BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004006
(779 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/804 (68%), Positives = 647/804 (80%), Gaps = 57/804 (7%)
Query: 1 MDN---ILSLSAPHFPHTPATLLTHKPHHPTTTSLSFSLKQPPPPSPTPPEPH-NLHRPP 56
MDN +LSLSAPHFP++ L H P S+SFSLKQPPP P PPE +L RP
Sbjct: 1 MDNGGSVLSLSAPHFPYSATILRRHSP----VASISFSLKQPPPQPPEPPESPPDLRRPE 56
Query: 57 KSSRPT------------RSKIPKNPFKNLLNSATTHVPSPPSHS------------LSA 92
KS + ++ + NP K L N ++ SP S L++
Sbjct: 57 KSIGSSSSSSSPSPIPSPKTPLKINPLKGLTNRSSV---SPLVQSEVSSKVSSFGSSLAS 113
Query: 93 KLRLSSKLSPPPPPPPPPPPAEQLQ-EPQSQGNDEIPDAENRSPSSSLATSQEETEFRQE 151
KLRLSSKLSPPPPPPPPPP E Q + + + + P+ E R+P + EFRQE
Sbjct: 114 KLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNP---------QQEFRQE 164
Query: 152 GKIFVGNLPNWIKKHLVMEFFRQFGPIKNVILIKGYNNFEKNVGFGFVIYDGPAAEKSAM 211
GKIFVGNLP WIKK EFFRQFGPI+NVILIKG++ EKN GFGF+IY AAEKSAM
Sbjct: 165 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIY---AAEKSAM 221
Query: 212 KAVEFDGVEFHGRVLTVKLDDGRRLKNKAEVRARWVAGNNGEE-----FRSTWHKEREWH 266
KAVEFDGVEFHGR+LTVKLDDG+RLK KAE R RWV GEE +S+WH+ERE
Sbjct: 222 KAVEFDGVEFHGRILTVKLDDGKRLKTKAEQRVRWV--EEGEEDTKMSNKSSWHQEREGS 279
Query: 267 RREFRKAVETQPENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARG 326
R+ ++ ++T +NWQAV+SAFE+I KPSR EFGLMV +Y RRGDMHRAR+TFE MRARG
Sbjct: 280 RKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARG 339
Query: 327 IEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAAD 386
I PT +YT+LIHAYAVGRDM+EALSCVRKMKEEGIEMSLVTYS+IVGGF+K G+AEAAD
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 387 HWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGY 446
+WF+EAK H TLNA IYG IIYA CQT NMERAEALVR+MEEEGIDAPI IYH MMDGY
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 447 TIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNM 506
T++ +E+K L+VF+RLKECGF+P++++YGCLINLYTK+GK+SKALEVS+VMK G+KHN+
Sbjct: 460 TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNL 519
Query: 507 KTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKE 566
KTYSM+INGF+KLKDWAN FAVFED++++G+KPDV+LYNNII AFCGMGNMDRAI VKE
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 567 MQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQ 626
MQK RHRPT+RTFMPIIHG+A++G+M+R+LE+FDMMRR GC+PTVHTFN LI GLVEKRQ
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 627 MEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEA 686
MEKA+EILDEMTLAG+S NEHTYT IM GYAS+GDTGKAFEYFT+L+NEGL++D+FTYEA
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 687 LLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEG 746
LLKACCKSGRMQSALAVTKEMSA+ IPRN+FVYNILIDGWARRGDVWEAADL+QQMK+EG
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 747 VQPDVHTYTSFINACKCSKSNQRN 770
V+PD+HTYTSFI+A CSK+ N
Sbjct: 760 VKPDIHTYTSFISA--CSKAGDMN 781
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 218/468 (46%), Gaps = 42/468 (8%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
M++ Y D + F+ ++ G PT+ Y LI+ Y + +AL R MKEEG
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
++ +L TYS+++ GF K+ + A FE+ + + I+Y NII A C NM+RA
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
V++M++ + ++ GY G+ + L VF+ ++ CG P++ ++ LIN
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
+ ++ KA+E+ M +G+ N TY+ ++ G+ + D F F + +GL D+
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
Y +++A C G M A+ + KEM S + +I G+AR G++
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV--------- 745
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661
+A +++ +M G+ P+ HTYT+ + + GD
Sbjct: 746 --------------------------WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
+A + ++ G++ ++ TY L+K ++ + AL+ +EM A I + VY+
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 722 LIDGWARRGDVWEA------ADLMQQMKQEGVQPDVHTYTSFINACKC 763
L+ R + EA + ++M + G+ D+ T + + C C
Sbjct: 840 LLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHW-SKCLC 886
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 177/356 (49%), Gaps = 6/356 (1%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
K + + + +M+N + + D A FE+M G++P + +Y N+I A+ +M+ A+
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V++M++ + T+ I+ G+AK G+ + F+ + + +I
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ R ME+A ++ +M G+ A Y +M GY +G+ K F RL+ G I
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y L+ K G++ AL V+K M + I N Y++LI+G+ + D + + +
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
++G+KPD+ Y + I A G+M+RA ++EM+ +P +T+ +I G+ARA
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKA------IEILDEMTLAGI 642
++AL ++ M+ G P ++ L+ L+ + + +A + I EM AG+
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGL 871
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 228/462 (49%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ + +N + RR + A M G EP + ++L++ Y + + +A++ V +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + T++ ++ G A A ++ +R + + YG ++ C+ +++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A +L++ ME+ I+A + IY+ ++DG + + L +F + G P + +Y LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G+ S A + M I N+ T+S LI+ F+K +++++++ +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD+ Y+++I FC +D A H+ + M + P T+ +I GF +A ++ +E+
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M + G + T+ LI G + R + A + +M G+ PN TY ++ G
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G KA F L+ +E D++TY +++ CK+G+++ + +S + + N
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
YN +I G+ R+G EA L+++MK++G P+ TY + I A
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 225/480 (46%), Gaps = 1/480 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS EF +++ A+ E M+ GI L+ Y+ I+ + + AL+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ KM + G E +VT S ++ G+ A ++ E + + +I+
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
A ALV M + G + Y +++G G+ + L + +++++ ++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y +I+ K + AL + M + GI+ ++ TYS LI+ W++ + D++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+ P+VV ++ +I AF G + A + EM K P T+ +I+GF +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A +F++M C P V T++ LI G + +++E+ +E+ EM+ G+ N TYTT++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
HG+ D A F ++ + G+ ++ TY LL CK+G++ A+ V + + +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQRNGRS 773
+ + YNI+I+G + G V + +L + +GV P+V Y + I+ C K ++ S
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG-FCRKGSKEEADS 559
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 214/452 (47%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N Y + A + M G +P +T LIH + EA++ V +M + G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
+ LVTY +V G K G+ + A ++ ++ + +IY II C+ ++M+ A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
L +M+ +GI + Y ++ G + + E +P+++++ LI+ +
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
K GK+ +A ++ M I ++ TYS LINGF +FE ++ P+V
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
V Y+ +I+ FC ++ + + +EM + + T+ +IHGF +A + A +F
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661
M G P + T+N L+ GL + ++ KA+ + + + + + P+ +TY ++ G G
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
+E F L +G+ +V Y ++ C+ G + A ++ K+M N+ YN
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 722 LIDGWARRGDVWEAADLMQQMKQEGVQPDVHT 753
LI R GD +A+L+++M+ G D T
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 190/397 (47%), Gaps = 4/397 (1%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
+R +P +G +VN +RGD+ A + M IE + +Y +I + M+
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
+AL+ +M +GI + TYS ++ G A + ER N + + +I
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERL--KECG 466
A + + AE L +M + ID I Y +++G+ + ++ +FE + K+C
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC- 394
Query: 467 FSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVF 526
P++++Y LI + K +V + +E+ + M G+ N TY+ LI+GF + +D N
Sbjct: 395 -FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 527 AVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGF 586
VF+ ++ G+ P+++ YN ++ C G + +A+ + + +Q+ P T+ +I G
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 587 ARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNE 646
+AG+++ E+F + G P V +N +I G K E+A +L +M G PN
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 647 HTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFT 683
TY T++ GD + E ++R+ G D T
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 204/437 (46%), Gaps = 4/437 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP F +++ A + M RG +P L Y +++ D++ ALS
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
++KM++ IE +V Y+ I+ G K + + A + F E + + Y ++I C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
A L+ DM E I+ + + ++D + G + +++ + + P I
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LIN + ++ +A + ++M S N+ TYS LI GF K K +F ++
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ GL + V Y +I F + D A + K+M P T+ ++ G + G++
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+A+ +F+ ++RS P ++T+N +I G+ + ++E E+ ++L G+SPN Y T+
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G+ G +A K++ +G + TY L++A + G +++ + KEM +
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 713 PRNT----FVYNILIDG 725
+ V N+L DG
Sbjct: 605 AGDASTIGLVTNMLHDG 621
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 143/319 (44%), Gaps = 35/319 (10%)
Query: 477 LINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDG 536
L N + I KV A+++ M S ++ ++ L++ K+ + V ++ E + G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 537 LKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 596
+ D+ Y+ I FC + A+ ++ +M K + P T +++G+ + + A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 597 EIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGY 656
+ D M G P TF LI GL + +A+ ++D+M G P+ TY T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 657 ASLGDT------------GK-----------------------AFEYFTKLRNEGLELDV 681
GD GK A FT++ N+G+ DV
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 682 FTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQ 741
FTY +L+ C GR A + +M +KI N ++ LID + + G + EA L +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 742 MKQEGVQPDVHTYTSFINA 760
M + + PD+ TY+S IN
Sbjct: 354 MIKRSIDPDIFTYSSLING 372
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 237/464 (51%), Gaps = 2/464 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP F +++ R + A E+M + G+ P +T ++ Y D++ AL
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATL-NAIIYGNIIYAQ 411
+M E G S V+ ++IV GF K G E A ++ +E + + + ++
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 412 CQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSI 471
C+ +++ A ++ M +EG D + Y+ ++ G +G ++ + V +++ SP+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 472 ISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFED 531
++Y LI+ K +V +A E+++V+ S GI ++ T++ LI G ++ +FE+
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 532 VMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGE 591
+ G +PD YN +I + C G +D A++++K+M+ + T+ +I GF +A +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 592 MKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTT 651
+ A EIFD M G T+N LI GL + R++E A +++D+M + G P+++TY +
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 652 IMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQK 711
++ + GD KA + + + G E D+ TY L+ CK+GR++ A + + + +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 712 IPRNTFVYNILIDGWARRGDVWEAADLMQQM-KQEGVQPDVHTY 754
I YN +I G R+ EA +L ++M +Q PD +Y
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 213/460 (46%), Gaps = 12/460 (2%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE-GIEMS 365
R G ++ E+M++ E + LI +YA +E LS V M +E G++
Sbjct: 94 GRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPD 153
Query: 366 LVTYS-----IIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERA 420
Y+ ++ G K+ A K +T N +I A C+ + A
Sbjct: 154 THFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV-----LIKALCRAHQLRPA 208
Query: 421 EALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
++ DM G+ + +M GY G+ + L + E++ E G S S +S +++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 481 YTKIGKVSKALE-VSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKP 539
+ K G+V AL + ++ G + T++ L+NG K + + + ++++G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 540 DVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIF 599
DV YN++I C +G + A+ ++ +M P + T+ +I + +++ A E+
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 600 DMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASL 659
++ G +P V TFN+LI GL R A+E+ +EM G P+E TY ++ S
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 660 GDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVY 719
G +A ++ G V TY L+ CK+ + + A + EM + RN+ Y
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 720 NILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
N LIDG + V +AA LM QM EG +PD +TY S +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 209/474 (44%), Gaps = 35/474 (7%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + M+N + + M GI+P + + LI A + A+
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ M G+ T++ ++ G+ + G+ + A E+ E + + + I++ C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +E A +++M + GF P
Sbjct: 271 KEGRVEDALNFIQEMSNQD----------------------------------GFFPDQY 296
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ L+N K G V A+E+ VM G ++ TY+ +I+G KL + V + +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ P+ V YN +I C ++ A + + + + P TF +I G
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+ A+E+F+ MR GC P T+N LI L K ++++A+ +L +M L+G + + TY T+
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G+ T +A E F ++ G+ + TY L+ CKS R++ A + +M +
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
+ + YN L+ + R GD+ +AAD++Q M G +PD+ TY + I+ CK +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 38/369 (10%)
Query: 403 IYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFE-R 461
+Y I+ ++ + + + ++ DM+ + + ++++ Y +++ L V +
Sbjct: 85 LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 462 LKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKD 521
+ E G P Y ++NL G K +E+S K+
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHA---------------------KMSV 182
Query: 522 WANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMP 581
W G+KPDV +N +I+A C + AI ++++M P +TF
Sbjct: 183 W-------------GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229
Query: 582 IIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMT-LA 640
++ G+ G++ AL I + M GC + + N ++ G ++ ++E A+ + EM+
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 641 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA 700
G P+++T+ T+++G G A E + EG + DV+TY +++ CK G ++ A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 701 LAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ V +M + NT YN LI + V EA +L + + +G+ PDV T+ S I
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 761 CKCSKSNQR 769
C N R
Sbjct: 410 L-CLTRNHR 417
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 40/265 (15%)
Query: 537 LKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 596
P+ LY I+ G+ D I+++M+ R + TF+ +I +A+ L
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 597 EIFDMMRRS------------------------------------GCIPTVHTFNALILG 620
+ D M G P V TFN LI
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 621 LVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELD 680
L Q+ AI +L++M G+ P+E T+TT+M GY GD A ++ G
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 681 VFTYEALLKACCKSGRMQSALAVTKEMSAQK--IPRNTFVYNILIDGWARRGDVWEAADL 738
+ ++ CK GR++ AL +EMS Q P + + +N L++G + G V A ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 739 MQQMKQEGVQPDVHTYTSFINA-CK 762
M M QEG PDV+TY S I+ CK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCK 342
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 40/234 (17%)
Query: 568 QKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQM 627
+K P + I+ R+G +I + M+ S C TF LI +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 628 EKAIEILDEMTLA-GISPNEHTYTTIMHGYASLGDTGKAFEY-FTKLRNEGLELDVFTYE 685
++ + ++D M G+ P+ H Y +++ G++ K E K+ G++ DV T+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFN 193
Query: 686 ALLKACCKSGRMQSALAVTKEM-SAQKIP-RNTFV------------------------- 718
L+KA C++ +++ A+ + ++M S +P TF
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 719 --------YNILIDGWARRGDVWEAADLMQQMK-QEGVQPDVHTYTSFINA-CK 762
N+++ G+ + G V +A + +Q+M Q+G PD +T+ + +N CK
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 292 KKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEAL 351
+KP + + ++ ++ R GD+ +A + M + G EP + Y LI +E A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 352 SCVRKMKEEGIEMSLVTYS-IIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYA 410
+R ++ +GI ++ Y+ +I G F K EA + + E ++ A +A+ Y +
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Query: 411 QCQTRN-MERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEE 453
C + A + ++ E+G +M+ +G + EE
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 240/498 (48%), Gaps = 6/498 (1%)
Query: 269 EFRKAVET--QPENWQAVVSAFERIKKP----SRREFGLMVNYYARRGDMHRARQTFENM 322
EF K + + + V+S ER++ + +++N + RR + A M
Sbjct: 82 EFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 323 RARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNA 382
G EP + ++L++ Y G+ + EA++ V +M + + VT++ ++ G A
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 383 EAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMM 442
A + R + YG ++ C+ +++ A +L++ ME+ I+A + IY +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 443 MDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGI 502
+D N L +F + G P++++Y LI G+ S A + M I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 503 KHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIH 562
N+ T+S LI+ F+K +++++++ + PD+ Y+++I FC +D A H
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 563 IVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLV 622
+ + M + P T+ +I GF +A ++ +E+F M + G + T+N LI GL
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 623 EKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVF 682
+ + A +I +M G+ P+ TY+ ++ G G KA F L+ +E D++
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 683 TYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQM 742
TY +++ CK+G+++ + +S + + N +Y +I G+ R+G EA L ++M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 743 KQEGVQPDVHTYTSFINA 760
K++G P+ TY + I A
Sbjct: 562 KEDGTLPNSGTYNTLIRA 579
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 215/458 (46%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N Y + A + M +P + LIH + EA++ + +M G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
+ L TY +V G K G+ + A ++ ++ + +IY II A C +N+ A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
L +M+ +GI + Y+ ++ G + + E +P+++++ LI+ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
K GK+ +A ++ M I ++ TYS LINGF +FE ++ P+V
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
V YN +I+ FC ++ + + +EM + + T+ +I G +AG+ A +IF
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661
M G P + T++ L+ GL + ++EKA+ + + + + + P+ +TY ++ G G
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
++ F L +G++ +V Y ++ C+ G + A A+ +EM N+ YN
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 722 LIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
LI R GD +A+L+++M+ G D T + IN
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 209/437 (47%), Gaps = 4/437 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ F +++ A + M ARG +P L Y +++ D++ ALS
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
++KM++ IE +V Y+ I+ N A + F E + N + Y ++I C
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
A L+ DM E I+ + + ++D + G + +++ + + P I
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LIN + ++ +A + ++M S N+ TY+ LI GF K K +F ++
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ GL + V YN +I+ G+ D A I K+M + P T+ ++ G + G++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
++AL +F+ +++S P ++T+N +I G+ + ++E ++ ++L G+ PN YTT+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G+ G +A F +++ +G + TY L++A + G ++ + KEM +
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 713 PRN----TFVYNILIDG 725
+ + V N+L DG
Sbjct: 602 VGDASTISMVINMLHDG 618
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 152/292 (52%)
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
PSI+ + L++ K+ K + + + M++ I +++ +Y++LIN F + AV
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
+M+ G +PD+V ++++ +C + A+ +V +M ++P + TF +IHG
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
+ A+ + D M GC P + T+ ++ GL ++ ++ A+ +L +M I +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
YTTI+ + + A FT++ N+G+ +V TY +L++ C GR A + +M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+KI N ++ LID + + G + EA L +M + + PD+ TY+S IN
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 194/402 (48%), Gaps = 1/402 (0%)
Query: 365 SLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALV 424
S+V ++ ++ AKM + E + + + Y +I C+ + A A++
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 425 RDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
M + G + I +++GY + + + +++ + P+ +++ LI+
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 485 GKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
K S+A+ + M + G + ++ TY ++NG K D ++ + + + ++ DVV+Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
II A C N++ A+++ EM + RP T+ +I G A + M
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
P V TF+ALI V++ ++ +A ++ DEM I P+ TY+++++G+ +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
A F + ++ +V TY L+K CK+ R++ + + +EMS + + NT YN LI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
G + GD A + ++M +GV PD+ TY+ ++ CK K
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 162/342 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ + ++ G A + +M R I P + ++ LI A+ + EA
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+M + I+ + TYS ++ GF + A H FE + N + Y +I C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + +E L R+M + G+ Y+ ++ G G+ + +F+++ G P II
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y L++ K GK+ KAL V + ++ S ++ ++ TY+++I G K + + +F +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
G+KP+V++Y +I FC G + A + +EM+++ P S T+ +I R G+
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 634
+ E+ MR G + T + +I L + R + +E+L
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 288 FERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM 347
ER P+ F +++ + + G + A + ++ M R I+P + Y++LI+ + + +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 348 EEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNI 407
+EA M + ++VTY+ ++ GF K E F E +R N + Y +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 408 IYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGF 467
I Q + + A+ + + M +G+ I Y +++DG G EK L+VFE L++
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLK--LKDWANV 525
P I +Y +I K GKV ++ + G+K N+ Y+ +I+GF + LK+ A+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD- 555
Query: 526 FAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
A+F ++ DG P+ YN +IRA G+ + ++KEM+
Sbjct: 556 -ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 245/498 (49%), Gaps = 6/498 (1%)
Query: 269 EFRKAVET--QPENWQAVVSAFERIKKP----SRREFGLMVNYYARRGDMHRARQTFENM 322
EF K + + + + V+S E++++ + + +++N + RR + A M
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 323 RARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNA 382
G EP++ ++L++ Y G+ + +A++ V +M E G +T++ ++ G A
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 383 EAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMM 442
A + +R N + YG ++ C+ +++ A L+ ME I+A + I++ +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 443 MDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGI 502
+D + + L +F+ ++ G P++++Y LI+ G+ S A ++ M I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 503 KHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIH 562
N+ T++ LI+ F+K + + +D+++ + PD+ YN++I FC +D+A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 563 IVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLV 622
+ + M + P T+ +I GF ++ ++ E+F M G + T+ LI GL
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 623 EKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVF 682
+ A ++ +M G+ P+ TY+ ++ G + G KA E F ++ ++LD++
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 683 TYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQM 742
Y +++ CK+G++ + +S + + N YN +I G + + EA L+++M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 743 KQEGVQPDVHTYTSFINA 760
K++G PD TY + I A
Sbjct: 492 KEDGPLPDSGTYNTLIRA 509
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 217/472 (45%), Gaps = 36/472 (7%)
Query: 329 PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW 388
P++ + L+ A A + + +S KM+ GI +L TY+I++ F + A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
+ + + + +++ C + + A ALV M E G + ++ G +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK---------------------- 486
+ + + +R+ + G P++++YG ++N K G
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 487 -------------VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
V AL + K M++ GI+ N+ TYS LI+ W++ + D++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+ P++V +N +I AF G A + +M K P T+ +I+GF +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
+A ++F+ M C P + T+N LI G + +++E E+ EM+ G+ + TYTT++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
G GD A + F ++ ++G+ D+ TY LL C +G+++ AL V M +I
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSK 765
+ ++Y +I+G + G V + DL + +GV+P+V TY + I+ CSK
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL-CSK 478
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 214/461 (46%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+PS ++N Y + A + M G P +T LIH + EA++
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V +M + G + +LVTY ++V G K G+ + A + + + + +I+ II + C
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ R+++ A L ++ME +GI + Y ++ G + + E +P+++
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ + K GK +A ++ M I ++ TY+ LINGF +FE +
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ PD+ YN +I+ FC ++ + +EM + T+ +I G G+
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A ++F M G P + T++ L+ GL ++EKA+E+ D M + I + + YTT+
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G G ++ F L +G++ +V TY ++ C +Q A A+ K+M
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHT 753
++ YN LI R GD +A+L+++M+ D T
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 3/321 (0%)
Query: 282 QAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAY 341
Q + E+ P+ F +++ + + G A + ++M R I+P + Y +LI+ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 342 AVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNA 401
+ +++A M + L TY+ ++ GF K E F E R +
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 402 IIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFER 461
+ Y +I + + A+ + + M +G+ I Y +++DG G EK L VF+
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 462 LKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKD 521
+++ I Y +I K GKV ++ + G+K N+ TY+ +I+G +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 522 WANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMP 581
+A+ + + DG PD YN +IRA G+ + +++EM+ R + T +
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IG 539
Query: 582 IIHGFARAGEMKRALEIFDMM 602
++ G + ++ DM+
Sbjct: 540 LVANMLHDGRLDKSF--LDML 558
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 226/454 (49%), Gaps = 8/454 (1%)
Query: 310 GDMHR-ARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 368
G+ H+ A F +M +R I PTL + ++ A+ +++ ALS +R M + G + V
Sbjct: 195 GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI 254
Query: 369 YSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDME 428
Y ++ +K A EE +A + ++I C+ + A +V M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 429 EEGIDAPIDI-YHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKV 487
G AP DI Y +M+G IG + +F R+ + P I+ + LI+ + G++
Sbjct: 315 IRGF-APDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRL 369
Query: 488 SKALEV-SKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
A V S ++ S GI ++ TY+ LI G+ K V D+ G KP+V Y
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
++ FC +G +D A +++ EM + +P + F +I F + + A+EIF M R G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
C P V+TFN+LI GL E +++ A+ +L +M G+ N TY T+++ + G+ +A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGW 726
+ ++ +G LD TY +L+K C++G + A ++ ++M + NILI+G
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 727 ARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
R G V EA + ++M G PD+ T+ S IN
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 231/469 (49%), Gaps = 7/469 (1%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +++ ++ ++ A Q E M G P + ++I + EA
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAA-DHWFEEAKERHATLNAIIYGNIIYAQC 412
V +M G +TY ++ G K+G +AA D ++ K N +I+G + + +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR- 368
Query: 413 QTRNMERAEALVRDM-EEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSI 471
++ A+A++ DM GI + Y+ ++ GY G L V ++ G P++
Sbjct: 369 ----LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 472 ISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFED 531
SY L++ + K+GK+ +A V M + G+K N ++ LI+ F K +F +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 532 VMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGE 591
+ R G KPDV +N++I C + + A+ ++++M E + T+ +I+ F R GE
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 592 MKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTT 651
+K A ++ + M G T+N+LI GL +++KA + ++M G +P+ +
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 652 IMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQK 711
+++G G +A E+ ++ G D+ T+ +L+ C++GR++ L + +++ A+
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 712 IPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
IP +T +N L+ + G V++A L+ + ++G P+ T++ + +
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 202/423 (47%), Gaps = 15/423 (3%)
Query: 368 TYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDM 427
+Y++++ + A + F + R +G ++ A C ++ A +L+RDM
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 428 EEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKV 487
+ G IY ++ + + L + E + G P ++ +I K ++
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 488 SKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNI 547
++A ++ M G + TY L+NG K+ V A +D+ KP++V++N +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI---GRVDAA-KDLFYRIPKPEIVIFNTL 359
Query: 548 IRAFCGMGNMDRAIHIVKEMQKERH-RPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
I F G +D A ++ +M P T+ +I+G+ + G + ALE+ MR G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
C P V+++ L+ G + ++++A +L+EM+ G+ PN + ++ + +A
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGW 726
E F ++ +G + DV+T+ +L+ C+ ++ AL + ++M ++ + NT YN LI+ +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 727 ARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQ---------RNGRSWSE 776
RRG++ EA L+ +M +G D TY S I C+ + ++ R+G + S
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 777 AKC 779
C
Sbjct: 600 ISC 602
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 37/375 (9%)
Query: 421 EALVRDMEEEGIDAPIDIYHMMMDGYT---IIGNEEKCLIVFERLKECGFSPSIISYGCL 477
+ L+ M++EGI ++ +M Y G + ++ + C P+ SY +
Sbjct: 131 DRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSC--EPTFKSYNVV 188
Query: 478 INLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGL 537
+ + A V M S I + T+ +++ F + + + ++ D+ + G
Sbjct: 189 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248
Query: 538 KPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALE 597
P+ V+Y +I + ++ A+ +++EM P + TF +I G + + A +
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 598 IFDMMRRSGCIPT-------------------------------VHTFNALILGLVEKRQ 626
+ + M G P + FN LI G V +
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 627 MEKAIEILDEM-TLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYE 685
++ A +L +M T GI P+ TY ++++GY G G A E +RN+G + +V++Y
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 686 ALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQE 745
L+ CK G++ A V EMSA + NT +N LI + + + EA ++ ++M ++
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 746 GVQPDVHTYTSFINA 760
G +PDV+T+ S I+
Sbjct: 489 GCKPDVYTFNSLISG 503
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 137/294 (46%), Gaps = 4/294 (1%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP+ + ++V+ + + G + A M A G++P + LI A+ + EA+
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
R+M +G + + T++ ++ G ++ + A + N + Y +I A
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 413 QTRNMERAEALVRDMEEEGIDAPID--IYHMMMDGYTIIGNEEKCLIVFERLKECGFSPS 470
+ ++ A LV +M +G +P+D Y+ ++ G G +K +FE++ G +PS
Sbjct: 541 RRGEIKEARKLVNEMVFQG--SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 471 IISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFE 530
IS LIN + G V +A+E K M G ++ T++ LING + + +F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 531 DVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIH 584
+ +G+ PD V +N ++ C G + A ++ E ++ P RT+ ++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 44/311 (14%)
Query: 487 VSKALEV-SKVMKSSGIKHNMKTYSMLI-----NG--------FLKLKDWANVF--AVFE 530
VS ++E+ S +G +H+ Y +LI NG +++KD VF ++F
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150
Query: 531 DVMRD---------------------GLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQK 569
+MRD +P YN ++ A ++ +M
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 570 ERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEK 629
+ PT TF ++ F E+ AL + M + GC+P + LI L + ++ +
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 630 AIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLK 689
A+++L+EM L G P+ T+ ++ G +A + ++ G D TY L+
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 690 ACCKSGRMQSALAVTKEMSAQKIPR-NTFVYNILIDGWARRGDVWEAADLMQQM-KQEGV 747
CK GR+ +A K++ +IP+ ++N LI G+ G + +A ++ M G+
Sbjct: 331 GLCKIGRVDAA----KDL-FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 748 QPDVHTYTSFI 758
PDV TY S I
Sbjct: 386 VPDVCTYNSLI 396
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 2/236 (0%)
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
++G + +Y +I G ++ +M+ E F+ I+ + +AG
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 594 RALEIFDMMRRS-GCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+ + MR C PT ++N ++ LV + A + +M I P T+ +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
M + ++ + A + G + Y+ L+ + K R+ AL + +EM
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSN 767
+ +N +I G + + EAA ++ +M G PD TY +N CK + +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 239/498 (47%), Gaps = 41/498 (8%)
Query: 269 EFRKAVET--QPENWQAVVSAFERIKKP----SRREFGLMVNYYARRGDMHRARQTFENM 322
EF K + + + + V+S E++++ + + +++N + RR + A M
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 323 RARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNA 382
G EP++ ++L++ Y G+ + +A++ V +M E G +T++ ++ G A
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 383 EAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMM 442
A + +R N + YG ++ C+ +++ A L+ ME I+A + IY +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 443 MDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGI 502
+D +E+ L NL+T+ M++ G+
Sbjct: 267 IDSLCKYRHEDDAL----------------------NLFTE-------------MENKGV 291
Query: 503 KHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIH 562
+ N+ TYS LI+ + W++ + D++ + P+VV +N +I AF G + A
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 563 IVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLV 622
+ EM K P T+ +I+GF + A +F++M C P V T+N LI G
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 623 EKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVF 682
+ +++++ +E+ EM+ G+ N TYTT++HG+ D A F ++ ++G+ ++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 683 TYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQM 742
TY LL CK+G+++ A+ V + + K+ + YNI+I+G + G V + DL +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 743 KQEGVQPDVHTYTSFINA 760
+GV+PDV Y + I+
Sbjct: 532 SLKGVKPDVIIYNTMISG 549
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 199/425 (46%), Gaps = 20/425 (4%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+PS ++N Y + A + M G P +T LIH + EA++
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V +M + G + +LVTY ++V G K G+ + A + + + N +IY +I + C
