E-16 4.5E-20 133.3 8.2 76 193-268 2-82 (85)
34 d1no8a_ d.58.7.1 (A:) Nuclear 99.6 1E-15 7.3E-20 129.8 9.3 73 278-350 1-77 (78)
35 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 1.6E-15 1.2E-19 130.0 10.5 77 275-351 6-83 (83)
36 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 1.9E-15 1.4E-19 132.3 11.1 79 190-268 9-90 (93)
37 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.6 7.1E-16 5.1E-20 134.0 8.2 79 277-355 5-88 (90)
38 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 1.2E-15 8.5E-20 132.8 9.4 79 190-268 6-87 (90)
39 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 7.5E-16 5.5E-20 131.1 7.8 72 194-265 2-78 (80)
40 d1b7fa2 d.58.7.1 (A:205-289) S 99.6 1.4E-15 1E-19 130.8 9.6 74 191-264 5-85 (85)
41 d1whwa_ d.58.7.1 (A:) Probable 99.6 2.1E-15 1.5E-19 133.4 11.0 79 276-354 7-90 (99)
42 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 1E-15 7.5E-20 131.9 8.6 75 279-353 3-82 (85)
43 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 8E-16 5.8E-20 131.0 7.8 74 278-351 2-80 (81)
44 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.6 1.8E-15 1.3E-19 133.0 10.4 81 189-269 5-96 (98)
45 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 6.1E-16 4.4E-20 136.3 7.1 80 190-269 14-93 (96)
46 d1b7fa2 d.58.7.1 (A:205-289) S 99.6 1.8E-15 1.3E-19 130.1 9.9 75 275-349 4-85 (85)
47 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.6 2.8E-15 2E-19 133.2 11.3 78 189-266 15-96 (101)
48 d1fxla2 d.58.7.1 (A:119-203) H 99.6 1.6E-15 1.2E-19 130.6 9.4 74 276-349 5-85 (85)
49 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 7.8E-16 5.7E-20 133.7 7.4 78 192-269 8-88 (89)
50 d1p1ta_ d.58.7.1 (A:) Cleavage 99.6 3.7E-16 2.7E-20 139.6 5.4 79 190-268 6-89 (104)
51 d2cpda1 d.58.7.1 (A:223-308) A 99.6 8.9E-16 6.5E-20 132.3 7.7 78 192-270 8-85 (86)
52 d1fxla2 d.58.7.1 (A:119-203) H 99.6 1.6E-15 1.2E-19 130.6 9.2 73 192-264 6-85 (85)
53 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 1.6E-15 1.2E-19 142.3 9.9 78 277-354 42-124 (139)
54 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 2.6E-15 1.9E-19 131.9 10.5 78 190-267 12-91 (95)
55 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 2.7E-15 2E-19 128.5 10.3 77 189-265 5-82 (83)
56 d1no8a_ d.58.7.1 (A:) Nuclear 99.6 1.2E-15 9.1E-20 129.2 7.9 72 194-265 2-77 (78)
57 d2cqca1 d.58.7.1 (A:109-191) A 99.6 1.6E-15 1.2E-19 129.8 8.2 72 190-261 7-83 (83)
58 d2cqga1 d.58.7.1 (A:96-185) TA 99.6 2.3E-15 1.7E-19 131.3 9.3 78 190-269 6-88 (90)
59 d2adca2 d.58.7.1 (A:444-531) P 99.6 2.4E-15 1.7E-19 130.1 9.2 76 191-266 9-86 (88)
60 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 1.7E-15 1.2E-19 130.2 8.2 74 280-353 1-82 (85)
61 d2cqda1 d.58.7.1 (A:1-103) RNA 99.6 3.3E-15 2.4E-19 133.3 10.2 79 190-269 8-91 (103)
62 d1p1ta_ d.58.7.1 (A:) Cleavage 99.6 2E-15 1.5E-19 134.6 8.6 78 277-354 8-90 (104)
63 d1whxa_ d.58.7.1 (A:) Probable 99.6 1.8E-15 1.3E-19 136.1 8.2 77 190-267 8-84 (111)
64 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.6 1.5E-15 1.1E-19 129.8 7.3 75 280-354 1-81 (83)
65 d2cqda1 d.58.7.1 (A:1-103) RNA 99.6 3.1E-15 2.2E-19 133.5 9.6 80 273-353 6-90 (103)
66 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.6 2.9E-15 2.1E-19 132.1 9.3 76 277-353 18-93 (96)
67 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.6 8.4E-16 6.1E-20 131.5 5.4 75 195-269 1-81 (83)
68 d2cqca1 d.58.7.1 (A:109-191) A 99.6 3.8E-15 2.8E-19 127.4 9.5 71 276-346 8-83 (83)
69 d2cq4a1 d.58.7.1 (A:132-232) R 99.6 1.1E-15 8.2E-20 136.1 6.3 77 276-353 17-98 (101)
70 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 5.2E-15 3.8E-19 129.9 10.4 77 276-352 13-91 (95)
71 d2ghpa3 d.58.7.1 (A:206-291) U 99.6 2.5E-15 1.8E-19 129.6 8.0 76 276-352 3-85 (86)
72 d1wf2a_ d.58.7.1 (A:) Heteroge 99.6 4E-15 2.9E-19 131.7 9.3 75 276-353 14-89 (98)
73 d2cpea1 d.58.7.1 (A:353-453) R 99.6 2.3E-15 1.6E-19 133.3 7.7 82 188-269 4-98 (101)
74 d2ghpa3 d.58.7.1 (A:206-291) U 99.6 1.8E-15 1.3E-19 130.6 6.7 76 191-267 3-85 (86)
75 d1nu4a_ d.58.7.1 (A:) Spliceso 99.6 1.9E-15 1.4E-19 131.7 7.0 79 190-268 1-85 (91)
76 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.6 1.2E-15 8.9E-20 132.2 5.7 79 190-270 3-81 (88)
77 d2cpxa1 d.58.7.1 (A:291-392) R 99.6 9.7E-16 7E-20 136.0 5.1 81 190-270 16-101 (102)
78 d2cpda1 d.58.7.1 (A:223-308) A 99.6 4.3E-15 3.1E-19 127.9 9.1 76 277-353 8-83 (86)
79 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.6 9.7E-16 7.1E-20 130.5 4.9 76 279-355 3-79 (80)
80 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 6.9E-16 5E-20 131.5 3.9 77 193-270 2-79 (80)
81 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 4E-15 2.9E-19 130.8 9.0 82 192-273 1-91 (96)
82 d2cpja1 d.58.7.1 (A:65-150) No 99.5 3.8E-15 2.8E-19 128.6 8.6 76 277-353 8-83 (86)
83 d2adca1 d.58.7.1 (A:335-443) P 99.5 4.3E-15 3.1E-19 133.2 9.0 76 277-352 2-78 (109)
84 d2adca2 d.58.7.1 (A:444-531) P 99.5 6.5E-15 4.7E-19 127.3 9.8 77 276-352 9-87 (88)
85 d2adca1 d.58.7.1 (A:335-443) P 99.5 7.7E-15 5.6E-19 131.6 10.5 77 192-268 2-79 (109)
86 d1whxa_ d.58.7.1 (A:) Probable 99.5 4.5E-15 3.2E-19 133.5 8.9 77 276-353 9-85 (111)
87 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.5 5.5E-15 4E-19 130.3 9.2 77 191-268 17-93 (96)
88 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 3.3E-15 2.4E-19 133.5 7.8 77 277-354 20-101 (103)
89 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 5.9E-15 4.3E-19 124.0 8.7 70 194-264 1-75 (75)
90 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 4.4E-15 3.2E-19 126.0 7.9 74 277-353 5-78 (79)
91 d2cpea1 d.58.7.1 (A:353-453) R 99.5 4.5E-15 3.3E-19 131.3 8.3 81 274-354 5-98 (101)
92 d2cqga1 d.58.7.1 (A:96-185) TA 99.5 7.4E-15 5.4E-19 127.9 9.2 77 276-354 7-88 (90)
93 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 6.6E-15 4.8E-19 126.5 8.5 74 191-265 5-83 (84)
94 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.5 5.7E-15 4.2E-19 131.2 8.3 77 276-352 17-97 (101)
95 d2cpja1 d.58.7.1 (A:65-150) No 99.5 5.2E-15 3.8E-19 127.7 7.8 76 192-268 8-83 (86)
96 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 2.6E-15 1.9E-19 130.2 5.8 77 276-354 4-80 (88)
97 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.5 1.4E-14 1E-18 127.3 10.7 78 277-354 8-96 (98)
98 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 3.8E-15 2.8E-19 133.1 7.0 77 192-269 20-101 (103)
99 d1l3ka2 d.58.7.1 (A:103-181) N 99.5 7.4E-15 5.4E-19 124.2 8.4 72 192-264 2-78 (79)
100 d1uawa_ d.58.7.1 (A:) Musashi- 99.5 2.1E-15 1.6E-19 127.6 4.7 71 193-264 1-76 (77)
101 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 1.4E-14 1E-18 124.4 9.8 73 277-350 6-83 (84)
102 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 1E-14 7.6E-19 122.5 8.5 70 279-349 1-75 (75)
103 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 1.5E-14 1.1E-18 121.7 9.5 72 280-353 1-72 (75)
104 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 7.2E-15 5.3E-19 128.0 7.8 79 277-355 3-87 (91)
105 d2cq4a1 d.58.7.1 (A:132-232) R 99.5 2E-15 1.4E-19 134.5 4.0 75 191-266 17-96 (101)
106 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 1.2E-14 9.1E-19 128.5 9.2 76 190-268 13-89 (98)
107 d1wg1a_ d.58.7.1 (A:) Probable 99.5 6.7E-15 4.9E-19 127.6 7.3 75 277-353 5-79 (88)
108 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 7.3E-15 5.3E-19 124.7 7.4 75 190-267 3-77 (79)
109 d2adba1 d.58.7.1 (A:177-284) P 99.5 1.1E-14 7.8E-19 130.9 8.9 80 190-269 5-87 (108)
110 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 4.9E-15 3.6E-19 131.4 6.4 80 276-355 17-101 (102)
111 d1uawa_ d.58.7.1 (A:) Musashi- 99.5 6.2E-15 4.5E-19 124.7 6.3 71 278-349 1-76 (77)
112 d1l3ka2 d.58.7.1 (A:103-181) N 99.5 1.9E-14 1.4E-18 121.6 9.0 71 278-349 3-78 (79)
113 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.5 3.3E-15 2.4E-19 130.4 4.3 76 276-352 12-91 (91)
114 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.5 2.4E-14 1.8E-18 127.4 10.0 79 190-270 13-97 (104)
115 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.5 2.1E-15 1.6E-19 131.6 3.0 77 190-267 11-91 (91)
116 d2msta_ d.58.7.1 (A:) Neural R 99.5 1.4E-14 9.9E-19 121.2 7.8 70 279-349 1-75 (75)
117 d2msta_ d.58.7.1 (A:) Neural R 99.5 8.5E-15 6.2E-19 122.4 6.2 70 194-264 1-75 (75)
118 d1wg1a_ d.58.7.1 (A:) Probable 99.5 7.1E-15 5.2E-19 127.4 5.8 76 191-268 4-79 (88)
119 d1x0fa1 d.58.7.1 (A:183-257) N 99.5 9.1E-15 6.6E-19 123.1 6.1 70 194-264 1-75 (75)
120 d1whya_ d.58.7.1 (A:) Putative 99.5 3.3E-14 2.4E-18 125.3 10.1 77 276-353 16-94 (97)
121 d1whya_ d.58.7.1 (A:) Putative 99.5 3.2E-14 2.4E-18 125.3 10.0 78 190-268 15-94 (97)
122 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 2.7E-14 2E-18 126.2 9.4 78 189-268 12-89 (98)
123 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 1.8E-14 1.3E-18 121.1 7.7 71 195-267 1-71 (75)
124 d3begb1 d.58.7.1 (B:121-207) S 99.5 1.8E-14 1.3E-18 124.5 7.4 73 194-268 2-74 (87)
125 d1zh5a2 d.58.7.1 (A:105-189) L 99.5 2.5E-14 1.8E-18 123.1 8.0 73 191-264 5-81 (85)
126 d3begb1 d.58.7.1 (B:121-207) S 99.5 1.2E-14 8.9E-19 125.5 5.9 73 279-353 2-74 (87)
127 d2cq1a1 d.58.7.1 (A:51-138) Po 99.5 5.4E-14 3.9E-18 121.5 10.0 79 189-268 5-85 (88)
128 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.5 2.1E-14 1.5E-18 119.3 6.5 66 195-260 1-71 (72)
129 d2adba1 d.58.7.1 (A:177-284) P 99.5 3E-14 2.2E-18 127.9 7.6 78 276-353 6-86 (108)
130 d1x0fa1 d.58.7.1 (A:183-257) N 99.5 1.9E-14 1.4E-18 121.1 5.7 70 279-349 1-75 (75)
131 d2cpia1 d.58.7.1 (A:101-189) E 99.5 3.7E-14 2.7E-18 123.0 7.8 72 276-347 7-89 (89)
132 d1zh5a2 d.58.7.1 (A:105-189) L 99.5 3.7E-14 2.7E-18 122.0 7.7 74 276-350 5-82 (85)
133 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 4.9E-14 3.5E-18 123.8 8.4 78 278-355 2-88 (96)
134 d1wexa_ d.58.7.1 (A:) Heteroge 99.5 1.9E-13 1.3E-17 121.9 12.1 79 189-268 12-92 (104)
135 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.5 1.8E-14 1.3E-18 119.7 5.0 66 280-345 1-71 (72)
136 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.5 9.8E-14 7.2E-18 123.4 10.1 77 276-354 14-96 (104)
137 d1wg4a_ d.58.7.1 (A:) Splicing 99.4 3.1E-14 2.3E-18 125.8 6.5 76 276-353 14-89 (98)
138 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 7.5E-14 5.5E-18 117.2 8.3 71 278-349 1-74 (75)
139 d2cq1a1 d.58.7.1 (A:51-138) Po 99.4 1.8E-13 1.3E-17 118.2 10.3 78 275-353 6-85 (88)
140 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 3.6E-14 2.6E-18 122.0 5.4 74 191-264 8-86 (86)
141 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 7.9E-14 5.8E-18 119.8 7.2 74 276-349 8-86 (86)
142 d1wg5a_ d.58.7.1 (A:) Heteroge 99.4 2.3E-13 1.7E-17 121.2 10.3 78 190-268 13-95 (104)
143 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 1.8E-13 1.3E-17 121.1 9.3 78 275-353 16-96 (99)
144 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 1.1E-13 8.3E-18 116.1 7.6 71 193-264 1-74 (75)
145 d1wexa_ d.58.7.1 (A:) Heteroge 99.4 3.6E-13 2.6E-17 120.0 11.3 78 275-353 13-92 (104)
146 d1weza_ d.58.7.1 (A:) Heteroge 99.4 2E-13 1.5E-17 121.3 8.3 79 189-268 12-93 (102)
147 d2cpia1 d.58.7.1 (A:101-189) E 99.4 8.5E-14 6.2E-18 120.7 5.6 71 192-262 8-89 (89)
148 d1wg5a_ d.58.7.1 (A:) Heteroge 99.4 6E-13 4.4E-17 118.4 10.6 78 275-353 13-95 (104)
149 d1weza_ d.58.7.1 (A:) Heteroge 99.4 2.4E-13 1.8E-17 120.7 7.9 78 275-354 13-94 (102)
150 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 2.3E-13 1.6E-17 120.4 7.5 79 189-268 15-96 (99)
151 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 5.1E-13 3.7E-17 115.8 9.3 77 276-353 7-86 (89)
152 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 4.6E-13 3.3E-17 116.1 8.4 78 189-267 5-85 (89)
153 d1weya_ d.58.7.1 (A:) Calcipre 99.4 1.5E-13 1.1E-17 122.7 4.4 79 190-269 3-86 (104)
154 d1weya_ d.58.7.1 (A:) Calcipre 99.3 1.9E-13 1.4E-17 122.1 4.7 78 276-354 4-86 (104)
155 d2cpya1 d.58.7.1 (A:536-638) R 99.3 4.1E-13 3E-17 119.2 5.8 75 276-351 7-86 (103)
156 d2cpya1 d.58.7.1 (A:536-638) R 99.3 3.3E-13 2.4E-17 119.8 4.2 74 191-265 7-85 (103)
157 d1u2fa_ d.58.7.1 (A:) Splicing 99.3 4.9E-14 3.5E-18 122.2 -1.3 72 193-265 2-83 (90)
158 d1wela1 d.58.7.1 (A:412-523) R 99.3 1.5E-12 1.1E-16 117.5 5.6 77 276-353 17-98 (112)
159 d1u2fa_ d.58.7.1 (A:) Splicing 99.2 1.3E-13 9.6E-18 119.4 -2.0 71 278-349 2-82 (90)
160 d1wela1 d.58.7.1 (A:412-523) R 99.2 1.1E-12 8.2E-17 118.3 3.7 75 191-266 17-96 (112)
161 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.7e-26 Score=226.66 Aligned_cols=162 Identities=20% Similarity=0.387 Sum_probs=139.5
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk 267 (780)
|+|||+|||+++|+++|+++|++||+|.+++ .+++++|||||+|.+.++|++|+.. .+..+..+.+.+....+.
T Consensus 7 r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~~~~~ 85 (183)
T d1u1qa_ 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR 85 (183)
T ss_dssp HEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEECCCT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhhhhhc
Confidence 8999999999999999999999999999887 2678999999999999999999995 566677777777665444
Q ss_pred CCC--CCCCCCccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccC
Q 004002 268 DNP--SDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIA 340 (780)
Q Consensus 268 ~~~--s~~~~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~ 340 (780)
... .......++|||+|||..+|+++|+++|+.||.|..+.+ ++.++|||||+|.+.++|.+||+ +++..+.
T Consensus 86 ~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~ 164 (183)
T d1u1qa_ 86 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVN 164 (183)
T ss_dssp TGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEET
T ss_pred ccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeEC
Confidence 322 123345579999999999999999999999999999865 46788999999999999999997 7999999
Q ss_pred CceEEEEecCCCchhh
Q 004002 341 GKRIKLEPSRPGGARR 356 (780)
Q Consensus 341 Gr~L~V~~a~~k~~r~ 356 (780)
|++|+|.+|.++.++.
T Consensus 165 G~~i~V~~A~~k~e~~ 180 (183)
T d1u1qa_ 165 GHNCEVRKALSKQEMA 180 (183)
T ss_dssp TEEEEEEECCCHHHHH
T ss_pred CEEEEEEecCCccccc
Confidence 9999999998876543
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.8e-18 Score=168.74 Aligned_cols=153 Identities=18% Similarity=0.291 Sum_probs=121.8
Q ss_pred CceeeeccCCCCCChHHHHHHhcCCCcE---EEeccCccCcccceEEEeecCccccCcc---cccccCCCC-------cc
Q 004002 114 MDDFDLRGLPSSLEDLEDYDIFGSGGGM---ELEGEPQESLSMSMSKISISDSASGNGL---LHYSVPNGA-------GT 180 (780)
Q Consensus 114 ~~el~V~~Lp~s~~E~el~dlFs~~G~i---~V~~d~~esa~~g~~~v~~~~~~~a~~~---~~~~l~n~~-------~k 180 (780)
++++||++||.+++|.+++++|+.+|.| .+..+......++++++.|.+...+..+ ....+.... ..
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~ 85 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 85 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEECCCT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcccccchhhhhhhhc
Confidence 3689999999999999999999999997 5666777888889999999987665422 111111110 01
Q ss_pred cCCCCCCCCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCcccc
Q 004002 181 VAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLR 255 (780)
Q Consensus 181 ~~g~~~~~e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~ 255 (780)
............++|||+|||+++|+++|+++|+.||.|..+. .+++++|||||+|.+.++|++|++ +++..+.
T Consensus 86 ~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~ 164 (183)
T d1u1qa_ 86 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVN 164 (183)
T ss_dssp TGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEET
T ss_pred ccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeEC
Confidence 1111122345668999999999999999999999999999886 257899999999999999999997 7889999
Q ss_pred ccccccccCCCC
Q 004002 256 RRKLDIHFSIPK 267 (780)
Q Consensus 256 gr~I~V~~a~pk 267 (780)
|++|.|.+|.++
T Consensus 165 G~~i~V~~A~~k 176 (183)
T d1u1qa_ 165 GHNCEVRKALSK 176 (183)
T ss_dssp TEEEEEEECCCH
T ss_pred CEEEEEEecCCc
Confidence 999999998765
No 3
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.66 E-value=6.1e-17 Score=138.29 Aligned_cols=75 Identities=23% Similarity=0.453 Sum_probs=71.2
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
+++|||+|||+++|+++|+++|++||+|.+++ .+++++|||||+|.+.++|++|++.|+|..+.|++|+|+|++|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 57899999999999999999999999999987 3678999999999999999999999999999999999999976
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.66 E-value=9.9e-17 Score=136.98 Aligned_cols=76 Identities=28% Similarity=0.436 Sum_probs=71.1
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.|||..+.|++|+|++|+|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 357999999999999999999999999999975 456789999999999999999999999999999999999988
Q ss_pred C
Q 004002 352 G 352 (780)
Q Consensus 352 k 352 (780)
+
T Consensus 82 g 82 (82)
T d1b7fa1 82 G 82 (82)
T ss_dssp C
T ss_pred C
Confidence 5
No 5
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.2e-16 Score=136.37 Aligned_cols=75 Identities=23% Similarity=0.481 Sum_probs=70.8
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
.++|||+|||+++++++|+++|++||+|.+|+ ..++++|||||+|.+.++|++|++.|+|..|.|++|+|.||+|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 46899999999999999999999999999987 2578999999999999999999999999999999999999986
No 6
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.5e-16 Score=138.61 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=73.5
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
....+|||+|||.++++++|+++|++||.|..|++ ++.++|||||+|.+.++|++||+.|||..+.|++|+|++|
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 35678999999999999999999999999999975 4678999999999999999999999999999999999999
Q ss_pred CCCc
Q 004002 350 RPGG 353 (780)
Q Consensus 350 ~~k~ 353 (780)
+|+.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 9874
No 7
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.2e-16 Score=138.42 Aligned_cols=79 Identities=16% Similarity=0.326 Sum_probs=73.8
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...++|||+|||.++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|+|..|.|++|+|+||
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 3468999999999999999999999999999987 36889999999999999999999999999999999999999
Q ss_pred CCCC
Q 004002 265 IPKD 268 (780)
Q Consensus 265 ~pk~ 268 (780)
.++.
T Consensus 87 ~~~~ 90 (93)
T d1x5ua1 87 SAHN 90 (93)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 8765
No 8
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.6e-16 Score=138.48 Aligned_cols=79 Identities=23% Similarity=0.475 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
.+.++|||+|||.++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|+|..|.|++|.|.|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 4568999999999999999999999999999987 35789999999999999999999999999999999999999
Q ss_pred CCCC
Q 004002 265 IPKD 268 (780)
Q Consensus 265 ~pk~ 268 (780)
+|+.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8865
No 9
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.64 E-value=1.5e-16 Score=138.07 Aligned_cols=79 Identities=20% Similarity=0.434 Sum_probs=72.6
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCcccccccccccc
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~ 263 (780)
....++|||+|||.++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|+|..|.|++|.|.|
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34568999999999999999999999999999987 3578999999999999999999999999999999999999
Q ss_pred CCCC
Q 004002 264 SIPK 267 (780)
Q Consensus 264 a~pk 267 (780)
+.++
T Consensus 84 a~~k 87 (88)
T d1rk8a_ 84 CFVK 87 (88)
T ss_dssp SEEC
T ss_pred ecCC
Confidence 9764
No 10
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=2.7e-16 Score=134.17 Aligned_cols=74 Identities=30% Similarity=0.515 Sum_probs=69.9
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
++|||+|||.++++++|+++|++||.|++|++ .+.++|||||+|.+.++|++|++.|||..+.|++|+|.+|+|
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 47999999999999999999999999999975 457789999999999999999999999999999999999987
No 11
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.3e-16 Score=138.79 Aligned_cols=78 Identities=27% Similarity=0.502 Sum_probs=73.3
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
..++|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|++..|.|++|.|.|+.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 468999999999999999999999999999987 358899999999999999999999999999999999999998
Q ss_pred CCC
Q 004002 266 PKD 268 (780)
Q Consensus 266 pk~ 268 (780)
|+.
T Consensus 84 p~~ 86 (89)
T d2cqba1 84 PMR 86 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 12
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.63 E-value=2.9e-16 Score=136.19 Aligned_cols=79 Identities=24% Similarity=0.388 Sum_probs=72.3
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
....+|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++|++.|||..+.|++|+|+||
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 34578999999999999999999999999999875 4667899999999999999999999999999999999999
Q ss_pred CCCc
Q 004002 350 RPGG 353 (780)
Q Consensus 350 ~~k~ 353 (780)
.+++
T Consensus 85 ~~kG 88 (88)
T d1rk8a_ 85 FVKG 88 (88)
T ss_dssp EECC
T ss_pred cCCC
Confidence 8763
No 13
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=4e-16 Score=136.77 Aligned_cols=78 Identities=26% Similarity=0.330 Sum_probs=73.0
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
..++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.|||..+.|+.|+|.+|+
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~ 87 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKAS 87 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETT
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3468999999999999999999999999999975 56789999999999999999999999999999999999998
Q ss_pred CCc
Q 004002 351 PGG 353 (780)
Q Consensus 351 ~k~ 353 (780)
++.
T Consensus 88 ~~~ 90 (93)
T d1x5ua1 88 AHN 90 (93)
T ss_dssp TTS
T ss_pred CCC
Confidence 875
No 14
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.3e-16 Score=137.05 Aligned_cols=78 Identities=27% Similarity=0.452 Sum_probs=72.9
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++|++.|||..+.|+.|+|++|+|
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p 84 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKP 84 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 468999999999999999999999999999975 567899999999999999999999999999999999999998
Q ss_pred Cch
Q 004002 352 GGA 354 (780)
Q Consensus 352 k~~ 354 (780)
+..
T Consensus 85 ~~~ 87 (89)
T d2cqba1 85 MRI 87 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 15
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=5.7e-16 Score=137.15 Aligned_cols=82 Identities=27% Similarity=0.405 Sum_probs=75.2
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
..+++|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++||+.|++..|.|++|.|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 4568899999999999999999999999999998 35889999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 004002 265 IPKDNPS 271 (780)
Q Consensus 265 ~pk~~~s 271 (780)
.++....
T Consensus 86 ~~~~~~~ 92 (99)
T d1whwa_ 86 TIKKEAS 92 (99)
T ss_dssp CCCSTTC
T ss_pred CCCCccC
Confidence 8766443
No 16
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=6.3e-16 Score=135.77 Aligned_cols=79 Identities=27% Similarity=0.519 Sum_probs=73.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe------CCCcceEEEEEEecHHHHHHHHHHc-cCccccccccccc
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRAL-QNKPLRRRKLDIH 262 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~------tgkskG~aFV~F~~~e~A~~Al~~L-ng~~l~gr~I~V~ 262 (780)
..+++|||+|||+++++++|+++|++||.|..|+. +|+++|||||+|.+.++|++|++.| ++..|.|++|.|.
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 46689999999999999999999999999999872 5789999999999999999999998 8999999999999
Q ss_pred cCCCCC
Q 004002 263 FSIPKD 268 (780)
Q Consensus 263 ~a~pk~ 268 (780)
||.++.
T Consensus 86 ~A~~~~ 91 (94)
T d2cpha1 86 WADSEV 91 (94)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 997654
No 17
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.7e-16 Score=136.35 Aligned_cols=79 Identities=25% Similarity=0.428 Sum_probs=73.1
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
..+++|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|+|..|.|++|.|.|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 3578999999999999999999999999999987 36789999999999999999999999999999999999998
Q ss_pred CCCC
Q 004002 265 IPKD 268 (780)
Q Consensus 265 ~pk~ 268 (780)
....
T Consensus 85 ~~~~ 88 (93)
T d1h2vz_ 85 AGFK 88 (93)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 6543
No 18
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.4e-16 Score=138.57 Aligned_cols=80 Identities=23% Similarity=0.383 Sum_probs=72.7
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEeC---CCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~---g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k 352 (780)
..++|||+|||.++++++|+++|++||.|+.+++. +.++|||||+|.+.++|++||+.|||..+.|++|+|.+++++
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 34589999999999999999999999999999862 346799999999999999999999999999999999999987
Q ss_pred chh
Q 004002 353 GAR 355 (780)
Q Consensus 353 ~~r 355 (780)
.+|
T Consensus 87 ~~R 89 (89)
T d1cvja2 87 KER 89 (89)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 19
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=5.1e-16 Score=138.43 Aligned_cols=80 Identities=25% Similarity=0.432 Sum_probs=73.9
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
...+|||+|||.++++++|+++|++||.|+++++ ++.++|||||+|.+.++|++||+.|||..|.|++|+|++++
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 3468999999999999999999999999999864 56778999999999999999999999999999999999999
Q ss_pred CCchh
Q 004002 351 PGGAR 355 (780)
Q Consensus 351 ~k~~r 355 (780)
++.++
T Consensus 97 ~k~~~ 101 (102)
T d2cpza1 97 SKNDS 101 (102)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98754
No 20
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=8.3e-16 Score=139.33 Aligned_cols=100 Identities=21% Similarity=0.411 Sum_probs=82.2
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe--CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCch
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE--TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 354 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~--~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~~ 354 (780)
.++|||+|||.++++++|+++|++||.|+.|++ ++.++|||||+|.+.++|.+||+.|||..|.|+.|+|.++.+...
T Consensus 7 ~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~~~ 86 (114)
T d2f9da1 7 NRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRA 86 (114)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCch
Confidence 468999999999999999999999999999986 567789999999999999999999999999999999999875432
Q ss_pred hhhHhhhhchhccHHHHHHHHhhhCC
Q 004002 355 RRNLMLQLNQELEQDESRILQHQVGS 380 (780)
Q Consensus 355 r~~~l~ql~~~~~~~~~~~~~~~~Gs 380 (780)
. ........++++.....++|.
T Consensus 87 ~----~~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 87 F----QKMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp T----TTSCHHHHHHHHHHHHHHHCC
T ss_pred h----hhhHHHHHHHHHHHHHHHhCC
Confidence 2 222223344556666666664
No 21
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=4.2e-16 Score=138.97 Aligned_cols=79 Identities=16% Similarity=0.387 Sum_probs=73.5
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
+.++|||+|||+++|+++|+++|++||.|.+++ .+++++|||||+|.+.++|++||++|+|..|.|++|+|+|+.
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 457899999999999999999999999998876 367899999999999999999999999999999999999998
Q ss_pred CCCC
Q 004002 266 PKDN 269 (780)
Q Consensus 266 pk~~ 269 (780)
++..
T Consensus 97 ~k~~ 100 (102)
T d2cpza1 97 SKND 100 (102)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8764
No 22
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.61 E-value=2.5e-16 Score=134.18 Aligned_cols=75 Identities=19% Similarity=0.227 Sum_probs=66.6
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
.+||||+|||+++|+++|+++|++||.|..++ ..++++|||||+|.+.++|++|++.|+|..+.|++|.|+++.|
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 37999999999999999999999999997665 3688999999999999999999999999999999999999987
No 23
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=2.5e-16 Score=142.77 Aligned_cols=101 Identities=25% Similarity=0.404 Sum_probs=84.6
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE--eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY--TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~--~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
.+++|||+|||.++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|.+|++.|+|..|.|++|.|.++.+..
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~~ 85 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANR 85 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCc
Confidence 568999999999999999999999999999988 467889999999999999999999999999999999999986432
Q ss_pred CCCCCCCCccceeecCCCCCCChhHHHHHhcccCC
Q 004002 269 NPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGE 303 (780)
Q Consensus 269 ~~s~~~~~~~~L~V~NLp~~vteedL~~~Fs~yG~ 303 (780)
... .......+++++.+..+||.
T Consensus 86 ~~~------------~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 86 AFQ------------KMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp HTT------------TSCHHHHHHHHHHHHHHHCC
T ss_pred hhh------------hhHHHHHHHHHHHHHHHhCC
Confidence 111 11222346778888888774
No 24
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=5.4e-16 Score=132.00 Aligned_cols=73 Identities=29% Similarity=0.375 Sum_probs=68.9
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
+|||+|||..+|+++|+++|++||+|++|++ +++++|||||+|.++++|.+|++.|||..+.|++|+|.+++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 6999999999999999999999999999986 467789999999999999999999999999999999999863
No 25
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61 E-value=1.1e-15 Score=134.26 Aligned_cols=78 Identities=24% Similarity=0.477 Sum_probs=72.3
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe------CCCcccEEEEEEcCHHHHHHHHHHh-CCCccCCceEEEEe
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALKSL-NRSDIAGKRIKLEP 348 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~------~g~srG~aFV~F~~~e~A~~Ai~~L-nG~~i~Gr~L~V~~ 348 (780)
...+|||+|||.++++++|+++|++||.|+.|++ ++.++|||||+|.+.++|++||+.| ||..+.|++|+|++
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 4568999999999999999999999999999986 4567899999999999999999999 89999999999999
Q ss_pred cCCCc
Q 004002 349 SRPGG 353 (780)
Q Consensus 349 a~~k~ 353 (780)
|+++.