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFER----------L 462
+ R+ + A L +ME +G+ + Y ++ CL +ER +
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLI----------SCLCNYERWSDASRLLSDM 321
Query: 463 KECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDW 522
E +P+++++ LI+ + K GK+ +A ++ M I ++ TYS LINGF
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 523 ANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPI 582
+FE ++ P+VV YN +I FC +D + + +EM + + T+ +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 583 IHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGI 642
IHGF +A + A +F M G P + T+N L+ GL + ++EKA+ + + + + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 643 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALA 702
P +TY ++ G G ++ F L +G++ DV Y ++ C+ G + A A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 703 VTKEM 707
+ ++M
Sbjct: 562 LFRKM 566
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 184/362 (50%), Gaps = 4/362 (1%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
+R +P+ +G++VN +RGD+ A M A IE + +Y+ +I + R +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
+AL+ +M+ +G+ +++TYS ++ A + ER N + + +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERL--KECG 466
A + + AE L +M + ID I Y +++G+ + ++ +FE + K+C
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC- 396
Query: 467 FSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVF 526
P++++Y LIN + K ++ + +E+ + M G+ N TY+ LI+GF + +D N
Sbjct: 397 -FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 527 AVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGF 586
VF+ ++ DG+ P+++ YN ++ C G +++A+ + + +Q+ + PT T+ +I G
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 587 ARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNE 646
+AG+++ ++F + G P V +N +I G K E+A + +M G P+
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 647 HT 648
T
Sbjct: 576 GT 577
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 131/267 (49%), Gaps = 8/267 (2%)
Query: 511 MLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKE 570
+L NG +K + +F +++ P + +N ++ A M D I + ++MQ+
Sbjct: 56 ILRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 571 RHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKA 630
T+ +I+ F R ++ AL + M + G P++ T ++L+ G +++ A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 631 IEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKA 690
+ ++D+M G P+ T+TT++HG +A ++ G + ++ TY ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 691 CCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPD 750
CK G + A + +M A KI N +Y+ +ID + +A +L +M+ +GV+P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 751 VHTYTSFINACKCSKSNQRNGRSWSEA 777
V TY+S I +C C N WS+A
Sbjct: 295 VITYSSLI-SCLC------NYERWSDA 314
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 544 YNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMR 603
Y I+R +D AI + M K R P+ F ++ A+ + + + + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 604 RSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTG 663
R G ++T+N LI + Q+ A+ +L +M G P+ T +++++GY
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 664 KAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILI 723
A ++ G D T+ L+ + A+A+ M + N Y +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 724 DGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CK 762
+G +RGD+ A +L+ +M+ ++ +V Y++ I++ CK
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 244/498 (48%), Gaps = 6/498 (1%)
Query: 269 EFRKAVET--QPENWQAVVSAFERIKKP----SRREFGLMVNYYARRGDMHRARQTFENM 322
EF K + + + + V+S E++++ + +++N + RR + A M
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 323 RARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNA 382
G EP++ ++L++ Y G+ + +A++ V +M E G +T++ ++ G A
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 383 EAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMM 442
A + +R N + YG ++ C+ + + A L+ ME I+A + I++ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 443 MDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGI 502
+D + + L +F+ ++ G P++++Y LI+ G+ S A ++ M I
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 503 KHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIH 562
N+ T++ LI+ F+K + +++D+++ + PD+ YN+++ FC +D+A
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 563 IVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLV 622
+ + M + P T+ +I GF ++ ++ E+F M G + T+ LI GL
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 623 EKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVF 682
+ A ++ +M G+ P+ TY+ ++ G + G KA E F ++ ++LD++
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 683 TYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQM 742
Y +++ CK+G++ + +S + + N YN +I G + + EA L+++M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 743 KQEGVQPDVHTYTSFINA 760
K++G P+ TY + I A
Sbjct: 567 KEDGPLPNSGTYNTLIRA 584
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 215/461 (46%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+PS ++N Y + A + M G P +T LIH + EA++
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V +M + G + +LVTY ++V G K G+ + A + + + + +I+ II + C
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ R+++ A L ++ME +GI + Y ++ G + + E +P+++
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ + K GK +A ++ M I ++ TY+ L+NGF +FE +
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ PDVV YN +I+ FC ++ + +EM + T+ +I G G+
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A ++F M G P + T++ L+ GL ++EKA+E+ D M + I + + YTT+
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G G ++ F L +G++ +V TY ++ C +Q A A+ K+M
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHT 753
N+ YN LI R GD +A+L+++M+ D T
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 215/472 (45%), Gaps = 36/472 (7%)
Query: 329 PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW 388
P++ + L+ A A + + +S KM+ I L TY+I++ F + A
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
+ + + + +++ C + + A ALV M E G + ++ G +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK---------------------- 486
+ + + +R+ + G P++++YG ++N K G
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 487 -------------VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
V AL + K M++ GI+ N+ TYS LI+ W++ + D++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+ P++V +N +I AF G A + +M K P T+ +++GF +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
+A ++F+ M C P V T+N LI G + +++E E+ EM+ G+ + TYTT++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
G GD A + F ++ ++G+ D+ TY LL C +G+++ AL V M +I
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSK 765
+ ++Y +I+G + G V + DL + +GV+P+V TY + I+ CSK
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL-CSK 553
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%)
Query: 282 QAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAY 341
Q + E+ P+ F +++ + + G A + +++M R I+P + Y +L++ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 342 AVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNA 401
+ +++A M + +VTY+ ++ GF K E F E R +
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 402 IIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFER 461
+ Y +I + + A+ + + M +G+ I Y +++DG G EK L VF+
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 462 LKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKD 521
+++ I Y +I K GKV ++ + G+K N+ TY+ +I+G +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 522 WANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTF 579
+A+ + + DG P+ YN +IRA G+ + +++EM+ R + T
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 37/253 (14%)
Query: 511 MLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKE 570
+L NG +K + +F +++ P +V +N ++ A M D I + ++MQ+
Sbjct: 56 ILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 571 RHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKA 630
T+ +I+ F R ++ AL + M + G P++ T ++L+ G +++ A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 631 IEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKA 690
+ ++D+M G P+ T+TT++HG L N+ E
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLF--------------LHNKASE------------ 208
Query: 691 CCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPD 750
A+A+ M + N Y ++++G +RGD A +L+ +M+ ++ D
Sbjct: 209 ---------AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 751 VHTYTSFINA-CK 762
V + + I++ CK
Sbjct: 260 VVIFNTIIDSLCK 272
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 94/221 (42%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + ++ + + + + F M RG+ YT LI D + A
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
++M +G+ ++TYSI++ G G E A F+ ++ L+ IY +I C+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
++ L + +G+ + Y+ M+ G ++ + +++KE G P+ +
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLIN 514
Y LI + + G + + E+ + M+S + T ++ N
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 76/171 (44%)
Query: 310 GDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 369
GD A++ F+ M + G+ P + Y+ L+ +E+AL M++ I++ + Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 370 SIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEE 429
+ ++ G K G + F + N + Y +I C R ++ A AL++ M+E
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 430 EGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
+G Y+ ++ + G++ + ++ C F + G + N+
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 619
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 229/515 (44%), Gaps = 36/515 (6%)
Query: 279 ENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLI 338
E Q + E P+ + MVN Y + G++ A Q + G++P YT+LI
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 339 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHAT 398
Y +D++ A +M +G + V Y+ ++ G + A F + K+
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 399 LNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIV 458
Y +I + C + A LV++MEE GI I Y +++D EK +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 459 FERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLK 518
++ E G P++I+Y LIN Y K G + A++V ++M+S + N +TY+ LI G+ K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 519 LKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRT 578
+ V ++ + PDVV YN++I C GN D A ++ M P T
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 579 FMPIIHGFARAGEMKRALEIFDMMRRSG-------------------------------- 606
+ +I ++ ++ A ++FD + + G
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 607 ---CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTG 663
C+P TFNALI GL ++++A + ++M G+ P T T ++H GD
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 664 KAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILI 723
A+ F ++ + G + D TY ++ C+ GR+ A + +M + + F Y+ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 724 DGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
G+ G A D++++M+ G +P HT+ S I
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 224/462 (48%), Gaps = 5/462 (1%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ ++N AR G + +Q + M + P ++ Y +++ Y ++EEA V K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G++ TY+ ++ G+ + + ++A F E + N + Y ++I+ C R ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEK--CLIVFERLKECGFSPSIISYGC 476
A L M+++ + Y +++ ++ G+E K L + + ++E G P+I +Y
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIK--SLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 477 LINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDG 536
LI+ K KA E+ M G+ N+ TY+ LING+ K + V E +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 537 LKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 596
L P+ YN +I+ +C N+ +A+ ++ +M + + P T+ +I G R+G A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 597 EIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGY 656
+ +M G +P T+ ++I L + +++E+A ++ D + G++PN YT ++ GY
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 657 ASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNT 716
G +A K+ ++ + T+ AL+ C G+++ A + ++M +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 717 FVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
ILI + GD A QQM G +PD HTYT+FI
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 227/482 (47%), Gaps = 20/482 (4%)
Query: 288 FERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM 347
E+ P+ + ++N Y +RG + A E M +R + P Y LI Y ++
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443
Query: 348 EEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNI 407
+A+ + KM E + +VTY+ ++ G + GN ++A +R + Y ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 408 IYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGF 467
I + C+++ +E A L +E++G++ + +Y ++DGY G ++ ++ E++
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFA 527
P+ +++ LI+ GK+ +A + + M G++ + T ++LI+ LK D+ + ++
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 528 VFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFA 587
F+ ++ G KPD Y I+ +C G + A ++ +M++ P T+ +I G+
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 588 RAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKR------------------QMEK 629
G+ A ++ MR +GC P+ HTF +LI L+E + + +
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 630 AIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKL-RNEGLELDVFTYEALL 688
+E+L++M ++PN +Y ++ G +G+ A + F + RNEG+ + ALL
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 689 KACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 748
CCK + A V +M +LI G ++G+ + Q + Q G
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 749 PD 750
D
Sbjct: 864 ED 865
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 216/427 (50%), Gaps = 1/427 (0%)
Query: 333 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEA 392
Y L+++ A ++E +M E+ + ++ TY+ +V G+ K+GN E A+ + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 393 KERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNE 452
E + Y ++I CQ ++++ A + +M +G Y ++ G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 453 EKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSML 512
++ + +F ++K+ P++ +Y LI + S+AL + K M+ +GIK N+ TY++L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 513 INGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERH 572
I+ + + ++ GL P+V+ YN +I +C G ++ A+ +V+ M+ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 573 RPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIE 632
P +RT+ +I G+ ++ + +A+ + + M +P V T+N+LI G + A
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 633 ILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACC 692
+L M G+ P++ TYT+++ +A + F L +G+ +V Y AL+ C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 693 KSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVH 752
K+G++ A + ++M ++ N+ +N LI G G + EA L ++M + G+QP V
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 753 TYTSFIN 759
T T I+
Sbjct: 604 TDTILIH 610
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 195/429 (45%), Gaps = 35/429 (8%)
Query: 342 AVGRDMEEALSCVRKM-KEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLN 400
+VG D L RKM K+E E+ Y +I+G + + N+ A +E K+ +
Sbjct: 155 SVG-DALYVLDLCRKMNKDERFELK---YKLIIGCYNTLLNSLARFGLVDEMKQVYM--- 207
Query: 401 AIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFE 460
+M E+ + I Y+ M++GY +GN E+
Sbjct: 208 -------------------------EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 461 RLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLK 520
++ E G P +Y LI Y + + A +V M G + N Y+ LI+G +
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 521 DWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFM 580
+F + D P V Y +I++ CG A+++VKEM++ +P T+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 581 PIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLA 640
+I + ++A E+ M G +P V T+NALI G ++ +E A+++++ M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 641 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA 700
+SPN TY ++ GY + KA K+ + DV TY +L+ C+SG SA
Sbjct: 423 KLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 701 LAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ M+ + + + + Y +ID + V EA DL ++Q+GV P+V YT+ I+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 761 -CKCSKSNQ 768
CK K ++
Sbjct: 542 YCKAGKVDE 550
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 202/457 (44%), Gaps = 19/457 (4%)
Query: 288 FERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM 347
ER P + +++ R G+ A + M RG+ P YT++I + + +
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 348 EEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNI 407
EEA ++++G+ ++V Y+ ++ G+ K G + A E+ ++ N++ + +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 408 IYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGF 467
I+ C ++ A L M + G+ + +++ G+ + F+++ G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFA 527
P +Y I Y + G++ A ++ M+ +G+ ++ TYS LI G+ L F
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 528 VFEDVMRDGLKPDVVLYNNIIR---------------AFCGMGNM---DRAIHIVKEMQK 569
V + + G +P + ++I+ C M NM D + ++++M +
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 570 ERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRS-GCIPTVHTFNALILGLVEKRQME 628
P ++++ +I G G ++ A ++FD M+R+ G P+ FNAL+ + ++
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 629 KAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALL 688
+A +++D+M G P + ++ G G+ + F L G D ++ ++
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 689 KACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDG 725
K G +++ + M ++ Y++LI+G
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 229/469 (48%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+PS+ +G + + D+ + + F M+ I P++ +Y LI G+ M +A
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+M + SL+TY+ ++ G+ K GN E + E K H + I + ++
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +E AE ++++M++ G + ++ DGY+ E L V+E + G +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+ L+N K GK+ KA E+ + G+ N Y+ +I+G+ + D E +
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G+KPD + YN +IR FC +G M+ A V +M+ + P+ T+ +I G+ R E
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+ +I M +G +P V ++ LI L + ++ +A + +M G+SP Y +
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G S G AF + ++ +G+EL++ TY L+ +G++ A + E+S + +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINAC 761
+ F YN LI G+ G+V L ++MK+ G++P + TY I+ C
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 224/485 (46%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS L++++ + F N+ P+ +Y I A D+ + L
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+MK + I S+ Y++++ G K A+ F+E R + I Y +I C+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
N E++ + M+ + I+ + ++ ++ G G E V + +K+ GF P +
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ L + Y+ K AL V + SG+K N T S+L+N K + M
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
GL P+ V+YN +I +C G++ A ++ M+K+ +P + +I F GEM+
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A + + M+ G P+V T+N LI G K + +K +IL EM G PN +Y T++
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
+ +A + + G+ V Y L+ CC G+++ A +KEM + I
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQRNGRS 773
N YN LIDG + G + EA DL+ ++ ++G++PDV TY S I+ + + QR
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 774 WSEAK 778
+ E K
Sbjct: 622 YEEMK 626
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 236/465 (50%), Gaps = 4/465 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS + +++ Y + G+ ++ + E M+A IEP+L + L+ +E+A +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+++MK+ G T+SI+ G++ AEAA +E A + +NA ++ A C+
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+E+AE ++ +G+ IY+ M+DGY G+ + E +++ G P ++
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y CLI + ++G++ A + MK G+ +++TY++LI G+ + ++ F + +++
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+G P+VV Y +I C + A + ++M+ P R + +I G G+++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A M + G + T+N LI GL ++ +A ++L E++ G+ P+ TY +++
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
GY G+ + + +++ G++ + TY L+ C K G ++ + EMS +
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS---LK 662
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+ VYN ++ +A GD+ +A +L +QM ++ + D TY S I
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 236/513 (46%), Gaps = 43/513 (8%)
Query: 289 ERIK----KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVG 344
ER+K +PS F ++ + G + A + M+ G P ++ L Y+
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 345 RDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIY 404
E AL + G++M+ T SI++ K G E A+ + N +IY
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 405 ----------GNIIYAQ-------------------------CQTRNMERAEALVRDMEE 429
G+++ A+ C+ ME AE V M+
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 430 EGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSK 489
+G+ ++ Y++++ GY +KC + + +++ G P+++SYG LIN K K+ +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 490 ALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIR 549
A V + M+ G+ ++ Y+MLI+G + F +++++ G++ ++V YN +I
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 550 AFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIP 609
G + A ++ E+ ++ +P T+ +I G+ AG ++R + +++ M+RSG P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 610 TVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYF 669
T+ T++ LI L K +E + EM+L P+ Y ++H YA GD KAF
Sbjct: 633 TLKTYHLLI-SLCTKEGIELTERLFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 670 TKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARR 729
++ + + LD TY +L+ K G++ ++ EM+A+++ YNI++ G
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 730 GDVWEAADLMQQMKQEGVQPDVHTYTSFINACK 762
D A ++M+++G DV ++ K
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLK 781
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 210/419 (50%), Gaps = 4/419 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + M++ Y R+GD+ AR E M +G++P Y LI + +ME A
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
V KMK +G+ S+ TY+I++GG+ + + +E ++ N + YG +I C+
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ A+ + RDME+ G+ + IY+M++DG G E + + + G ++++
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y LI+ + GK+S+A ++ + G+K ++ TY+ LI+G+ + A++E++
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
R G+KP + Y+ +I + C ++ + EM +P + ++H +A G+M+
Sbjct: 627 RSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDME 682
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
+A + M T+N+LILG ++ ++ + ++DEM + P TY I+
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
G+ + D A+ ++ +++ +G LDV L+ + R + A V EM+ + +
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 152/330 (46%), Gaps = 40/330 (12%)
Query: 468 SPSI---ISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWAN 524
SPS+ SY L L + +S+A ++ +++ GI + + ++L++ +K K +
Sbjct: 103 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRV 162
Query: 525 VFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIH 584
VF +++ +P +Y I+A + ++ + + + M+ +R P+ + +I
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 585 GFARAGEMKRALEIFDMMRRSGCIPTVHT------------------------------- 613
G + M A ++FD M +P++ T
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 614 ----FNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYF 669
FN L+ GL + +E A +L EM G P+ T++ + GY+S A +
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 670 TKLRNEGLELDVFTYEALLKACCKSGRMQSALAVT-KEMSAQKIPRNTFVYNILIDGWAR 728
+ G++++ +T LL A CK G+++ A + +EM+ +P N +YN +IDG+ R
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP-NEVIYNTMIDGYCR 401
Query: 729 RGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+GD+ A ++ M+++G++PD Y I
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 280 NWQAVVSAFERIK----KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYT 335
N Q ++ +E +K KP+ + + L+++ + G + + F M ++P L VY
Sbjct: 614 NVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYN 669
Query: 336 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKER 395
++H YAV DME+A + ++M E+ I + TY+ ++ G K+G +E R
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 396 HATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDG 445
A Y I+ C+ ++ A R+M+E+G + I + ++ G
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + +++ YA GDM +A + M + I Y +LI + E S
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ +M +E TY+IIV G ++ + +A W+ E +E+ L+ I ++
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLK 781
Query: 413 QTRNMERAEALVRDM 427
+ + AE ++ +M
Sbjct: 782 EEWRSKEAEIVISEM 796
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 224/462 (48%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ +++N + RR + A M G EP + +L++ + G + +A+S V +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + T++ ++ G + A A + + + + YG ++ C+ +++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A +L++ ME+ I+ + IY+ ++D N L +F + G P++++Y LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
G+ S A + M I N+ T+S LI+ F+K +++++++ +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD+ Y+++I FC +D A H+ + M + P T+ +I GF +A + +E+
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M + G + T+ LI G + R+ + A + +M G+ P+ TY+ ++ G +
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G A F L+ +E D++TY +++ CK+G+++ + +S + + N
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
Y ++ G+ R+G EA L ++MK+EG PD TY + I A
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 246/510 (48%), Gaps = 6/510 (1%)
Query: 257 STWHKEREWHRREFRKAVETQPENWQA--VVSAFERIKK----PSRREFGLMVNYYARRG 310
S W ++ R ++RK + + + V+ F + K PS EF +++ A+
Sbjct: 36 SFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMN 95
Query: 311 DMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYS 370
E M+ GI L+ Y+ LI+ + + AL+ + KM + G E +VT +
Sbjct: 96 KFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLN 155
Query: 371 IIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEE 430
++ GF A + E ++ + +I+ + A ALV M +
Sbjct: 156 SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215
Query: 431 GIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKA 490
G + Y ++++G G+ + L + +++++ P ++ Y +I+ V+ A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 491 LEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRA 550
L + M + GI+ N+ TY+ LI W++ + D++ + P+VV ++ +I A
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 551 FCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPT 610
F G + A + EM K P T+ +I+GF + A +F++M C P
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 611 VHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 670
V T+N LI G + +++++ +E+ EM+ G+ N TYTT++HG+ + A F
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 671 KLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRG 730
++ ++G+ D+ TY LL C +G++++AL V + + K+ + + YNI+I+G + G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 731 DVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
V + DL + +GV+P+V TYT+ ++
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 213/452 (47%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N + + A M G +P + LIH EA++ V +M +G
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
+ LVTY I+V G K G+ + A ++ ++ +IY II A C +N+ A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
L +M+ +GI + Y+ ++ G + + E +P+++++ LI+ +
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
K GK+ +A ++ M I ++ TYS LINGF +FE ++ P+V
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
V YN +I+ FC +D + + +EM + + T+ +IHGF +A E A +F
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661
M G +P + T++ L+ GL ++E A+ + + + + + P+ +TY ++ G G
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
++ F L +G++ +V TY ++ C+ G + A A+ +EM + ++ YN
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 722 LIDGWARRGDVWEAADLMQQMKQEGVQPDVHT 753
LI R GD +A+L+++M+ D T
Sbjct: 577 LIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 192/384 (50%), Gaps = 4/384 (1%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P +G++VN +RGD+ A + M IEP + +Y +I A +++ +AL+
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+M +GI ++VTY+ ++ G A + ER N + + +I A
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERL--KECGFSPS 470
+ + AE L +M + ID I Y +++G+ + ++ +FE + K+C P+
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPN 395
Query: 471 IISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFE 530
+++Y LI + K +V + +E+ + M G+ N TY+ LI+GF + ++ N VF+
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 531 DVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAG 590
++ DG+ PD++ Y+ ++ C G ++ A+ + + +Q+ + P T+ +I G +AG
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 591 EMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYT 650
+++ ++F + G P V T+ ++ G K E+A + EM G P+ TY
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 651 TIMHGYASLGDTGKAFEYFTKLRN 674
T++ + GD + E ++R+
Sbjct: 576 TLIRAHLRDGDKAASAELIREMRS 599
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 4/292 (1%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
ER P+ F +++ + + G + A + ++ M R I+P + Y++LI+ + + ++
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
EA M + ++VTY+ ++ GF K + F E +R N + Y +I
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
+ Q R + A+ + + M +G+ I Y +++DG G E L+VFE L+
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLK--LKDWANVF 526
P I +Y +I K GKV ++ + G+K N+ TY+ +++GF + LK+ A+
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD-- 556
Query: 527 AVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRT 578
A+F ++ +G PD YN +IRA G+ + +++EM+ R + T
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 230/481 (47%), Gaps = 35/481 (7%)
Query: 315 ARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVG 374
A + F +M + GI P +++YT +I + +D+ A + M+ G ++++V Y++++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 375 GFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTR------------------- 415
G K A ++ + + + Y ++Y C+ +
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 416 ----------------NMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVF 459
+E A LV+ + + G+ + +Y+ ++D + ++F
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 460 ERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKL 519
+R+ + G P+ ++Y LI+++ + GK+ AL M +G+K ++ Y+ LING K
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 520 KDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTF 579
D + +++ L+P VV Y +++ +C G +++A+ + EM + P+ TF
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 580 MPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTL 639
++ G RAG ++ A+++F+ M P T+N +I G E+ M KA E L EMT
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 640 AGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQS 699
GI P+ ++Y ++HG G +A + L EL+ Y LL C+ G+++
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 700 ALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
AL+V +EM + + + Y +LIDG + D L+++M G++PD YTS I+
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 760 A 760
A
Sbjct: 691 A 691
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 229/501 (45%), Gaps = 35/501 (6%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS +V +RG + A + + G+ P L VY LI + GR EA
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+M + G+ + VTYSI++ F + G + A + E + L+ Y ++I C+
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
++ AE + +M + ++ + Y +M GY G K L ++ + G +PSI +
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ L++ + G + A+++ M +K N TY+++I G+ + D + F +++
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
G+ PD Y +I C G A V + K + ++HGF R G+++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
AL + M + G + + LI G ++ + + +L EM G+ P++ YT+++
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSG----------RMQSALAV 703
+ GD +AF + + NEG + TY A++ CK+G +MQ +V
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 704 -------------TK-EMSAQK-----------IPRNTFVYNILIDGWARRGDVWEAADL 738
TK E+ QK + NT YN+LI G+ R+G + EA++L
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 739 MQQMKQEGVQPDVHTYTSFIN 759
+ +M +GV PD TYT+ IN
Sbjct: 810 ITRMIGDGVSPDCITYTTMIN 830
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 218/453 (48%), Gaps = 2/453 (0%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N + + GD+ A M + +EPT+ YT+L+ Y + +AL +M +G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
I S+ T++ ++ G + G A F E E + N + Y +I C+ +M +A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
+++M E+GI Y ++ G + G + + + L + + I Y L++ +
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
+ GK+ +AL V + M G+ ++ Y +LI+G LK KD F + +++ GLKPD
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
V+Y ++I A G+ A I M E P T+ +I+G +AG + A +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 602 MRRSGCIPTVHTFNALILGLVE-KRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLG 660
M+ +P T+ + L + + M+KA+E L L G+ N TY ++ G+ G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 661 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYN 720
+A E T++ +G+ D TY ++ C+ ++ A+ + M+ + I + YN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 721 ILIDGWARRGDVWEAADLMQQMKQEGVQPDVHT 753
LI G G++ +A +L +M ++G+ P+ T
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 218/516 (42%), Gaps = 36/516 (6%)
Query: 281 WQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRAR-GIEPTLHVYTNLIH 339
+ + S +E+ K S F L++ +Y R + F+ M + + P + + L+H
Sbjct: 141 FNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 200
Query: 340 AYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATL 399
R A+ M GI + Y+ ++ ++ + A + +
Sbjct: 201 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260
Query: 400 NAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVF 459
N + Y +I C+ + + A + +D+ + + + Y ++ G + E L +
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 460 ERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKL 519
+ + FSPS + L+ K GK+ +AL + K + G+ N+ Y+ LI+ K
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 520 KDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTF 579
+ + +F+ + + GL+P+ V Y+ +I FC G +D A+ + EM + + +
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 580 MPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTL 639
+I+G + G++ A M PTV T+ +L+ G K ++ KA+ + EMT
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 640 AGISPNEHTYTTIM-----------------------------------HGYASLGDTGK 664
GI+P+ +T+TT++ GY GD K
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
AFE+ ++ +G+ D ++Y L+ C +G+ A + N Y L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
G+ R G + EA + Q+M Q GV D+ Y I+
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 168/359 (46%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP+R + +M+ Y GDM +A + + M +GI P + Y LIH + EA
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V + + E++ + Y+ ++ GF + G E A +E +R L+ + YG +I
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ ++ + L+++M + G+ IY M+D + G+ ++ +++ + G P+ +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y +IN K G V++A + M+ N TY ++ K + +
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ GL + YN +IR FC G ++ A ++ M + P T+ +I+ R ++
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTT 651
K+A+E+++ M G P +N LI G +M KA E+ +EM G+ PN T T
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 579 FMPIIHGFARAGEMKRALEIFDMM-RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM 637
F +I + R+ + + +F MM + +P V T +AL+ GLV+ R A+E+ ++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 638 TLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRM 697
GI P+ + YT ++ L D +A E + G ++++ Y L+ CK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 698 QSALAVTKEMSAQK-----IPRNTFVYNI------------------------------L 722
A+ + K+++ + + T VY + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 723 IDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQRNGRSWSEAK 778
++G +RG + EA +L++++ GV P++ Y + I++ CK GR + EA+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK--------GRKFHEAE 387
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 35/252 (13%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
+R KP + M++ ++ GD A ++ M G P YT +I+ +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
EA KM+ + VTY G F + D ++A E H NAI+
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTY----GCFLDILTKGEVD--MQKAVELH---NAIL----- 780
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
+G+ A Y+M++ G+ G E+ + R+ G S
Sbjct: 781 ---------------------KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
P I+Y +IN + V KA+E+ M GI+ + Y+ LI+G + +