T Consensus 87 A~~~~ 91 (94)
T d2cpha1 87 ADSEV 91 (94)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98765
No 26
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.61 E-value=4.2e-16 Score=137.32 Aligned_cols=82 Identities=21% Similarity=0.335 Sum_probs=76.9
Q ss_pred CCCccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 274 DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 274 ~~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
....++|||+|||.++|+++|+++|++||.|..++.++.+++||||+|.+.++|++|++.|||..+.|++|+|.++.++.
T Consensus 13 ~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~ 92 (96)
T d1fjca_ 13 VRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKG 92 (96)
T ss_dssp TTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 33567999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hh
Q 004002 354 AR 355 (780)
Q Consensus 354 ~r 355 (780)
.+
T Consensus 93 ~~ 94 (96)
T d1fjca_ 93 GT 94 (96)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 27
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=8.2e-16 Score=134.76 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=72.7
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
..++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.|||..+.|+.|+|+|+.
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 3568999999999999999999999999999975 56678999999999999999999999999999999999997
Q ss_pred CCch
Q 004002 351 PGGA 354 (780)
Q Consensus 351 ~k~~ 354 (780)
....
T Consensus 86 ~~~~ 89 (93)
T d1h2vz_ 86 GFKE 89 (93)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 6554
No 28
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=8.8e-16 Score=133.61 Aligned_cols=81 Identities=30% Similarity=0.384 Sum_probs=73.1
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEe---CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE---TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~---~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
...++|||+|||.++|+++|+++|++||.|+.|++ ....++||||+|.+.++|++|++.|||..+.|+.|+|.+|++
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 34578999999999999999999999999999986 234578999999999999999999999999999999999987
Q ss_pred Cchh
Q 004002 352 GGAR 355 (780)
Q Consensus 352 k~~r 355 (780)
+..+
T Consensus 86 ~~~~ 89 (90)
T d2cqia1 86 PSSQ 89 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6543
No 29
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.60 E-value=9e-16 Score=144.03 Aligned_cols=81 Identities=23% Similarity=0.453 Sum_probs=74.2
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~-----tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...++|||+|||+++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++||+.|+|..|.|++|+|+|+
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 44579999999999999999999999999998872 5889999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 004002 265 IPKDNP 270 (780)
Q Consensus 265 ~pk~~~ 270 (780)
.++..+
T Consensus 120 ~~~~~~ 125 (139)
T d1u6fa1 120 ASGHQR 125 (139)
T ss_dssp SCCCCC
T ss_pred CCCCCC
Confidence 876543
No 30
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=6.7e-16 Score=132.70 Aligned_cols=75 Identities=24% Similarity=0.456 Sum_probs=68.3
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----C---CCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 195 LFVRNINSNVEDSELRALFEQYGDIRTLYT-----A---CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 195 LfVgNLp~~vteeeLr~lF~~yG~I~sv~~-----t---gkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
|||+|||+++|+++|+++|++||+|.+++. + +++||||||+|.+.++|++|++.|+|..|.|++|.|+|+.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 899999999999999999999999998872 1 25799999999999999999999999999999999999876
Q ss_pred CCC
Q 004002 267 KDN 269 (780)
Q Consensus 267 k~~ 269 (780)
...
T Consensus 81 ~~k 83 (85)
T d2cpfa1 81 ATK 83 (85)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 31
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.7e-15 Score=132.59 Aligned_cols=80 Identities=21% Similarity=0.389 Sum_probs=72.8
Q ss_pred CCCccceeecCCCCCCChhHHHHHhcccCCeeEEEe---CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 274 DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE---TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 274 ~~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~---~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
.....+|||+|||.++++++|+++|++||.|+.|++ ...++|||||+|.+.++|++||+.|||..+.|++|+|++|+
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 344568999999999999999999999999999976 33468999999999999999999999999999999999999
Q ss_pred CCc
Q 004002 351 PGG 353 (780)
Q Consensus 351 ~k~ 353 (780)
++.
T Consensus 88 ~r~ 90 (93)
T d2cq3a1 88 ARV 90 (93)
T ss_dssp SSC
T ss_pred cCC
Confidence 864
No 32
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=5.3e-16 Score=134.79 Aligned_cols=79 Identities=23% Similarity=0.476 Sum_probs=73.1
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
..++|||+|||+++|+++|+++|++||.|..+. .+++++|||||+|.+.++|++|++.|+|..|.|++|.|+++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 458899999999999999999999999999886 357899999999999999999999999999999999999998
Q ss_pred CCCC
Q 004002 266 PKDN 269 (780)
Q Consensus 266 pk~~ 269 (780)
++..
T Consensus 84 ~~~~ 87 (90)
T d1x5sa1 84 KSSD 87 (90)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7653
No 33
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=6.2e-16 Score=133.31 Aligned_cols=76 Identities=18% Similarity=0.421 Sum_probs=71.3
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk 267 (780)
.+|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.++++|++|++.|+|..|.|++|.|.|+.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 4799999999999999999999999999987 35899999999999999999999999999999999999999765
Q ss_pred C
Q 004002 268 D 268 (780)
Q Consensus 268 ~ 268 (780)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 4
No 34
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=1e-15 Score=129.77 Aligned_cols=73 Identities=25% Similarity=0.395 Sum_probs=68.7
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
+.|||+|||.++++++|+++|++||.|++|++ +++++|||||+|.+.++|++|++.|||+.+.|++|+|+++.
T Consensus 1 grl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 1 GKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 36999999999999999999999999999986 56678999999999999999999999999999999999885
No 35
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.60 E-value=1.6e-15 Score=129.99 Aligned_cols=77 Identities=22% Similarity=0.325 Sum_probs=71.3
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccC-CceEEEEecCC
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIA-GKRIKLEPSRP 351 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~-Gr~L~V~~a~~ 351 (780)
.+.++|||+|||.++++++|+++|++||.|+.|++...++|+|||+|.+.++|++|++.|||..+. |++|+|+||+.
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~akk 83 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAKK 83 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEecC
Confidence 345799999999999999999999999999999998778899999999999999999999999884 68999999973
No 36
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.9e-15 Score=132.28 Aligned_cols=79 Identities=23% Similarity=0.405 Sum_probs=72.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~---tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
...++|||+|||+++|+++|+++|++||+|..|+. ...++|||||+|.+.++|++|++.|++..|.|++|+|.||.+
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~ 88 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATA 88 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCS
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCc
Confidence 45679999999999999999999999999999872 455799999999999999999999999999999999999987
Q ss_pred CC
Q 004002 267 KD 268 (780)
Q Consensus 267 k~ 268 (780)
+.
T Consensus 89 r~ 90 (93)
T d2cq3a1 89 RV 90 (93)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 37
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=7.1e-16 Score=134.00 Aligned_cols=79 Identities=24% Similarity=0.503 Sum_probs=72.8
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.++|||+|||.++++++|+++|++||.|..+.+ ++.++|||||+|.++++|++||+.|||..+.|++|+|+++.+
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~ 84 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEEC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 467999999999999999999999999999864 567899999999999999999999999999999999999988
Q ss_pred Cchh
Q 004002 352 GGAR 355 (780)
Q Consensus 352 k~~r 355 (780)
+..+
T Consensus 85 ~~~~ 88 (90)
T d1x5sa1 85 SSDN 88 (90)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 38
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.2e-15 Score=132.81 Aligned_cols=79 Identities=19% Similarity=0.436 Sum_probs=72.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~---tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
.+.++|||+|||.++|+++|+++|++||+|.+|+. ....+|||||+|.+.++|++|++.|+|..|.|++|+|.|+.+
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 45689999999999999999999999999999873 344689999999999999999999999999999999999986
Q ss_pred CC
Q 004002 267 KD 268 (780)
Q Consensus 267 k~ 268 (780)
+.
T Consensus 86 ~~ 87 (90)
T d2cqia1 86 PS 87 (90)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 39
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=7.5e-16 Score=131.12 Aligned_cols=72 Identities=17% Similarity=0.364 Sum_probs=68.5
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 194 TLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 194 tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
.|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|+|..+.|++|+|.|+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 699999999999999999999999999988 358899999999999999999999999999999999999985
No 40
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.59 E-value=1.4e-15 Score=130.81 Aligned_cols=74 Identities=24% Similarity=0.455 Sum_probs=68.6
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccc--ccccccc
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHF 263 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~g--r~I~V~~ 263 (780)
..++|||+|||+++++++|+++|++||+|..++ .+++++|||||+|.+.++|++|++.|+|..+.| ++|+|+|
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 457899999999999999999999999999987 358899999999999999999999999999976 8899988
Q ss_pred C
Q 004002 264 S 264 (780)
Q Consensus 264 a 264 (780)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 41
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=2.1e-15 Score=133.40 Aligned_cols=79 Identities=28% Similarity=0.415 Sum_probs=73.0
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
..++|||+|||.++++++|+++|++||.|.+|++ ++.++|||||+|.+.++|++||+.|||..+.|+.|+|.+++
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~ 86 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 86 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECC
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3567999999999999999999999999999986 56778999999999999999999999999999999999999
Q ss_pred CCch
Q 004002 351 PGGA 354 (780)
Q Consensus 351 ~k~~ 354 (780)
++..
T Consensus 87 ~~~~ 90 (99)
T d1whwa_ 87 IKKE 90 (99)
T ss_dssp CCST
T ss_pred CCCc
Confidence 8653
No 42
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1e-15 Score=131.90 Aligned_cols=75 Identities=17% Similarity=0.402 Sum_probs=70.9
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
+|||+|||..+|+++|+++|++||+|++|++ ++.++|||||+|.+.++|++|++.|||..+.|++|+|++|.++.
T Consensus 3 rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~ 82 (85)
T d2u2fa_ 3 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 82 (85)
T ss_dssp CEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 6999999999999999999999999999975 57789999999999999999999999999999999999998764
No 43
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.59 E-value=8e-16 Score=131.03 Aligned_cols=74 Identities=22% Similarity=0.287 Sum_probs=66.5
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
++|||+|||.++|+++|+++|++||.|..+.+ .+.++|||||+|.+.++|++|++.|||..+.|++|+|++++|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 58999999999999999999999999987653 567889999999999999999999999999999999999987
No 44
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=1.8e-15 Score=133.00 Aligned_cols=81 Identities=21% Similarity=0.469 Sum_probs=72.4
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHcc------Ccccccc
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQ------NKPLRRR 257 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Ln------g~~l~gr 257 (780)
....++|||+|||+++|+++|+++|++||+|.+++ .+++++|||||+|.+.++|++|++.|+ |..+.|+
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 34568999999999999999999999999999887 356789999999999999999999886 5678899
Q ss_pred ccccccCCCCCC
Q 004002 258 KLDIHFSIPKDN 269 (780)
Q Consensus 258 ~I~V~~a~pk~~ 269 (780)
+|+|.|+.++.+
T Consensus 85 ~l~v~~a~~k~~ 96 (98)
T d1x4ha1 85 QLKVDLAVTRDE 96 (98)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEEEECCCCCc
Confidence 999999987654
No 45
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.59 E-value=6.1e-16 Score=136.28 Aligned_cols=80 Identities=23% Similarity=0.397 Sum_probs=75.7
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 269 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~~ 269 (780)
.+.++|||+|||+++|+++|+++|++||.|..++.+++++|||||+|.+.++|++|++.|++..|.|++|.|.|+.++..
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~ 93 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGG 93 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCC
Confidence 45689999999999999999999999999998888999999999999999999999999999999999999999988754
No 46
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.58 E-value=1.8e-15 Score=130.09 Aligned_cols=75 Identities=24% Similarity=0.434 Sum_probs=68.8
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCC--ceEEEE
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG--KRIKLE 347 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~G--r~L~V~ 347 (780)
...++|||+|||.++++++|+++|++||.|..+++ +++++|||||+|.+.++|++||+.|||..+.| ++|+|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 34568999999999999999999999999999975 46788999999999999999999999999977 889999
Q ss_pred ec
Q 004002 348 PS 349 (780)
Q Consensus 348 ~a 349 (780)
+|
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 47
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.8e-15 Score=133.24 Aligned_cols=78 Identities=13% Similarity=0.263 Sum_probs=71.6
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
+...++|||+|||+++|+++|+++|++||+|..++ .+++++|||||+|.+.++|++|++.|||..|.|+++.|.++
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 34568999999999999999999999999998876 36788999999999999999999999999999999999887
Q ss_pred CC
Q 004002 265 IP 266 (780)
Q Consensus 265 ~p 266 (780)
.|
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 48
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.6e-15 Score=130.59 Aligned_cols=74 Identities=30% Similarity=0.425 Sum_probs=67.9
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCC--ceEEEEe
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG--KRIKLEP 348 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~G--r~L~V~~ 348 (780)
+.++|||+|||.++|+++|+++|++||.|+++++ ++.++|||||+|.+.++|++|++.|||..+.| ++|+|+|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 4568999999999999999999999999999975 46788999999999999999999999999998 5699988
Q ss_pred c
Q 004002 349 S 349 (780)
Q Consensus 349 a 349 (780)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 49
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=7.8e-16 Score=133.67 Aligned_cols=78 Identities=17% Similarity=0.360 Sum_probs=71.7
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~---tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
..+|||+|||+++|+++|+++|++||+|..++. .+.++|||||+|.+.++|++|++.|+|..|.|++|.|.++.+++
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 468999999999999999999999999999873 45578999999999999999999999999999999999998765
Q ss_pred C
Q 004002 269 N 269 (780)
Q Consensus 269 ~ 269 (780)
+
T Consensus 88 ~ 88 (89)
T d1cvja2 88 E 88 (89)
T ss_dssp T
T ss_pred C
Confidence 3
No 50
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.7e-16 Score=139.56 Aligned_cols=79 Identities=24% Similarity=0.450 Sum_probs=72.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...++|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.|++..|.|++|+|.|+
T Consensus 6 ~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a 85 (104)
T d1p1ta_ 6 RSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNA 85 (104)
T ss_dssp HHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEET
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3457999999999999999999999999999887 36889999999999999999999999999999999999998
Q ss_pred CCCC
Q 004002 265 IPKD 268 (780)
Q Consensus 265 ~pk~ 268 (780)
.++.
T Consensus 86 ~~~~ 89 (104)
T d1p1ta_ 86 ASEK 89 (104)
T ss_dssp TCTT
T ss_pred CCCC
Confidence 7643
No 51
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=8.9e-16 Score=132.30 Aligned_cols=78 Identities=21% Similarity=0.323 Sum_probs=72.0
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNP 270 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~~~ 270 (780)
.++|||+|||+++|+++|+++|++||.|..++. ++++|||||+|.+.++|++|++.|+|..|.|++|.|+|++|++..
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~-~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~~ 85 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDKD 85 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEE-ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCCC
Confidence 479999999999999999999999999877653 678999999999999999999999999999999999999987643
No 52
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.6e-15 Score=130.61 Aligned_cols=73 Identities=25% Similarity=0.412 Sum_probs=67.1
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccc--cccccccC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHFS 264 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~g--r~I~V~~a 264 (780)
.++|||+|||+++|+++|+++|++||+|.+++ .+++++|||||+|.+.++|++|++.|+|..+.| ++|.|.||
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 47899999999999999999999999999987 257899999999999999999999999999987 45888875
No 53
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.58 E-value=1.6e-15 Score=142.29 Aligned_cols=78 Identities=28% Similarity=0.457 Sum_probs=72.3
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.|||..|.|++|+|+++++
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~ 121 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAAS 121 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 357999999999999999999999999999875 467899999999999999999999999999999999999987
Q ss_pred Cch
Q 004002 352 GGA 354 (780)
Q Consensus 352 k~~ 354 (780)
+..
T Consensus 122 ~~~ 124 (139)
T d1u6fa1 122 GHQ 124 (139)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 54
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.6e-15 Score=131.92 Aligned_cols=78 Identities=18% Similarity=0.349 Sum_probs=72.2
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe--CCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~--tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk 267 (780)
.++++|||+|||+++|+++|+++|++||.|..++. ...++|||||+|.+.++|++||+.|++..|.|++|+|+|+++.
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 45689999999999999999999999999998873 5678999999999999999999999999999999999998764
No 55
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.58 E-value=2.7e-15 Score=128.52 Aligned_cols=77 Identities=18% Similarity=0.349 Sum_probs=71.2
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccc-cccccccccCC
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL-RRRKLDIHFSI 265 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l-~gr~I~V~~a~ 265 (780)
..|+++|||+|||.++|+++|+++|++||+|.+|+.....+|||||+|.+.++|++|++.|+|..| .|++|+|.||+
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 346799999999999999999999999999999987667789999999999999999999999988 46899999985
No 56
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=1.2e-15 Score=129.16 Aligned_cols=72 Identities=22% Similarity=0.442 Sum_probs=68.5
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 194 TLFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 194 tLfVgNLp~~vteeeLr~lF~~yG~I~sv~----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
+|||+|||+++++++|+++|++||.|.+++ .+++++|||||+|.+.++|++|++.|+|..+.|++|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 699999999999999999999999999998 368899999999999999999999999999999999999874
No 57
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.6e-15 Score=129.82 Aligned_cols=72 Identities=22% Similarity=0.447 Sum_probs=67.2
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCcccccccccc
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDI 261 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V 261 (780)
.++++|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|+++|+|..|.|++|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4568999999999999999999999999999887 35889999999999999999999999999999999876
No 58
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=2.3e-15 Score=131.26 Aligned_cols=78 Identities=14% Similarity=0.325 Sum_probs=70.4
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...++|||+|||+++|+++|+++|++||+|.+|+ .++++||||||+|.+.++|++||+. ...|.|+.|.|+++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeC
Confidence 3568999999999999999999999999999987 3689999999999999999999995 44789999999999
Q ss_pred CCCCC
Q 004002 265 IPKDN 269 (780)
Q Consensus 265 ~pk~~ 269 (780)
.++..
T Consensus 84 ~~k~~ 88 (90)
T d2cqga1 84 NSKQS 88 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87653
No 59
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=2.4e-15 Score=130.14 Aligned_cols=76 Identities=29% Similarity=0.442 Sum_probs=70.3
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-eCCCcceEEEEEEecHHHHHHHHHHccCccc-cccccccccCCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-TACKHRGFVMISYYDIRAARTAMRALQNKPL-RRRKLDIHFSIP 266 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l-~gr~I~V~~a~p 266 (780)
|+++|||+|||.++|+++|+++|++||.|..++ ..++.+|||||+|.+.++|.+|+..|+|..| .|++|+|.|+++
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~ 86 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 86 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCC
Confidence 678999999999999999999999999998765 5677899999999999999999999999988 589999999875
No 60
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=1.7e-15 Score=130.16 Aligned_cols=74 Identities=24% Similarity=0.397 Sum_probs=67.6
Q ss_pred eeecCCCCCCChhHHHHHhcccCCeeEEEeC-----C---CcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRET-----P---HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 280 L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~-----g---~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
|||+|||.++|+++|+++|++||.|++|++. + .++|||||+|.+.++|++|++.|||..+.|+.|+|+++++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999998751 1 3579999999999999999999999999999999999976
Q ss_pred Cc
Q 004002 352 GG 353 (780)
Q Consensus 352 k~ 353 (780)
+.
T Consensus 81 ~~ 82 (85)
T d2cpfa1 81 AT 82 (85)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 61
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.3e-15 Score=133.31 Aligned_cols=79 Identities=24% Similarity=0.386 Sum_probs=71.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...++|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++.+++ .|.|++|.|.++
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a 86 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLA 86 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEES
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEc
Confidence 3457899999999999999999999999999998 3578999999999999999999998875 799999999998
Q ss_pred CCCCC
Q 004002 265 IPKDN 269 (780)
Q Consensus 265 ~pk~~ 269 (780)
.++..
T Consensus 87 ~~~~~ 91 (103)
T d2cqda1 87 YLGAK 91 (103)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 76544
No 62
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2e-15 Score=134.63 Aligned_cols=78 Identities=23% Similarity=0.391 Sum_probs=72.3
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.++|||+|||.++++++|+++|++||+|..|++ ++.++|||||+|.+.++|++|++.|||..+.|++|+|.++.+
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 468999999999999999999999999999875 566789999999999999999999999999999999999987
Q ss_pred Cch
Q 004002 352 GGA 354 (780)
Q Consensus 352 k~~ 354 (780)
+..
T Consensus 88 ~~~ 90 (104)
T d1p1ta_ 88 EKN 90 (104)
T ss_dssp TTH
T ss_pred CCC
Confidence 653
No 63
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=1.8e-15 Score=136.13 Aligned_cols=77 Identities=13% Similarity=0.268 Sum_probs=71.5
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk 267 (780)
+.+++|||+|||+++++++|+++|++||+|..|.+ .+.+|||||+|.+.++|++|++.|||..|.|++|.|.|+...
T Consensus 8 r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l-~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 8 RSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLL-PEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp EEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEEC-CSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEe-eccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 35589999999999999999999999999999975 578999999999999999999999999999999999998654
No 64
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.5e-15 Score=129.84 Aligned_cols=75 Identities=23% Similarity=0.401 Sum_probs=68.6
Q ss_pred eeecCCCCCCChhHHHHHhcccCCeeEE-Ee-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEI-RE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 280 L~V~NLp~~vteedL~~~Fs~yG~I~~v-~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
|||+|||.++|+++|+++|++||.|..+ ++ +++++|||||+|.+.++|++||+.|||..+.|++|+|.++.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998654 33 56778999999999999999999999999999999999999875
Q ss_pred h
Q 004002 354 A 354 (780)
Q Consensus 354 ~ 354 (780)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 4
No 65
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.1e-15 Score=133.50 Aligned_cols=80 Identities=28% Similarity=0.358 Sum_probs=71.9
Q ss_pred CCCCccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEE
Q 004002 273 KDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347 (780)
Q Consensus 273 ~~~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~ 347 (780)
++...++|||+|||..+++++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.+|+ .+.|++|+|+
T Consensus 6 ~d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~ 84 (103)
T d2cqda1 6 KDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVN 84 (103)
T ss_dssp CSCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEE
T ss_pred CCCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEE
Confidence 4445568999999999999999999999999999986 467899999999999999999999886 7999999999
Q ss_pred ecCCCc
Q 004002 348 PSRPGG 353 (780)
Q Consensus 348 ~a~~k~ 353 (780)
++..+.
T Consensus 85 ~a~~~~ 90 (103)
T d2cqda1 85 LAYLGA 90 (103)
T ss_dssp ESTTTC
T ss_pred EcCCCC
Confidence 998654
No 66
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.9e-15 Score=132.05 Aligned_cols=76 Identities=24% Similarity=0.389 Sum_probs=71.2
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
..+|||+|||.++++++|+++|++||.|++|++.. .+|||||+|++.++|++||..|||..|.|+.|+|.|++++.
T Consensus 18 ~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~-~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p 93 (96)
T d1x4ga1 18 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFP-EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 93 (96)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEe-cceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 46899999999999999999999999999999864 48999999999999999999999999999999999998754
No 67
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=8.4e-16 Score=131.49 Aligned_cols=75 Identities=20% Similarity=0.481 Sum_probs=68.6
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEE-E-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 195 LFVRNINSNVEDSELRALFEQYGDIRTL-Y-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 195 LfVgNLp~~vteeeLr~lF~~yG~I~sv-~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
|||+|||+++|+++|+++|++||.|..+ + .+++++|||||+|.+.++|++|++.|+|..+.|++|+|.|+.+++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998553 2 357899999999999999999999999999999999999998765
Q ss_pred C
Q 004002 269 N 269 (780)
Q Consensus 269 ~ 269 (780)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 3
No 68
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.8e-15 Score=127.41 Aligned_cols=71 Identities=28% Similarity=0.518 Sum_probs=66.3
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEE
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V 346 (780)
..++|||+|||.++|+++|+++|++||.|++|++ +++++|||||+|.+.++|++|++.|||..+.|++|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4578999999999999999999999999999875 4677899999999999999999999999999999987
No 69
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.1e-15 Score=136.06 Aligned_cols=77 Identities=21% Similarity=0.440 Sum_probs=70.4
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
..++|||+|||.++++++|+++|+.||+|++|++ +++++|||||+|.+.++|++|+. |||..+.|+.|+|.+++
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 4468999999999999999999999999999976 57789999999999999999995 99999999999999986
Q ss_pred CCc
Q 004002 351 PGG 353 (780)
Q Consensus 351 ~k~ 353 (780)
++.
T Consensus 96 ~~~ 98 (101)
T d2cq4a1 96 AEK 98 (101)
T ss_dssp HHH
T ss_pred CCC
Confidence 543
No 70
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=5.2e-15 Score=129.93 Aligned_cols=77 Identities=31% Similarity=0.508 Sum_probs=71.1
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe--CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE--TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~--~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k 352 (780)
..++|||+|||.++|+++|+++|++||.|+.+++ +...++||||+|.+.++|++||+.|||+.+.|++|+|+++++.
T Consensus 13 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 13 NDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp CSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 3457999999999999999999999999999876 4567899999999999999999999999999999999999875
No 71
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.55 E-value=2.5e-15 Score=129.64 Aligned_cols=76 Identities=22% Similarity=0.390 Sum_probs=67.4
Q ss_pred CccceeecCCCCCCCh-hHHHHHhcccCCeeEEEe------CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEe
Q 004002 276 NQGTLVVFNLDPSVSN-EDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEP 348 (780)
Q Consensus 276 ~~~~L~V~NLp~~vte-edL~~~Fs~yG~I~~v~~------~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~ 348 (780)
..++|||+|||.++++ ++|+++|++||.|+.|++ +++++|||||+|.+.++|++||+ |||..+.|+.|+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 3568999999999865 569999999999999975 45678999999999999999995 999999999999999
Q ss_pred cCCC
Q 004002 349 SRPG 352 (780)
Q Consensus 349 a~~k 352 (780)
++++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 72
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4e-15 Score=131.71 Aligned_cols=75 Identities=21% Similarity=0.363 Sum_probs=68.6
Q ss_pred CccceeecCCC-CCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 276 NQGTLVVFNLD-PSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 276 ~~~~L~V~NLp-~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
...+|||+||| ..+++++|+++|++||.|+.|++ ++|||||+|++.++|++||+.|||+.+.|++|+|++++++.
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 34679999997 56788999999999999999998 48999999999999999999999999999999999997653
No 73
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.3e-15 Score=133.27 Aligned_cols=82 Identities=22% Similarity=0.364 Sum_probs=72.5
Q ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEE--------E-----eCCCcceEEEEEEecHHHHHHHHHHccCccc
Q 004002 188 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTL--------Y-----TACKHRGFVMISYYDIRAARTAMRALQNKPL 254 (780)
Q Consensus 188 ~e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv--------~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l 254 (780)
.+...++|||+|||.++|+++|+++|++||.|..+ . .+++++|||||+|.+.++|++|++.|+|..|
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 34467899999999999999999999999988543 2 2478899999999999999999999999999
Q ss_pred cccccccccCCCCCC
Q 004002 255 RRRKLDIHFSIPKDN 269 (780)
Q Consensus 255 ~gr~I~V~~a~pk~~ 269 (780)
.|++|+|+++.++..
T Consensus 84 ~gr~i~V~~a~~~~p 98 (101)
T d2cpea1 84 QGSKLKVSLARKKPP 98 (101)
T ss_dssp TTEECEEECSSCCCC
T ss_pred CCEEEEEEEcCCCCC
Confidence 999999999987543
No 74
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.55 E-value=1.8e-15 Score=130.63 Aligned_cols=76 Identities=18% Similarity=0.396 Sum_probs=67.4
Q ss_pred CCcEEEEeCCCCCCC-HHHHHHHhhcCCCEEEEE------eCCCcceEEEEEEecHHHHHHHHHHccCcccccccccccc
Q 004002 191 PSRTLFVRNINSNVE-DSELRALFEQYGDIRTLY------TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (780)
Q Consensus 191 ~s~tLfVgNLp~~vt-eeeLr~lF~~yG~I~sv~------~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~ 263 (780)
..++|||+|||+++| +++|+++|++||+|.+|+ .+++++|||||+|.+.++|++|++ |++..|.|++|.|.+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 458999999999986 566999999999999997 257889999999999999999996 999999999999999
Q ss_pred CCCC
Q 004002 264 SIPK 267 (780)
Q Consensus 264 a~pk 267 (780)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9865
No 75
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.9e-15 Score=131.68 Aligned_cols=79 Identities=23% Similarity=0.593 Sum_probs=71.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHH----HhhcCCCEEEEEe--CCCcceEEEEEEecHHHHHHHHHHccCcccccccccccc
Q 004002 190 HPSRTLFVRNINSNVEDSELRA----LFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~----lF~~yG~I~sv~~--tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~ 263 (780)
+|+++|||+|||++++++||++ +|++||+|.+|+. +++++|||||+|.+.++|.+|++.|+|..+.|++|.|.|
T Consensus 1 ~P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ 80 (91)
T d1nu4a_ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQY 80 (91)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 3679999999999999999864 6899999999983 467899999999999999999999999999999999999
Q ss_pred CCCCC
Q 004002 264 SIPKD 268 (780)
Q Consensus 264 a~pk~ 268 (780)
+.++.
T Consensus 81 ak~~~ 85 (91)
T d1nu4a_ 81 AKTDS 85 (91)
T ss_dssp CSSCC
T ss_pred eCCCc
Confidence 98654
No 76
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.2e-15 Score=132.22 Aligned_cols=79 Identities=24% Similarity=0.459 Sum_probs=73.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 269 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~~ 269 (780)
..+++|||+|||+++|+++|+++|++||+|.+|+...+++|||||+|.+.++|++|+. ++..|.|++|.|.++.++..
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 4578999999999999999999999999999999888899999999999999999996 78899999999999987664
Q ss_pred C
Q 004002 270 P 270 (780)
Q Consensus 270 ~ 270 (780)
.
T Consensus 81 ~ 81 (88)
T d1wf0a_ 81 S 81 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 77
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=9.7e-16 Score=136.04 Aligned_cols=81 Identities=21% Similarity=0.397 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
.++++|||+|||.++++++|+++|++||.|..++ .+++++|||||+|.+.++|++|++.|+|..|.|++|.|.|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 4678999999999999999999999999876653 46899999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 004002 265 IPKDNP 270 (780)
Q Consensus 265 ~pk~~~ 270 (780)
.+++.+
T Consensus 96 k~k~~r 101 (102)
T d2cpxa1 96 KNKKQR 101 (102)
T ss_dssp CCCSCC
T ss_pred CCcccC
Confidence 887643
No 78
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.3e-15 Score=127.92 Aligned_cols=76 Identities=26% Similarity=0.269 Sum_probs=71.0
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
.++|||+|||.++++++|+++|++||.|..+++ +.++|||||+|.++++|.+|+..|||..+.|++|+|.+++|+.