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Query: 529 FEDVMRDGLKPD 540
+++R GL P+
Sbjct: 880 RNEMLRQGLIPN 891
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 227/455 (49%), Gaps = 15/455 (3%)
Query: 319 FENMRARGIEPTLHVYTNLI---HAYAVGRDM------EEALSCVRKMKEEGIEMSLVT- 368
F +R + I TLH+ T A + D+ +E S V K +E ++ T
Sbjct: 77 FFTLRCKCI--TLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTS 134
Query: 369 --YSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQT-RNMERAEALVR 425
+ ++V ++++ + A A+ + Y ++ A ++ RN+ AE + +
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 426 DMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIG 485
+M E + + Y++++ G+ GN + L +F++++ G P++++Y LI+ Y K+
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 486 KVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYN 545
K+ ++ + M G++ N+ +Y+++ING + V V ++ R G D V YN
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 546 NIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRS 605
+I+ +C GN +A+ + EM + P+ T+ +IH +AG M RA+E D MR
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 606 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKA 665
G P T+ L+ G +K M +A +L EM G SP+ TY +++G+ G A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 666 FEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDG 725
++ +GL DV +Y +L C+S + AL V +EM + I +T Y+ LI G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 726 WARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ + EA DL ++M + G+ PD TYT+ INA
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 233/494 (47%), Gaps = 18/494 (3%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +++ + G++ A F+ M +G P + Y LI Y R +++
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+R M +G+E +L++Y++++ G + G + E R +L+ + Y +I C+
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
N +A + +M G+ + Y ++ GN + + ++++ G P+ +
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y L++ +++ G +++A V + M +G ++ TY+ LING + AV ED+
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
GL PDVV Y+ ++ FC ++D A+ + +EM ++ +P + T+ +I GF K
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A ++++ M R G P T+ ALI + +EKA+++ +EM G+ P+ TY+ ++
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 654 HGYASLGDTGKAFEYFTKL-RNEGLELDVFTYEALLKAC---------------CKSGRM 697
+G T +A KL E + DV TY L++ C C G M
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDV-TYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 698 QSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
A V + M + + YNI+I G R GD+ +A L ++M + G T +
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 758 INAC-KCSKSNQRN 770
+ A K K N+ N
Sbjct: 682 VKALHKEGKVNELN 695
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 224/464 (48%), Gaps = 1/464 (0%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVG-RDMEEALSCVRKM 357
F L+V Y+R + +A +A G P + Y ++ A R++ A + ++M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 358 KEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNM 417
E + ++ TY+I++ GF GN + A F++ + + N + Y +I C+ R +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 418 ERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCL 477
+ L+R M +G++ + Y+++++G G ++ V + G+S ++Y L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 478 INLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGL 537
I Y K G +AL + M G+ ++ TY+ LI+ K + + + GL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 538 KPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALE 597
P+ Y ++ F G M+ A +++EM P+ T+ +I+G G+M+ A+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 598 IFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYA 657
+ + M+ G P V +++ ++ G +++A+ + EM GI P+ TY++++ G+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 658 SLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTF 717
T +A + + ++ GL D FTY AL+ A C G ++ AL + EM + + +
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 718 VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINAC 761
Y++LI+G ++ EA L+ ++ E P TY + I C
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 213/473 (45%), Gaps = 15/473 (3%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ + +++N R G M M RG Y LI Y + +AL
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+M G+ S++TY+ ++ K GN A + ++ + R N Y ++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
Q M A ++R+M + G + Y+ +++G+ + G E + V E +KE G SP ++
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
SY +++ + + V +AL V + M GIK + TYS LI GF + + ++E++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+R GL PD Y +I A+C G++++A+ + EM ++ P T+ +I+G +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 593 KRALEIFDMMRRSGCIP---TVHTF------------NALILGLVEKRQMEKAIEILDEM 637
+ A + + +P T HT +LI G K M +A ++ + M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 638 TLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRM 697
P+ Y ++HG+ GD KA+ + ++ G L T AL+KA K G++
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 698 QSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPD 750
+V + +L++ R G++ D++ +M ++G P+
Sbjct: 692 NELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 217/465 (46%), Gaps = 4/465 (0%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+MVN + G M + ++ +G+ P + Y LI AY+ MEEA + M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
+G + TY+ ++ G K G E A F E + ++ Y +++ C+ ++
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
E + DM + + + MM +T GN +K L+ F +KE G P + Y LI
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
Y + G +S A+ + M G ++ TY+ +++G K K +F ++ L
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD +I C +GN+ A+ + ++M+++R R T+ ++ GF + G++ A EI
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
+ M +PT +++ L+ L K + +A + DEM I P +++ GY
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQK---IPRN 715
G+ + K+ +EG D +Y L+ + M A + K+M ++ +P +
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP-D 656
Query: 716 TFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
F YN ++ G+ R+ + EA ++++M + GV PD TYT IN
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 216/444 (48%), Gaps = 1/444 (0%)
Query: 333 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEA 392
V+ LI Y R + EA ++ +G +S+ + ++G ++G E A ++E
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 393 KERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNE 452
+N ++ A C+ ME+ + ++E+G+ I Y+ ++ Y+ G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 453 EKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSML 512
E+ + + GFSP + +Y +IN K GK +A EV M SG+ + TY L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 513 INGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERH 572
+ K D VF D+ + PD+V +++++ F GN+D+A+ +++
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 573 RPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIE 632
P + + +I G+ R G + A+ + + M + GC V T+N ++ GL +++ + +A +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 633 ILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACC 692
+ +EMT + P+ +T T ++ G+ LG+ A E F K++ + + LDV TY LL
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 693 KSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVH 752
K G + +A + +M +++I Y+IL++ +G + EA + +M + ++P V
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 753 TYTSFINACKCSKSNQRNGRSWSE 776
S I C N +G S+ E
Sbjct: 587 ICNSMIKG-YCRSGNASDGESFLE 609
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 199/424 (46%), Gaps = 37/424 (8%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQ-----------------------------------T 318
P + ++N + G RA++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 319 FENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAK 378
F +MR+R + P L +++++ + ++++AL +KE G+ V Y+I++ G+ +
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 379 MGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDI 438
G A + E ++ ++ + Y I++ C+ + + A+ L +M E +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 439 YHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMK 498
+++DG+ +GN + + +F+++KE +++Y L++ + K+G + A E+ M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 499 SSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMD 558
S I +YS+L+N A F V+++++ +KP V++ N++I+ +C GN
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 559 RAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMM--RRSGCIPTVHTFNA 616
+++M E P ++ +I+GF R M +A + M + G +P V T+N+
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 617 LILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEG 676
++ G + QM++A +L +M G++P+ TYT +++G+ S + +AF ++ G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 677 LELD 680
D
Sbjct: 723 FSPD 726
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 2/355 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P F M++ + R G++ +A F +++ G+ P +YT LI Y + A++
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+M ++G M +VTY+ I+ G K AD F E ER ++ +I C+
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
N++ A L + M+E+ I + Y+ ++DG+ +G+ + ++ + P+ IS
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y L+N G +++A V M S IK + + +I G+ + + ++ + E ++
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERH--RPTSRTFMPIIHGFARAGE 591
+G PD + YN +I F NM +A +VK+M++E+ P T+ I+HGF R +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 592 MKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNE 646
MK A + M G P T+ +I G V + + +A I DEM G SP++
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 181/424 (42%), Gaps = 18/424 (4%)
Query: 337 LIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERH 396
+IH + +A SC+ +M I G +++ + D F
Sbjct: 119 MIHILVRSGRLSDAQSCLLRM-------------IRRSGVSRLEIVNSLDSTFSNCGS-- 163
Query: 397 ATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCL 456
N ++ +I Q R + A + +G ID + ++ IG E
Sbjct: 164 ---NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 457 IVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGF 516
V++ + G ++ + ++N K GK+ K ++ G+ ++ TY+ LI+ +
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 517 LKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTS 576
F + + G P V YN +I C G +RA + EM + P S
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 577 RTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDE 636
T+ ++ + G++ ++F MR +P + F++++ ++KA+ +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 637 MTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGR 696
+ AG+ P+ YT ++ GY G A ++ +G +DV TY +L CK
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 697 MQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTS 756
+ A + EM+ + + +++ ILIDG + G++ A +L Q+MK++ ++ DV TY +
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 757 FINA 760
++
Sbjct: 521 LLDG 524
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 2/273 (0%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 366
+R + A + F M R + P + T LI + +++ A+ +KMKE+ I + +
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
VTY+ ++ GF K+G+ + A + + + I Y ++ A C ++ A + +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 427 MEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
M + I + I + M+ GY GN E++ GF P ISY LI + +
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 487 VSKALEVSKVMK--SSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
+SKA + K M+ G+ ++ TY+ +++GF + V ++ G+ PD Y
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSR 577
+I F N+ A I EM + P +
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 575 TSRTFMPIIHGFARAGEMKRALE-IFDMMRRSG----------------CIPTVHTFNAL 617
TS + +IH R+G + A + M+RRSG C F+ L
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL 171
Query: 618 ILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGL 677
I V+ R++ +A E + G + + ++ +G A+ + ++ G+
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGV 231
Query: 678 ELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAAD 737
++V+T ++ A CK G+M+ ++ + + + YN LI ++ +G + EA +
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 738 LMQQMKQEGVQPDVHTYTSFINA-CK 762
LM M +G P V+TY + IN CK
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCK 317
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 227/461 (49%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+M+N + R A + G EP + LI + + EA+ V +M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + +VTY+ IV G + G+ A + +ER+ + Y II + C+ ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A +L ++ME +GI + + Y+ ++ G G ++ + + P++I++ L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+++ K GK+ +A E+ K M + GI N+ TY+ L++G+ + + + ++R+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD+V + ++I+ +C + +D + + + + K + T+ ++ GF ++G++K A E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M G +P V T+ L+ GL + ++EKA+EI +++ + + YTTI+ G
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G A+ F L +G++ +V TY ++ CK G + A + ++M N
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
YN LI R GD+ +A L+++MK G D + I+
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 204/432 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P F ++ G + A + M G +P + Y ++++ D AL
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+RKM+E ++ + TYS I+ + G +AA F+E + + + + Y +++ C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ L++DM I + +++++D + G ++ +++ + G SP+II
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y L++ Y ++S+A + +M + ++ T++ LI G+ +K + VF ++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ GL + V Y+ +++ FC G + A + +EM P T+ ++ G G++
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
++ALEIF+ +++S + + +I G+ + ++E A + + G+ PN TYT +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G G +A K+ +G + TY L++A + G + ++ + +EM +
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 713 PRNTFVYNILID 724
+ ++ID
Sbjct: 575 SADASSIKMVID 586
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 138/290 (47%)
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
PS++ + + + + + L+ K ++ +GI HN+ T +++IN F + ++V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
VM+ G +PD +N +I+ G + A+ +V M + +P T+ I++G R
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
+G+ AL++ M V T++ +I L ++ AI + EM GI + T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
Y +++ G G + + + +V T+ LL K G++Q A + KEM
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+ I N YN L+DG+ + + EA +++ M + PD+ T+TS I
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 171/409 (41%), Gaps = 36/409 (8%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P + +VN R GD A M R ++ + Y+ +I + ++ A+S
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
++M+ +GI+ S+VTY+ +V G K G ++ R N I + ++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI------------IGNEEKC----- 455
+ ++ A L ++M GI I Y+ +MDGY + + KC
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 456 ------------------LIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVM 497
+ VF + + G + ++Y L+ + + GK+ A E+ + M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 498 KSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNM 557
S G+ ++ TY +L++G +FED+ + + +V+Y II C G +
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 558 DRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNAL 617
+ A ++ + + +P T+ +I G + G + A + M G P T+N L
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 618 ILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
I + + + ++++EM G S + + ++ S G+ K+F
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELDKSF 597
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 226/462 (48%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ +++N + RR + A M G EP + ++L++ Y + + EA++ V +M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
G + + VT++ ++ G A A + + + + YG ++ C+ + +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+ ME+ ++ + IY+ ++DG + + L +F+ ++ G P++++Y LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G+ S A + M I ++ T+S LI+ F+K +++++++ +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
P +V Y+++I FC +D A + + M + P T+ +I GF + ++ +E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M + G + T+N LI GL + + A EI EM G+ PN TY T++ G
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G KA F L+ +E ++TY +++ CK+G+++ + +S + + +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
YN +I G+ R+G EA L ++MK++G P+ Y + I A
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 213/452 (47%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N Y + A + M G +P + LIH + EA++ + +M +G
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
+ LVTY ++V G K G+ + A + + ++ +IY II C+ ++M+ A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
L ++ME +GI + Y ++ G + + E +P + ++ LI+ +
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
K GK+ +A ++ M I ++ TYS LINGF +FE ++ PDV
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
V YN +I+ FC ++ + + +EM + + T+ +I G +AG+ A EIF
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661
M G P + T+N L+ GL + ++EKA+ + + + + + P +TY ++ G G
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
++ F L +G++ DV Y ++ C+ G + A A+ KEM N+ YN
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 722 LIDGWARRGDVWEAADLMQQMKQEGVQPDVHT 753
LI R GD +A+L+++M+ G D T
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 188/393 (47%), Gaps = 4/393 (1%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P +G++VN +RGD A M +EP + +Y +I + M++AL+
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
++M+ +GI ++VTYS ++ G A + ER + + +I A
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIG--NEEKCLIVFERLKECGFSPS 470
+ + AE L +M + ID I Y +++G+ + +E K + F K C P
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC--FPD 395
Query: 471 IISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFE 530
+++Y LI + K +V + +EV + M G+ N TY++LI G + D +F+
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 531 DVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAG 590
+++ DG+ P+++ YN ++ C G +++A+ + + +Q+ + PT T+ +I G +AG
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 591 EMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYT 650
+++ ++F + G P V +N +I G K E+A + EM G PN Y
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 651 TIMHGYASLGDTGKAFEYFTKLRNEGLELDVFT 683
T++ GD + E ++R+ G D T
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 199/402 (49%), Gaps = 1/402 (0%)
Query: 365 SLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALV 424
S++ +S ++ AKM + E+ + N Y +I C+ + A A++
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 425 RDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
M + G + I +++GY + + + +++ G+ P+ +++ LI+
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 485 GKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
K S+A+ + M + G + ++ TY +++NG K D F + + + L+P V++Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
N II C +MD A+++ KEM+ + RP T+ +I G A + M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
P V TF+ALI V++ ++ +A ++ DEM I P+ TY+++++G+ +
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
A + F + ++ DV TY L+K CK R++ + V +EMS + + NT YNILI
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
G + GD A ++ ++M +GV P++ TY + ++ CK K
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 212/437 (48%), Gaps = 4/437 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ F +++ A + M A+G +P L Y +++ D + A +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ KM++ +E ++ Y+ I+ G K + + A + F+E + + N + Y ++I C
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
A L+ DM E I+ + + ++D + G + +++ + + PSI+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LIN + ++ +A ++ + M S ++ TY+ LI GF K K VF ++
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ GL + V YN +I+ G+ D A I KEM + P T+ ++ G + G++
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
++A+ +F+ ++RS PT++T+N +I G+ + ++E ++ ++L G+ P+ Y T+
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G+ G +A F +++ +G + Y L++A + G +++ + KEM +
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 713 PRNT----FVYNILIDG 725
+ V N+L DG
Sbjct: 603 AGDASTIGLVTNMLHDG 619
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
ER P F +++ + + G + A + ++ M R I+P++ Y++LI+ + + ++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
EA M + +VTY+ ++ GF K E F E +R N + Y +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
Q + + A+ + ++M +G+ I Y+ ++DG G EK ++VFE L+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
P+I +Y +I K GKV ++ + G+K ++ Y+ +I+GF + A+
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
F+++ DG P+ YN +IRA G+ + + ++KEM+
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 620 GLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLEL 679
GL E + ++ A+ + EM + P+ ++ ++ A + +++N G+
Sbjct: 56 GLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH 114
Query: 680 DVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLM 739
+ +TY L+ C+ ++ ALAV +M N + L++G+ + EA L+
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 740 QQMKQEGVQPDVHTYTSFINA 760
QM G QP+ T+ + I+
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHG 195
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 37/94 (39%)
Query: 279 ENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLI 338
+ W + + KP + M++ + R+G A F+ M+ G P Y LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 339 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSII 372
A D E + +++M+ G T ++
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 236/491 (48%), Gaps = 38/491 (7%)
Query: 306 YARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE-GIEM 364
Y + AR+ F++M G+ + + L++ Y + +E+AL + +M E +
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 365 SLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALV 424
VTY+ I+ +K G + K+ N + Y N++Y C+ +++ A +V
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 425 RDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
M++ + + Y+++++G G+ + L + + +K P +++Y LI+ ++
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 485 GKVSKALEVSKVMKSSGIK-----HNMK-------------------------------T 508
G +A ++ + M++ G+K HN+ T
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 509 YSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
Y LI +LK+ D + + ++ + G+K + + N I+ A C +D A +++
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 569 KERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQME 628
K T+ +I GF R ++++ALE++D M++ PTV TFN+LI GL + E
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 629 KAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALL 688
A+E DE+ +G+ P++ T+ +I+ GY G KAFE++ + + D +T LL
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 689 KACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 748
CK G + AL + ++ +T YN +I + + + EA DL+ +M+++G++
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 749 PDVHTYTSFIN 759
PD TY SFI+
Sbjct: 658 PDRFTYNSFIS 668
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 211/452 (46%), Gaps = 8/452 (1%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + ++ +++G + ++ +M+ G+ P Y NL++ Y ++EA
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
V MK+ + L TY+I++ G G+ + K + + Y +I +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKEC----GFSP 469
A L+ ME +G+ A +++ + + EEK V ++KE GFSP
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKW---LCKEEKREAVTRKVKELVDMHGFSP 414
Query: 470 SIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVF 529
I++Y LI Y K+G +S ALE+ + M GIK N T + +++ K + +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 530 EDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
+ G D V Y +I F +++A+ + EM+K + PT TF +I G
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
G+ + A+E FD + SG +P TFN++ILG ++ ++EKA E +E P+ +T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 650 TTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSA 709
+++G G T KA +F L E E+D TY ++ A CK +++ A + EM
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 710 QKIPRNTFVYNILIDGWARRGDVWEAADLMQQ 741
+ + + F YN I G + E +L+++
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 181/397 (45%), Gaps = 9/397 (2%)
Query: 369 YSIIVGGFAKMGNAEAADHWFEEA-----KERHATLNAIIYGNIIYAQCQTRNMERAEAL 423
+ I + + G A F++ K T N ++ G + Y + ++ A +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPS--SFSISSAREV 191
Query: 424 VRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERL-KECGFSPSIISYGCLINLYT 482
DM + G+ + ++++++GY + G E L + ER+ E +P ++Y ++ +
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251
Query: 483 KIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVV 542
K G++S E+ MK +G+ N TY+ L+ G+ KL F + E + + + PD+
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 543 LYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMM 602
YN +I C G+M + ++ M+ + +P T+ +I G G A ++ + M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 603 RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMT-LAGISPNEHTYTTIMHGYASLGD 661
G T N + L ++ + E + E+ + G SP+ TY T++ Y +GD
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
A E ++ +G++++ T +L A CK ++ A + + + Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 722 LIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
LI G+ R V +A ++ +MK+ + P V T+ S I
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 171/381 (44%), Gaps = 40/381 (10%)
Query: 438 IYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYG-CLINL--YTKIGKVSKALEVS 494
++ + + Y G L +F+++ P++++ LI L Y +S A EV
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 495 KVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRD-GLKPDVVLYNNIIRAFCG 553
M G+ N++T+++L+NG+ + + E ++ + + PD V YN I++A
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 554 MGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHT 613
G + ++ +M+K P T+ +++G+ + G +K A +I ++M+++ +P + T
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 614 FNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLR 673
+N LI GL M + +E++D M + P+ TY T++ G LG + +A + ++
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 674 NEGLEL------------------------------------DVFTYEALLKACCKSGRM 697
N+G++ D+ TY L+KA K G +
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 698 QSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
AL + +EM + I NT N ++D + + EA +L+ + G D TY +
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 758 INACKCSKSNQRNGRSWSEAK 778
I + ++ W E K
Sbjct: 493 IMGFFREEKVEKALEMWDEMK 513
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Query: 574 PTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLV---EKRQMEKA 630
P+ F + + G+ AL+IF M R P + T N L++GLV + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 631 IEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNE-GLELDVFTYEALLK 689
E+ D+M G+S N T+ +++GY G A ++ +E + D TY +LK
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 690 ACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQP 749
A K GR+ + +M + N YN L+ G+ + G + EA +++ MKQ V P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 750 DVHTYTSFINACKCSKSNQRNGRSWSEA 777
D+ TY IN C+ + R G +A
Sbjct: 309 DLCTYNILINGL-CNAGSMREGLELMDA 335
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 228/462 (49%), Gaps = 4/462 (0%)
Query: 301 LMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE 360
+++ R + +A MR + P + Y +I + G+++E+AL +MK
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 361 GIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERA 420
G SLVT+ I++ F K G + A + +E K + ++Y ++I C ++R
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 421 EALVRDMEEEGIDAPIDI-YHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLIN 479
+AL ++ E G D+P I Y+ ++ G+ +G ++ +FE + E G P++ +Y LI+
Sbjct: 267 KALFDEVLERG-DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 480 LYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKP 539
+GK +AL++ +M + N TY+++IN K A+ + E + + +P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 540 DVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERH--RPTSRTFMPIIHGFARAGEMKRALE 597
D + YN ++ C G++D A ++ M K+ P ++ +IHG + + +AL+
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 598 IFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYA 657
I+D++ T N L+ ++ + KA+E+ +++ + I N TYT ++ G+
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 658 SLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTF 717
G A K+R L+ VF Y LL + CK G + A + +EM +
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 718 VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
+NI+IDG + GD+ A L+ M + G+ PD+ TY+ IN
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 191/397 (48%), Gaps = 4/397 (1%)
Query: 287 AFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRD 346
ER P + ++ + + G + A + FE M RG+ P ++ YT LI
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 347 MEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGN 406
+EAL + M E+ E + VTY+II+ K G A E K+R + I Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 407 IIYAQCQTRNMERAEALVRDMEEEG--IDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKE 464
++ C +++ A L+ M ++ D + Y+ ++ G + L +++ L E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 465 CGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWAN 524
+ ++ L+N K G V+KA+E+ K + S I N TY+ +I+GF K N
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK-TGMLN 511
Query: 525 VFAVFEDVMR-DGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPII 583
V MR L+P V YN ++ + C G++D+A + +EMQ++ + P +F +I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 584 HGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS 643
G +AG++K A + M R+G P + T++ LI ++ +++AI D+M +G
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 644 PNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELD 680
P+ H +++ S G+T K E KL ++ + LD
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 213/494 (43%), Gaps = 37/494 (7%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + ++ + ++ +A + M+ G +L + LI A+ M+EA+
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+++MK G+E LV Y+ ++ GF G + F+E ER + AI Y +I C+
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
++ A + M E G+ + Y ++DG +G ++ L + + E P+ ++
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y +IN K G V+ A+E+ ++MK + + TY++L+ G D + ++
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 534 RDG--LKPDVVLYNNIIRAFCG-----------------------------------MGN 556
+D PDV+ YN +I C G+
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 557 MDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNA 616
+++A+ + K++ + S T+ +I GF + G + A + MR S P+V +N
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 617 LILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEG 676
L+ L ++ +++A + +EM P+ ++ ++ G GD A + G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 677 LELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAA 736
L D+FTY L+ K G + A++ +M + + + ++ +G+ +
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 737 DLMQQMKQEGVQPD 750
+L++++ + + D
Sbjct: 655 ELVKKLVDKDIVLD 668
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 188/429 (43%), Gaps = 38/429 (8%)
Query: 381 NAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYH 440
N E A ++ + E +N + ++ Q R A ++ M + G + ++
Sbjct: 87 NHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHN 146
Query: 441 MMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSS 500
+++ G K + + ++ P + SY +I + + ++ KALE++ MK S
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 501 GIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRA 560
G ++ T+ +LI+ F K +++ GL+ D+V+Y ++IR FC G +DR
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 561 IHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILG 620
+ E+ + P + T+ +I GF + G++K A EIF+ M G P V+T+ LI G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 621 L----------------VEKRQ-------------------MEKAIEILDEMTLAGISPN 645
L +EK + + A+EI++ M P+
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 646 EHTYTTIMHGYASLGDTGKA--FEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 703
TY ++ G + GD +A Y + + DV +Y AL+ CK R+ AL +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 704 TKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CK 762
+ + + NIL++ + GDV +A +L +Q+ + + TYT+ I+ CK
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 763 CSKSNQRNG 771
N G
Sbjct: 507 TGMLNVAKG 515
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 591 EMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYT 650
++K A+ +F SG N L+ LV R E A +M N + +
Sbjct: 53 QLKNAVSVFQQAVDSGS-SLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 651 TIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQ 710
++ Y + TG AF + G +V+ + LLK C++ A+++ +EM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 711 KIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQR 769
+ + F YN +I G+ ++ +A +L +MK G + T+ I+A CK K ++
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 770 NG 771
G
Sbjct: 232 MG 233
Score = 40.4 bits (93), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 69/152 (45%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+PS ++ +++ + G + +A + FE M+ P + + +I D++ A S
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ M G+ L TYS ++ F K+G + A +F++ + +A I +++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMD 444
++ LV+ + ++ I ++ +MD
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 224/492 (45%), Gaps = 38/492 (7%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 366
++ G M +A+ F+ M A G+ P Y +LI Y +++ + + +MK+ I +S
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
TY +V G G+ + A + +E N +IY +I Q A ++++
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 427 MEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
M+E+GI I Y+ ++ G + ++ + E G P+ +YG I+ Y + +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
+ A + K M+ G+ N + LIN + K + + ++ G+ D Y
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
++ +D A I +EM+ + P ++ +I+GF++ G M++A IFD M G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
P V +N L+ G ++EKA E+LDEM++ G+ PN TY TI+ GY GD +AF
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV----TKEMSAQKIPRNTFV---- 718
F +++ +GL D F Y L+ CC+ ++ A+ + K ++ P N +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 719 ------------------------------YNILIDGWARRGDVWEAADLMQQMKQEGVQ 748
YNI+ID + G++ A +L QM+ +
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 749 PDVHTYTSFINA 760
P V TYTS +N
Sbjct: 838 PTVITYTSLLNG 849
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 214/477 (44%), Gaps = 35/477 (7%)
Query: 320 ENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKM 379
E+M +G+ P + Y LI + +E+A S + +M G+ + TYS+++ G K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 380 GNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIY 439
NA+AA E + +Y I + ME+A+AL M G+ Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 440 HMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKS 499
+++GY N + + +K+ S +YG ++ G + A + K M +
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 500 SGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDR 559
SG + N+ Y+ LI FL+ + + V +++ G+ PD+ YN++I MD
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 560 AIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPT--------- 610
A + EM + +P + T+ I G+ A E A + MR G +P
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 611 --------------------------VHTFNALILGLVEKRQMEKAIEILDEMTLAGISP 644
T+ L+ GL + +++ A EI EM GI+P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 645 NEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVT 704
+ +Y +++G++ LG+ KA F ++ EGL +V Y LL C+SG ++ A +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 705 KEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINAC 761
EMS + + N Y +IDG+ + GD+ EA L +MK +G+ PD YT+ ++ C
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 229/507 (45%), Gaps = 49/507 (9%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 366
+R GD A + + M+ +GI P + Y +LI + + M+EA S + +M E G++ +
Sbjct: 466 SRFGD---AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
TY + G+ + +AD + +E +E N ++ +I C+ + A + R
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 427 MEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
M ++GI Y ++M+G + +F ++ G +P + SYG LIN ++K+G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
+ KA + M G+ N+ Y+ML+ GF + + + +++ GL P+ V Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
II +C G++ A + EM+ + P S + ++ G R +++RA+ IF ++ G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-G 761
Query: 607 CIPTVHTFNALI-----LG----------------------------------LVEKRQM 627
C + FNALI G L ++ +
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 628 EKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEAL 687