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~-~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~ 83 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVD 83 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEE-ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCC
Confidence 468999999999999999999999999988776 4578999999999999999999999999999999999999875
No 79
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=9.7e-16 Score=130.53 Aligned_cols=76 Identities=28% Similarity=0.367 Sum_probs=69.5
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCC-ccCCceEEEEecCCCchh
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRS-DIAGKRIKLEPSRPGGAR 355 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~-~i~Gr~L~V~~a~~k~~r 355 (780)
+|||+|||.++|+++|+++|++||.|..+++. .++|||||+|.+.++|++|++.|||. .+.|++|+|+++.++.++
T Consensus 3 ~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~-~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 3 KLYIGNLSPAVTADDLRQLFGDRKLPLAGQVL-LKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHTTCCCSSCEE-EETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCcEEEeEEe-cccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 69999999999999999999999999876653 46899999999999999999999996 699999999999997654
No 80
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=6.9e-16 Score=131.49 Aligned_cols=77 Identities=22% Similarity=0.359 Sum_probs=69.2
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCc-cccccccccccCCCCCCC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK-PLRRRKLDIHFSIPKDNP 270 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~-~l~gr~I~V~~a~pk~~~ 270 (780)
.+|||+|||.++|+++|+++|++||.|.+++ ..+.+|||||+|.+.++|++|++.|+|. .+.|++|+|+|+.|+..+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~-~~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQ-VLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSC-EEEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeE-EecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 4799999999999999999999999987654 3467899999999999999999999996 599999999999987643
No 81
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4e-15 Score=130.83 Aligned_cols=82 Identities=21% Similarity=0.336 Sum_probs=71.8
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCC-EEEEEe------CCCcceEEEEEEecHHHHHHHHHHccC--ccccccccccc
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGD-IRTLYT------ACKHRGFVMISYYDIRAARTAMRALQN--KPLRRRKLDIH 262 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~-I~sv~~------tgkskG~aFV~F~~~e~A~~Al~~Lng--~~l~gr~I~V~ 262 (780)
+++|||+|||.++|+++|+++|++||+ |..++. +++++|||||+|.+.++|.+|++.|++ ..+.|++|.|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 378999999999999999999999996 888872 478999999999999999999999965 45579999999
Q ss_pred cCCCCCCCCCC
Q 004002 263 FSIPKDNPSDK 273 (780)
Q Consensus 263 ~a~pk~~~s~~ 273 (780)
||.|+..+.++
T Consensus 81 ~A~p~~~~~~~ 91 (96)
T d2disa1 81 WAEPEIDVDED 91 (96)
T ss_dssp ESCSSCSTTTC
T ss_pred EcCCCCCCChH
Confidence 99987766543
No 82
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=3.8e-15 Score=128.58 Aligned_cols=76 Identities=25% Similarity=0.425 Sum_probs=71.0
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
..+|||+|||.++++++|+++|++||.|.+|++. +.++||||+|++.++|++|++.|||..+.|++|+|++|.++.
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~-~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-KDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEE-TTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeee-cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 3579999999999999999999999999999985 457999999999999999999999999999999999998764
No 83
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.3e-15 Score=133.25 Aligned_cols=76 Identities=29% Similarity=0.522 Sum_probs=70.7
Q ss_pred ccceeecCCCC-CCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 004002 277 QGTLVVFNLDP-SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (780)
Q Consensus 277 ~~~L~V~NLp~-~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k 352 (780)
..+|||+|||+ .+|+++|+++|++||.|+.|++...++|+|||+|+++++|++||+.|||..+.|+.|+|++++..
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~ 78 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQ 78 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 35899999965 59999999999999999999988778999999999999999999999999999999999998754
No 84
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=6.5e-15 Score=127.33 Aligned_cols=77 Identities=29% Similarity=0.371 Sum_probs=69.9
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEE-eCCCcccEEEEEEcCHHHHHHHHHHhCCCcc-CCceEEEEecCCC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-ETPHKRHHKFIEFYDVRAAEAALKSLNRSDI-AGKRIKLEPSRPG 352 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~-~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i-~Gr~L~V~~a~~k 352 (780)
+.++|||+|||.++++++|+++|++||.|..++ ..++.+++|||+|.+.++|.+|+..|||..+ +|+.|+|+++++.
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 356899999999999999999999999998765 4667789999999999999999999999988 5899999999864
No 85
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.7e-15 Score=131.59 Aligned_cols=77 Identities=25% Similarity=0.380 Sum_probs=70.9
Q ss_pred CcEEEEeCCCC-CCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 192 SRTLFVRNINS-NVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 192 s~tLfVgNLp~-~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
+++|||+|||+ .+|+++|+++|++||+|..|++....+|||||+|.+.++|++|++.|+|..|.|+.|+|.|+....
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 57999999965 599999999999999999999766679999999999999999999999999999999999986543
No 86
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=4.5e-15 Score=133.48 Aligned_cols=77 Identities=18% Similarity=0.282 Sum_probs=71.2
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
..++|||+|||.++++++|+++|++||+|+.|.+ +..+|||||+|.+.++|++||+.|||..|.|++|+|+++....
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l-~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLL-PEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEEC-CSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEe-eccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 3468999999999999999999999999999998 4678999999999999999999999999999999999986543
No 87
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.5e-15 Score=130.26 Aligned_cols=77 Identities=14% Similarity=0.325 Sum_probs=71.1
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
..++|||+|||.++++++|+++|++||+|.+|+. .+.||||||+|.+.++|++|++.|+|..|.|++|+|.|++++.
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i-~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p 93 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV-FPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 93 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEE-ETTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEE-EecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 3579999999999999999999999999999985 3569999999999999999999999999999999999997643
No 88
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.3e-15 Score=133.50 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=71.1
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.++|||+|||.++++++|+++|++||.|..+++ ++.++|||||+|.+.++|++||+ ++|..|.|+.|.|.+|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 368999999999999999999999999999976 45789999999999999999996 799999999999999998
Q ss_pred Cch
Q 004002 352 GGA 354 (780)
Q Consensus 352 k~~ 354 (780)
+.+
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 89
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.9e-15 Score=124.02 Aligned_cols=70 Identities=14% Similarity=0.389 Sum_probs=65.3
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 194 TLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 194 tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
+|||+|||+++|+++|+++|++||+|..++ .+++++|||||+|.+.++|++|++ +++..|.|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 589999999999999999999999999998 368899999999999999999998 7999999999999754
No 90
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=4.4e-15 Score=126.04 Aligned_cols=74 Identities=22% Similarity=0.424 Sum_probs=68.7
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
.++|||+|++ +|+++|+++|++||.|.+|++. +.++||||+|.+.++|.+|++.|||..+.|++|+|.+++++.
T Consensus 5 ~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~-~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 5 GNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMD-PPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp CCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEE-TTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred CCEEEEECCC--CCHHHHHHHHhccCccceeeec-cCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 4689999996 9999999999999999999985 567999999999999999999999999999999999998753
No 91
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=4.5e-15 Score=131.31 Aligned_cols=81 Identities=26% Similarity=0.383 Sum_probs=71.8
Q ss_pred CCCccceeecCCCCCCChhHHHHHhcccCCeeEEE-------------eCCCcccEEEEEEcCHHHHHHHHHHhCCCccC
Q 004002 274 DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-------------ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIA 340 (780)
Q Consensus 274 ~~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~-------------~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~ 340 (780)
+....+|||+|||..+|+++|+++|+.||.|..+. .+++++|||||+|.++++|++||+.|||..+.
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 84 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ 84 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC
Confidence 34567999999999999999999999999986432 14677899999999999999999999999999
Q ss_pred CceEEEEecCCCch
Q 004002 341 GKRIKLEPSRPGGA 354 (780)
Q Consensus 341 Gr~L~V~~a~~k~~ 354 (780)
|++|+|++++++..
T Consensus 85 gr~i~V~~a~~~~p 98 (101)
T d2cpea1 85 GSKLKVSLARKKPP 98 (101)
T ss_dssp TEECEEECSSCCCC
T ss_pred CEEEEEEEcCCCCC
Confidence 99999999998654
No 92
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7.4e-15 Score=127.94 Aligned_cols=77 Identities=21% Similarity=0.391 Sum_probs=69.6
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
...+|||+|||.++|+++|+++|++||.|..|++ ++.++|||||+|.+.++|++||+. ...++|+.|.|+++.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCC
Confidence 3468999999999999999999999999999975 578899999999999999999985 458999999999998
Q ss_pred CCch
Q 004002 351 PGGA 354 (780)
Q Consensus 351 ~k~~ 354 (780)
++..
T Consensus 85 ~k~~ 88 (90)
T d2cqga1 85 SKQS 88 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 8653
No 93
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=6.6e-15 Score=126.51 Aligned_cols=74 Identities=23% Similarity=0.450 Sum_probs=68.2
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
..++|||+|||+++|+++|+++|++||+|..++ .+++++|||||+|.+.++|++|++ +++..|.|+.|+|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 347999999999999999999999999999987 368899999999999999999998 69999999999998774
No 94
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=5.7e-15 Score=131.19 Aligned_cols=77 Identities=21% Similarity=0.278 Sum_probs=70.1
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
..++|||+|||.++++++|+++|++||.|+.+++ ++.++|||||+|.+.++|++||+.|||+.|.|+++.|.+++|
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 3468999999999999999999999999988864 556789999999999999999999999999999999988876
Q ss_pred C
Q 004002 352 G 352 (780)
Q Consensus 352 k 352 (780)
-
T Consensus 97 l 97 (101)
T d1x5oa1 97 L 97 (101)
T ss_dssp B
T ss_pred c
Confidence 3
No 95
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=5.2e-15 Score=127.73 Aligned_cols=76 Identities=32% Similarity=0.564 Sum_probs=70.8
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
.++|||+|||.++++++|+++|++||+|.+|+. .+.+|||||+|.+.++|++|++.|+|..|.|++|+|+||.++.
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~-~~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI-HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEE-ETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeee-ecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 468999999999999999999999999999985 3578999999999999999999999999999999999998654
No 96
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.6e-15 Score=130.15 Aligned_cols=77 Identities=19% Similarity=0.333 Sum_probs=71.7
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCch
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 354 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~~ 354 (780)
..++|||+|||.++|+++|+++|++||.|.+|++...+++||||+|++.++|++||. ++..|.|++|+|++++++..
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 356899999999999999999999999999999988899999999999999999995 88899999999999987653
No 97
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.4e-14 Score=127.27 Aligned_cols=78 Identities=22% Similarity=0.391 Sum_probs=70.7
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhC------CCccCCceEE
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLN------RSDIAGKRIK 345 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~Ln------G~~i~Gr~L~ 345 (780)
.++|||+|||.++|+++|+++|++||.|.++++ ++.++|||||+|.+.++|.+||+.|| |..+.|++|+
T Consensus 8 ~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~ 87 (98)
T d1x4ha1 8 GKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLK 87 (98)
T ss_dssp CCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEE
Confidence 468999999999999999999999999999875 45678999999999999999999987 6678999999
Q ss_pred EEecCCCch
Q 004002 346 LEPSRPGGA 354 (780)
Q Consensus 346 V~~a~~k~~ 354 (780)
|.++.++.+
T Consensus 88 v~~a~~k~~ 96 (98)
T d1x4ha1 88 VDLAVTRDE 96 (98)
T ss_dssp EECCCCCCC
T ss_pred EEECCCCCc
Confidence 999988753
No 98
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.8e-15 Score=133.06 Aligned_cols=77 Identities=18% Similarity=0.436 Sum_probs=71.0
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~-----tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
.++|||+|||+++|+++|+++|++||+|..+++ +++++|||||+|.+.++|++|++ +++..|.|++|.|+++.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 379999999999999999999999999999873 57899999999999999999997 799999999999999988
Q ss_pred CCC
Q 004002 267 KDN 269 (780)
Q Consensus 267 k~~ 269 (780)
++.
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 99
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7.4e-15 Score=124.21 Aligned_cols=72 Identities=24% Similarity=0.482 Sum_probs=66.8
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
.++|||+|||+++|+++|+++|++||.|..++ .+++++|||||+|.+.++|++|++ ++|..|.|++|.|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 37999999999999999999999999999887 367899999999999999999996 8999999999999876
No 100
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=2.1e-15 Score=127.58 Aligned_cols=71 Identities=17% Similarity=0.422 Sum_probs=66.3
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
|+|||+|||+++|+++|+++|++||+|.+++ .++++||||||+|.+.++|++|++ +++..|.|++|.|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 6899999999999999999999999998876 368899999999999999999998 7999999999999875
No 101
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.4e-14 Score=124.38 Aligned_cols=73 Identities=19% Similarity=0.340 Sum_probs=67.9
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
.++|||+|||.++|+++|+++|++||.|..+++ ++.++|||||+|.+.++|++||+ +++..|.|++|+|+.|.
T Consensus 6 ~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 468999999999999999999999999999875 57889999999999999999997 69999999999998875
No 102
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1e-14 Score=122.51 Aligned_cols=70 Identities=20% Similarity=0.371 Sum_probs=64.9
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
.|||+|||.++|+++|+++|++||.|..|++ +++++|||||+|.+.++|++||+ +++..+.|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999999999975 56789999999999999999997 7999999999999754
No 103
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=1.5e-14 Score=121.66 Aligned_cols=72 Identities=15% Similarity=0.335 Sum_probs=65.9
Q ss_pred eeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 280 L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
|||+|||.++++++|+++|++|| ++.+++ ++++|+|||+|.+.++|++|++.|||..+.|++|+|++++...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~-~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV-DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE-ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee-cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 555555 4678999999999999999999999999999999999997653
No 104
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=7.2e-15 Score=127.98 Aligned_cols=79 Identities=22% Similarity=0.432 Sum_probs=71.2
Q ss_pred ccceeecCCCCCCChhHHHH----HhcccCCeeEEEeC--CCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQ----IFGAYGEVKEIRET--PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~----~Fs~yG~I~~v~~~--g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
.++|||+|||.+++++||++ +|++||+|.+|++. ++++|||||+|.+.++|.+|++.|||..+.|+.|+|.+|+
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak 82 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAK 82 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 46899999999999999864 68999999999873 4568999999999999999999999999999999999999
Q ss_pred CCchh
Q 004002 351 PGGAR 355 (780)
Q Consensus 351 ~k~~r 355 (780)
++.+.
T Consensus 83 ~~~~~ 87 (91)
T d1nu4a_ 83 TDSDI 87 (91)
T ss_dssp SCCTH
T ss_pred CCchh
Confidence 87654
No 105
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2e-15 Score=134.46 Aligned_cols=75 Identities=17% Similarity=0.390 Sum_probs=69.6
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
..++|||+|||+++|+++|+++|+.||+|.+|+ .+++++|||||+|.+.++|++|++ |+|..|.|++|.|+++.
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 457999999999999999999999999999987 368899999999999999999996 99999999999999875
Q ss_pred C
Q 004002 266 P 266 (780)
Q Consensus 266 p 266 (780)
+
T Consensus 96 ~ 96 (101)
T d2cq4a1 96 A 96 (101)
T ss_dssp H
T ss_pred C
Confidence 4
No 106
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.2e-14 Score=128.46 Aligned_cols=76 Identities=28% Similarity=0.520 Sum_probs=69.1
Q ss_pred CCCcEEEEeCCC-CCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 190 HPSRTLFVRNIN-SNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 190 ~~s~tLfVgNLp-~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
...++|||+||| ..+++++|+++|++||+|.+|++ +||||||+|.+.++|++|++.|+|+.|.|++|+|.|+.++.
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 345789999997 57889999999999999999986 68999999999999999999999999999999999997643
No 107
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=6.7e-15 Score=127.58 Aligned_cols=75 Identities=13% Similarity=0.290 Sum_probs=66.6
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
..+|||+|||.+++++||+++|++|| ++.+.+ +..++||||+|.+.++|++||+.|||..+.|++|+|++++++.
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~-~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV-DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE-EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeee-eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 46899999999999999999999999 333333 4568999999999999999999999999999999999997654
No 108
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=7.3e-15 Score=124.66 Aligned_cols=75 Identities=20% Similarity=0.366 Sum_probs=69.1
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk 267 (780)
...++|||+||+ +|+++|+++|++||+|.+++. .+.+|||||+|.+.++|.+|+++|+|..+.|++|+|.|++++
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~-~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSM-DPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEE-ETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeee-ccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 346899999985 999999999999999999975 567899999999999999999999999999999999999765
No 109
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.1e-14 Score=130.90 Aligned_cols=80 Identities=21% Similarity=0.282 Sum_probs=71.2
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-CCCcceEEEEEEecHHHHHHHHHHccCccc--cccccccccCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRALQNKPL--RRRKLDIHFSIP 266 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~-tgkskG~aFV~F~~~e~A~~Al~~Lng~~l--~gr~I~V~~a~p 266 (780)
.+..+|||+|||+++|+++|+++|++||+|.+|+. ..+.+|||||+|.+.++|++|++.|+|..| .+++|+|.|+.+
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~ 84 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKL 84 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSS
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCC
Confidence 45688999999999999999999999999999873 346789999999999999999999999998 578899999877
Q ss_pred CCC
Q 004002 267 KDN 269 (780)
Q Consensus 267 k~~ 269 (780)
+..