E A E+ +M A + P TYT++++GY +G + F F + G+E D Y +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 688 LKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI-----LIDGWARRGDVWEAADLMQQM 742
+ A K G AL + +M A+ + +I L+ G+A+ G++ A +M+ M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 743 KQEGVQPDVHTYTSFINACKCSKSNQR 769
+ PD T IN C SNQR
Sbjct: 942 VRLQYIPDSATVIELINE-SCISSNQR 967
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 224/527 (42%), Gaps = 36/527 (6%)
Query: 268 REFRKAVETQPENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGI 327
+EFR A + S + P + + ++++ + + A+ M + G+
Sbjct: 249 KEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 328 EPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADH 387
H Y+ LI GR+ + A V +M GI + Y + +K G E A
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 388 WFE-----------------------------------EAKERHATLNAIIYGNIIYAQC 412
F+ E K+R+ ++ YG ++ C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +++ A +V++M G + IY ++ + + V + +KE G +P I
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
Y LI +K ++ +A M +G+K N TY I+G+++ ++A+ +++
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
G+ P+ VL +I +C G + A + M + ++T+ +++G + ++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A EIF MR G P V ++ LI G + M+KA I DEM G++PN Y +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G+ G+ KA E ++ +GL + TY ++ CKSG + A + EM + +
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
++FVY L+DG R DV A + K+ G + + IN
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALIN 774
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 221/506 (43%), Gaps = 23/506 (4%)
Query: 278 PENWQAVVSAFERI--KKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYT 335
E W ++V + K FG++ + Y +G + A F + + P L
Sbjct: 131 AEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCK 190
Query: 336 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAA-DHWFEEAKE 394
L+ A ++ + M E + + TY +++ + GN + D F+ KE
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 395 -RHATLNA-------------------IIYGNIIYAQCQTRNMERAEALVRDMEEEGIDA 434
R ATLN Y +I C+ + +E A++L+ +M+ G+
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 435 PIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVS 494
Y +++DG N + + + G + Y C I + +K G + KA +
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 495 KVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGM 554
M +SG+ + Y+ LI G+ + K+ + + ++ + + Y +++ C
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 555 GNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTF 614
G++D A +IVKEM RP + +I F + A+ + M+ G P + +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 615 NALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRN 674
N+LI+GL + ++M++A L EM G+ PN TY + GY + A +Y ++R
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 675 EGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWE 734
G+ + L+ CK G++ A + + M Q I + Y +L++G + V +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 735 AADLMQQMKQEGVQPDVHTYTSFINA 760
A ++ ++M+ +G+ PDV +Y IN
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLING 636
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 205/449 (45%), Gaps = 11/449 (2%)
Query: 284 VVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAV 343
+V E KP+ +G ++ Y + A + + MR G+ P + T LI+ Y
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 344 GRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAII 403
+ EA S R M ++GI TY++++ G K + A+ F E + + +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 404 YGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLK 463
YG +I + NM++A ++ +M EEG+ + IY+M++ G+ G EK + + +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 464 ECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWA 523
G P+ ++Y +I+ Y K G +++A + MK G+ + Y+ L++G +L D
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 524 NVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERH----RPTSRTF 579
+F + G +N +I G + ++ + +P T+
Sbjct: 750 RAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 580 MPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTL 639
+I + G ++ A E+F M+ + +PTV T+ +L+ G + + + + DE
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 640 AGISPNEHTYTTIMHGYASLGDTGKAF----EYFTK-LRNEGLELDVFTYEALLKACCKS 694
AGI P+ Y+ I++ + G T KA + F K ++G +L + T ALL K
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 695 GRMQSALAVTKEMS-AQKIPRNTFVYNIL 722
G M+ A V + M Q IP + V ++
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 175/365 (47%), Gaps = 35/365 (9%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P +G+++N +++ G+M +A F+ M G+ P + +Y L+ + ++E+A
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ +M +G+ + VTY I+ G+ K G+ A F+E K + ++ +Y ++ C+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS----P 469
++ERA + ++G + ++ +++ G E V RL + F P
Sbjct: 745 LNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 470 SIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVF 529
+ ++Y +I+ K G + A E+ M+++ + + TY+ L+NG+ K+ A +F VF
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 530 EDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
++ + G++PD ++Y+ II AF G +A+ +V +M FA
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM------------------FA-- 903
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
K A++ GC ++ T AL+ G + +ME A ++++ M P+ T
Sbjct: 904 ---KNAVD-------DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Query: 650 TTIMH 654
+++
Sbjct: 954 IELIN 958
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 10/268 (3%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +++ Y + GD+ A + F+ M+ +G+ P VYT L+ D+E A++
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT- 753
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAE----AADHWFEEAKERHATLNAIIYGNIIY 409
+ ++G S ++ ++ K G E + + + +R N + Y +I
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 410 AQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSP 469
C+ N+E A+ L M+ + + Y +++GY +G + VF+ G P
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 470 SIISYGCLINLYTKIGKVSKALEVSKVMKS-----SGIKHNMKTYSMLINGFLKLKDWAN 524
I Y +IN + K G +KAL + M + G K ++ T L++GF K+ +
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 525 VFAVFEDVMRDGLKPDVVLYNNIIRAFC 552
V E+++R PD +I C
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELINESC 961
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 144/337 (42%), Gaps = 34/337 (10%)
Query: 450 GNEEKCLIVFERLKE-------------------CGFSPSIISYGCLINLYTKIGKVSKA 490
G+ EK L V ER+ E G S + +G L + Y G + +A
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA 170
Query: 491 LEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRA 550
+ V + + +L++ L+ + V++ ++ + DV Y+ +I A
Sbjct: 171 VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIA 230
Query: 551 FCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPT 610
C GN+ ++ + +KE T + AL++ + M G +P
Sbjct: 231 HCRAGNVQLGKDVLFKTEKEFRTATLN--------------VDGALKLKESMICKGLVPL 276
Query: 611 VHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFT 670
+T++ LI GL + +++E A +L EM G+S + HTY+ ++ G + A
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 671 KLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRG 730
++ + G+ + + Y+ + K G M+ A A+ M A + Y LI+G+ R
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 731 DVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSN 767
+V + +L+ +MK+ + +TY + + CS +
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKG-MCSSGD 432
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 210/434 (48%), Gaps = 2/434 (0%)
Query: 347 MEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEA-ADHWFEEAKERHATLNAIIYG 405
+ EA KM G+ +S+ + ++ + +K A A F E E N Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 406 NIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKEC 465
+I+ CQ ++ A L+ ME +G + Y +++GY G +K + E +K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 466 GFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANV 525
G P+ YG +I L +I K+++A E M GI + Y+ LI+GF K D
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 526 FAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHG 585
F ++ + PDV+ Y II FC +G+M A + EM + P S TF +I+G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 586 FARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPN 645
+ +AG MK A + + M ++GC P V T+ LI GL ++ ++ A E+L EM G+ PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 646 EHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTK 705
TY +I++G G+ +A + + GL D TY L+ A CKSG M A + K
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 706 EMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSK 765
EM + + +N+L++G+ G + + L+ M +G+ P+ T+ S + C +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ-YCIR 609
Query: 766 SNQRNGRSWSEAKC 779
+N + + + C
Sbjct: 610 NNLKAATAIYKDMC 623
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 215/464 (46%), Gaps = 35/464 (7%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + +VN Y R G++ + + E M+ +G++P ++Y ++I + EA
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+M +GI V Y+ ++ GF K G+ AA +F E R T + + Y II CQ
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+M A L +M +G++ P ++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLE-----------------------------------PDSVT 423
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ LIN Y K G + A V M +G N+ TY+ LI+G K D + + ++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+ GL+P++ YN+I+ C GN++ A+ +V E + + T+ ++ + ++GEM
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
+A EI M G PT+ TFN L+ G +E ++L+ M GI+PN T+ +++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
Y + A + + + G+ D TYE L+K CK+ M+ A + +EM +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
+ Y++LI G+ +R EA ++ QM++EG+ D + F
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 209/435 (48%)
Query: 326 GIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAA 385
G+ + Y +IH ++EA + M+ +G +++YS +V G+ + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 386 DHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDG 445
E K + N+ IYG+II C+ + AE +M +GI +Y ++DG
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 446 YTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHN 505
+ G+ F + +P +++Y +I+ + +IG + +A ++ M G++ +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 506 MKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVK 565
T++ LING+ K + F V +++ G P+VV Y +I C G++D A ++
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 566 EMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKR 625
EM K +P T+ I++G ++G ++ A+++ +G T+ L+ +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 626 QMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYE 685
+M+KA EIL EM G+ P T+ +M+G+ G + + +G+ + T+
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 686 ALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQE 745
+L+K C +++A A+ K+M ++ + + Y L+ G + ++ EA L Q+MK +
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 746 GVQPDVHTYTSFINA 760
G V TY+ I
Sbjct: 661 GFSVSVSTYSVLIKG 675
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 193/444 (43%), Gaps = 35/444 (7%)
Query: 281 WQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHA 340
W+ + + KP+ +G ++ R + A + F M +GI P VYT LI
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 341 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLN 400
+ D+ A +M I ++TY+ I+ GF
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF------------------------ 396
Query: 401 AIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFE 460
CQ +M A L +M +G++ + +++GY G+ + V
Sbjct: 397 -----------CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 461 RLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLK 520
+ + G SP++++Y LI+ K G + A E+ M G++ N+ TY+ ++NG K
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 521 DWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFM 580
+ + + GL D V Y ++ A+C G MD+A I+KEM + +PT TF
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 581 PIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLA 640
+++GF G ++ ++ + M G P TFN+L+ + ++ A I +M
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 641 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA 700
G+ P+ TY ++ G+ + +A+ F +++ +G + V TY L+K K + A
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 701 LAVTKEMSAQKIPRNTFVYNILID 724
V +M + + + +++ D
Sbjct: 686 REVFDQMRREGLAADKEIFDFFSD 709
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 224/441 (50%), Gaps = 1/441 (0%)
Query: 329 PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW 388
PT+ + L A A + E L+ ++M+ +GI S+ T SI++ F + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
+ + + +I+ ++ C + A LV M E G + + +++G +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKT 508
G +++ +R+ E GF P+ ++YG ++N+ K G+ + A+E+ + M+ IK +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 509 YSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
YS++I+G K N F +F ++ G K D++ YN +I FC G D ++++M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 569 KERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQME 628
K + P TF +I F + G+++ A ++ M + G P T+N+LI G ++ ++E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 629 KAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALL 688
+AI+++D M G P+ T+ +++GY E F ++ G+ + TY L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 689 KACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 748
+ C+SG+++ A + +EM ++++ + Y IL+DG G++ +A ++ ++++ ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 749 PDVHTYTSFINA-CKCSKSNQ 768
D+ Y I+ C SK +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDD 526
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 215/462 (46%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+M+N + R + A T + G EP ++ L++ + + EAL V +M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + +L+T + +V G G A + E N + YG ++ C++
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+R MEE I Y +++DG G+ + +F ++ GF II+Y LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G+ ++ + M I N+ T+S+LI+ F+K + +++M+ G+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
P+ + YN++I FC ++ AI +V M + P TF +I+G+ +A + LE+
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M G I T+N L+ G + ++E A ++ EM + P+ +Y ++ G
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G+ KA E F K+ +ELD+ Y ++ C + ++ A + + + + +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
YNI+I R+ + +A L ++M +EG PD TY I A
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 223/467 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P F ++N + A + + M G +PTL L++ + + +A+
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ +M E G + + VTY ++ K G A + +ER+ L+A+ Y II C
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +++ A L +ME +G A I Y+ ++ G+ G + + + + SP+++
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ + K GK+ +A ++ K M GI N TY+ LI+GF K + + +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G PD++ +N +I +C +D + + +EM + T+ ++ GF ++G++
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+ A ++F M P + ++ L+ GL + ++EKA+EI ++ + + + Y I
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+HG + A++ F L +G++LD Y ++ C+ + A + ++M+ +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
+ YNILI D AA+L+++MK G DV T IN
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 173/400 (43%), Gaps = 35/400 (8%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
ER K ++ ++++ + G + A F M +G + + Y LI + +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
+ +R M + I ++VT+S+++ F K G AD +E +R N I Y ++I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
C+ +E A +V M +G D I ++++++G
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING----------------------- 412
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
Y K ++ LE+ + M G+ N TY+ L+ GF + +
Sbjct: 413 ------------YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
F++++ ++PD+V Y ++ C G +++A+ I +++K + +M IIHG
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
A ++ A ++F + G +N +I L K + KA + +MT G +P+E T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALL 688
Y ++ + D A E ++++ G DV T + ++
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 144/309 (46%), Gaps = 3/309 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ F ++++ + + G + A Q + M RGI P Y +LI + +EEA+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
V M +G + ++T++I++ G+ K + F E R N + Y ++ CQ
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ +E A+ L ++M + I Y +++DG G EK L +F ++++ I
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y +I+ KV A ++ + G+K + + Y+++I+ + + +F +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+G PD + YN +IRA G + A +++EM K P + + ++ +GE+
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEM-KSSGFPADVSTVKMVINMLSSGELD 629
Query: 594 RALEIFDMM 602
++ DM+
Sbjct: 630 KSF--LDML 636
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 218/462 (47%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+M+N + R + A + G EP ++ LI+ + + EAL V +M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + L+T + +V G G A ++ E NA+ YG ++ C++
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+R MEE I Y +++DG G+ + +F ++ G + +II+Y LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G+ ++ + M I N+ T+S+LI+ F+K + ++++ G+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD + Y ++I FC ++D+A +V M + P RTF +I+G+ +A + LE+
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M G + T+N LI G E ++ A E+ EM + PN TY ++ G
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G++ KA E F K+ +ELD+ Y ++ C + ++ A + + + +
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
YNI+I G ++G + EA L ++M+++G PD TY I A
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 220/441 (49%), Gaps = 1/441 (0%)
Query: 329 PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW 388
PT+ ++ L A A + + L+ ++M+ +GI +L T SI++ F + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
+ + N I + +I C + A LV M E G + + +++G +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKT 508
G E + +++ +++ E G P+ ++YG ++N+ K G+ + A+E+ + M+ IK +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 509 YSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
YS++I+G K N F +F ++ G+ +++ YN +I FC G D ++++M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 569 KERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQME 628
K + P TF +I F + G+++ A E+ M G P T+ +LI G ++ ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 629 KAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALL 688
KA +++D M G PN T+ +++GY E F K+ G+ D TY L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 689 KACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 748
+ C+ G++ A + +EM ++K+P N Y IL+DG G+ +A ++ +++++ ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 749 PDVHTYTSFINA-CKCSKSNQ 768
D+ Y I+ C SK +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDD 526
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 220/467 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ F ++N G + A + + M G +P L L++ + EA+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ KM E G + + VTY ++ K G A + +ER+ L+A+ Y II C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +++ A L +ME +GI I Y++++ G+ G + + + + +P+++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ + K GK+ +A E+ K M GI + TY+ LI+GF K + + +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G P++ +N +I +C +D + + ++M + T+ +I GF G++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A E+F M P + T+ L+ GL + + EKA+EI +++ + + + Y I
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+HG + A++ F L +G++ V TY ++ CK G + A + ++M
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
+ + YNILI GD ++ L++++K+ G D T I+
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 170/365 (46%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
ER K ++ ++++ + G + A F M +GI + Y LI + +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
+ +R M + I ++VT+S+++ F K G A+ +E R + I Y ++I
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
C+ ++++A +V M +G D I ++++++GY + L +F ++ G
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
++Y LI + ++GK++ A E+ + M S + N+ TY +L++G + +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
FE + + ++ D+ +YN II C +D A + + + +P +T+ +I G +
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
G + A +F M G P T+N LI + K++++++E+ G S + T
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Query: 649 YTTIM 653
++
Sbjct: 616 IKMVI 620
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 217/462 (46%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ +M+N RR + A M G P++ +L++ + G + EA++ V +M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + VT++ +V G + A A E + + + YG +I C+ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+ ME+ I+A + IY ++D + + L +F + G P + +Y LI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G+ S A + M I N+ T++ LI+ F K +F+++++ +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
P++V YN++I FC +D A I M + P T+ +I+GF +A ++ +E+
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M R G + T+ LI G + + A + +M G+ PN TY T++ G
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G KA F L+ +E D++TY + + CK+G+++ + +S + + +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
YN +I G+ ++G EA L +MK++G PD TY + I A
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 217/464 (46%), Gaps = 6/464 (1%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS ++N + + A + M G +P +T L+H EA++
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
V +M +G + LVTY ++ G K G + A + + ++ + +IY +I + C+
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
R+++ A L +M+ +GI + Y ++ G + + E +P++++
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFL---KLKDWANVFAVFE 530
+ LI+ + K GK+ +A ++ M I N+ TY+ LINGF +L + +F +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM- 371
Query: 531 DVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAG 590
V +D L PDVV YN +I FC + + + ++M + + T+ +IHGF +A
Sbjct: 372 -VSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 591 EMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYT 650
+ A +F M G P + T+N L+ GL + ++EKA+ + + + + + P+ +TY
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 651 TIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQ 710
+ G G ++ F L +G++ DV Y ++ CK G + A + +M
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 711 KIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTY 754
++ YN LI R GD +A+L+++M+ D TY
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 207/432 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P F +V+ + A E M +G +P L Y +I+ + + AL+
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ KM++ IE +V YS ++ K + + A + F E + + Y ++I C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
A L+ DM E I+ + ++ ++D + G + +F+ + + P+I+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LIN + ++ +A ++ +M S ++ TY+ LINGF K K + +F D+
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
R GL + V Y +I F + D A + K+M + P T+ ++ G + G++
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
++A+ +F+ +++S P ++T+N + G+ + ++E ++ ++L G+ P+ Y T+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G+ G +A+ F K++ +G D TY L++A + G ++ + KEM + +
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 713 PRNTFVYNILID 724
+ Y ++ D
Sbjct: 587 AGDASTYGLVTD 598
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 194/402 (48%), Gaps = 1/402 (0%)
Query: 365 SLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALV 424
S+V +S ++ AKM + + E+ + + N Y +I C+ + A A++
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 425 RDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
M + G I + +++G+ + + + +++ E G+ P +++ L++ +
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 485 GKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
K S+A+ + + M G + ++ TY +ING K + + + + ++ DVV+Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
+ +I + C ++D A+++ EM + RP T+ +I G A + M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
P V TFN+LI ++ ++ +A ++ DEM I PN TY ++++G+ +
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
A + FT + ++ DV TY L+ CK+ ++ + + ++MS + + NT Y LI
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
G+ + D A + +QM +GV P++ TY + ++ CK K
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 136/292 (46%)
Query: 288 FERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM 347
ER P+ F +++ +A+ G + A + F+ M R I+P + Y +LI+ + + +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 348 EEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNI 407
+EA M + +VTY+ ++ GF K F + R N + Y +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 408 IYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGF 467
I+ Q + + A+ + + M +G+ I Y+ ++DG G EK ++VFE L++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFA 527
P I +Y + K GKV ++ + G+K ++ Y+ +I+GF K +
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 528 VFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTF 579
+F + DG PD YN +IRA G+ + ++KEM+ R + T+
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 160/343 (46%), Gaps = 2/343 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P + +++ G A + +M R I P + + +LI A+A + EA
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+M + I+ ++VTY+ ++ GF + A F + + + Y +I C
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + + L RDM G+ Y ++ G+ + + +VF+++ G P+I+
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y L++ K GK+ KA+ V + ++ S ++ ++ TY+++ G K + + +F +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
G+KPDV+ YN +I FC G + A + +M+++ P S T+ +I R G+
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKA-IEIL 634
+ E+ MR T+ L+ ++ +++K +E+L
Sbjct: 572 AASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGFLEVL 613
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 225/472 (47%), Gaps = 4/472 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS EF +++ A+ E M+ GI L+ Y+ I+ + + AL+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ KM + G E +VT S ++ G+ A ++ E + + +I+
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
A ALV M + G + Y +++G G+ + L + +++ +++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ +I+ K V A+++ M++ GI+ N+ TY+ LIN W++ + +++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+ P+VV +N +I AF G + A + +EM + P + T+ +I+GF +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A ++F M C+P + T+N LI G + +++E +E+ EM+ G+ N TYTTI+
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
G+ GD A F ++ + + D+ TY LL C G++ +AL + K + ++
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSK 765
N F+YN +I+G + G V EA DL + ++PDV TY + I+ CSK
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL-CSK 548
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 215/459 (46%), Gaps = 5/459 (1%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N Y + A + M G +P +T LIH + EA++ V +M + G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
+ LVTY +V G K G+ + A + + + N +I+ II + C+ R++E A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
L +ME +GI + Y+ +++ G + + E +P+++++ LI+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
K GK+ +A ++ + M I + TY++LINGF +F+ ++ P++
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
YN +I FC ++ + + +EM + + T+ II GF +AG+ A +F
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 602 MRRSGCIPT-VHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLG 660
M S +PT + T++ L+ GL +++ A+ I + + + N Y T++ G G
Sbjct: 459 MV-SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 661 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYN 720
G+A++ F L ++ DV TY ++ C +Q A + ++M N+ YN
Sbjct: 518 KVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Query: 721 ILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
LI R D +A+L+++M+ G D T + N
Sbjct: 575 TLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 137/319 (42%), Gaps = 35/319 (10%)
Query: 477 LINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDG 536
L N + I KV A+++ M S ++ ++ L++ K+ + V ++ E + G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 537 LKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 596
+ D+ Y+ I FC + A+ ++ +M K + P T +++G+ + + A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 597 EIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGY 656
+ D M G P TF LI GL + +A+ ++D+M G P+ TY T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 657 ASLGDTGKAF-----------------------------------EYFTKLRNEGLELDV 681
GD A + FT++ +G+ +V
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 682 FTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQ 741
TY +L+ C GR A + M +KI N +N LID + + G + EA L ++
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 742 MKQEGVQPDVHTYTSFINA 760
M Q + PD TY IN
Sbjct: 354 MIQRSIDPDTITYNLLING 372
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 7/283 (2%)
Query: 288 FERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM 347
E+ P+ F +++ + + G + A + E M R I+P Y LI+ + + +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 348 EEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNI 407
+EA + M + ++ TY+ ++ GF K E F E +R N + Y I
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 408 IYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGF 467
I Q + + A+ + + M + I Y +++ G G + L++F+ L++
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFA 527
+I Y +I K GKV +A + + S IK ++ TY+ +I+G +
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWD---LFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 528 VFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRA--IHIVKEMQ 568
+F + DG P+ YN +IRA + + DRA ++KEM+
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMR 597
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 220/452 (48%), Gaps = 3/452 (0%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 366
R G++ + ENM G P + T LI + +A + ++ G +
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
+TY++++ G+ K G A + + + + Y I+ + C + +++A ++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 427 MEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
M + + Y ++++ + + + +++ G +P +++Y L+N K G+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
+ +A++ M SSG + N+ T+++++ W + + D++R G P VV +N
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
+I C G + RAI I+++M + +P S ++ P++HGF + +M RA+E + M G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
C P + T+N ++ L + ++E A+EIL++++ G SP TY T++ G A G TGKA
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGW 726
+ ++R + L+ D TY +L+ + G++ A+ E I N +N ++ G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 727 ARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+ A D + M G +P+ +YT I
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 189/394 (47%), Gaps = 1/394 (0%)
Query: 285 VSAFERIK-KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAV 343
+S +R+ P + ++ G + +A + + M R P + YT LI A
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 344 GRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAII 403
+ A+ + +M++ G +VTY+++V G K G + A + + N I
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 404 YGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLK 463
+ I+ + C T AE L+ DM +G + ++++++ G + + + E++
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 464 ECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWA 523
+ G P+ +SY L++ + K K+ +A+E + M S G ++ TY+ ++ K
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 524 NVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPII 583
+ + + G P ++ YN +I G +AI ++ EM+ + +P + T+ ++
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 584 HGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS 643
G +R G++ A++ F R G P TFN+++LGL + RQ ++AI+ L M G
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 644 PNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGL 677
PNE +YT ++ G A G +A E +L N+GL
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 32/351 (9%)
Query: 442 MMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMK--- 498
++ G+ +G K + E L+ G P +I+Y +I+ Y K G+++ AL V M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 499 --------------SSGIKHNMK---------------TYSMLINGFLKLKDWANVFAVF 529
S +K M+ TY++LI + + +
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 530 EDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
+++ G PDVV YN ++ C G +D AI + +M +P T I+
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
G A ++ M R G P+V TFN LI L K + +AI+IL++M G PN +Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 650 TTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSA 709
++HG+ +A EY ++ + G D+ TY +L A CK G+++ A+ + ++S+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 710 QKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ YN +IDG A+ G +A L+ +M+ + ++PD TY+S +
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 10/234 (4%)
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
NN +R G ++ ++ M + P +I GF R G+ ++A +I +++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
SG +P V T+N +I G + ++ A+ +LD M+ +SP+ TY TI+ G +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQ 222
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
A E ++ DV TY L++A C+ + A+ + EM + + YN+L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQRNGRSWSEAK 778
G + G + EA + M G QP+V T+ + + CS GR W +A+
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS-MCS-----TGR-WMDAE 329
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 225/487 (46%), Gaps = 1/487 (0%)
Query: 281 WQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHA 340
W + +R P F +++N G ++ + M G PT+ Y ++H
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 341 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLN 400
Y + A+ + MK +G++ + TY++++ + + ++R N
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 401 AIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFE 460
+ Y +I + A L+ +M G+ ++ ++DG+ GN ++ L +F
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 461 RLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLK 520
++ G +PS +SYG L++ K + A MK +G+ TY+ +I+G K
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 521 DWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFM 580
+ ++ +DG+ PD+V Y+ +I FC +G A IV + + P +
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 581 PIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLA 640
+I+ R G +K A+ I++ M G TFN L+ L + ++ +A E + MT
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Query: 641 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA 700
GI PN ++ +++GY + G+ KAF F ++ G FTY +LLK CK G ++ A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597
Query: 701 LAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
K + A +T +YN L+ + G++ +A L +M Q + PD +TYTS I+
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 761 -CKCSKS 766
C+ K+
Sbjct: 658 LCRKGKT 664
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 217/504 (43%), Gaps = 38/504 (7%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + ++++Y ++G A + ++M+++G++ + Y LIH + +
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKE-----RHATLNAII----- 403
+R M++ I + VTY+ ++ GF+ G A E H T NA+I
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345
Query: 404 -------------------------YGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDI 438
YG ++ C+ + A M+ G+
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Query: 439 YHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMK 498
Y M+DG G ++ +++ + + G P I++Y LIN + K+G+ A E+ +
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 499 SSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMD 558
G+ N YS LI ++ ++E ++ +G D +N ++ + C G +
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 559 RAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALI 618
A ++ M + P + +F +I+G+ +GE +A +FD M + G PT T+ +L+
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 619 LGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLE 678
GL + + +A + L + + + Y T++ G+ KA F ++ +
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 679 LDVFTYEALLKACCKSGRMQSALAVTKEMSAQ-KIPRNTFVYNILIDGWARRGDVWEAAD 737
D +TY +L+ C+ G+ A+ KE A+ + N +Y +DG + G W+A
Sbjct: 646 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ-WKAGI 704
Query: 738 LM-QQMKQEGVQPDVHTYTSFINA 760
+QM G PD+ T + I+
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDG 728
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 200/428 (46%)
Query: 333 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEA 392
VY LI Y ++++L R M G S+ T + I+G K G + + +E
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 393 KERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNE 452
+R + + +I C + E++ L++ ME+ G I Y+ ++ Y G
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 453 EKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSML 512