T Consensus 85 ~~~ 87 (108)
T d2adba1 85 TSL 87 (108)
T ss_dssp CSC
T ss_pred ccc
Confidence 553
No 110
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=4.9e-15 Score=131.38 Aligned_cols=80 Identities=29% Similarity=0.343 Sum_probs=73.2
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
..++|||+|||.++++++|+++|++||.|..+.+ +++++|||||+|.+.++|++||+.|||..+.|++|+|++++
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 4568999999999999999999999999877643 67889999999999999999999999999999999999999
Q ss_pred CCchh
Q 004002 351 PGGAR 355 (780)
Q Consensus 351 ~k~~r 355 (780)
++.++
T Consensus 97 ~k~~r 101 (102)
T d2cpxa1 97 NKKQR 101 (102)
T ss_dssp CCSCC
T ss_pred CcccC
Confidence 87654
No 111
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=6.2e-15 Score=124.71 Aligned_cols=71 Identities=28% Similarity=0.443 Sum_probs=66.1
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
++|||+|||.++|+++|+++|++||.|+++++ ++++||||||+|.+.++|++||+ +|++.++|+.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 36999999999999999999999999998875 57789999999999999999997 7999999999999876
No 112
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.9e-14 Score=121.60 Aligned_cols=71 Identities=18% Similarity=0.359 Sum_probs=65.8
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
++|||+|||.++|+++|+++|++||.|..+++ ++.++|||||+|.+.++|++|++ |||+.|.|+.|+|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 58999999999999999999999999999875 56678999999999999999995 8999999999999876
No 113
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.50 E-value=3.3e-15 Score=130.40 Aligned_cols=76 Identities=24% Similarity=0.335 Sum_probs=69.6
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
...+|||+|||.++|+++|+++|++||.|..+++ +++++|||||+|.+.++|++||+ |||..+.|++|+|++|+.
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~ 90 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKG 90 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCC
Confidence 4568999999999999999999999999877654 67889999999999999999996 999999999999999986
Q ss_pred C
Q 004002 352 G 352 (780)
Q Consensus 352 k 352 (780)
+
T Consensus 91 k 91 (91)
T d1fjeb1 91 R 91 (91)
T ss_dssp S
T ss_pred C
Confidence 4
No 114
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.4e-14 Score=127.43 Aligned_cols=79 Identities=16% Similarity=0.389 Sum_probs=69.3
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE------eCCCcceEEEEEEecHHHHHHHHHHccCcccccccccccc
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY------TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~------~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~ 263 (780)
.+.++|||+|||+++|+++|+++|++|| |..++ .+++++|||||+|.+.++|++|++ |++..|.|++|+|.+
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 4668999999999999999999999999 55555 357789999999999999987775 999999999999999
Q ss_pred CCCCCCC
Q 004002 264 SIPKDNP 270 (780)
Q Consensus 264 a~pk~~~ 270 (780)
+.++...
T Consensus 91 a~~~~~~ 97 (104)
T d1wi8a_ 91 ADQAQDK 97 (104)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9876543
No 115
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.50 E-value=2.1e-15 Score=131.62 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
...++|||+|||+++|+++|+++|++||.|..++ .+++++|||||+|.+.++|++||+ |+|..|.|++|.|.++.
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 3557999999999999999999999999876654 468999999999999999999996 99999999999999987
Q ss_pred CC
Q 004002 266 PK 267 (780)
Q Consensus 266 pk 267 (780)
.+
T Consensus 90 ~k 91 (91)
T d1fjeb1 90 GR 91 (91)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 116
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=1.4e-14 Score=121.15 Aligned_cols=70 Identities=20% Similarity=0.340 Sum_probs=65.1
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
.|||+|||.++|+++|+++|++||.|..+.+ ++.++++|||+|.+.++|++|++ |||+.+.|++|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4899999999999999999999999999864 56778999999999999999996 9999999999999876
No 117
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=8.5e-15 Score=122.40 Aligned_cols=70 Identities=17% Similarity=0.419 Sum_probs=65.3
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 194 TLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 194 tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
+|||+|||+++|+++|+++|++||.|..+. .+++++|||||+|.+.++|++|++ ++|..|.|++|.|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 599999999999999999999999999886 357899999999999999999997 9999999999999875
No 118
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=7.1e-15 Score=127.41 Aligned_cols=76 Identities=14% Similarity=0.309 Sum_probs=67.5
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
.+++|||+|||++++++||+++|++||. ..+. .++++|||||+|.+.++|++|++.|++..|.|++|.|+|+.++.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~-~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL-KYCY-VDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC-CCEE-EEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc-eeee-eeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 4689999999999999999999999992 2232 36789999999999999999999999999999999999986543
No 119
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=9.1e-15 Score=123.10 Aligned_cols=70 Identities=19% Similarity=0.476 Sum_probs=64.7
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 194 TLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 194 tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
+|||+|||+++|+++|+++|++||+|.+|+ .+++++|||||+|.+.++|++||+ +++..|.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 699999999999999999999999999998 368899999999999999999997 5788899999998764
No 120
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=3.3e-14 Score=125.28 Aligned_cols=77 Identities=22% Similarity=0.409 Sum_probs=70.8
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCC--ceEEEEecCCCc
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG--KRIKLEPSRPGG 353 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~G--r~L~V~~a~~k~ 353 (780)
..++|||+|||.++++++|+++|++||.|+.|++. +.+++|||+|.+.++|++|++.|||..|.| ++|+|+|++++.
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~-~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~ 94 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHV-KGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGP 94 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEEC-SSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeee-ccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCC
Confidence 45789999999999999999999999999999985 457899999999999999999999999987 589999998764
No 121
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=3.2e-14 Score=125.30 Aligned_cols=78 Identities=28% Similarity=0.505 Sum_probs=70.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccc--cccccccCCCC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHFSIPK 267 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~g--r~I~V~~a~pk 267 (780)
.++++|||+|||+++++++|+++|++||+|..++. .+.++||||+|.+.++|++|++.|++..|.| ++|+|.|+++.
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~-~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~ 93 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDH-VKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSG 93 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEE-CSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEee-eccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCC
Confidence 46799999999999999999999999999999985 4568999999999999999999999999976 57999998764
Q ss_pred C
Q 004002 268 D 268 (780)
Q Consensus 268 ~ 268 (780)
.
T Consensus 94 ~ 94 (97)
T d1whya_ 94 P 94 (97)
T ss_dssp C
T ss_pred C
Confidence 3
No 122
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=2.7e-14 Score=126.23 Aligned_cols=78 Identities=14% Similarity=0.223 Sum_probs=71.3
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
....++|||+|||+++++++|+++|++||+|..++. ..+|||||+|.+.++|++||+.|||..|.|+.|+|.++.++.
T Consensus 12 ~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i--~~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~ 89 (98)
T d1wg4a_ 12 RRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADV--QKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP 89 (98)
T ss_dssp CSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEE--ETTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccc--cccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCC
Confidence 345689999999999999999999999999999875 357999999999999999999999999999999999987654
No 123
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=1.8e-14 Score=121.08 Aligned_cols=71 Identities=18% Similarity=0.450 Sum_probs=65.1
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCC
Q 004002 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (780)
Q Consensus 195 LfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk 267 (780)
|||+|||+++++++|+++|++|| +..++ .++.+|||||+|.+.++|++|++.|||..+.|++|.|+|+...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~-~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCF-VDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEE-EETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-cccee-ecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 55554 4778999999999999999999999999999999999998643
No 124
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.8e-14 Score=124.47 Aligned_cols=73 Identities=15% Similarity=0.182 Sum_probs=67.3
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCCCCC
Q 004002 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (780)
Q Consensus 194 tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~pk~ 268 (780)
+|||+|||+++|+++|+++|++||+|..++.. .+|||||+|.+.++|++||+.|+|..|.|+.|.|.++.++.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEEC--TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccc--ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 69999999999999999999999999999753 45999999999999999999999999999999999876543
No 125
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.5e-14 Score=123.08 Aligned_cols=73 Identities=12% Similarity=0.345 Sum_probs=67.8
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
..++|||+|||.++|+++|+++|+.||.|..|+ .+++++|||||+|.+.++|++|++ +++..+.|+.|.|.|.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFK 81 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEc
Confidence 358999999999999999999999999999987 357899999999999999999997 7999999999999875
No 126
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.2e-14 Score=125.52 Aligned_cols=73 Identities=21% Similarity=0.187 Sum_probs=67.5
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
+|||+|||.++++++|+++|++||.|+.+++. ++|||||+|.+.++|++||+.|||..+.|+.|+|.+++++.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEEC--TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccc--ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 59999999999999999999999999999984 35999999999999999999999999999999998876543
No 127
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=5.4e-14 Score=121.52 Aligned_cols=79 Identities=24% Similarity=0.346 Sum_probs=70.9
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHc--cCccccccccccccCCC
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRAL--QNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~L--ng~~l~gr~I~V~~a~p 266 (780)
..|+++|||+|||.++++++|+++|++||.|.+++. .+.+|||||+|.+.++|++|++.+ ++..+.|++|+|.|+..
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~-~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILM-LKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEE-ETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccc-cccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCC
Confidence 458899999999999999999999999999999974 467899999999999999999976 45689999999999976
Q ss_pred CC
Q 004002 267 KD 268 (780)
Q Consensus 267 k~ 268 (780)
+.
T Consensus 84 ~~ 85 (88)
T d2cq1a1 84 KE 85 (88)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 128
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.1e-14 Score=119.35 Aligned_cols=66 Identities=24% Similarity=0.447 Sum_probs=62.3
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccc
Q 004002 195 LFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLD 260 (780)
Q Consensus 195 LfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~ 260 (780)
|||+|||+++|+++|+++|++||.|..++ .+++++|||||+|.+.++|++|++.|+|..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999987 3678999999999999999999999999999999875
No 129
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=3e-14 Score=127.95 Aligned_cols=78 Identities=26% Similarity=0.317 Sum_probs=69.6
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe-CCCcccEEEEEEcCHHHHHHHHHHhCCCcc--CCceEEEEecCCC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-TPHKRHHKFIEFYDVRAAEAALKSLNRSDI--AGKRIKLEPSRPG 352 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i--~Gr~L~V~~a~~k 352 (780)
...+|||+|||.++|+++|+++|++||.|+.|++ ..+++|+|||+|.++++|++||+.|||..| .|++|+|.+++++
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~ 85 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLT 85 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSC
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCc
Confidence 3467999999999999999999999999999876 334689999999999999999999999988 5789999999875
Q ss_pred c
Q 004002 353 G 353 (780)
Q Consensus 353 ~ 353 (780)
.
T Consensus 86 ~ 86 (108)
T d2adba1 86 S 86 (108)
T ss_dssp S
T ss_pred c
Confidence 4
No 130
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=1.9e-14 Score=121.13 Aligned_cols=70 Identities=23% Similarity=0.453 Sum_probs=64.5
Q ss_pred ceeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 279 ~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
+|||+|||.++|+++|+++|++||.|+.|++ +++++|||||+|.+.++|++||+ +++..+.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 4899999999999999999999999999975 56789999999999999999997 5788999999999865
No 131
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=3.7e-14 Score=123.05 Aligned_cols=72 Identities=14% Similarity=0.385 Sum_probs=63.9
Q ss_pred CccceeecCCCCCCChhHH---HHHhcccCCeeEEEeC-----C---CcccEEEEEEcCHHHHHHHHHHhCCCccCCceE
Q 004002 276 NQGTLVVFNLDPSVSNEDL---RQIFGAYGEVKEIRET-----P---HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL---~~~Fs~yG~I~~v~~~-----g---~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L 344 (780)
...+|||+|||+++++++| +++|++||.|+.|++. + ..+|||||+|.+.++|++||+.|||..+.|+.|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3457999999999999999 7789999999999762 2 234899999999999999999999999999999
Q ss_pred EEE
Q 004002 345 KLE 347 (780)
Q Consensus 345 ~V~ 347 (780)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 132
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=3.7e-14 Score=122.00 Aligned_cols=74 Identities=9% Similarity=0.166 Sum_probs=67.9
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
..++|||+|||.++|+++|+++|+.||.|+.|++ ++.++|||||+|.+.++|++||+ ++|..+.|+.|.|.+++
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4578999999999999999999999999999976 46678999999999999999996 79999999999998864
No 133
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.9e-14 Score=123.80 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=68.9
Q ss_pred cceeecCCCCCCChhHHHHHhcccCC-eeEEEe------CCCcccEEEEEEcCHHHHHHHHHHhCCC--ccCCceEEEEe
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGE-VKEIRE------TPHKRHHKFIEFYDVRAAEAALKSLNRS--DIAGKRIKLEP 348 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~-I~~v~~------~g~srG~aFV~F~~~e~A~~Ai~~LnG~--~i~Gr~L~V~~ 348 (780)
+.|||+|||.++++++|+++|++||+ |+.+++ +++++|||||+|.++++|.+|++.|++. .+.|+.|+|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 46999999999999999999999996 888876 3567899999999999999999999754 55799999999
Q ss_pred cCCCchh
Q 004002 349 SRPGGAR 355 (780)
Q Consensus 349 a~~k~~r 355 (780)
|+|+.+.
T Consensus 82 A~p~~~~ 88 (96)
T d2disa1 82 AEPEIDV 88 (96)
T ss_dssp SCSSCST
T ss_pred cCCCCCC
Confidence 9987643
No 134
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=1.9e-13 Score=121.90 Aligned_cols=79 Identities=15% Similarity=0.253 Sum_probs=70.8
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHcc--CccccccccccccCCC
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--NKPLRRRKLDIHFSIP 266 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Ln--g~~l~gr~I~V~~a~p 266 (780)
..++++|||+|||.++|+++|+++|++||.|..++. .+.||+|||+|.+.++|++|++.|+ +..+.|++|+|.|+..
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~-~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~ 90 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMM-MPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTS 90 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEE-ETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSS
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEE-EecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCC
Confidence 347899999999999999999999999999999975 5689999999999999999999885 4567899999999976
Q ss_pred CC
Q 004002 267 KD 268 (780)
Q Consensus 267 k~ 268 (780)
++
T Consensus 91 ~~ 92 (104)
T d1wexa_ 91 KR 92 (104)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 135
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.8e-14 Score=119.67 Aligned_cols=66 Identities=24% Similarity=0.439 Sum_probs=61.6
Q ss_pred eeecCCCCCCChhHHHHHhcccCCeeEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEE
Q 004002 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIK 345 (780)
Q Consensus 280 L~V~NLp~~vteedL~~~Fs~yG~I~~v~~-----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~ 345 (780)
|||+|||.++|+++|+++|++||.|..+++ ++.++|+|||+|.+.++|++|++.|||+.+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999875 566889999999999999999999999999998764
No 136
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=9.8e-14 Score=123.43 Aligned_cols=77 Identities=23% Similarity=0.364 Sum_probs=67.3
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEe------CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~------~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
...+|||+|||.++|+++|+++|++|| |+++++ ++.++|||||+|.+.++|++|+ .||+..|.|++|+|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 347899999999999999999999999 666653 4567899999999999998777 59999999999999999
Q ss_pred CCCch
Q 004002 350 RPGGA 354 (780)
Q Consensus 350 ~~k~~ 354 (780)
.++..
T Consensus 92 ~~~~~ 96 (104)
T d1wi8a_ 92 DQAQD 96 (104)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87653
No 137
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=3.1e-14 Score=125.84 Aligned_cols=76 Identities=21% Similarity=0.186 Sum_probs=70.1
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~ 353 (780)
...+|||+|||.++++++|+++|++||+|+.+++. ++|||||+|.+.++|++||+.|||..+.|+.|+|.+++.+.
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~ 89 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ--KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP 89 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEE--TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhccccccccc--ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCC
Confidence 34579999999999999999999999999999884 46999999999999999999999999999999999987654
No 138
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.44 E-value=7.5e-14 Score=117.25 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=64.3
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe---CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE---TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~---~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
.+|||+|||.++++++|+++|+.||.|+.|++ ....+++|||+|++.++|++|+. ||++.|+|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 37999999999999999999999999999976 33456799999999999999995 8999999999999864
No 139
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=1.8e-13 Score=118.21 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=70.4
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHh--CCCccCCceEEEEecCCC
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSL--NRSDIAGKRIKLEPSRPG 352 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~L--nG~~i~Gr~L~V~~a~~k 352 (780)
.+.++|||+|||.++++++|+++|++||.|..+++. ..+++|||+|.+.++|++|++.+ ++..+.|++|+|.+++.+
T Consensus 6 ~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~-~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~ 84 (88)
T d2cq1a1 6 APSRVLHIRKLPGEVTETEVIALGLPFGKVTNILML-KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHK 84 (88)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhccccccccccc-ccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCC
Confidence 456799999999999999999999999999999885 45799999999999999999976 567899999999999876
Q ss_pred c
Q 004002 353 G 353 (780)
Q Consensus 353 ~ 353 (780)
.