+ + + + +K G + +Y LI+ + +++K + + M+ I N TY+ L
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 513 INGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERH 572
INGF + +++ GL P+ V +N +I GN A+ + M+ +
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 573 RPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIE 632
P+ ++ ++ G + E A + M+R+G T+ +I GL + +++A+
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 633 ILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACC 692
+L+EM+ GI P+ TY+ +++G+ +G A E ++ GL + Y L+ CC
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 693 KSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVH 752
+ G ++ A+ + + M + R+ F +N+L+ + G V EA + M+ M +G+ P+
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 753 TYTSFINA 760
++ IN
Sbjct: 545 SFDCLING 552
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 214/501 (42%), Gaps = 36/501 (7%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ F ++N Y G+ +A F+ M G PT Y +L+ G + EA
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
++ + + V Y+ ++ K GN A F E +R ++ Y ++I C+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 414 TRNMERAEALVRDMEEEGIDAPIDI-YHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
A ++ E G P + Y +DG G + + E++ G +P I+
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 720
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+ +I+ Y+++GK+ K ++ M + N+ TY++L++G+ K KD + F ++ +
Sbjct: 721 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 780
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ +G+ PD + ++++ C ++ + I+K TF +I GE+
Sbjct: 781 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 840
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A ++ +M G T +A++ L + +++ +L EM+ GISP Y +
Sbjct: 841 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900
Query: 653 MHGYASLGD--------------------------------TGKAFEYFTKLR---NEGL 677
++G +GD GKA E LR L
Sbjct: 901 INGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 960
Query: 678 ELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAAD 737
+ ++ L+ CCK+G + AL + MS + + YN+LI G +GD+ A +
Sbjct: 961 VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFE 1020
Query: 738 LMQQMKQEGVQPDVHTYTSFI 758
L ++MK +G + TY + I
Sbjct: 1021 LYEEMKGDGFLANATTYKALI 1041
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 217/538 (40%), Gaps = 71/538 (13%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ F +++ + G+ A + F M A+G+ P+ Y L+ + + A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+MK G+ + +TY+ ++ G K G + A E + + + Y +I C+
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ A+ +V + G+ IY ++ +G ++ + ++E + G + +
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ L+ K GKV++A E + M S GI N ++ LING+ + F+VF+++
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 534 RDGLKP-----------------------------------DVVLYNNIIRAFCGMGNMD 558
+ G P D V+YN ++ A C GN+
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 559 RAIHIVKEMQKERHRPTSRTFMPIIHGFAR------------------------------ 588
+A+ + EM + P S T+ +I G R
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 589 ------AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGI 642
AG+ K + + M G P + T NA+I G ++EK ++L EM
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 643 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALA 702
PN TY ++HGY+ D +F + + G+ D T +L+ C+S ++ L
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810
Query: 703 VTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ K + + + + +N+LI G++ A DL++ M G+ D T + ++
Sbjct: 811 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 159/337 (47%), Gaps = 38/337 (11%)
Query: 465 CGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWAN 524
C +PS+ Y LI +Y + G + +LE+ ++M G ++ T + ++ +K + +
Sbjct: 119 CNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 525 VFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIH 584
V++ +++++ + PDV +N +I C G+ +++ +++++M+K + PT T+ ++H
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 585 GFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISP 644
+ + G K A+E+ D M+ G V T+N LI L ++ K +L +M I P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 645 NEHTYTTIMHGYA-----------------------------------SLGDTGKAFEYF 669
NE TY T+++G++ S G+ +A + F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 670 TKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARR 729
+ +GL +Y LL CK+ A M + Y +IDG +
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 730 GDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
G + EA L+ +M ++G+ PD+ TY++ IN CK +
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 211/466 (45%), Gaps = 6/466 (1%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 366
R G + A + +E M G + L+ + + EA +R M +GI +
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
V++ ++ G+ G A F+E + YG+++ C+ ++ AE ++
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 427 MEEEGIDAPID--IYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
+ + A +D +Y+ ++ GN K + +F + + P +Y LI+ +
Sbjct: 604 LH--AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 485 GKVSKALEVSKVMKSSG-IKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVL 543
GK A+ +K ++ G + N Y+ ++G K W E + G PD+V
Sbjct: 662 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721
Query: 544 YNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMR 603
N +I + MG +++ ++ EM + P T+ ++HG+++ ++ + ++ +
Sbjct: 722 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 604 RSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTG 663
+G +P T ++L+LG+ E +E ++IL G+ + +T+ ++ + G+
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 664 KAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILI 723
AF+ + + G+ LD T +A++ ++ R Q + V EMS Q I + Y LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 724 DGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQ 768
+G R GD+ A + ++M + P ++ + A KC K+++
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 135/354 (38%), Gaps = 35/354 (9%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
M++ Y+R G + + M + P L Y L+H Y+ +D+ + R + G
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
I +T +V G + E + R ++ + +I C + A
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 844
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
LV+ M GI D M +++
Sbjct: 845 DLVKVMTSLGISLDKDTCDAM-----------------------------------VSVL 869
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDV 541
+ + ++ V M GI + Y LING ++ D F V E+++ + P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 542 VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
V + ++RA G D A +++ M K + PT +F ++H + G + ALE+ +
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHG 655
M G + ++N LI GL K M A E+ +EM G N TY ++ G
Sbjct: 990 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 228/465 (49%), Gaps = 5/465 (1%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + F +MV ++ + +M +A + + M++ I P+ + +I E AL
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
E I + I + F K G +AA + + +++ N + Y N++ A C+
Sbjct: 438 FNDSFESWIAHGFMCNKIFLL-FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+NM+ A ++ +M E+G++ Y +++DG+ +E+ V ++ F + +
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 474 YGCLINLYTKIGKVSKALE-VSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
Y +IN K+G+ SKA E + ++K + +Y+ +I+GF+K+ D + + ++
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+G P+VV + ++I FC MD A+ + EM+ + + +I GF + +M
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
K A +F + G +P V +N+LI G +M+ AI++ +M GIS + TYTT+
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G G+ A + +++L + G+ D + L+ K G+ A + +EM + +
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
N +Y+ +I G R G++ EA L +M ++G+ VH T F
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI---VHDDTVF 838
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 224/458 (48%), Gaps = 2/458 (0%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
+VN Y + ++ +A F M G+ P +++ ++ + +ME+A+ +MK
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
I S V ++ G K + EAA F ++ E + + I C+ ++ A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAAT 469
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLY 481
+ ++ ME++GI+ + Y+ MM + + N + +F + E G P+ +Y LI+ +
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 482 TKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDG-LKPD 540
K A +V M +S + N Y+ +ING K+ + + ++++++
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 541 VVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFD 600
YN+II F +G+ D A+ +EM + P TF +I+GF ++ M ALE+
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 601 MMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLG 660
M+ + + ALI G +K M+ A + E+ G+ PN Y +++ G+ +LG
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 661 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYN 720
A + + K+ N+G+ D+FTY ++ K G + A + E+ I + ++
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM 769
Query: 721 ILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+L++G +++G +A+ ++++MK++ V P+V Y++ I
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 212/411 (51%), Gaps = 10/411 (2%)
Query: 300 GLMVN----YYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVR 355
G M N + ++G + A + M +GIEP + Y N++ A+ ++M+ A S
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 356 KMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTR 415
+M E+G+E + TYSI++ GF K + + A + + N +IY II C+
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 416 NMERAEALVRDM-EEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISY 474
+A+ +++++ +E+ Y+ ++DG+ +G+ + + + + E G SP+++++
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 475 GCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMR 534
LIN + K ++ ALE++ MKS +K ++ Y LI+GF K D + +F ++
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 535 DGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKR 594
GL P+V +YN++I F +G MD AI + K+M + T+ +I G + G +
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 595 ALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMH 654
A +++ + G +P L+ GL +K Q KA ++L+EM ++PN Y+T++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Query: 655 GYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTK 705
G+ G+ +AF ++ +G+ D + L+ SGR++ A +K
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV-----SGRVEKPPAASK 854
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 223/471 (47%), Gaps = 10/471 (2%)
Query: 295 SRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCV 354
S+ + ++ + + G+M A + + M GI ++ T+L++ Y G ++ +AL
Sbjct: 309 SQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF 368
Query: 355 RKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQT 414
+M+EEG+ V +S++V F K E A ++ K ++++ +I +
Sbjct: 369 NRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKA 428
Query: 415 RNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTII----GNEEKCLIVFERLKECGFSPS 470
+ E A + D E I + M + ++ G + + +++ G P+
Sbjct: 429 ESPEAALEIFNDSFESWI-----AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 471 IISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFE 530
++ Y ++ + ++ + A + M G++ N TYS+LI+GF K KD N + V
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 531 DVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKE-RHRPTSRTFMPIIHGFARA 589
+ + + V+YN II C +G +A +++ + KE R+ + ++ II GF +
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
G+ A+E + M +G P V TF +LI G + +M+ A+E+ EM + + Y
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 650 TTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSA 709
++ G+ D A+ F++L GL +V Y +L+ G+M +A+ + K+M
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 710 QKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
I + F Y +IDG + G++ A+DL ++ G+ PD + +N
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 214/448 (47%), Gaps = 3/448 (0%)
Query: 315 ARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE-GIEMSLVTYSIIV 373
A + F + +RG EP +++ + A D+ AL +R+M+ + G+ S TY+ ++
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 374 GGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGID 433
F K GN E A +E ++ I +++ C+ + +A L MEEEG+
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 434 APIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEV 493
++ +M++ + EK + + R+K +PS + +I K ALE+
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 494 SKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCG 553
S I H + + F K + + + + G++P+VV YNN++ A C
Sbjct: 438 FNDSFESWIAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 554 MGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHT 613
M NMD A I EM ++ P + T+ +I GF + + + A ++ + M S
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 614 FNALILGLVEKRQMEKAIEILDEMTLAG-ISPNEHTYTTIMHGYASLGDTGKAFEYFTKL 672
+N +I GL + Q KA E+L + S + +Y +I+ G+ +GDT A E + ++
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 673 RNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDV 732
G +V T+ +L+ CKS RM AL +T EM + ++ + Y LIDG+ ++ D+
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 733 WEAADLMQQMKQEGVQPDVHTYTSFINA 760
A L ++ + G+ P+V Y S I+
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISG 704
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 142/317 (44%), Gaps = 35/317 (11%)
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
+ +A E+ M G+ + T +L+ L+ + +F VM G +PD +L++
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSR-TFMPIIHGFARAGEMKRALEIFDMMRRS 605
++A C ++ A+ +++EM+ + P S+ T+ +I F + G M+ A+ + D M
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 606 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKA 665
G +V +L+ G + ++ KA+++ + M G++P++ ++ ++ + + KA
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 666 FEYFTKLRNEGLELDVFTYEALLKAC---------------------------------- 691
E++ ++++ + +++ C
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 692 CKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDV 751
CK G++ +A + K M + I N YN ++ R ++ A + +M ++G++P+
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 752 HTYTSFINACKCSKSNQ 768
TY+ I+ +K Q
Sbjct: 520 FTYSILIDGFFKNKDEQ 536
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
E K P+ F ++N + + M A + M++ ++ L Y LI + DM+
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
A + ++ E G+ ++ Y+ ++ GF +G +AA +++ + + Y +I
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHM-MMDGYTIIGNEEKCLIVFERLKECGF 467
+ N+ A L ++ + GI P +I HM +++G + G K + E +K+
Sbjct: 738 DGLLKDGNINLASDLYSELLDLGI-VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLING 515
+P+++ Y +I + + G +++A + M GI H+ +++L++G
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/556 (25%), Positives = 247/556 (44%), Gaps = 73/556 (13%)
Query: 276 TQPENWQAVVSAFERIKK---PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLH 332
+ +Q AF+ + K P F +N + + G + A + F M G+ P +
Sbjct: 250 VRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVV 309
Query: 333 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEA 392
+ +I + +EA KM E G+E +L+TYSI+V G + A +E
Sbjct: 310 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 369
Query: 393 KERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNE 452
++ N I+Y N+I + + ++ +A + M +G+ Y+ ++ GY G
Sbjct: 370 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA 429
Query: 453 EKCLIVFERLKECGFS------PSIISYGC-----------------------------L 477
+ + + + GF+ S+I C L
Sbjct: 430 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 489
Query: 478 INLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGL 537
I+ K GK SKALE+ + G + +T + L++G + F + ++++ G
Sbjct: 490 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 549
Query: 538 KPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALE 597
D V YN +I CG +D A + EM K +P + T+ +I G +++ A++
Sbjct: 550 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 609
Query: 598 IFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM-------------------- 637
+D +R+G +P V+T++ +I G + + E+ E DEM
Sbjct: 610 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 669
Query: 638 -----TLA----------GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVF 682
++A GISPN TYT+++ G + + +A F ++R EGLE +VF
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729
Query: 683 TYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQM 742
Y AL+ K G+M + +EM ++ + N Y ++I G+AR G+V EA+ L+ +M
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Query: 743 KQEGVQPDVHTYTSFI 758
+++G+ PD TY FI
Sbjct: 790 REKGIVPDSITYKEFI 805
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 222/502 (44%), Gaps = 71/502 (14%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS+ +++ R + + + F+ + +G+ P ++++T I+A+ G +EEA+
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
KM+E G+ ++VT++ ++ G G + A + E+
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK---------------------- 333
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
M E G++ + Y +++ G T V + + + GF P++I
Sbjct: 334 -------------MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 380
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y LI+ + + G ++KA+E+ +M S G+ TY+ LI G+ K N + ++++
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRP------------------- 574
G + + ++I C D A+ V EM P
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 500
Query: 575 ----------------TSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALI 618
+RT ++HG AG++ A I + GC+ ++N LI
Sbjct: 501 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 560
Query: 619 LGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLE 678
G K+++++A LDEM G+ P+ +TY+ ++ G ++ +A +++ + G+
Sbjct: 561 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 620
Query: 679 LDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADL 738
DV+TY ++ CCK+ R + EM ++ + NT VYN LI + R G + A +L
Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Query: 739 MQQMKQEGVQPDVHTYTSFINA 760
+ MK +G+ P+ TYTS I
Sbjct: 681 REDMKHKGISPNSATYTSLIKG 702
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 176/384 (45%), Gaps = 36/384 (9%)
Query: 426 DMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIG 485
D+ +G+ + ++ ++ + G E+ + +F +++E G +P+++++ +I+ G
Sbjct: 263 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322
Query: 486 KVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYN 545
+ +A + M G++ + TYS+L+ G + K + + V +++ + G P+V++YN
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 546 NIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRS 605
N+I +F G++++AI I M + TS T+ +I G+ + G+ A + M
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 442
Query: 606 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKA 665
G +F ++I L + A+ + EM L +SP TT++ G G KA
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 666 FEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQ-----KIPRNTFV-- 718
E + + N+G +D T ALL C++G++ A + KE+ + ++ NT +
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 719 ----------------------------YNILIDGWARRGDVWEAADLMQQMKQEGVQPD 750
Y+ILI G V EA K+ G+ PD
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 751 VHTYTSFINACKCSKSNQRNGRSW 774
V+TY+ I+ C C G+ +
Sbjct: 623 VYTYSVMIDGC-CKAERTEEGQEF 645
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 199/435 (45%), Gaps = 20/435 (4%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ ++ Y + G A + + M + G +T++I + AL V +M
Sbjct: 416 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 475
Query: 359 EEGIEMSLVTYSIIVGGFAKMG-NAEAADHWFEEAKERHA----TLNAIIYGNIIYAQCQ 413
+ + ++ G K G +++A + WF+ + T NA+++G C+
Sbjct: 476 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG-----LCE 530
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
++ A + +++ G Y+ ++ G ++ + + + + G P +
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y LI + KV +A++ K +G+ ++ TYS++I+G K + F+++M
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
++P+ V+YN++IRA+C G + A+ + ++M+ + P S T+ +I G + ++
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A +F+ MR G P V + ALI G + QM K +L EM + PN+ TYT ++
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
GYA G+ +A ++R +G+ D TY+ + K G + A + E +
Sbjct: 771 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN----- 825
Query: 714 RNTFVYNILIDGWAR 728
Y +I+GW +
Sbjct: 826 -----YAAIIEGWNK 835
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 124/265 (46%)
Query: 296 RREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVR 355
R + +++ + + A + M RG++P + Y+ LI +EEA+
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 612
Query: 356 KMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTR 415
K G+ + TYS+++ G K E +F+E ++ N ++Y ++I A C++
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 416 NMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYG 475
+ A L DM+ +GI Y ++ G +II E+ ++FE ++ G P++ Y
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 476 CLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRD 535
LI+ Y K+G++ K + + M S + N TY+++I G+ + + + ++
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 536 GLKPDVVLYNNIIRAFCGMGNMDRA 560
G+ PD + Y I + G + A
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 10/226 (4%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + +M++ + ++ F+ M ++ ++P VY +LI AY + AL
Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
MK +GI + TY+ ++ G + + E A FEE + N Y +I +
Sbjct: 681 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 740
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
M + E L+R+M + + Y +M+ GY GN + + ++E G P I+
Sbjct: 741 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 800
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKL 519
Y I Y K G V +A + S + + Y+ +I G+ KL
Sbjct: 801 YKEFIYGYLKQGGVLEAFKGS----------DEENYAAIIEGWNKL 836
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 595 ALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMH 654
AL++F ++ G P+ T N L+ LV + +K E D + G+SP+ + +TT ++
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 281
Query: 655 GYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPR 714
+ CK G+++ A+ + +M +
Sbjct: 282 AF-----------------------------------CKGGKVEEAVKLFSKMEEAGVAP 306
Query: 715 NTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
N +N +IDG G EA ++M + G++P + TY+ +
Sbjct: 307 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ + +++ Y + G M + M ++ + P YT +I YA ++ EA
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAA 385
+ +M+E+GI +TY + G+ K G A
Sbjct: 785 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 225/467 (48%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P F +VN + G + A + M P L + LI+ + + EAL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ +M E G + VTY ++ K GN+ A F + +ER+ + + Y +I + C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + + A +L +ME +GI A + Y ++ G G + + + P ++
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+++ K GK+ +A E+ M + GI + TY+ LI+GF K +F+ +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G +PD+V Y+ +I ++C +D + + +E+ + P + T+ ++ GF ++G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A E+F M G P+V T+ L+ GL + ++ KA+EI ++M + ++ Y I
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+HG + A+ F L ++G++ DV TY ++ CK G + A + ++M
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
+ F YNILI + + +L+++MK G D T I+
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 212/460 (46%)
Query: 301 LMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE 360
+M+N Y R+ + A G EP ++ L++ + + + EA++ V +M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 361 GIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERA 420
LVT S ++ G G A + E + + YG ++ C++ N A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 421 EALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
L R MEE I A + Y +++D G+ + L +F ++ G +++Y LI
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 481 YTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPD 540
GK ++ + M I ++ T+S LI+ F+K ++ +++ G+ PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 541 VVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFD 600
+ YN++I FC + A + M + P T+ +I+ + +A + + +F
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 601 MMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLG 660
+ G IP T+N L+LG + ++ A E+ EM G+ P+ TY ++ G G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 661 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYN 720
+ KA E F K++ + L + Y ++ C + ++ A ++ +S + + + YN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 721 ILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
++I G ++G + EA L ++MK++G PD TY I A
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 1/470 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ +F + + AR + M GIE ++ T +I+ Y + + A S
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ + + G E +T+S +V GF G A + E + + +I C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ A L+ M E G Y +++ GN L +F +++E S++
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y +I+ K G AL + M+ GIK ++ TYS LI G W + + +++
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+ PDVV ++ +I F G + A + EM P + T+ +I GF + +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A ++FD+M GC P + T++ LI + ++++ + + E++ G+ PN TY T++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
G+ G A E F ++ + G+ V TY LL C +G + AL + ++M ++
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CK 762
+YNI+I G V +A L + +GV+PDV TY I CK
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 205/438 (46%)
Query: 292 KKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEAL 351
++P ++N +G + A + M G +P Y +++ + AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 352 SCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQ 411
RKM+E I+ S+V YSI++ K G+ + A F E + + + + Y ++I
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 412 CQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSI 471
C + ++R+M I + + ++D + G + ++ + G +P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 472 ISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFED 531
I+Y LI+ + K + +A ++ +M S G + ++ TYS+LIN + K K + +F +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 532 VMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGE 591
+ GL P+ + YN ++ FC G ++ A + +EM P+ T+ ++ G GE
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 592 MKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTT 651
+ +ALEIF+ M++S + +N +I G+ +++ A + ++ G+ P+ TY
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 652 IMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQK 711
++ G G +A F K++ +G D FTY L++A + S++ + +EM
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 712 IPRNTFVYNILIDGWARR 729
++ ++ID + R
Sbjct: 591 FSADSSTIKMVIDMLSDR 608
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 458 VFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFL 517
+FE + + P+ I + L + + + L K M+ +GI+H+M T +++IN +
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 518 KLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSR 577
+ K F+V + G +PD + ++ ++ FC G + A+ +V M + + RP
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 578 TFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM 637
T +I+G G + AL + D M G P T+ ++ L + A+++ +M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 638 TLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRM 697
I + Y+ ++ G A F ++ +G++ DV TY +L+ C G+
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 698 QSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
+ +EM + I + ++ LID + + G + EA +L +M G+ PD TY S
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 758 INA-CK 762
I+ CK
Sbjct: 357 IDGFCK 362
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 148/337 (43%), Gaps = 36/337 (10%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P F +++ + + G + A++ + M RGI P Y +LI + + EA
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
M +G E +VTYSI++ + K + F E + N I Y ++ CQ
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ + A+ L ++M G+ PS+++
Sbjct: 433 SGKLNAAKELFQEMVSRGV-----------------------------------PPSVVT 457
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
YG L++ G+++KALE+ + M+ S + + Y+++I+G + +++F +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
G+KPDVV YN +I C G++ A + ++M+++ P T+ +I +
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKA 630
++E+ + M+ G T +++ ++ R+++K+
Sbjct: 578 SSVELIEEMKVCGFSADSSTIK-MVIDMLSDRRLDKS 613
Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 279 ENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLI 338
+ W S ++ KP + +M+ ++G + A F M+ G P Y LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 339 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIV 373
A+ G + ++ + +MK G T +++
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 234/500 (46%), Gaps = 12/500 (2%)
Query: 267 RREFRKAVETQPENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARG 326
++EF KA W+ F KP + ++N A+ G + A + F+ M RG
Sbjct: 162 KKEFEKARGFLDWMWK---EGF----KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 327 IEPTLHVYTNLIHAYAVGRDMEEALSCV-RKMKEEGIEMSLVTYSIIVGGFAKMGNAEAA 385
+ P + Y LI + +D + A+ R +++ + ++ T++I++ G +K G +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 386 DHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDG 445
+E K+ + Y ++I+ C N+++AE++ +++E + Y+ M+ G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 446 YTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHN 505
+ G ++ L ++ R+ E S +I+SY LI + GK+ +A + ++M + G +
Sbjct: 335 FCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 506 MKTYSMLINGFLKLKDWAN-VFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIV 564
TY + I+G L + + N V ++V G DV Y +II C ++ A ++V
Sbjct: 394 KTTYGIFIHG-LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 565 KEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEK 624
KEM K S +I G R + A M ++GC PTV ++N LI GL +
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 625 RQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTY 684
+ +A + EM G P+ TY+ ++ G A E + + GLE DV +
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 685 EALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQ 744
L+ C G++ A+ V M + N YN L++G+ + GD A + M +
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 745 EGVQPDVHTYTSFINA-CKC 763
G+QPD+ +Y + + C C
Sbjct: 633 MGLQPDIISYNTIMKGLCMC 652
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 226/467 (48%), Gaps = 13/467 (2%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE- 360
MVN+ +R E +R++ + V ++I Y ++AL ++M+E
Sbjct: 58 MVNHVSR---------IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108
Query: 361 GIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERA 420
G E ++ +Y+ ++ F + + F + N Y +I C+ + E+A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 421 EALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
+ M +EG + Y +++ G + L +F+ + E G +P + Y LI+
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 481 YTKIGKVSKALEV-SKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKP 539
+ K A+E+ ++++ S + N+KT++++I+G K + ++E + ++ +
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 540 DVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIF 599
D+ Y+++I C GN+D+A + E+ + + T+ ++ GF R G++K +LE++
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 600 DMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASL 659
+M + V ++N LI GL+E ++++A I M G + ++ TY +HG
Sbjct: 349 RIMEHKNSVNIV-SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 660 GDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVY 719
G KA ++ + G LDV+ Y +++ CK R++ A + KEMS + N+ V
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 720 NILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI-NACKCSK 765
N LI G R + EA+ +++M + G +P V +Y I CK K
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 200/437 (45%), Gaps = 3/437 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +M++ ++ G + + +E M+ E L+ Y++LIH ++++A S
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNA-EAADHWFEEAKERHATLNAIIYGNIIYAQC 412
++ E + +VTY+ ++GGF + G E+ + W E ++N + Y +I
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW--RIMEHKNSVNIVSYNILIKGLL 370
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ ++ A + R M +G A Y + + G + G K L V + ++ G +
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y +I+ K ++ +A + K M G++ N + LI G ++ ++
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
++G +P VV YN +I C G A VKEM + +P +T+ ++ G R ++
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
ALE++ +SG V N LI GL +++ A+ ++ M + N TY T+
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
M G+ +GD+ +A + + GL+ D+ +Y ++K C + A+ + I
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 713 PRNTFVYNILIDGWARR 729
+ +NIL+ R
Sbjct: 671 FPTVYTWNILVRAVVNR 687
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 178/363 (49%), Gaps = 3/363 (0%)
Query: 400 NAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVF 459
+A++Y +I+ +TR + +V + + D+ ++ Y ++ L VF
Sbjct: 42 SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101
Query: 460 ERLKEC-GFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLK 518
+R++E G P+I SY L+N + + + K + +++G+ N++TY++LI K
Sbjct: 102 KRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161
Query: 519 LKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRT 578
K++ + + ++G KPDV Y+ +I G +D A+ + EM + P
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTC 221
Query: 579 FMPIIHGFARAGEMKRALEIFD-MMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM 637
+ +I GF + + K A+E++D ++ S P V T N +I GL + +++ ++I + M
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 638 TLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRM 697
+ +TY++++HG G+ KA F +L +DV TY +L C+ G++
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 698 QSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
+ +L + + M K N YNILI G G + EA + + M +G D TY F
Sbjct: 342 KESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 758 INA 760
I+
Sbjct: 401 IHG 403
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 526 FAVFEDVMRD-GLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIH 584
FA+F+ R G V+Y++I+R ++ IV+ ++ + + + +I
Sbjct: 27 FALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIK 86
Query: 585 GFARAGEMKRALEIFDMMRRS-GCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS 643
+ + +AL++F MR GC P + ++N L+ VE +Q K + AG++
Sbjct: 87 TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVA 146
Query: 644 PNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 703
PN TY L+K CK + A
Sbjct: 147 PNLQTYNV-----------------------------------LIKMSCKKKEFEKARGF 171
Query: 704 TKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
M + + F Y+ +I+ A+ G + +A +L +M + GV PDV Y I+
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 236/479 (49%), Gaps = 8/479 (1%)
Query: 288 FERIKK----PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTL-HVYTNLIHAYA 342
F++++K P+ F +++ ++ + G+M +A + ++ M G+ P++ HV+T +I +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHT-IIQGWL 420
Query: 343 VGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAI 402
G+ EEAL + E G+ V +I+ K G + A + + R N +
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 403 IYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERL 462
Y N++ C+ +NM+ A + ++ E+G+ Y +++DG +E+ L V +
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 463 KECGFSPSIISYGCLINLYTKIGKVSKALEV-SKVMKSSGIKHNMKTYSMLINGFLKLKD 521
+ + Y +IN K+G+ SKA E+ + +++ + + +Y+ +I+GF K +
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 522 WANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMP 581
+ A +E++ +G+ P+V+ Y +++ C MD+A+ + EM+ + + +
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 582 IIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAG 641
+I GF + M+ A +F + G P+ +N+LI G M A+++ +M G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 642 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSAL 701
+ + TYTT++ G G+ A E +T+++ GL D Y ++ K G+ +
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 702 AVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ +EM + N +YN +I G R G++ EA L +M +G+ PD T+ ++
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 35/500 (7%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS+ + ++ ++G+M A + + M + GI + T+LI + D+ AL
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAA-----------------------DHWFE 390
KM++EG + VT+S+++ F K G E A W +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 391 EAKERHA-----------TLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIY 439
K A N + I+ C+ + A L+ ME GI + Y
Sbjct: 422 GQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
Query: 440 HMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKS 499
+ +M G+ N + IVF + E G P+ +Y LI+ + ALEV M S
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 500 SGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDG-LKPDVVLYNNIIRAFCGMGNMD 558
S I+ N Y +ING K+ + + +++ + L + YN+II F G MD
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 559 RAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALI 618
A+ +EM P T+ +++G + M +ALE+ D M+ G + + ALI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 619 LGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLE 678
G ++ ME A + E+ G++P++ Y +++ G+ +LG+ A + + K+ +GL
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 679 LDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADL 738
D+ TY L+ K G + A + EM A + + +Y ++++G +++G + +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 739 MQQMKQEGVQPDVHTYTSFI 758
++MK+ V P+V Y + I
Sbjct: 782 FEEMKKNNVTPNVLIYNAVI 801
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 207/404 (51%), Gaps = 3/404 (0%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++++ ++G A + M +RGI P + Y N++ + ++M+ A + E+G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
++ + TYSI++ G + + + A + +N ++Y II C+ +A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 422 ALVRDM-EEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
L+ +M EE+ + Y+ ++DG+ G + + +E + G SP++I+Y L+N
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 481 YTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPD 540
K ++ +ALE+ MK+ G+K ++ Y LI+GF K + + A+F +++ +GL P
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 541 VVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFD 600
+YN++I F +GNM A+ + K+M K+ R T+ +I G + G + A E++
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 601 MMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLG 660
M+ G +P + ++ GL +K Q K +++ +EM ++PN Y ++ G+ G
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 661 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVT 704
+ +AF ++ ++G+ D T++ L+ + G +Q A +
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQPVRAAS 850
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 223/470 (47%), Gaps = 6/470 (1%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM-EEALSCVRKMKEEGIEMS 365
+R + A++ + M A G++ +V T L+ ++ + EAL + + E G E
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGD-NVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD 267
Query: 366 LVTYSIIVGGFAKMGNAEAADHWFEEAKERHATL-NAIIYGNIIYAQCQTRNMERAEALV 424
+ YS+ V K + A+ E KE+ + + Y ++I A + NM+ A L
Sbjct: 268 SLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLK 327
Query: 425 RDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
+M +GI + ++ G+ + L++F+++++ G SP+ +++ LI + K
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387
Query: 485 GKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
G++ KALE K M+ G+ ++ +I G+LK + +F++ GL +V +
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVC 446
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
N I+ C G D A ++ +M+ P ++ ++ G R M A +F +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
G P +T++ LI G + A+E+++ MT + I N Y TI++G +G T K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 665 AFEYFTKLRNEG-LELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILI 723
A E + E L + +Y +++ K G M SA+A +EM I N Y L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 724 DGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQRNGRS 773
+G + + +A ++ +MK +GV+ D+ Y + I+ C +SN + +
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF-CKRSNMESASA 675
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 209/433 (48%), Gaps = 1/433 (0%)
Query: 329 PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW 388
P++ ++ L+ A A + +S +M+ GI +L TYSI + F + A
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
+ + + + +++ C + A ALV M E G + ++ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKT 508
+ + + ER+ G P +++YG +IN K G+ AL + M+ I+ ++
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 509 YSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
Y+ +I+G K K + F +F + G+KPDV YN +I C G A ++ +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 569 KERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG-CIPTVHTFNALILGLVEKRQM 627
++ P F +I F + G++ A +++D M +S C P V +N LI G + +++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 628 EKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEAL 687
E+ +E+ EM+ G+ N TYTT++HG+ D A F ++ ++G+ D+ TY L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 688 LKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGV 747
L C +G +++AL V + M + + + Y +I+ + G V + DL + +GV
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 748 QPDVHTYTSFINA 760
+P+V TYT+ ++
Sbjct: 493 KPNVVTYTTMMSG 505
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 215/462 (46%), Gaps = 1/462 (0%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+ + +NY+ RR + A M G P++ +L++ + G + EA++ V +M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + VT++ +V G + A A E + + + YG +I C+ +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+ ME+ I+A + IY+ ++DG + + +F +++ G P + +Y LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDG-L 537
+ G+ S A + M I ++ ++ LI+ F+K +++++++
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 538 KPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALE 597
PDVV YN +I+ FC ++ + + +EM + + T+ +IHGF +A + A
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 598 IFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYA 657
+F M G P + T+N L+ GL +E A+ + + M + + TYTT++
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 658 SLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTF 717
G ++ F L +G++ +V TY ++ C+ G + A A+ EM N+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 718 VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
YN LI R GD +A+L+++M+ G D T+ N
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 216/468 (46%), Gaps = 1/468 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS EF +++ A+ E M+ GI L+ Y+ I+ + + AL+
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ KM + G S+VT + ++ GF A ++ E + + + +++ Q
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
A ALV M +G + Y +++G G + L + ++++ ++
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y +I+ K + A ++ M++ GIK ++ TY+ LI+ W++ + D++
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHR-PTSRTFMPIIHGFARAGEM 592
+ PD+V +N +I AF G + A + EM K +H P + +I GF + +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+ +E+F M + G + T+ LI G + R + A + +M G+ P+ TY +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G + G+ A F ++ ++LD+ TY +++A CK+G+++ + +S + +
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
N Y ++ G+ R+G EA L +MK++G P+ TY + I A
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 151/296 (51%), Gaps = 2/296 (0%)
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
PSI+ + L++ K+ K + + + M++ GI HN+ TYS+ IN F + + A+
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
+M+ G P +V N+++ FC + A+ +V +M + ++P + TF ++HG +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
+ A+ + + M GC P + T+ A+I GL ++ + + A+ +L++M I +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
Y TI+ G AF+ F K+ +G++ DVFTY L+ C GR A + +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQM-KQEGVQPDVHTYTSFINA-CK 762
+ I + +N LID + + G + EA L +M K + PDV Y + I CK
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 192/416 (46%), Gaps = 14/416 (3%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P F +V+ + A E M +G +P L Y +I+ + + AL+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ KM++ IE +V Y+ I+ G K + + A F + + + + Y +I C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERL-------KEC 465
A L+ DM E+ I+ + ++ ++D + +E L+ E+L K C
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV----KEGKLVEAEKLYDEMVKSKHC 352
Query: 466 GFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANV 525
P +++Y LI + K +V + +EV + M G+ N TY+ LI+GF + +D N
Sbjct: 353 --FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 526 FAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHG 585
VF+ ++ DG+ PD++ YN ++ C GN++ A+ + + MQK + T+ +I
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 586 FARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPN 645
+AG+++ ++F + G P V T+ ++ G K E+A + EM G PN
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Query: 646 EHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSAL 701
TY T++ GD + E ++R+ G D T+ L+ GR+ +
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 10/261 (3%)
Query: 517 LKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTS 576
LKL D +F D+++ P +V ++ ++ A M D I + ++MQ
Sbjct: 54 LKLDD---AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110
Query: 577 RTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDE 636
T+ I+ F R ++ AL I M + G P++ T N+L+ G ++ +A+ ++D+
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 637 MTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGR 696
M G P+ T+TT++HG +A ++ +G + D+ TY A++ CK G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 697 MQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTS 756
AL + +M KI + +YN +IDG + + +A DL +M+ +G++PDV TY
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 757 FINACKCSKSNQRNGRSWSEA 777
I +C C+ GR WS+A
Sbjct: 291 LI-SCLCNY-----GR-WSDA 304
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 67/140 (47%)
Query: 621 LVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELD 680
+++ +++ AI + +M + P+ ++ ++ A + +++N G+ +
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 681 VFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQ 740
++TY + C+ ++ ALA+ +M + N L++G+ + EA L+
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 741 QMKQEGVQPDVHTYTSFINA 760
QM + G QPD T+T+ ++
Sbjct: 170 QMVEMGYQPDTVTFTTLVHG 189
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 216/457 (47%), Gaps = 1/457 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
K R + +++N Y + ++ + F M G P + + N + + VG
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCF-NYLLTFVVGSSSFNQWW 149
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ + + + ++ I++ G + G E + E E + N +IY +I C
Sbjct: 150 SFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +E+A+ L +M + G+ A Y ++++G G +++ ++E+++E G P++
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y C++N K G+ A +V M+ G+ N+ TY+ LI G + V + +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
DG+ P+++ YN +I FCG+G + +A+ + ++++ P+ T+ ++ GF R G+
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A ++ M G P+ T+ LI MEKAI++ M G+ P+ HTY+ +
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+HG+ G +A F + + E + Y ++ CK G AL + KEM +++
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQP 749
N Y +I+ + EA L+++M G+ P
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 212/441 (48%), Gaps = 6/441 (1%)
Query: 331 LHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW-- 388
+Y +I++Y + + ++S +M + G ++ ++ +G++ W
Sbjct: 94 FRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV--VGSSSFNQWWSF 151
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
F E K + L+ +G +I C+ +E++ L+ ++ E G + IY ++DG
Sbjct: 152 FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKT 508
G EK +F + + G + +Y LIN K G + E+ + M+ G+ N+ T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 509 YSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
Y+ ++N K + F VF+++ G+ ++V YN +I C ++ A +V +M+
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 569 KERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQME 628
+ P T+ +I GF G++ +AL + ++ G P++ T+N L+ G K
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 629 KAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALL 688
A +++ EM GI P++ TYT ++ +A + KA + + GL DV TY L+
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 689 KACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 748
C G+M A + K M + N +YN +I G+ + G + A L+++M+++ +
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 749 PDVHTYTSFINA-CKCSKSNQ 768
P+V +Y I CK KS +
Sbjct: 511 PNVASYRYMIEVLCKERKSKE 531
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 179/359 (49%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +++ ++G++ +A+ F M G+ YT LI+ ++
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
KM+E+G+ +L TY+ ++ K G + A F+E +ER + N + Y +I C+
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ A +V M+ +GI+ + Y+ ++DG+ +G K L + LK G SPS+++
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y L++ + + G S A ++ K M+ GIK + TY++LI+ F + + + +
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
GL PDV Y+ +I FC G M+ A + K M ++ P + +I G+ + G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
RAL++ M P V ++ +I L ++R+ ++A ++++M +GI P+ + I
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 163/331 (49%), Gaps = 5/331 (1%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
+ R + +++N + G + + +E M+ G+ P L+ Y +++ ++A
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+M+E G+ ++VTY+ ++GG + A+ ++ K N I Y +I C
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ +A +L RD++ G+ + Y++++ G+ G+ + + ++E G PS ++
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y LI+ + + + KA+++ M+ G+ ++ TYS+LI+GF +F+ ++
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+P+ V+YN +I +C G+ RA+ ++KEM+++ P ++ +I + + K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEK 624
A + + M SG P+ IL L+ +
Sbjct: 531 EAERLVEKMIDSGIDPSTS-----ILSLISR 556
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
ER KPS+ + ++++ +AR +M +A Q +M G+ P +H Y+ LIH + + M
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
EA + M E+ E + V Y+ ++ G+ K G++ A +E +E+ N Y +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMM 442
C+ R + AE LV M + GID I ++
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 210/468 (44%), Gaps = 36/468 (7%)
Query: 329 PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHW 388
P V+ L +EEA+ C KMK + + + ++ FAK+G + +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 389 FEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTI 448
F++ A Y +I C+ ++E A L +M+ G+ Y+ M+DG+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 449 IGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKT 508
+G + + FE +K+ P +I+Y LIN + K GK+ LE + MK +G+K N+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 509 YSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQ 568
YS L++ F K + D+ R GL P+ Y ++I A C +GN+ A + EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 569 K--------------------ERHR---------------PTSRTFMPIIHGFARAGEMK 593
+ ER + P ++ +IHGF +A M
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
RALE+ + ++ G P + + I GL ++E A +++EM GI N YTT+M
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQ-KI 712
Y G+ + +++ +E+ V T+ L+ CK+ + A+ +S +
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
N ++ +IDG + V A L +QM Q+G+ PD YTS ++
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 222/479 (46%), Gaps = 5/479 (1%)
Query: 285 VSAFERIKK----PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHA 340
+ F ++K+ P R +++ +A+ G ++ F++M G PT+ Y +I
Sbjct: 212 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 271
Query: 341 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLN 400
D+E A +MK G+ VTY+ ++ GF K+G + +FEE K+ +
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 401 AIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFE 460
I Y +I C+ + R+M+ G+ + Y ++D + G ++ + +
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 461 RLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLK 520
++ G P+ +Y LI+ KIG +S A + M G++ N+ TY+ LI+G +
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 521 DWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFM 580
+F + G+ P++ YN +I F NMDRA+ ++ E++ +P +
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 581 PIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLA 640
I G +++ A + + M+ G + L+ + + + +LDEM
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 641 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNE-GLELDVFTYEALLKACCKSGRMQS 699
I T+ ++ G KA +YF ++ N+ GL+ + + A++ CK ++++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 700 ALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
A + ++M + + + Y L+DG ++G+V EA L +M + G++ D+ YTS +
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 218/460 (47%), Gaps = 3/460 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYA-VGRDMEEAL 351
+P+ + +M++ + GD+ AR FE M+ RG+ P Y ++I + VGR +++ +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR-LDDTV 317
Query: 352 SCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQ 411
+MK+ E ++TY+ ++ F K G ++ E K N + Y ++ A
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 412 CQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSI 471
C+ M++A DM G+ Y ++D IGN + + + G ++
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 472 ISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFED 531
++Y LI+ ++ +A E+ M ++G+ N+ +Y+ LI+GF+K K+ + +
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 532 VMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGE 591
+ G+KPD++LY I C + ++ A ++ EM++ + S + ++ + ++G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 592 MKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMT-LAGISPNEHTYT 650
L + D M+ TV TF LI GL + + + KA++ + ++ G+ N +T
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 651 TIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQ 710
++ G A F ++ +GL D Y +L+ K G + ALA+ +M+
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 711 KIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPD 750
+ + Y L+ G + + +A +++M EG+ PD
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 178/376 (47%), Gaps = 1/376 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP+ + +V+ + + G M +A + + +MR G+ P + YT+LI A ++ +A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+M + G+E ++VTY+ ++ G + A+ F + N Y +I+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +NM+RA L+ +++ GI + +Y + G + E +V +KECG + +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
Y L++ Y K G ++ L + MK I+ + T+ +LI+G K K + F +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 533 MRD-GLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGE 591
D GL+ + ++ +I C ++ A + ++M ++ P + ++ G + G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 592 MKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTT 651
+ AL + D M G + + +L+ GL Q++KA L+EM GI P+E +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
Query: 652 IMHGYASLGDTGKAFE 667
++ + LG +A E
Sbjct: 724 VLKKHYELGCIDEAVE 739
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 150/310 (48%)
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
P + L ++ +G + +A++ MK + ++ + L++ F KL +V
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
F+D++ G +P V YN +I C G+++ A + +EM+ P + T+ +I GF +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
G + + F+ M+ C P V T+NALI + ++ +E EM G+ PN +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
Y+T++ + G +A +++ +R GL + +TY +L+ A CK G + A + EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQ 768
+ N Y LIDG + EA +L +M GV P++ +Y + I+ +K+
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 769 RNGRSWSEAK 778
R +E K
Sbjct: 490 RALELLNELK 499
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 1/279 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +++ + + +M RA + ++ RGI+P L +Y I +E A
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ +MKE GI+ + + Y+ ++ + K GN H +E KE + + + +I C+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 414 TRNMERA-EALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + +A + R + G+ A I+ M+DG E +FE++ + G P
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y L++ K G V +AL + M G+K ++ Y+ L+ G + E++
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKER 571
+ +G+ PD VL ++++ +G +D A+ + + K +
Sbjct: 710 IGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQ 748
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 214/462 (46%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
+M+N R + A + G EP ++ LI+ + + EAL V +M
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G + +L+T + +V G G A + E N + YG ++ C++
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+R MEE I Y +++DG G+ + +F ++ GF II Y LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G+ ++ + M I ++ +S LI+ F+K + +++++ G+
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD V Y ++I FC +D+A H++ M + P RTF +I+G+ +A + LE+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
F M G + T+N LI G E ++E A E+ EM + P+ +Y ++ G
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 659 LGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFV 718
G+ KA E F K+ +ELD+ Y ++ C + ++ A + + + + +
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 719 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
YNI+I G ++G + EA L ++M+++G P+ TY I A
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 222/484 (45%), Gaps = 36/484 (7%)
Query: 315 ARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVG 374
A F+ M P L ++ L A + + L ++M+ +GI +L T SI++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 375 GFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDA 434
+ A + + + + + +I C + A LV M E G
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 435 PIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVS 494
+ + +++G + G +++ +R+ E GF P+ ++YG ++ + K G+ + A+E+
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 495 KVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGM 554
+ M+ IK + YS++I+G K N F +F ++ G K D+++Y +IR FC
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 555 GNMDRAIHIVKEMQK---------------------------ERHR--------PTSRTF 579
G D ++++M K E H+ P + T+
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 580 MPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTL 639
+I GF + ++ +A + D+M GC P + TFN LI G + ++ +E+ +M+L
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 640 AGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQS 699
G+ + TY T++ G+ LG A E F ++ + + D+ +Y+ LL C +G +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 700 ALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
AL + +++ K+ + +YNI+I G V +A DL + +GV+PDV TY I
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 760 A-CK 762
CK
Sbjct: 536 GLCK 539
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 220/467 (47%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P F ++N G + A + + M G +PTL L++ + + +A+
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ +M E G + + VTY ++ K G A + +ER L+A+ Y II C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ +++ A L +ME +G A I IY ++ G+ G + + + + +P ++
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ + K GK+ +A E+ K M GI + TY+ LI+GF K + + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G P++ +N +I +C +D + + ++M + T+ +I GF G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
+ A E+F M P + ++ L+ GL + + EKA+EI +++ + + + Y I
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+HG + A++ F L +G++ DV TY ++ CK G + A + ++M
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
N YNILI GD ++A L++++K+ G D T ++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 154/303 (50%), Gaps = 1/303 (0%)
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
P +I + L ++ + + L++ K M+ GI HN+ T S++IN + + + F+
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
+++ G +PD V ++ +I C G + A+ +V M + H+PT T +++G
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
G++ A+ + D M +G P T+ ++ + + Q A+E+L +M I +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
Y+ I+ G G AF F ++ +G + D+ Y L++ C +GR + ++M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSN 767
+KI + ++ LID + + G + EA +L ++M Q G+ PD TYTS I+ CK ++ +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 768 QRN 770
+ N
Sbjct: 370 KAN 372
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 169/365 (46%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
ER K ++ ++++ + G + A F M +G + + +YT LI + +
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
+ +R M + I +V +S ++ F K G A+ +E +R + + + Y ++I
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
C+ +++A ++ M +G I ++++++GY + L +F ++ G
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
++Y LI + ++GK+ A E+ + M S ++ ++ +Y +L++G + +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
FE + + ++ D+ +YN II C +D A + + + +P +T+ +I G +
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
G + A +F M G P T+N LI + + K+ ++++E+ G S + T
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 649 YTTIM 653
++
Sbjct: 600 VKMVV 604
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 152/329 (46%), Gaps = 2/329 (0%)
Query: 306 YARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMS 365
YA R D + +M R I P + ++ LI + + EA ++M + GI
Sbjct: 294 YAGRWD--DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 366 LVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVR 425
VTY+ ++ GF K + A+H + + N + +I C+ ++ L R
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 426 DMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIG 485
M G+ A Y+ ++ G+ +G E +F+ + P I+SY L++ G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 486 KVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYN 545
+ KALE+ + ++ S ++ ++ Y+++I+G + + +F + G+KPDV YN
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 546 NIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRS 605
+I C G++ A + ++M+++ H P T+ +I G+ ++ ++ + ++R
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 606 GCIPTVHTFNALILGLVEKRQMEKAIEIL 634
G T ++ L + R + +++L
Sbjct: 592 GFSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 274 VETQPENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHV 333
+E E +Q +VS R +P + ++++ G+ +A + FE + +E + +
Sbjct: 438 LEVAKELFQEMVS---RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 334 YTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAK 393
Y +IH +++A + +G++ + TY+I++GG K G+ AD F + +
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 394 ERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMD 444
E + N Y +I A + ++ L+ +++ G M++D
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 210/439 (47%), Gaps = 4/439 (0%)
Query: 315 ARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVG 374
A F+ M G+ P + + LI+ + + EA + V KM +G+ + +VTY IV
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 375 GFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDA 434
G KMG+ ++A + + +E H + +IY II C+ + A+ L +M E+GI
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 435 PIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVS 494
+ Y+ M+DG+ G + + E +P ++++ LI+ K GK+ +A ++
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 495 KVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGM 554
M I + TY+ +I GF K + + +F D+M PDVV +N II +C
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRA 445
Query: 555 GNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTF 614
+D + +++E+ + + T+ +IHGF + A ++F M G P T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 615 NALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRN 674
N L+ G E ++E+A+E+ + + ++ I + Y I+HG +A++ F L
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 675 EGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWE 734
G+E DV TY ++ C + A + +M + YN LI G + G++ +
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 735 AADLMQQMKQEGVQPDVHT 753
+ +L+ +M+ G D T
Sbjct: 626 SIELISEMRSNGFSGDAFT 644
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/550 (22%), Positives = 231/550 (42%), Gaps = 44/550 (8%)
Query: 252 GEEFR----STWHKEREWHRREFRKAVETQP----ENWQAVVSAFERIKKPS-------- 295
GEE + S + K + F V ++P + V+ F R+ +P
Sbjct: 72 GEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRK 131
Query: 296 ---RR------EFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRD 346
RR F +++ + + + TF + G +P + + L+H +
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 347 MEEALSCVRKMKEEG-----------IEMSL----VTYSIIVGGFAKMGNAEAADHWFEE 391
+ EAL+ M E G +E+ L +T++ ++ G G A +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 392 AKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGN 451
+ ++ + YG I+ C+ + + A L+ MEE I + IY ++D G+
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 452 EEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSM 511
+F + E G +P++ +Y C+I+ + G+ S A + + M I ++ T++
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 512 LINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKER 571
LI+ +K + ++++ + PD V YN++I FC D A H+ M
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 572 HRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAI 631
P TF II + RA + +++ + R G + T+N LI G E + A
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 632 EILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKAC 691
++ EM G+ P+ T +++G+ +A E F ++ ++LD Y ++
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 692 CKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDV 751
CK ++ A + + + + YN++I G+ + + +A L +MK G +PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 752 HTYTSFINAC 761
TY + I C
Sbjct: 608 STYNTLIRGC 617
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 178/410 (43%), Gaps = 40/410 (9%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + +++ + G A+ F M +GI P + Y +I + +A
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+R M E I ++T++ ++ K G A+ +E R + + Y ++IY C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + A+ HM F+ + SP ++
Sbjct: 413 KHNRFDDAK------------------HM-----------------FDLMA----SPDVV 433
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ +I++Y + +V + +++ + + G+ N TY+ LI+GF ++ + +F+++
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G+ PD + N ++ FC ++ A+ + + +Q + + + IIHG + ++
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
A ++F + G P V T+N +I G K + A + +M G P+ TY T+
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALA 702
+ G G+ K+ E +++R+ G D FT + ++ GR+ + +
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFS 662
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%)
Query: 288 FERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDM 347
F+ + P F +++ Y R + Q + RG+ Y LIH + ++
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 348 EEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNI 407
A ++M G+ +T +I++ GF + E A FE + L+ + Y I
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 408 IYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGF 467
I+ C+ ++ A L + G++ + Y++M+ G+ ++F ++K+ G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 468 SPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSML 512
P +Y LI K G++ K++E+ M+S+G + T M+
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 556 NMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMM--RRSGCIP-TVH 612
++D AI M + R T+ +I F R A+ ++ M RR IP ++
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR---IPLNIY 142
Query: 613 TFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHG-------------YASL 659
+FN LI + ++ ++ ++T G P+ T+ T++HG + +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 660 GDTG--KAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTF 717
+TG +A F ++ GL V T+ L+ C GR+ A A+ +M + + +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 718 VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN-ACK 762
Y +++G + GD A +L+ +M++ ++PDV Y++ I+ CK
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 205/405 (50%), Gaps = 1/405 (0%)
Query: 365 SLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALV 424
S+V ++ ++ AKM + + + + + + + + +I+ C+ + A AL+
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 425 RDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKI 484
M + G I +++G+ ++ + + + + GF P+++ Y +IN K
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 485 GKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
++ ALEV M+ GI+ + TY+ LI+G W + + D+++ + P+V+ +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
+I F GN+ A ++ KEM + P T+ +I+GF G + A +FD+M
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
GC P V T+N LI G + +++E +++ EMT G+ + TY T++HGY G
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
A + F ++ + G+ D+ TY LL C +G+++ AL + +++ ++ + YNI+I
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQR 769
G R + EA L + + ++GV+PD Y + I+ C K QR
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG-LCRKGLQR 481
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 191/414 (46%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS +F ++ A+ + M GI L+ +T LIH + + AL+
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ KM + G S+VT ++ GF + + A + N +IY +I C+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
R++ A + ME++GI A Y+ ++ G + G + + + P++I
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ LI+ + K G + +A + K M + N+ TY+ LINGF + +F+ ++
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
G PDVV YN +I FC ++ + + EM + + T+ +IHG+ +AG++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
A ++F+ M G P + T+N L+ L ++EKA+ +++++ + + + TY I+
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEM 707
G +A+ F L +G++ D Y ++ C+ G + A + + M
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 206/435 (47%), Gaps = 1/435 (0%)
Query: 320 ENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKM 379
E +++R I P++ +T ++ A + + KM+ GI L +++I++ F +
Sbjct: 69 EMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 127
Query: 380 GNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIY 439
A + + + + G+++ CQ + A +LV M+ G + IY
Sbjct: 128 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 440 HMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKS 499
+ +++G + L VF +++ G ++Y LI+ + G+ + A + + M
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 500 SGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDR 559
I N+ ++ LI+ F+K + ++++++R + P+V YN++I FC G +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 560 AIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALIL 619
A ++ M + P T+ +I GF ++ ++ +++F M G + T+N LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 620 GLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLEL 679
G + ++ A ++ + M G+SP+ TY ++ + G KA L+ +++
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 680 DVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLM 739
D+ TY +++ C++ +++ A + + ++ + + + Y +I G R+G EA L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 740 QQMKQEGVQPDVHTY 754
++MK++G P Y
Sbjct: 488 RRMKEDGFMPSERIY 502
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 1/368 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+PS G ++N + + A ++M G P + +Y +I+ RD+ AL
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
M+++GI VTY+ ++ G + G A + +R N I + +I
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ N+ A L ++M + + Y+ +++G+ I G +F+ + G P ++
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LI + K +V +++ M G+ + TY+ LI+G+ + VF +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G+ PD+V YN ++ C G +++A+ +V+++QK T+ II G R ++
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYT-T 651
K A +F + R G P + +I GL K +A ++ M G P+E Y T
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDET 505
Query: 652 IMHGYASL 659
+ Y SL
Sbjct: 506 LRDHYTSL 513
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 172/379 (45%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
F ++++ + R + A M G P++ +L++ + G +EA+S V M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
G ++V Y+ ++ G K + A F +++ +A+ Y +I +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A L+RDM + ID + + ++D + GN + +++ + P++ +Y LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
N + G + A + +M S G ++ TY+ LI GF K K + +F ++ GL
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
D YN +I +C G ++ A + M P T+ ++ G++++AL +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
+ +++S + T+N +I GL ++++A + +T G+ P+ Y T++ G
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 659 LGDTGKAFEYFTKLRNEGL 677
G +A + +++ +G
Sbjct: 477 KGLQREADKLCRRMKEDGF 495
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 222/477 (46%), Gaps = 2/477 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + M+ + + A + FE++ P + Y +I Y +EA S
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ + + +G S++ Y+ I+ KMG + A FEE K + A N Y +I C
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLC 388
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ ++ A L M++ G+ + ++M+D ++ +FE + +P I
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ K+G+V A +V + M S + N Y+ LI F + +++D+
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ PD+ L N + G ++ + +E++ R P +R++ +IHG +AG
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
E+F M+ GC+ +N +I G + ++ KA ++L+EM G P TY ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G A + +A+ F + +++ +EL+V Y +L+ K GR+ A + +E+ + +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 713 PRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQ 768