T Consensus 85 ~ 85 (88)
T d2cq1a1 85 E 85 (88)
T ss_dssp S
T ss_pred C
Confidence 4
No 140
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=3.6e-14 Score=121.98 Aligned_cols=74 Identities=22% Similarity=0.296 Sum_probs=66.5
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEE---EE--eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRT---LY--TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~s---v~--~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...+|||+|||+++++++|+++|+.||.|.. +. .+++++|+|||+|.+.++|++|++.|++..|.|++|+|.++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 4568999999999999999999999998743 12 46889999999999999999999999999999999999764
No 141
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.42 E-value=7.9e-14 Score=119.76 Aligned_cols=74 Identities=22% Similarity=0.282 Sum_probs=66.4
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeE-EE----eCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE-IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~-v~----~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
...+|||+|||.+++++||+++|+.||.|.. +. .++.++|+|||+|.+.++|++||+.|||+.+.|++|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3457999999999999999999999998854 22 36778999999999999999999999999999999999875
No 142
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2.3e-13 Score=121.22 Aligned_cols=78 Identities=12% Similarity=0.164 Sum_probs=70.1
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
....+|||+|||+++|+++|+++|..+|.|..+. .+++++|||||+|.++++|++|++ +++..|.||.|.|.++
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 3456899999999999999999999999987754 467899999999999999999997 8999999999999998
Q ss_pred CCCC
Q 004002 265 IPKD 268 (780)
Q Consensus 265 ~pk~ 268 (780)
.+++
T Consensus 92 ~~~~ 95 (104)
T d1wg5a_ 92 SRAE 95 (104)
T ss_dssp CTTT
T ss_pred CHHH
Confidence 7664
No 143
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.42 E-value=1.8e-13 Score=121.10 Aligned_cols=78 Identities=19% Similarity=0.178 Sum_probs=69.6
Q ss_pred CCccceeecCCCCC-CChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHH--HhCCCccCCceEEEEecCC
Q 004002 275 LNQGTLVVFNLDPS-VSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK--SLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 275 ~~~~~L~V~NLp~~-vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~--~LnG~~i~Gr~L~V~~a~~ 351 (780)
...++|||+|||.+ +|+++|+++|++||.|..|++. ..+|+|||+|.+.++|.+|++ .+++..+.|++|+|.+++.
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~-~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~ 94 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILM-RMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEK 94 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEE-TTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECS
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEe-ecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCC
Confidence 34578999999985 8999999999999999999985 457999999999999999998 5788899999999999976
Q ss_pred Cc
Q 004002 352 GG 353 (780)
Q Consensus 352 k~ 353 (780)
+.
T Consensus 95 ~~ 96 (99)
T d1x4fa1 95 YK 96 (99)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 144
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.42 E-value=1.1e-13 Score=116.12 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=64.2
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE---eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY---TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~---~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
++|||+|||+++++++|+++|+.||+|..++ .....+|||||+|.+.++|++|++ ++++.|.|++|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 5899999999999999999999999999887 234567899999999999999996 8999999999999754
No 145
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.42 E-value=3.6e-13 Score=119.97 Aligned_cols=78 Identities=18% Similarity=0.185 Sum_probs=70.4
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHh--CCCccCCceEEEEecCCC
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSL--NRSDIAGKRIKLEPSRPG 352 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~L--nG~~i~Gr~L~V~~a~~k 352 (780)
...++|||+|||.++|+++|+++|++||.|+.|++. +.|++|||+|++.++|++|++.| ++..+.|++|+|.+++.+
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~-~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~ 91 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMM-PFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSK 91 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEE-ecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCC
Confidence 356799999999999999999999999999999985 56899999999999999999988 556789999999999765
Q ss_pred c
Q 004002 353 G 353 (780)
Q Consensus 353 ~ 353 (780)
.
T Consensus 92 ~ 92 (104)
T d1wexa_ 92 R 92 (104)
T ss_dssp S
T ss_pred c
Confidence 4
No 146
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=2e-13 Score=121.26 Aligned_cols=79 Identities=10% Similarity=0.224 Sum_probs=68.7
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEE--E-eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTL--Y-TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 189 e~~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv--~-~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
.....+|||+|||+++|+++|+++|+.||.+... + ..++.+|||||+|.+.++|++|++ |++..|.||.|+|.++.
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNS 90 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCCCSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEEC
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccCcceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcC
Confidence 3455799999999999999999999999854322 1 467899999999999999999987 89999999999999987
Q ss_pred CCC
Q 004002 266 PKD 268 (780)
Q Consensus 266 pk~ 268 (780)
++.
T Consensus 91 ~~~ 93 (102)
T d1weza_ 91 TAG 93 (102)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 147
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.40 E-value=8.5e-14 Score=120.73 Aligned_cols=71 Identities=18% Similarity=0.324 Sum_probs=63.2
Q ss_pred CcEEEEeCCCCCCCHHHH---HHHhhcCCCEEEEEe-----C---CCcceEEEEEEecHHHHHHHHHHccCccccccccc
Q 004002 192 SRTLFVRNINSNVEDSEL---RALFEQYGDIRTLYT-----A---CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLD 260 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeL---r~lF~~yG~I~sv~~-----t---gkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~ 260 (780)
.++|||+|||+++++++| +++|++||+|..|+. + ...+|||||+|.+.++|++|++.|||..|.|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 468999999999999999 678999999999972 2 23459999999999999999999999999999998
Q ss_pred cc
Q 004002 261 IH 262 (780)
Q Consensus 261 V~ 262 (780)
|.
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 73
No 148
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=6e-13 Score=118.44 Aligned_cols=78 Identities=23% Similarity=0.247 Sum_probs=69.2
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEE-e----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-E----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~-~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
.+..+|||+|||+++|++||+++|+.||.|..+. + ++.++|+|||+|.+.++|++|++ +|+..|.||.|+|.++
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 3456899999999999999999999999987743 2 56788999999999999999996 9999999999999999
Q ss_pred CCCc
Q 004002 350 RPGG 353 (780)
Q Consensus 350 ~~k~ 353 (780)
.+..
T Consensus 92 ~~~~ 95 (104)
T d1wg5a_ 92 SRAE 95 (104)
T ss_dssp CTTT
T ss_pred CHHH
Confidence 8764
No 149
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=2.4e-13 Score=120.67 Aligned_cols=78 Identities=13% Similarity=0.196 Sum_probs=67.8
Q ss_pred CCccceeecCCCCCCChhHHHHHhcccCCeeEEE----eCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 275 ~~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~----~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
....+|||+|||+++|++||+++|+.||.+ .|+ .++.++|||||+|.+.++|++|++ ||++.|.||.|+|.++.
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~ 90 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNS 90 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcC
Confidence 344689999999999999999999999854 443 256778999999999999999986 89999999999999998
Q ss_pred CCch
Q 004002 351 PGGA 354 (780)
Q Consensus 351 ~k~~ 354 (780)
++..
T Consensus 91 ~~~~ 94 (102)
T d1weza_ 91 TAGT 94 (102)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7653
No 150
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=2.3e-13 Score=120.41 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=69.8
Q ss_pred CCCCcEEEEeCCCCC-CCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHH--HccCccccccccccccCC
Q 004002 189 EHPSRTLFVRNINSN-VEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMR--ALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 189 e~~s~tLfVgNLp~~-vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~--~Lng~~l~gr~I~V~~a~ 265 (780)
..++++|||+|||.+ +|+++|+++|++||.|..++. .+.+|||||+|.+.++|.+|++ .+++..+.|++|.|.|+.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~-~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYIL-MRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEE-ETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEE-eecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 346789999999985 899999999999999999875 4678999999999999999998 467888999999999996
Q ss_pred CCC
Q 004002 266 PKD 268 (780)
Q Consensus 266 pk~ 268 (780)
.+.
T Consensus 94 ~~~ 96 (99)
T d1x4fa1 94 KYK 96 (99)
T ss_dssp SCS
T ss_pred Ccc
Confidence 543
No 151
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=5.1e-13 Score=115.85 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=68.8
Q ss_pred CccceeecCCCCC-CChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHh--CCCccCCceEEEEecCCC
Q 004002 276 NQGTLVVFNLDPS-VSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSL--NRSDIAGKRIKLEPSRPG 352 (780)
Q Consensus 276 ~~~~L~V~NLp~~-vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~L--nG~~i~Gr~L~V~~a~~k 352 (780)
..++|||+|||.. +|++||+++|++||.|..|++. ..+++|||+|++.++|++|++.| ++..+.|++|+|.++++.
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~-~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~ 85 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLIL-NKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 85 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEEC-SSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCC
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEee-ccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCc
Confidence 4578999999986 8899999999999999999985 45689999999999999999966 677899999999999864
Q ss_pred c
Q 004002 353 G 353 (780)
Q Consensus 353 ~ 353 (780)
.
T Consensus 86 ~ 86 (89)
T d1x4da1 86 K 86 (89)
T ss_dssp T
T ss_pred c
Confidence 3
No 152
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=4.6e-13 Score=116.12 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=69.3
Q ss_pred CCCCcEEEEeCCCCC-CCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHc--cCccccccccccccCC
Q 004002 189 EHPSRTLFVRNINSN-VEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRAL--QNKPLRRRKLDIHFSI 265 (780)
Q Consensus 189 e~~s~tLfVgNLp~~-vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~L--ng~~l~gr~I~V~~a~ 265 (780)
..++++|||+|||.. +|++||+++|++||+|..++. .+.+++|||+|.+.++|++|++.| ++..+.|++|+|.|+.
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i-~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~ 83 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLI-LNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 83 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEE-CSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEEC
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEe-eccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECC
Confidence 457899999999986 889999999999999999985 456789999999999999999976 5667999999999987
Q ss_pred CC
Q 004002 266 PK 267 (780)
Q Consensus 266 pk 267 (780)
..
T Consensus 84 ~~ 85 (89)
T d1x4da1 84 KY 85 (89)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 153
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=1.5e-13 Score=122.70 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=70.3
Q ss_pred CCCcEEEEeCCCCCC-CH----HHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 190 HPSRTLFVRNINSNV-ED----SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 190 ~~s~tLfVgNLp~~v-te----eeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
...++|||+||+.++ ++ ++|+.+|++||+|.+++. .+++|||||+|.+.++|++|++.|||..|.|++|+|.|+
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~-~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a 81 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQY-FKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFA 81 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEE-ETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEE-ecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeec
Confidence 356899999999987 33 569999999999999974 578999999999999999999999999999999999999
Q ss_pred CCCCC
Q 004002 265 IPKDN 269 (780)
Q Consensus 265 ~pk~~ 269 (780)
.+...
T Consensus 82 ~~~~~ 86 (104)
T d1weya_ 82 QTLHI 86 (104)
T ss_dssp CCSSC
T ss_pred ccCCC
Confidence 77654
No 154
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=1.9e-13 Score=122.06 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=69.4
Q ss_pred CccceeecCCCCCC-Ch----hHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSV-SN----EDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~v-te----edL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
...+|||+||+.++ ++ ++|+++|++||.|+++++. +++++|||+|.+.++|++|++.|||..|.|++|+|.|++
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~-k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~ 82 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYF-KSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQ 82 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEE-TTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCC
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEe-cCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecc
Confidence 34689999999986 33 5699999999999999885 568999999999999999999999999999999999998
Q ss_pred CCch
Q 004002 351 PGGA 354 (780)
Q Consensus 351 ~k~~ 354 (780)
+...
T Consensus 83 ~~~~ 86 (104)
T d1weya_ 83 TLHI 86 (104)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 7653
No 155
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=4.1e-13 Score=119.20 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=66.7
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeE-EEe----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE-IRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~-v~~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
...+|||+|||.++|+++|+++|+.||.|.. +.+ ++.++|+|||+|.+.++|++||+ |||..|.|+.|.|.++.
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~ 85 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVT 85 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEEC
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECC
Confidence 3468999999999999999999999998865 332 56789999999999999999996 99999999999999875
Q ss_pred C
Q 004002 351 P 351 (780)
Q Consensus 351 ~ 351 (780)
.
T Consensus 86 ~ 86 (103)
T d2cpya1 86 L 86 (103)
T ss_dssp H
T ss_pred H
Confidence 4
No 156
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=3.3e-13 Score=119.84 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=66.4
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEE-E----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTL-Y----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv-~----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
...+|||+|||+++|+++|+++|..||.|..+ . .+++++|||||+|.+.++|++|++ |++..|.|+.|.|.++.
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~ 85 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVT 85 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEEC
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECC
Confidence 45789999999999999999999999987542 2 468899999999999999999996 89999999999998764
No 157
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=4.9e-14 Score=122.25 Aligned_cols=72 Identities=17% Similarity=0.317 Sum_probs=63.9
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----------eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccc
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY----------TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIH 262 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~----------~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~ 262 (780)
|+|||+|||.++|+++|+++|++||.|..+. .+++++|||||+|.+.++|++|++ |+|..+.|++|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 7899999999999999999999999765432 346789999999999999999995 99999999999997
Q ss_pred cCC
Q 004002 263 FSI 265 (780)
Q Consensus 263 ~a~ 265 (780)
.+.
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 158
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.5e-12 Score=117.46 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=67.8
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEE-----EeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI-----RETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v-----~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
...+|||+|||+++|+++|+++|+.||.|..+ ..++.++|+|||+|.+.++|++|++ |||..|+|+.|.|..+.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEEC
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcC
Confidence 34589999999999999999999999987542 2367889999999999999999996 99999999999999886
Q ss_pred CCc
Q 004002 351 PGG 353 (780)
Q Consensus 351 ~k~ 353 (780)
+..
T Consensus 96 ~~~ 98 (112)
T d1wela1 96 KKG 98 (112)
T ss_dssp HHH
T ss_pred hHH
Confidence 654
No 159
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.3e-13 Score=119.44 Aligned_cols=71 Identities=18% Similarity=0.327 Sum_probs=62.8
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe----------CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEE
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----------TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~----------~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~ 347 (780)
++|||+|||.++|+++|+++|+.||.|..+.+ ++.++|||||+|.+.++|++|++ |||..+.|++|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 47999999999999999999999998766532 34678999999999999999985 99999999999997
Q ss_pred ec
Q 004002 348 PS 349 (780)
Q Consensus 348 ~a 349 (780)
.+
T Consensus 81 r~ 82 (90)
T d1u2fa_ 81 RP 82 (90)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 160
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.1e-12 Score=118.31 Aligned_cols=75 Identities=9% Similarity=0.177 Sum_probs=66.5
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEE---E--eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTL---Y--TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 191 ~s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv---~--~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
..++|||+|||+++|+++|+++|+.||.|..+ . ..|+++|||||+|.+.++|++|++ |++..|+|+.|.|..+.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~ 95 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPIT 95 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEEC
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcC
Confidence 45799999999999999999999999987432 1 578999999999999999999997 89999999999998764
Q ss_pred C
Q 004002 266 P 266 (780)
Q Consensus 266 p 266 (780)
+
T Consensus 96 ~ 96 (112)
T d1wela1 96 K 96 (112)
T ss_dssp H
T ss_pred h
Confidence 3
No 161
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=6.8e-13 Score=118.42 Aligned_cols=72 Identities=24% Similarity=0.272 Sum_probs=67.6
Q ss_pred cceeecCCCCCCChhHHHHHhcccCCeeEEEe----CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 004002 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (780)
Q Consensus 278 ~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~----~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a 349 (780)
.+++|.+++.++++++|+++|++||+|++|++ +++++|+|||+|.+.++|.+|++.|||++++|++|+|+++
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 47999999999999999999999999999986 5677899999999999999999999999999999999875
No 162
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=9.5e-12 Score=112.37 Aligned_cols=78 Identities=21% Similarity=0.170 Sum_probs=67.6
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCH-HHHHHHHHHhCCCccCCceEEEEecCCCchh
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDV-RAAEAALKSLNRSDIAGKRIKLEPSRPGGAR 355 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~-e~A~~Ai~~LnG~~i~Gr~L~V~~a~~k~~r 355 (780)
.-.+||+|||.++|+++|+++|++||+|..|++. +.+|+|||+|.+. ++|.+|+..||+..+.++.+.|.++..+...
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~-~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~~~~~ 89 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFV-RGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEV 89 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECC-TTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEECCHHH
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEe-cCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeeccchh
Confidence 3467999999999999999999999999999986 5689999999985 7899999999999998877777777665443
No 163
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1e-11 Score=110.02 Aligned_cols=66 Identities=18% Similarity=0.329 Sum_probs=59.7
Q ss_pred CCCCcEEEEeC--CCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCcccc
Q 004002 189 EHPSRTLFVRN--INSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLR 255 (780)
Q Consensus 189 e~~s~tLfVgN--Lp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~ 255 (780)
..++++|+|.| ||.++|+++|+++|++||.|..++. .+.+|||||+|.+.++|++|+++|+|+.|.
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~-~~~k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLM-PPNKPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEEC-CTTCSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEee-ccCccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 35678999966 9999999999999999999999974 457899999999999999999999999873
No 164
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=1.3e-11 Score=109.25 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=56.9
Q ss_pred CccceeecC--CCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCcc
Q 004002 276 NQGTLVVFN--LDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDI 339 (780)
Q Consensus 276 ~~~~L~V~N--Lp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i 339 (780)
+..+|+|.| ||.++|+++|+++|++||.|+.|++. ..++||||+|.+.++|++|++.|||+.+
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~-~~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMP-PNKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECC-TTCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeec-cCccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 345788855 99999999999999999999999985 4578999999999999999999999977
No 165
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2.1e-11 Score=107.50 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=70.7
Q ss_pred CCCCCCcEEEEeCC--CCCCC---------HHHHHHHhhcCCCEEEEE-eCCCcceEEEEEEecHHHHHHHHHHccCccc
Q 004002 187 YGEHPSRTLFVRNI--NSNVE---------DSELRALFEQYGDIRTLY-TACKHRGFVMISYYDIRAARTAMRALQNKPL 254 (780)
Q Consensus 187 ~~e~~s~tLfVgNL--p~~vt---------eeeLr~lF~~yG~I~sv~-~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l 254 (780)
.....+++|+|+|+ |.++. +++|++.|++||.|..|+ .....+|+|||+|.+.++|.+|++.|+|..+
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 34457899999999 65432 368999999999999987 4667889999999999999999999999999
Q ss_pred cccccccccCCCCC
Q 004002 255 RRRKLDIHFSIPKD 268 (780)
Q Consensus 255 ~gr~I~V~~a~pk~ 268 (780)
.||+|.|.|..++.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987654
No 166
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.15 E-value=2.4e-11 Score=103.37 Aligned_cols=75 Identities=16% Similarity=0.197 Sum_probs=64.7
Q ss_pred CccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCce-EEEEecCCCc
Q 004002 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKR-IKLEPSRPGG 353 (780)
Q Consensus 276 ~~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~-L~V~~a~~k~ 353 (780)
+...|+|+|+|++.+++.| +.|++||+|.++++. ..++||||+|.++++|++||+ +||..++|+. |.|.++..+.
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~-~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~k~ 78 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCIDKN 78 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC-SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCCHH
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEec-CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCChh
Confidence 4567999999999987655 579999999999974 668999999999999999996 9999999974 6799887653
No 167
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=3.1e-11 Score=106.42 Aligned_cols=78 Identities=17% Similarity=0.299 Sum_probs=68.0
Q ss_pred CccceeecCC--CCCCC---------hhHHHHHhcccCCeeEEEe-CCCcccEEEEEEcCHHHHHHHHHHhCCCccCCce
Q 004002 276 NQGTLVVFNL--DPSVS---------NEDLRQIFGAYGEVKEIRE-TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKR 343 (780)
Q Consensus 276 ~~~~L~V~NL--p~~vt---------eedL~~~Fs~yG~I~~v~~-~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~ 343 (780)
..++|+|.|| |.++. ++||++.|++||.|..|++ .+..+|+|||+|.+.++|.+|+..|||+.++|++
T Consensus 7 ~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~ 86 (99)
T d2dita1 7 HERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQ 86 (99)
T ss_dssp SCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETTEE
T ss_pred CccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECCEE
Confidence 4578999999 54432 3689999999999999986 5567899999999999999999999999999999
Q ss_pred EEEEecCCCc
Q 004002 344 IKLEPSRPGG 353 (780)
Q Consensus 344 L~V~~a~~k~ 353 (780)
|+|++..++.
T Consensus 87 i~v~~~~g~~ 96 (99)
T d2dita1 87 ITAQAWDGTT 96 (99)
T ss_dssp CEEEECCSCC
T ss_pred EEEEEeCCcC
Confidence 9999987654
No 168
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=2.8e-12 Score=114.34 Aligned_cols=72 Identities=14% Similarity=0.219 Sum_probs=67.5
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----eCCCcceEEEEEEecHHHHHHHHHHccCccccccccccccC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~----~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a 264 (780)
+.++|++++.+++|++|+++|++||+|.+|+ .+++++|||||+|.+.++|.+|++.|+|+.+.|++|.|.|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 4688999999999999999999999999998 36789999999999999999999999999999999999885
No 169
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=4.3e-11 Score=107.98 Aligned_cols=73 Identities=15% Similarity=0.243 Sum_probs=65.3
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecH-HHHHHHHHHccCccccccccccccCCC
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDI-RAARTAMRALQNKPLRRRKLDIHFSIP 266 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~-e~A~~Al~~Lng~~l~gr~I~V~~a~p 266 (780)
..+||+|||.++|+++|+++|++||+|..|+. .+.+|||||.|.+. ++|..|+..|++..+.++.+.|.+...
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i-~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDF-VRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEEC-CTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEE-ecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 46699999999999999999999999999985 35789999999995 789999999999999988888877654
No 170
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.00 E-value=1.2e-10 Score=98.91 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=62.0
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCccccccc-cccccCCC
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRK-LDIHFSIP 266 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~-I~V~~a~p 266 (780)
.+.|+|.++|++.+++.| ++|++||+|.+++. ++.+|||||+|.+.++|++||+ +||..|.|+. |.|..+..
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~-~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVM-SNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEE-CSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEe-cCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCC
Confidence 478999999999997655 57999999999974 6789999999999999999996 8999999985 56776543
No 171
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=2e-09 Score=95.39 Aligned_cols=76 Identities=24% Similarity=0.326 Sum_probs=64.6
Q ss_pred CccceeecCC--CCCCC--------hhHHHHHhcccCCeeEEEeC-------CCcccEEEEEEcCHHHHHHHHHHhCCCc
Q 004002 276 NQGTLVVFNL--DPSVS--------NEDLRQIFGAYGEVKEIRET-------PHKRHHKFIEFYDVRAAEAALKSLNRSD 338 (780)
Q Consensus 276 ~~~~L~V~NL--p~~vt--------eedL~~~Fs~yG~I~~v~~~-------g~srG~aFV~F~~~e~A~~Ai~~LnG~~ 338 (780)
+++.|.|.|| +.++. .+||++.|++||.|++|.+. ...+|++||+|.+.++|.+|++.|||+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 3567999999 55543 36799999999999999862 2345899999999999999999999999
Q ss_pred cCCceEEEEecCC
Q 004002 339 IAGKRIKLEPSRP 351 (780)
Q Consensus 339 i~Gr~L~V~~a~~ 351 (780)
++||.|.+.+..+
T Consensus 83 f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 83 FANRVVVTKYCDP 95 (104)
T ss_dssp SSSSCCEEEEECH
T ss_pred ECCeEEEEEEcCH
Confidence 9999999999864
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=9.8e-10 Score=97.41 Aligned_cols=76 Identities=16% Similarity=0.353 Sum_probs=65.2
Q ss_pred CCcEEEEeCC--CCCCC--------HHHHHHHhhcCCCEEEEEe-------CCCcceEEEEEEecHHHHHHHHHHccCcc
Q 004002 191 PSRTLFVRNI--NSNVE--------DSELRALFEQYGDIRTLYT-------ACKHRGFVMISYYDIRAARTAMRALQNKP 253 (780)
Q Consensus 191 ~s~tLfVgNL--p~~vt--------eeeLr~lF~~yG~I~sv~~-------tgkskG~aFV~F~~~e~A~~Al~~Lng~~ 253 (780)
|++.|.|+|+ |.++. .++|++.|++||.|.+|++ .....|++||+|.+.++|.+|++.|+|+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 6899999999 55543 3578999999999999983 12356899999999999999999999999
Q ss_pred ccccccccccCCC
Q 004002 254 LRRRKLDIHFSIP 266 (780)
Q Consensus 254 l~gr~I~V~~a~p 266 (780)
+.||+|.|.|..+
T Consensus 83 f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 83 FANRVVVTKYCDP 95 (104)
T ss_dssp SSSSCCEEEEECH
T ss_pred ECCeEEEEEEcCH
Confidence 9999999998753
No 173
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=1.2e-08 Score=87.94 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=61.9
Q ss_pred eeEEEecCCCCCCHHHHHHHHhhcCCCcceeEE-eeccccCCcc-eeeEEeccCCccchHHHHHHhcCceeEEEEeeCCC
Q 004002 695 TTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLY-LPIDFKNKCN-VGYAFINMLSPLHIIPFYEVLFSCAIGILFFNNNN 772 (780)
Q Consensus 695 tt~mirniPn~~~~~~l~~~i~~~~~~~ydf~y-lp~d~~~~~n-~gyafin~~~~~~~~~f~~~f~~~~~~~~~~~~~~ 772 (780)
|.|+||++|+.+|++++++.|+ ..+++||+| .|=+...+-+ -..|||||.+++++..|.+.|+|+. |-|+.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~--~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~-----F~D~~ 74 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQ--PMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYV-----FLDNK 74 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHC--SCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCE-----EECTT
T ss_pred ceEEEecCCCCCCHHHHHHHhC--CcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcE-----EEcCC
Confidence 8999999999999999999998 468899987 5555554433 3569999999999999999999997 65555
Q ss_pred ceee
Q 004002 773 NYYY 776 (780)
Q Consensus 773 ~~~~ 776 (780)
+..|
T Consensus 75 g~~~ 78 (91)
T d1uw4a_ 75 GQEY 78 (91)
T ss_dssp CCEE
T ss_pred CCEe
Confidence 5444
No 174
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03 E-value=0.00072 Score=54.22 Aligned_cols=59 Identities=25% Similarity=0.426 Sum_probs=52.0
Q ss_pred hHHHHHhcccCCeeEEEeCCCccc--EEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 004002 292 EDLRQIFGAYGEVKEIRETPHKRH--HKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (780)
Q Consensus 292 edL~~~Fs~yG~I~~v~~~g~srG--~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~ 350 (780)
+-|..+|+++|.|..+.+.+.+.+ .|-|...+..+|.-|+..|+.++|++++|.|.++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 345577899999999998766655 69999999999999999999999999999999874
No 175
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.24 E-value=0.0022 Score=53.81 Aligned_cols=56 Identities=21% Similarity=0.452 Sum_probs=49.4
Q ss_pred hHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 004002 292 EDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (780)
Q Consensus 292 edL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG~~i~Gr~L~V~~a~~ 351 (780)
.+|.+.|..||+|+-||+.. +...|+|.+-+.|.+|++ |+|.++.|+.|+|....+
T Consensus 39 ~~Llq~l~~~GeViLvRFv~---d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~~~ 94 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQ---GQMLVTFADSHSALSVLD-VDGMKVKGRAVKISGPSS 94 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEET---TEEEEECSCSHHHHHHHH-GGGSEETTEEEEEECCCC
T ss_pred HHHHHHHhhCCeEEEEEEeC---CeEEEEECCcHHHHHHhc-cCCeEEcceEEEEecCCC
Confidence 56889999999999999863 568999999999999998 899999999999986543
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.58 E-value=0.015 Score=49.10 Aligned_cols=64 Identities=5% Similarity=0.050 Sum_probs=53.5
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-eCCC------cceEEEEEEecHHHHHHHHHHccCccccc
Q 004002 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY-TACK------HRGFVMISYYDIRAARTAMRALQNKPLRR 256 (780)
Q Consensus 193 ~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~-~tgk------skG~aFV~F~~~e~A~~Al~~Lng~~l~g 256 (780)
++|.||.||+.+||+++.+.+...|++...+ ..|+ .-.-|+|.|.+.++...-.+..+|+.+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 5899999999999999999999999887655 1111 22469999999999999999999998854
No 177
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.53 E-value=0.0085 Score=47.87 Aligned_cols=58 Identities=12% Similarity=0.219 Sum_probs=50.4
Q ss_pred HHHHHhhcCCCEEEEEeCCCcce--EEEEEEecHHHHHHHHHHccCccccccccccccCC
Q 004002 208 ELRALFEQYGDIRTLYTACKHRG--FVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (780)
Q Consensus 208 eLr~lF~~yG~I~sv~~tgkskG--~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V~~a~ 265 (780)
.|...|.++|.|.++.....+.| .|-|...+.++|..|+..|+..+|++++|.|.++.
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 35578899999999986555544 69999999999999999999999999999998864
No 178
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.84 E-value=0.039 Score=46.05 Aligned_cols=69 Identities=19% Similarity=0.331 Sum_probs=55.1
Q ss_pred CCcEEEEeCCCCCCCH---------HHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHccCcccccccccc
Q 004002 191 PSRTLFVRNINSNVED---------SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDI 261 (780)
Q Consensus 191 ~s~tLfVgNLp~~vte---------eeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Lng~~l~gr~I~V 261 (780)
+..||.|.=..++.++ .+|.+.|..||+|.-+|.- .+-..|+|.+-+.|-+|++ ++|.++.|+.|+|
T Consensus 14 pDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv---~d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~I 89 (95)
T d1ufwa_ 14 LDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRIN---QGQMLVTFADSHSALSVLD-VDGMKVKGRAVKI 89 (95)
T ss_dssp TTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEE---TTEEEEECSCSHHHHHHHH-GGGSEETTEEEEE
T ss_pred CCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEe---CCeEEEEECCcHHHHHHhc-cCCeEEcceEEEE
Confidence 5678888655544433 3688899999999888732 2458899999999999999 8999999999998
Q ss_pred cc
Q 004002 262 HF 263 (780)
Q Consensus 262 ~~ 263 (780)
.-
T Consensus 90 t~ 91 (95)
T d1ufwa_ 90 SG 91 (95)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.35 E-value=0.32 Score=40.99 Aligned_cols=56 Identities=14% Similarity=0.284 Sum_probs=47.0
Q ss_pred ccceeecCCCCCCChhHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhC
Q 004002 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLN 335 (780)
Q Consensus 277 ~~~L~V~NLp~~vteedL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~Ln 335 (780)
..-+|.-..|..+...||.++|++||.|.-..+... -|||.-.+.++|+.+++.++
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswIddT---Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDT---SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEETT---EEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcCCCceEEEEecCc---eEEEEecCHHHHHHHHHHhc
Confidence 346888889999999999999999999877666433 59999999999999987554
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.75 E-value=3.4 Score=34.51 Aligned_cols=56 Identities=14% Similarity=0.250 Sum_probs=44.7
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHcc
Q 004002 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 250 (780)
Q Consensus 192 s~tLfVgNLp~~vteeeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Ln 250 (780)
...+|.-..|..+...||.++|+.||.|.---+. ---|||...+.++|+.+++.+.
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswId---dTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWID---DTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEE---TTEEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcCCCceEEEEec---CceEEEEecCHHHHHHHHHHhc
Confidence 3568888899999999999999999987533221 1259999999999999887654
No 181
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=26.37 E-value=42 Score=27.95 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=31.7
Q ss_pred hHHHHHhcccCCeeEEEeCCCcccEEEEEEcCHHHHHHHHHHhCC
Q 004002 292 EDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNR 336 (780)
Q Consensus 292 edL~~~Fs~yG~I~~v~~~g~srG~aFV~F~~~e~A~~Ai~~LnG 336 (780)
.++++.+..+|. ++++|. ....|..|++.++|.+|.+.+..
T Consensus 60 ~~~~~~L~~~g~---~~MSGS-GstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRLTGT-GACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSC---EEECTT-SSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhccc---ceecCC-CCEEEEEeCCHHHHHHHHHHcCc
Confidence 455666677875 467764 35789999999999999998853
No 182
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=25.36 E-value=42 Score=27.97 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=31.5
Q ss_pred HHHHHHhhcCCCEEEEEeCCCcceEEEEEEecHHHHHHHHHHcc
Q 004002 207 SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 250 (780)
Q Consensus 207 eeLr~lF~~yG~I~sv~~tgkskG~aFV~F~~~e~A~~Al~~Ln 250 (780)
.++++.+..+|.+ +.+| +-..+|..|.+.++|++|.+.+.
T Consensus 60 ~~~~~~L~~~g~~---~MSG-SGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RLTG-TGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSCE---EECT-TSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhcccc---eecC-CCCEEEEEeCCHHHHHHHHHHcC
Confidence 4566777888864 4566 45679999999999999999874
Done!