N + +N L+D + ++ EA Q MK+ P+ TY IN CK K N+
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/548 (20%), Positives = 241/548 (43%), Gaps = 72/548 (13%)
Query: 284 VVSAFERIK-KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYA 342
VV + K +P+ + ++ ++ F+ M+ G EPT+H++T LI +A
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 343 VGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAI 402
++ ALS + +MK ++ +V Y++ + F K+G + A +F E + + +
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 403 IYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGY---------------- 446
Y ++I C+ ++ A + +E+ Y+ M+ GY
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 447 -------TII------------GNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKV 487
++I G ++ L VFE +K+ +P++ +Y LI++ + GK+
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKL 393
Query: 488 SKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNI 547
A E+ M+ +G+ N++T +++++ K + A+FE++ PD + + ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 548 IRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGC 607
I +G +D A + ++M R S + +I F G + +I+ M C
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 608 IPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFE 667
P + N + + + + EK + +E+ P+ +Y+ ++HG G + +E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 668 YFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEM-------------------- 707
F ++ +G LD Y ++ CK G++ A + +EM
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 708 ---------------SAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVH 752
+++I N +Y+ LIDG+ + G + EA +++++ Q+G+ P+++
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 753 TYTSFINA 760
T+ S ++A
Sbjct: 694 TWNSLLDA 701
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 219/477 (45%), Gaps = 5/477 (1%)
Query: 285 VSAFERIKK---PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAY 341
+ FE +KK P+ + ++++ R G + A + ++M+ G+ P + ++
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 342 AVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNA 401
+ ++EA + +M + +T+ ++ G K+G + A +E+ + N+
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 402 IIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFER 461
I+Y ++I E + +DM + + + + MD G EK +FE
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 462 LKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKD 521
+K F P SY LI+ K G ++ E+ MK G + + Y+++I+GF K
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 522 WANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMP 581
+ + E++ G +P VV Y ++I + +D A + +E + +R +
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 582 IIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAG 641
+I GF + G + A I + + + G P ++T+N+L+ LV+ ++ +A+ M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 642 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSAL 701
+PN+ TY +++G + KAF ++ +++ +G++ +Y ++ K+G + A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 702 AVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
A+ A ++ YN +I+G + +A L ++ ++ G+ +H T +
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP--IHNKTCVV 837
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 183/414 (44%)
Query: 290 RIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEE 349
++ P F +++ + G + A + +E M VYT+LI + E+
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 350 ALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIY 409
+ M + L + + K G E FEE K R +A Y +I+
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 410 AQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSP 469
+ L M+E+G Y++++DG+ G K + E +K GF P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 470 SIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVF 529
++++YG +I+ KI ++ +A + + KS I+ N+ YS LI+GF K+ + +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 530 EDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
E++M+ GL P++ +N+++ A ++ A+ + M++ + P T+ +I+G +
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
+ +A + M++ G P+ ++ +I GL + + +A + D G P+ Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 650 TTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 703
++ G ++ AF F + R GL + T LL K+ ++ A V
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 163/357 (45%), Gaps = 1/357 (0%)
Query: 404 YGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLK 463
Y +++ + RN + + ++ +M G ++ M+ G + V + ++
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 464 ECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWA 523
+ F P+ +Y LI ++ + L + + M+ G + + ++ LI GF K
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 524 NVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPII 583
+ ++ +++ L D+VLYN I +F +G +D A E++ +P T+ +I
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 584 HGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS 643
+A + A+E+F+ + ++ +P + +N +I+G + ++A +L+ G
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 644 PNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 703
P+ Y I+ +G +A + F +++ + ++ TY L+ C++G++ +A +
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFEL 399
Query: 704 TKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
M + N NI++D + + EA + ++M + PD T+ S I+
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 133/285 (46%), Gaps = 1/285 (0%)
Query: 477 LINLYTKIGKVSKALEVSK-VMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRD 535
+I + ++ V++A+E + + + + H ++Y+ L+ + +++ + + ++
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 536 GLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRA 595
G P V ++ + +V+ M+K + RP + +I F+
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 596 LEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHG 655
L +F M+ G PTVH F LI G ++ +++ A+ +LDEM + + + Y +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 656 YASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRN 715
+ +G A+++F ++ GL+ D TY +++ CK+ R+ A+ + + + +
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 716 TFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
T+ YN +I G+ G EA L+++ + +G P V Y +
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 227/492 (46%), Gaps = 27/492 (5%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P F L++ + AR+ F+ M +G +P + L+ Y ++ L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ M+ G+ + V Y+ IV F + G + ++ E+ +E + + + + I A C+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 414 TRNMERAEALVRDMEEE---GIDAPIDI-YHMMMDGYTIIGNEEKCLIVFERLKECGFSP 469
+ A + DME + G+ P I Y++M+ G+ +G E +FE ++E
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 470 SIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVF 529
S+ SY + + GK +A V K M GI ++ +Y++L++G KL ++ +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 530 EDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
+ R+G+ PD V Y ++ +C +G +D A +++EM + P + T ++H +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS------ 643
G + A E+ M G T N ++ GL +++KAIEI+ M + G +
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 644 -----------------PNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEA 686
P+ TY+T+++G G +A F ++ E L+ D Y
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 687 LLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEG 746
+ CK G++ SA V K+M + ++ YN LI G + ++E LM +MK++G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 747 VQPDVHTYTSFI 758
+ P++ TY + I
Sbjct: 625 ISPNICTYNTAI 636
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 223/502 (44%), Gaps = 28/502 (5%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
E+ KP+ FG++V Y + G + + M + G+ P +Y ++ ++ +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAK-ERHATL---NAIIY 404
++ V KM+EEG+ +VT++ + K G A F + + + + L N+I Y
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 405 GNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKE 464
++ C+ +E A+ L + E A + Y++ + G G + V +++ +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 465 CGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWAN 524
G PSI SY L++ K+G +S A + +MK +G+ + TY L++G+ +
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 525 VFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIH 584
++ +++MR+ P+ N ++ + MG + A ++++M ++ + + T I+
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 585 GFARAGEMKRALEIFDMMRRSG-----------------------CIPTVHTFNALILGL 621
G +GE+ +A+EI MR G C+P + T++ L+ GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 622 VEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDV 681
+ + +A + EM + P+ Y +H + G AF + +G +
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 682 FTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQ 741
TY +L+ ++ + EM + I N YN I V +A +L+ +
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 742 MKQEGVQPDVHTYTSFINA-CK 762
M Q+ + P+V ++ I A CK
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCK 676
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/550 (22%), Positives = 230/550 (41%), Gaps = 78/550 (14%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ + LM+ + + G + A+ FE++R +L Y + EA +
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+++M ++GI S+ +Y+I++ G K+G A K +A+ YG +++ C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
++ A++L+++M ++++ +G + + ++ E G+ +
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSG-------------------IKHN----MKTY 509
+ +++ G++ KA+E+ K M+ G I++N + TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 510 SMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQK 569
S L+NG K +A +F ++M + L+PD V YN I FC G + A ++K+M+K
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 570 ERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEK 629
+ + T+ +I G ++ + D M+ G P + T+N I L E ++E
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 630 AIEILDEMTLAGISPN----------------------------------EHTYTTIMHG 655
A +LDEM I+PN E Y+ + +
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNE 707
Query: 656 YASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRN 715
+ G KA E + + G EL F Y+ L+++ CK ++ A + +M + +
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Query: 716 TFVYNILIDGWARRGDVWEA---ADLMQQMKQEG-----VQP---DVHTYTSFINACKCS 764
+IDG + G+ EA AD M +M G V P D+H
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQ----------K 817
Query: 765 KSNQRNGRSW 774
K N+ G +W
Sbjct: 818 KHNKNGGNNW 827
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 4/227 (1%)
Query: 538 KPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALE 597
KP V LYN ++ + ++ + K+M P + TF +I + + A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 598 IFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYA 657
+FD M GC P TF L+ G + +K +E+L+ M G+ PN+ Y TI+ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 658 SLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQK---IPR 714
G + + K+R EGL D+ T+ + + A CK G++ A + +M + +PR
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 715 -NTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
N+ YN+++ G+ + G + +A L + +++ + +Y ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 99/188 (52%), Gaps = 3/188 (1%)
Query: 578 TFMPIIHGFARAGEMKRALEIFDMMRRS--GCIPTVHTFNALILGLVEKRQMEKAIEILD 635
+ + ++ FA++ + +A F ++R P+V+ +N L+ +++R++E +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136
Query: 636 EMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSG 695
+M L GI+P +T+ ++ A E F ++ +G + + FT+ L++ CK+G
Sbjct: 137 DMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 696 RMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYT 755
L + M + + N +YN ++ + R G ++ ++++M++EG+ PD+ T+
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN 256
Query: 756 SFINA-CK 762
S I+A CK
Sbjct: 257 SRISALCK 264
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 241/537 (44%), Gaps = 77/537 (14%)
Query: 301 LMVNYYARRGDMHRARQTF--ENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
++VN Y R G++ +A F E + G+E + Y +LI+ YA+ D+E +R M
Sbjct: 230 IVVNAYCRSGNVDKA-MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 288
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E G+ ++VTY+ ++ G+ K G E A+H FE KE+ + +YG ++ C+T +
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 419 RAEALVRDMEEEGIDAPIDI-----------------------------------YHMMM 443
A + +M E G+ I Y+ ++
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 444 DGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIK 503
DGY G ++ L + +++ + P++++Y L+ Y++IG L + K+M G+
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 504 HNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHI 563
+ + S L+ KL D+ ++E+V+ GL D + N +I C M ++ A I
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 564 VKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVE 623
+ + R +P +T+ + HG+ + G +K A + + M R G PT+ +N LI G +
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 624 KRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDV-- 681
R + K +++ E+ G++P TY ++ G+ ++G KA+ ++ +G+ L+V
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 682 --------FTYEALLKACCKSGRM----------QSA-----LAVTKEMSAQKIPR---- 714
F + + +AC ++ QS + T + QKI
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVEN 708
Query: 715 ---------NTFVYNILIDGWARRGDVWEAADLMQQ-MKQEGVQPDVHTYTSFINAC 761
N VYN+ I G + G + +A L + + PD +TYT I+ C
Sbjct: 709 STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGC 765
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 212/455 (46%), Gaps = 1/455 (0%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE-GIEMS 365
R+G+ A ++ M + + P + + +++AY ++++A+ ++ + G+E++
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 366 LVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVR 425
+VTY+ ++ G+A +G+ E ER + N + Y ++I C+ ME AE +
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 426 DMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIG 485
++E+ + A +Y ++MDGY G + V + + E G + LIN Y K G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 486 KVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYN 545
++ +A ++ M +K + TY+ L++G+ + + + + + + P V+ YN
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 546 NIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRS 605
+++ + +G + + K M K + ++ + G+ A+++++ +
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 606 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKA 665
G + T N +I GL + ++ +A EILD + + P TY + HGY +G+ +A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 666 FEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDG 725
F + +G+ + Y L+ K + + E+ A+ + Y LI G
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 726 WARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
W G + +A +M ++G+ +V+ + N+
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLNVNICSKIANS 655
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 210/459 (45%), Gaps = 4/459 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + +V+ Y R G + A + + M + + PT+ Y L+ Y+ + LS
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+ M + G+ ++ S ++ K+G+ A +E R + I +I C
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + A+ ++ ++ + Y + GY +GN ++ V E ++ G P+I
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
Y LI+ K ++K ++ +++ G+ + TY LI G+ + +A ++
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQK-ERHRPTSRTFMPIIHGFARAG- 590
+ G+ +V + + I + + +D A +++++ + P ++ + A
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 591 -EMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL-DEMTLAGISPNEHT 648
K A + + + +P +N I GL + ++E A ++ D ++ P+E+T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
YT ++HG A GD KAF ++ +G+ ++ TY AL+K CK G + A + ++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGV 747
+ I N YN LIDG + G+V EA L ++M ++G+
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 209/472 (44%), Gaps = 22/472 (4%)
Query: 302 MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361
++N Y + G + A Q F M ++P H Y L+ Y ++EAL +M ++
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 362 IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421
+ +++TY+I++ G++++G ++ +R + I ++ A + + A
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 422 ALVRDMEEEGIDAPIDIYHMMMDGYTIIG--NEEKCLIVFERLKECGFSPSIISYGCLIN 479
L ++ G+ ++M+ G + NE K ++ + C P++ +Y L +
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC--KPAVQTYQALSH 549
Query: 480 LYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKP 539
Y K+G + +A V + M+ GI ++ Y+ LI+G K + V + ++ GL P
Sbjct: 550 GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 540 DVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI- 598
V Y +I +C +G +D+A EM ++ I + R ++ A +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 599 -----FDMMRRSGCIPTVHTFNALI----LGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
FD++ +P + + ++ +++ +++E L + PN Y
Sbjct: 670 QKIVDFDLL-----LPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKL--LVPNNIVY 722
Query: 650 TTIMHGYASLGDTGKAFEYFTKLRNEGLEL-DVFTYEALLKACCKSGRMQSALAVTKEMS 708
+ G G A + F+ L + + D +TY L+ C +G + A + EM+
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ I N YN LI G + G+V A L+ ++ Q+G+ P+ TY + I+
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 160/325 (49%), Gaps = 3/325 (0%)
Query: 438 IYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVM 497
++ M++ Y G + L VF+ + G PS++S L++ + G+ AL V M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 498 KSSGIKHNMKTYSMLINGFLKLK--DWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMG 555
S + ++ T S+++N + + D A VFA E GL+ +VV YN++I + +G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAK-ETESSLGLELNVVTYNSLINGYAMIG 275
Query: 556 NMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFN 615
+++ +++ M + T+ +I G+ + G M+ A +F++++ + H +
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 616 ALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNE 675
L+ G Q+ A+ + D M G+ N ++++GY G +A + F+++ +
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 676 GLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEA 735
L+ D TY L+ C++G + AL + +M +++ YNIL+ G++R G +
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 736 ADLMQQMKQEGVQPDVHTYTSFINA 760
L + M + GV D + ++ + A
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEA 480
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 3/298 (1%)
Query: 462 LKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKD 521
KE FSP++ + ++ +Y + G V AL V M + G ++ + + L++ ++ +
Sbjct: 148 FKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGE 205
Query: 522 WANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTS-RTFM 580
V++ ++ + PDV + ++ A+C GN+D+A+ KE + + T+
Sbjct: 206 NFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 581 PIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLA 640
+I+G+A G+++ + +M G V T+ +LI G +K ME+A + + +
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 641 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA 700
+ ++H Y +M GY G A + G+ + +L+ CKSG++ A
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 701 LAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+ M+ + + YN L+DG+ R G V EA L QM Q+ V P V TY +
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 3/199 (1%)
Query: 563 IVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLV 622
+V+ ++ PT F I+ +A G +K AL +FD M G IP++ + N+L+ LV
Sbjct: 144 LVRVFKEFSFSPT--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 623 EKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNE-GLELDV 681
K + A+ + D+M +SP+ T + +++ Y G+ KA + + + GLEL+V
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 682 FTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQ 741
TY +L+ G ++ V + MS + + RN Y LI G+ ++G + EA + +
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 742 MKQEGVQPDVHTYTSFINA 760
+K++ + D H Y ++
Sbjct: 322 LKEKKLVADQHMYGVLMDG 340
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 207/443 (46%)
Query: 312 MHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSI 371
M +A + M G+ P Y +++H Y +EA+ ++KM+ +G+E +VTYS+
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 372 IVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEG 431
++ K G A F+ +R YG ++ + L+ M G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 432 IDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKAL 491
I ++ +++ Y G ++ ++VF ++++ G +P+ ++YG +I + K G+V A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 492 EVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAF 551
+ M G+ Y+ LI+G W + +++ G+ + + +N+II +
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 552 CGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTV 611
C G + + + + M + +P T+ +I+G+ AG+M A+++ M G P
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Query: 612 HTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTK 671
T++ LI G + +ME A+ + EM +G+SP+ TY I+ G T A E + +
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 672 LRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGD 731
+ G ++++ TY +L CK+ AL + + + + +NI+ID + G
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 732 VWEAADLMQQMKQEGVQPDVHTY 754
EA DL G+ P+ TY
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTY 689
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 219/436 (50%), Gaps = 3/436 (0%)
Query: 322 MRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE---GIEMSLVTYSIIVGGFAK 378
M G P + Y L+ +EAL + M ++ G +V+Y+ ++ GF K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 379 MGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDI 438
G+++ A + E +R + + Y +II A C+ + M++A ++ M + G+
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 439 YHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMK 498
Y+ ++ GY G ++ + ++++ G P +++Y L++ K G+ +A ++ M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 499 SSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMD 558
G+K + TY L+ G+ + + + ++R+G+ PD +++ +I A+ G +D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 559 RAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALI 618
+A+ + +M+++ P + T+ +I ++G ++ A+ F+ M G P +N+LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 619 LGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLE 678
GL + E+A E++ EM GI N + +I+ + G ++ + F + G++
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 679 LDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADL 738
+V TY L+ C +G+M A+ + M + + NT Y+ LI+G+ + + +A L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 739 MQQMKQEGVQPDVHTY 754
++M+ GV PD+ TY
Sbjct: 569 FKEMESSGVSPDIITY 584
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 216/469 (46%), Gaps = 4/469 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P + ++N + + GD +A T+ M RGI P + Y ++I A + M++A+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ M + G+ +TY+ I+ G+ G + A + ++ + + + Y ++ C+
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
A + M + G+ I Y ++ GY G + + + + G P
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
+ LI Y K GKV +A+ V M+ G+ N TY +I K + FE ++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
+GL P ++YN++I C +RA ++ EM + F II + G +
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
+ ++F++M R G P V T+N LI G +M++A+++L M G+ PN TY+T++
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA--LAVTKEMSAQK 711
+GY + A F ++ + G+ D+ TY +L+ ++ R +A L V S +
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 712 IPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
I +T YNI++ G + +A + Q + ++ + T+ I+A
Sbjct: 614 IELST--YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 212/474 (44%), Gaps = 35/474 (7%)
Query: 286 SAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGR 345
S +R KP +G ++ YA +G + + M GI P +V++ LI AYA
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385
Query: 346 DMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYG 405
+++A+ KM+++G+ + VTY ++G K G E A +FE+ + + I+Y
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445
Query: 406 NIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKEC 465
++I+ C ERAE L+ +M + GI ++ ++D + G + +FE +
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 466 GFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANV 525
G P++I+Y LIN Y GK+ +A+++ M S G+K N TYS LING+ K+ +
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 526 FAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHG 585
+F+++ G+ PD++ YN I+ G
Sbjct: 566 LVLFKEMESSGVSPDIITYN-----------------------------------IILQG 590
Query: 586 FARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPN 645
+ A E++ + SG + T+N ++ GL + + + A+++ + L +
Sbjct: 591 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLE 650
Query: 646 EHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTK 705
T+ ++ +G +A + F + GL + +TY + + G ++ +
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 710
Query: 706 EMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
M ++ + N ++ +RG++ A + + ++ + T + FI+
Sbjct: 711 SMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 202/460 (43%), Gaps = 46/460 (10%)
Query: 315 ARQTFENMRARGIEPTLHVYTNLIHAYA-VGRDM-EEALSCVRKMKEEG---IEMSLVTY 369
AR F+ + RG +++ L A A V RD A+S +M G + L TY
Sbjct: 34 ARHVFDELLRRGRGASIY---GLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 370 SIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEE 429
I++G + G + ++ ++AI + ++ C + A
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA--------- 141
Query: 430 EGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSK 489
MD IV R+ E G P++ SY L+ + +
Sbjct: 142 -------------MD------------IVLRRMTELGCIPNVFSYNILLKGLCDENRSQE 176
Query: 490 ALEVSKVM---KSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
ALE+ +M + G ++ +Y+ +INGF K D ++ + +++ G+ PDVV YN+
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
II A C MD+A+ ++ M K P T+ I+HG+ +G+ K A+ MR G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
P V T++ L+ L + + +A +I D MT G+ P TY T++ GYA+ G +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGW 726
+ G+ D + + L+ A K G++ A+ V +M Q + N Y +I
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 727 ARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
+ G V +A +QM EG+ P Y S I+ C C+K
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 215/463 (46%), Gaps = 45/463 (9%)
Query: 308 RRGDMHRARQTFENMRARGIE-------PTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE 360
R G +H R FE+ A E P++ +T L+ A A R E + +KM+
Sbjct: 43 RTGFLHSIR--FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100
Query: 361 GIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERA 420
GI L +++I++ H F C+ + A
Sbjct: 101 GISHDLYSFTILI-------------HCF----------------------CRCSRLSFA 125
Query: 421 EALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
+++ M + G + I + ++ G+ ++ + + + G+ P+++ Y LI+
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 481 YTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPD 540
K G+++ ALE+ M+ G+ ++ TY+ L+ G W++ + D+M+ + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 541 VVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFD 600
VV + +I F GN+D A + KEM + P + T+ II+G G + A + FD
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 601 MMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLG 660
+M GC P V T+N LI G + R +++ +++ M+ G + + TY T++HGY +G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 661 DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYN 720
A + F + + + D+ T+ LL C +G ++SAL +M + YN
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 721 ILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI-NACK 762
I+I G + V +A +L ++ EGV+PD TYT I CK
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 182/379 (48%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
F ++++ + R + A M G EP++ + +L+H + + + +A S V M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
+ G E ++V Y+ ++ G K G A E +++ + + Y ++ C +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A ++RDM + I+ + + ++D + GN ++ +++ + + P+ ++Y +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
N G++ A + +M S G N+ TY+ LI+GF K + +F+ + +G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
D+ YN +I +C +G + A+ I M R P T ++HG GE++ AL
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
FD MR S + +N +I GL + ++EKA E+ + + G+ P+ TYT ++ G
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 659 LGDTGKAFEYFTKLRNEGL 677
G +A E +++ EG+
Sbjct: 469 NGPRREADELIRRMKEEGI 487
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 144/316 (45%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P+ + +++ + G+++ A + M +G+ + Y L+ +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+R M + I +VT++ ++ F K GN + A ++E + N + Y +II C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ A+ M +G + Y+ ++ G+ ++ + +F+R+ GF+ I
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LI+ Y ++GK+ AL++ M S + ++ T+ +L++G + + F+D+
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+V YN +I C +++A + + E +P +RT+ +I G + G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 593 KRALEIFDMMRRSGCI 608
+ A E+ M+ G I
Sbjct: 473 READELIRRMKEEGII 488
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 585 GFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISP 644
GF + + A +F M S +P++ F L+ R+ E I +M L GIS
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 645 NEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVT 704
+ +++T ++H + A K+ G E + T+ +LL C R+ A ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 705 KEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCS 764
M N VYN LIDG + G++ A +L+ +M+++G+ DV TY + + S
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 765 KSNQRNGRSWSEA 777
GR WS+A
Sbjct: 225 ------GR-WSDA 230
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 222/470 (47%), Gaps = 1/470 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ F ++N + +RG+M RA F+ M RGIEP L Y+ LI Y +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ +G+++ +V +S + + K G+ A ++ + + N + Y +I CQ
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+ A + + + G++ I Y ++DG+ GN ++E + + G+ P ++
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
YG L++ +K G + A+ S M I+ N+ ++ LI+G+ +L + VF +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
G+KPDV + ++R G ++ A+ + M K P + + +I F + +
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
L++FD+M+R+ + N +I L + ++E A + + + + P+ TY T++
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
GY SL +A F L+ + T L+ CK+ M A+ + M+ +
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CK 762
N Y L+D +++ D+ + L ++M+++G+ P + +Y+ I+ CK
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 197/444 (44%), Gaps = 35/444 (7%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
F ++ Y + GD+ A ++ M +GI P + YT LI + EA ++
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKER----------------------- 395
+ G+E S+VTYS ++ GF K GN + +E+ +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 396 HAT------------LNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMM 443
HA LN +++ ++I C+ + A + R M GI + + +M
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 444 DGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIK 503
+ G E+ L +F R+ + G P ++Y LI+ + K K + L++ +M+ + I
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 504 HNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHI 563
++ +++I+ K + F +++ ++PD+V YN +I +C + +D A I
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 564 VKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVE 623
+ ++ P + T +IH + +M A+ +F +M G P T+ L+ +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 624 KRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFT 683
+E + ++ +EM GISP+ +Y+ I+ G G +A F + + L DV
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 684 YEALLKACCKSGRMQSALAVTKEM 707
Y L++ CK GR+ A + + M
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHM 802
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 192/405 (47%), Gaps = 19/405 (4%)
Query: 380 GNAEAADHWFEE------------AKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDM 427
G + AD F+E R +L+A + ++ C+ +++A +
Sbjct: 113 GMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYS 172
Query: 428 EEEGIDAPIDIYHMMMDGYTIIGNEEKCLIV--FERLKECGFSPSIIS-YGCLINLYTKI 484
+ G+ P D + M++ ++IG++ LI F++L G PS +S +G +++
Sbjct: 173 TQLGVVIPQDSVYRMLN--SLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK 230
Query: 485 GKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLY 544
G+V+KAL+ +++ G + + + + ++ G L + + V+ G P+VV +
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 545 NNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRR 604
+I FC G MDRA + K M++ P + +I G+ +AG + ++F
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 605 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGK 664
G V F++ I V+ + A + M GISPN TYT ++ G G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 665 AFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILID 724
AF + ++ G+E + TY +L+ CK G ++S A+ ++M P + +Y +L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 725 GWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQ 768
G +++G + A +M + ++ +V + S I+ C+ ++ ++
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%), Gaps = 10/326 (3%)
Query: 464 ECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWA 523
+CG +P+++++ LIN + K G++ +A ++ KVM+ GI+ ++ YS LI+G+ K
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 524 NVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPII 583
+F + G+K DVV++++ I + G++ A + K M + P T+ +I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 584 HGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS 643
G + G + A ++ + + G P++ T+++LI G + + + ++M G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 644 PNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 703
P+ Y ++ G + G A + K+ + + L+V + +L+ C+ R AL V
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 704 TKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CK 762
+ M I + + ++ G + EA L +M + G++PD Y + I+A CK
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 763 CSKSN---------QRNGRSWSEAKC 779
K QRN S A C
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVC 604
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 77/177 (43%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P + M+ Y + A + FE ++ P T LIH DM+ A+
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
M E+G + + VTY ++ F+K + E + FEE +E+ + + + Y II C
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSP 469
+ ++ A + + + + Y +++ GY +G + +++E + G P
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 36/158 (22%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
E+ KP+ +G +++++++ D+ + + FE M+ +GI P
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP------------------- 739
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
S+V+YSII+ G K G + A + F +A + + + Y +I
Sbjct: 740 ----------------SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGY 446
C+ + A L M G+ P D+ + Y
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGV-KPDDLLQRALSEY 820
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 236/505 (46%), Gaps = 37/505 (7%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +V+ + GD+ A M + + P + Y+++I+ Y +EEA+S
Sbjct: 364 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 423
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+RKM+++ + + TY ++ G K G E A +E + N I ++ +
Sbjct: 424 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 483
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
++ + LV+DM +G+ Y ++D + G+EE L E ++E G ++S
Sbjct: 484 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 543
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y LI+ K GKV A K M+ GI+ ++ T+++++N K D + +++ +
Sbjct: 544 YNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 602
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRP---TSRTFM---------- 580
G+KP ++ N ++ C G M+ AIHI+ +M P T R F+
Sbjct: 603 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 662
Query: 581 ----------------------PIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALI 618
+I + G K+A + M G IP TFN+L+
Sbjct: 663 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 722
Query: 619 LGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLE 678
G + KA+ M AGISPN TY TI+ G + G + ++ +++++ G+
Sbjct: 723 HGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMR 782
Query: 679 LDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADL 738
D FTY AL+ K G M+ ++ + EM A + T YN+LI +A G + +A +L
Sbjct: 783 PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAREL 842
Query: 739 MQQMKQEGVQPDVHTYTSFINA-CK 762
+++M + GV P+ TY + I+ CK
Sbjct: 843 LKEMGKRGVSPNTSTYCTMISGLCK 867
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 228/465 (49%), Gaps = 15/465 (3%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLI-HAYAVGRDMEEALS 352
P+ +G +++ + G A + + MR G+E ++ L+ H +GR ++E
Sbjct: 434 PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR-IKEVKG 492
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V+ M +G+ + + Y+ ++ F K G+ EAA W EE +ER + + Y N++ +
Sbjct: 493 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSY-NVLISGM 551
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
A+ + M E+GI+ I +++MM+ G+ E L +++++K CG PS++
Sbjct: 552 LKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 611
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
S ++ + + GK+ +A+ + M I N+ TY + ++ K K +F E +
Sbjct: 612 SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETL 671
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G+K +YN +I C +G +A ++ +M+ P + TF ++HG+ +
Sbjct: 672 LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHV 731
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
++AL + +M +G P V T+N +I GL + +++ + L EM G+ P++ TY +
Sbjct: 732 RKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 791
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKI 712
+ G A +G+ + + ++ +GL TY L+ G+M A + KEM + +
Sbjct: 792 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 851
Query: 713 PRNTFVYNILIDG-----------WARRG-DVWEAADLMQQMKQE 745
NT Y +I G W ++ + EA L+++M +E
Sbjct: 852 SPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEE 896
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 224/471 (47%), Gaps = 17/471 (3%)
Query: 294 PSRREFGLMVNYYARRGDMH-RARQTFENMRARGIEPTLHVYTNLIHAYA-VGRDMEEAL 351
P R + +++ + G +H + + M A G+ P + LIH++ VGR + A+
Sbjct: 93 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGR-LSFAI 151
Query: 352 SCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQ 411
S +R I + VTY+ ++ G + G A+ A + E + + + Y +I
Sbjct: 152 SLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 208
Query: 412 CQTRNMERAEALVRDMEEEGIDAPIDIYHMMM--DGYTIIGNEEKCLIVFERLKECGFSP 469
C+ N RA+ALV ++ E + I H ++ Y + EE + + GF P
Sbjct: 209 CKVGNFVRAKALVDEISELNL-----ITHTILLSSYYNLHAIEE----AYRDMVMSGFDP 259
Query: 470 SIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVF 529
++++ +IN K GKV + + + M+ + N TY+ L++ K + + A++
Sbjct: 260 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 319
Query: 530 EDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
++ G+ D+V+Y ++ G++ A K + ++ P T+ ++ G +A
Sbjct: 320 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 379
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTY 649
G++ A I M IP V T++++I G V+K +E+A+ +L +M + PN TY
Sbjct: 380 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 439
Query: 650 TTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSA 709
T++ G G A E ++R G+E + + +AL+ + GR++ + K+M +
Sbjct: 440 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 499
Query: 710 QKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
+ + + Y LID + + GD A ++M++ G+ DV +Y I+
Sbjct: 500 KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG 550
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 213/465 (45%), Gaps = 1/465 (0%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
P+ + +V+ + A + M RGI L VYT L+ D+ EA
Sbjct: 294 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 353
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ + E+ ++VTY+ +V G K G+ +A+ + E+ N + Y ++I +
Sbjct: 354 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 413
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
+E A +L+R ME++ + Y ++DG G EE + + + ++ G +
Sbjct: 414 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 473
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
L+N +IG++ + + K M S G+ + Y+ LI+ F K D A E++
Sbjct: 474 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 533
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMK 593
G+ DVV YN +I G + A K M+++ P TF +++ + G+ +
Sbjct: 534 ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 592
Query: 594 RALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIM 653
L+++D M+ G P++ + N ++ L E +ME+AI IL++M L I PN TY +
Sbjct: 593 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 652
Query: 654 HGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIP 713
+ F+ L + G++L Y L+ CK G + A V +M A+
Sbjct: 653 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712
Query: 714 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+T +N L+ G+ V +A M + G+ P+V TY + I
Sbjct: 713 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 757
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%)
Query: 289 ERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDME 348
E+ +P F +M+N ++GD + ++ M++ GI+P+L ++ ME
Sbjct: 568 EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME 627
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
EA+ + +M I +L TY I + +K A+A E L+ +Y +I
Sbjct: 628 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 687
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
C+ ++A ++ DME G ++ +M GY + + K L + + E G S
Sbjct: 688 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 747
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
P++ +Y +I + G + + + MKS G++ + TY+ LI+G K+ + +
Sbjct: 748 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 807
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
+ +++ DGL P YN +I F +G M +A ++KEM K P + T+ +I G +
Sbjct: 808 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
K SR+ + ++ + G +A +M ARG P + +L+H Y VG + +ALS
Sbjct: 677 KLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS 736
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
M E GI ++ TY+ I+ G + G + D W E K R + Y +I Q
Sbjct: 737 TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQA 796
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ NM+ + + +M +G+ P
Sbjct: 797 KIGNMKGSMTIYCEMIADGL-----------------------------------VPKTS 821
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKL 519
+Y LI+ + +GK+ +A E+ K M G+ N TY +I+G KL
Sbjct: 822 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 868
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 223/486 (45%), Gaps = 5/486 (1%)
Query: 282 QAVVSAFERIK----KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNL 337
Q V+ FER+ +P+ + +++ G +A + + MR RGI P ++ +T
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 338 IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHA 397
+ ++ AL + M +G EM++V Y +VGGF + F +
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 398 TLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLI 457
+L + ++ C+ +++ E L+ + + G+ + Y++ + G G + +
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 458 VFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFL 517
+ L E G P +I+Y LI K K +A M + G++ + TY+ LI G+
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 518 KLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSR 577
K + D + +G PD Y ++I C G +RA+ + E + +P
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 578 TFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEM 637
+ +I G + G + A ++ + M G IP V TFN L+ GL + + A ++ M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 638 TLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRM 697
G P+ T+ ++HGY++ A E + + G++ DV+TY +LL CK+ +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 698 QSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSF 757
+ + K M + N F +NIL++ R + EA L+++MK + V PD T+ +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 758 INA-CK 762
I+ CK
Sbjct: 573 IDGFCK 578
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 211/463 (45%), Gaps = 22/463 (4%)
Query: 317 QTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGF 376
+ F M A G+ L + L+ D++E + K+ + G+ +L TY++ + G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 377 AKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPI 436
+ G + A E+ + I Y N+IY C+ + AE + M EG++
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 437 DIYHMMMDGYT----------IIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
Y+ ++ GY I+G+ VF GF P +Y LI+ G+
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDA-----VFN-----GFVPDQFTYRSLIDGLCHEGE 371
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
++AL + GIK N+ Y+ LI G + ++ GL P+V +N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
++ C MG + A +VK M + + P TF +IHG++ +M+ ALEI D+M +G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
P V+T+N+L+ GL + + E +E M G +PN T+ ++ +A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS-AQKIPRNTFVYNILIDG 725
+++N+ + D T+ L+ CK+G + A + ++M A K+ +T YNI+I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 726 WARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSN 767
+ + +V A L Q+M + PD +TY ++ CK N
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVN 654
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 215/466 (46%), Gaps = 2/466 (0%)
Query: 299 FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMK 358
F ++ ++GD+ + + + RG+ P L Y I +++ A+ V +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 359 EEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
E+G + ++TY+ ++ G K + A+ + + ++ Y +I C+ ++
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
AE +V D G Y ++DG G + L +F G P++I Y LI
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ G + +A +++ M G+ ++T+++L+NG K+ ++ + + ++ G
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 539 PDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEI 598
PD+ +N +I + M+ A+ I+ M P T+ +++G + + + +E
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 599 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYAS 658
+ M GC P + TFN L+ L R++++A+ +L+EM ++P+ T+ T++ G+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 659 LGDTGKAFEYFTKLRNE-GLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTF 717
GD A+ F K+ + TY ++ A + + A + +EM + + + +
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 718 VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKC 763
Y +++DG+ + G+V + +M + G P + T IN C C
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN-CLC 683
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 206/467 (44%), Gaps = 37/467 (7%)
Query: 300 GLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKE 359
G M NY R+G + A FE M EPT+ Y ++ ++A +M++
Sbjct: 81 GAMKNY-GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 360 EGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMER 419
GI + +++I + F C+T
Sbjct: 140 RGITPDVYSFTIRMKSF-----------------------------------CKTSRPHA 164
Query: 420 AEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLIN 479
A L+ +M +G + + Y ++ G+ + + +F ++ G S + ++ L+
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLR 224
Query: 480 LYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKP 539
+ K G V + ++ + G+ N+ TY++ I G + + + ++ G KP
Sbjct: 225 VLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKP 284
Query: 540 DVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIF 599
DV+ YNN+I C A + +M E P S T+ +I G+ + G ++ A I
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 600 DMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASL 659
+G +P T+ +LI GL + + +A+ + +E GI PN Y T++ G ++
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404
Query: 660 GDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVY 719
G +A + ++ +GL +V T+ L+ CK G + A + K M ++ + F +
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 720 NILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSK 765
NILI G++ + + A +++ M GV PDV+TY S +N CK SK
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 182/416 (43%), Gaps = 1/416 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + ++ + A M G+EP + Y LI Y G ++ A
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V G TY ++ G G A F EA + N I+Y +I
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ A L +M E+G+ + ++++++G +G + + + G+ P I
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
++ LI+ Y+ K+ ALE+ VM +G+ ++ TY+ L+NG K + +V ++ +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ G P++ +N ++ + C +D A+ +++EM+ + P + TF +I GF + G++
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 593 KRALEIFDMMRRSGCIPTVH-TFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTT 651
A +F M + + + T+N +I EK + A ++ EM + P+ +TY
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 652 IMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEM 707
++ G+ G+ +++ ++ G + T ++ C R+ A + M
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 168/391 (42%), Gaps = 37/391 (9%)
Query: 418 ERAEALVRDMEEEGIDAPID-IYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGC 476
E E ++ DM E + ++ +Y M Y G ++ + VFER+ P++ SY
Sbjct: 57 EAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNA 116
Query: 477 LINL-----------------------------------YTKIGKVSKALEVSKVMKSSG 501
++++ + K + AL + M S G
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 502 IKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAI 561
+ N+ Y ++ GF + A + +F ++ G+ + +N ++R C G++
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 562 HIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGL 621
++ ++ K P T+ I G + GE+ A+ + + G P V T+N LI GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 622 VEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDV 681
+ + ++A L +M G+ P+ +TY T++ GY G A G D
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 682 FTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQ 741
FTY +L+ C G ALA+ E + I N +YN LI G + +G + EAA L +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 742 MKQEGVQPDVHTYTSFINA-CKCSKSNQRNG 771
M ++G+ P+V T+ +N CK + +G
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 13/285 (4%)
Query: 489 KALEVSKVM-KSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVV----- 542
KALE+ M K G KH + TY +I KL + F E+V+ D ++ +V
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIE---KLGYYGK-FEAMEEVLVD-MRENVGNHMLE 76
Query: 543 -LYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDM 601
+Y ++ + G + A+++ + M PT ++ I+ +G +A +++
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 602 MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661
MR G P V++F + + + A+ +L+ M+ G N Y T++ G+
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 662 TGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNI 721
+ +E F K+ G+ L + T+ LL+ CK G ++ + ++ + + N F YN+
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 722 LIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI-NACKCSK 765
I G +RG++ A ++ + ++G +PDV TY + I CK SK
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 220/452 (48%), Gaps = 1/452 (0%)
Query: 307 ARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 366
R G+ + E M +G P + + T LI + R++ +A+ + +++ G + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
Y+ ++ GF KM + A + + + + + + Y +I + C ++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 427 MEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
+ + + Y ++++ + G ++ L + + + G P + +Y +I K G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
V +A E+ + ++ G + ++ +Y++L+ L W + + + P+VV Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
+I C G ++ A++++K M+++ P + ++ P+I F R G + A+E + M G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
C+P + +N ++ L + + ++A+EI ++ G SPN +Y T+ S GD +A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGW 726
++ + G++ D TY +++ C+ G + A + +M + + + YNI++ G+
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 727 ARRGDVWEAADLMQQMKQEGVQPDVHTYTSFI 758
+ + +A ++++ M G +P+ TYT I
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 2/387 (0%)
Query: 377 AKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPI 436
+ GN + H E + + I+ +I RN+ +A ++ +E+ G +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 437 DIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKV 496
Y+ +++G+ + + V +R++ FSP ++Y +I GK+ AL+V
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 497 MKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGN 556
+ S + + TY++LI + + ++++ GLKPD+ YN IIR C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 557 MDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNA 616
+DRA +V+ ++ + P ++ ++ G+ + ++ M C P V T++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 617 LILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEG 676
LI L ++E+A+ +L M G++P+ ++Y ++ + G A E+ + ++G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 677 LELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAA 736
D+ Y +L CK+G+ AL + ++ N+ YN + GD A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 737 DLMQQMKQEGVQPDVHTYTSFINACKC 763
++ +M G+ PD TY S I +C C
Sbjct: 459 HMILEMMSNGIDPDEITYNSMI-SCLC 484
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 187/435 (42%), Gaps = 39/435 (8%)
Query: 284 VVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAV 343
V+ E+ +P + ++N + + + A + + MR++ P Y +I +
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 344 GRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAII 403
++ AL + ++ + + +++TY+I++ G + A +E R +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 404 YGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLK 463
Y II C+ ++RA +VR++E +G + + Y++++ G E+ + ++
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 464 ECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWA 523
P++++Y LI + GK+ +A+ + K+MK G+ + +Y LI F +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 524 NVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMD------------------------- 558
E ++ DG PD+V YN ++ C G D
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 559 ----------RAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCI 608
RA+H++ EM P T+ +I R G + A E+ MR
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 609 PTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEY 668
P+V T+N ++LG + ++E AI +L+ M G PNE TYT ++ G G +A E
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME- 564
Query: 669 FTKLRNEGLELDVFT 683
L N+ + +D +
Sbjct: 565 ---LANDLVRIDAIS 576
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 2/184 (1%)
Query: 580 MPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTL 639
+ I H R+G +L + + M R G P V LI G R + KA+ +++ +
Sbjct: 93 LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 640 AGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQS 699
G P+ Y +++G+ + A ++R++ D TY ++ + C G++
Sbjct: 153 FG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 700 ALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFIN 759
AL V ++ + Y ILI+ G V EA LM +M G++PD+ TY + I
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 760 A-CK 762
CK
Sbjct: 272 GMCK 275
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%)
Query: 279 ENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLI 338
E + + F P+ + +++ R G + A + M+ +G+ P + Y LI
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 339 HAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHAT 398
A+ ++ A+ + M +G +V Y+ ++ K G A+ A F + E +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 399 LNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIV 458
N+ Y + A + + RA ++ +M GID Y+ M+ G ++ +
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 459 FERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGF 516
++ C F PS+++Y ++ + K ++ A+ V + M +G + N TY++LI G
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/530 (22%), Positives = 242/530 (45%), Gaps = 44/530 (8%)
Query: 281 WQAVVSAFERIKK----PSRREFGLMVNYYARRGDMHR-ARQTFENMRARGIEPTLHVYT 335
W + S E++K P + ++ +RG +H+ A Q FE M+A G Y
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 336 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKER 395
L+ Y +EA+ + +M G S+VTY+ ++ +A+ G + A + E+
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 396 HATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKC 455
+ Y ++ + +E A ++ +M G I ++ + Y G +
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 456 LIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLING 515
+ +F+ + CG SP I+++ L+ ++ + G S+ V K MK +G +T++ LI+
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 516 FLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPT 575
+ + + V+ ++ G+ PD+ YN ++ A G +++ ++ EM+ R +P
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 576 SRTFMPIIHGFARAGEMK----------------RALEI-------------------FD 600
T+ ++H +A E+ RA+ + F
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS 618
Query: 601 MMRRSGCIPTVHTFNALILGLVEKRQM-EKAIEILDEMTLAGISPNEHTYTTIMHGYASL 659
++ G P + T N+++ + +RQM KA +LD M G +P+ TY ++M+ ++
Sbjct: 619 ELKERGFSPDITTLNSMV-SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 660 GDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVY 719
D GK+ E ++ +G++ D+ +Y ++ A C++ RM+ A + EM I + Y
Sbjct: 678 ADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 720 NILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSNQ 768
N I +A EA +++ M + G +P+ +TY S ++ CK ++ ++
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 223/495 (45%), Gaps = 36/495 (7%)
Query: 300 GLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKE 359
++++ + G + A F ++ G ++ YT+LI A+A EA++ +KM+E
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 360 EGIEMSLVTYSIIVGGFAKMGNA-EAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNME 418
+G + +L+TY++I+ F KMG E+ K +A Y +I + +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 419 RAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLI 478
A + +M+ G Y+ ++D Y ++ + V + GFSPSI++Y LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 479 NLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLK 538
+ Y + G + +A+E+ M G K ++ TY+ L++GF + + ++FE++ G K
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 539 PDVVLYNNIIRAF------------------CGMG----------------NMDRAIH-I 563
P++ +N I+ + CG+ MD + +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 564 VKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVE 623
KEM++ P TF +I ++R G ++A+ ++ M +G P + T+N ++ L
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 624 KRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFT 683
E++ ++L EM PNE TY +++H YA+ + G ++ + +E
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 684 YEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMK 743
+ L+ C K + A E+ + + N ++ + RR V +A ++ MK
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 744 QEGVQPDVHTYTSFI 758
+ G P + TY S +
Sbjct: 657 ERGFTPSMATYNSLM 671
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 200/393 (50%), Gaps = 3/393 (0%)
Query: 370 SIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEE 429
+II+ K G +A + F +E +L+ Y ++I A + A + + MEE
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 430 EGIDAPIDIYHMMMDGYTIIGNE-EKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVS 488
+G + Y+++++ + +G K + E++K G +P +Y LI +
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 489 KALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNII 548
+A +V + MK++G ++ TY+ L++ + K V +++ +G P +V YN++I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 549 RAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCI 608
A+ G +D A+ + +M ++ +P T+ ++ GF RAG+++ A+ IF+ MR +GC
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 609 PTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEY 668
P + TFNA I + + + ++I DE+ + G+SP+ T+ T++ + G +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 669 FTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWAR 728
F +++ G + T+ L+ A + G + A+ V + M + + YN ++ A
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA- 535
Query: 729 RGDVWEAAD-LMQQMKQEGVQPDVHTYTSFINA 760
RG +WE ++ ++ +M+ +P+ TY S ++A
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 209/502 (41%), Gaps = 39/502 (7%)
Query: 282 QAVVSAFERIKKP----SRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNL 337
Q FE +K + + +++ Y + A + M G P++ Y +L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 338 IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEE-----A 392
I AYA ++EA+ +M E+G + + TY+ ++ GF + G E+A FEE
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 393 KERHATLNAII--YGN----------------------------IIYAQCQTRNMERAEA 422
K T NA I YGN ++ Q
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 423 LVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYT 482
+ ++M+ G + ++ ++ Y+ G+ E+ + V+ R+ + G +P + +Y ++
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 483 KIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVV 542
+ G ++ +V M+ K N TY L++ + K+ + ++ E+V ++P V
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 543 LYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMM 602
L ++ + A E+++ P T ++ + R + +A + D M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 603 RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDT 662
+ G P++ T+N+L+ K+ EIL E+ GI P+ +Y T+++ Y
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 663 GKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNIL 722
A F+++RN G+ DV TY + + + A+ V + M N YN +
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 723 IDGWARRGDVWEAADLMQQMKQ 744
+DG+ + EA ++ ++
Sbjct: 776 VDGYCKLNRKDEAKLFVEDLRN 797
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 84/186 (45%)
Query: 278 PENWQAVVSAFERIKKPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNL 337
PE +A ER P MV+ Y RR + +A + M+ RG P++ Y +L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 338 IHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHA 397
++ ++ D ++ +R++ +GI+ +++Y+ ++ + + A F E +
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 398 TLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLI 457
+ I Y I + E A +VR M + G + Y+ ++DGY + +++ +
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 458 VFERLK 463
E L+
Sbjct: 791 FVEDLR 796
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 38/450 (8%)
Query: 301 LMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEE 360
L++N + + + A M G EP + +T+LI+ + +G MEEA+S V +M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 361 GIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERA 420
GI+ +V Y+ I+ K G+ A F++ + + ++Y +++ C + A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 421 EALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINL 480
++L+R M + I P +I++ LI+
Sbjct: 232 DSLLRGMTKRKI-----------------------------------KPDVITFNALIDA 256
Query: 481 YTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPD 540
+ K GK A E+ M I N+ TY+ LINGF +F + G PD
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 541 VVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFD 600
VV Y ++I FC +D A+ I EM ++ + T+ +I GF + G+ A E+F
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 601 MMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMT---LAGISPNEHTYTTIMHGYA 657
M G P + T+N L+ L +++KA+ I ++M + G++PN TY ++HG
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 658 SLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTF 717
G KA F +R +++ + TY +++ CK+G++++A+ + + ++ + N
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 718 VYNILIDGWARRGDVWEAADLMQQMKQEGV 747
Y +I G R G EA L ++MK++GV
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 209/450 (46%), Gaps = 38/450 (8%)
Query: 349 EALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNII 408
EAL M E S++ ++ ++ AKM + + + + + + ++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 409 YAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFS 468
CQ+ A + + M + G + I + +++G+ + E+ + + ++ E G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
P ++ Y +I+ K G V+ AL + M++ GI+ ++ Y+ L+NG W + ++
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
+ + +KPDV+ +N +I AF G A + EM + P T+ +I+GF
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
G + A ++F +M GC P V + +LI G + ++++ A++I EM+ G++ N T
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
YTT++ G+ +G A E F+ + + G+ ++ TY LL C +G+++ AL + ++M
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 709 AQK---IPRNTFVYNILI-----------------------------------DGWARRG 730
++ + N + YN+L+ G + G
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 731 DVWEAADLMQQMKQEGVQPDVHTYTSFINA 760
V A +L + +GV+P+V TYT+ I+
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 169/354 (47%), Gaps = 3/354 (0%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
KP + +++ + G ++ A F+ M GI P + +YT+L++ +A S
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
+R M + I+ ++T++ ++ F K G A+ + E N Y ++I C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
++ A + ME +G + Y +++G+ + + +F + + G + + I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LI + ++GK + A EV M S G+ N++TY++L++ +FED+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 533 MR---DGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARA 589
+ DG+ P++ YN ++ C G +++A+ + ++M+K T+ II G +A
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473
Query: 590 GEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGIS 643
G++K A+ +F + G P V T+ +I GL + +A + +M G+S
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 36/300 (12%)
Query: 469 PSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAV 528
PSII + L+N+ K+ K + + ++ G+ H++ T ++L+N F + +
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 529 FEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFAR 588
+M+ G +PD+V TF +I+GF
Sbjct: 130 LGKMMKLGFEPDIV-----------------------------------TFTSLINGFCL 154
Query: 589 AGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHT 648
M+ A+ + + M G P V + +I L + + A+ + D+M GI P+
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 649 YTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMS 708
YT++++G + G A + ++ DV T+ AL+ A K G+ A + EM
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 709 AQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINA-CKCSKSN 767
I N F Y LI+G+ G V EA + M+ +G PDV YTS IN CKC K +
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 216/454 (47%), Gaps = 36/454 (7%)
Query: 312 MHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSI 371
++ A F +M P++ + L+ A + + +S +KM+ GI L T++I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 372 IVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEG 431
++ F A + + + + G+++ C+ + A +LV
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV------- 178
Query: 432 IDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKAL 491
+++ E G+ P I++Y +I+ K +V+ A
Sbjct: 179 ----------------------------DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 492 EVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAF 551
+ K ++ GI+ N+ TY+ L+NG W++ + D+++ + P+V+ Y+ ++ AF
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 552 CGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTV 611
G + A + +EM + P T+ +I+G + A ++FD+M GC+ V
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 612 HTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTK 671
++N LI G + +++E +++ EM+ G+ N TY T++ G+ GD KA E+F++
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 672 LRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGD 731
+ G+ D++TY LL C +G ++ AL + ++M +++ + Y +I G + G
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 732 VWEAADLMQQMKQEGVQPDVHTYTSFINACKCSK 765
V EA L + +G++PD+ TYT+ ++ C+K
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGL-CTK 483
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 203/432 (46%), Gaps = 8/432 (1%)
Query: 320 ENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKM 379
+ M GI L+ + +I+ + + ALS + KM + G E VT +V GF +
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 380 GNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIY 439
A ++ E + + Y II + C+T+ + A +++E +GI + Y
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 440 HMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGKVSKALEVSKVMKS 499
+++G + + + +P++I+Y L++ + K GKV +A E+ + M
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 500 SGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDR 559
I ++ TYS LING +F+ ++ G DVV YN +I FC ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 560 AIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALIL 619
+ + +EM + + T+ +I GF +AG++ +A E F M G P + T+N L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 620 GLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLEL 679
GL + ++EKA+ I ++M + + TYTT++ G G +A+ F L +GL+
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 680 DVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLM 739
D+ TY ++ C G + A+ +M + + +N D GD+ +A+L+
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELI 520
Query: 740 QQMKQEGVQPDV 751
++M G P +
Sbjct: 521 KKMLSCGYAPSL 532
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 208/445 (46%), Gaps = 7/445 (1%)
Query: 240 AEVRARWVAGNNGEEFRSTWHKEREW-HRREFRKAVE--TQPENWQAVVSAFERIKKPSR 296
++ R R + N+ + S K R + +F + + + + + V+S ++++
Sbjct: 57 SKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGI 116
Query: 297 RE----FGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
R F +++N + + A M G EP +L++ + + +A+S
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
V KM E G + +V Y+ I+ K A +F+E + + N + Y ++ C
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ A L+ DM ++ I + Y ++D + G + +FE + P I+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
+Y LIN ++ +A ++ +M S G ++ +Y+ LINGF K K + +F ++
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
+ GL + V YN +I+ F G++D+A +M P T+ ++ G GE+
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTI 652
++AL IF+ M++ + T+ +I G+ + ++E+A + ++L G+ P+ TYTT+
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 653 MHGYASLGDTGKAFEYFTKLRNEGL 677
M G + G + +TK++ EGL
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 163/358 (45%)
Query: 293 KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352
+P R G +VN + RR + A + M G +P + Y +I + + + +A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 353 CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412
++++ +GI ++VTY+ +V G A + ++ T N I Y ++ A
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 413 QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSII 472
+ + A+ L +M ID I Y +++G + ++ +F+ + G ++
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 473 SYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDV 532
SY LIN + K +V +++ + M G+ N TY+ LI GF + D F +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 533 MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592
G+ PD+ YN ++ C G +++A+ I ++MQK T+ +I G + G++
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 593 KRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYT 650
+ A +F + G P + T+ ++ GL K + + + +M G+ N+ T +
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)
Query: 517 LKLKDWANVFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTS 576
+KL D ++F+ D+++ P +V +N ++ A + D I + K+M+ R
Sbjct: 64 IKLNDAIDLFS---DMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 577 RTFMPIIHGFARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDE 636
TF +I+ F ++ AL I M + G P T +L+ G + ++ A+ ++D+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 637 MTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGR 696
M G P+ Y I+ AF++F ++ +G+ +V TY AL+ C S R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 697 MQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYTS 756
A + +M +KI N Y+ L+D + + G V EA +L ++M + + PD+ TY+S
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 757 FINA 760
IN
Sbjct: 301 LING 304
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 201/413 (48%), Gaps = 3/413 (0%)
Query: 367 VTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAEALVRD 426
+++++++ K+ + A F ER + Y ++ C+ ++ A L+ +
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 427 MEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIISYGCLINLYTKIGK 486
M+ EG IY++++DG G+ + + + + G P+ ++Y LI+ GK
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 487 VSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVMRDGLKPDVVLYNN 546
+ KA+ + + M SS N TY LING +K + + + + G + +Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 547 IIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFDMMRRSG 606
+I G + A+ + ++M ++ +P + ++ G R G+ A EI + M SG
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 607 CIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGDTGKAF 666
C+P +T+++L+ G + E+A+++ EM G S N+ Y+ ++ G +G +A
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 667 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTKEMSAQKIPR---NTFVYNILI 723
++K+ G++ D Y +++K C G M +AL + EM Q+ P+ + YNIL+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 724 DGWARRGDVWEAADLMQQMKQEGVQPDVHTYTSFINACKCSKSNQRNGRSWSE 776
DG + D+ A DL+ M G PDV T +F+N ++ GRS+ E
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 4/350 (1%)
Query: 294 PSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSC 353
PS + ++++ ++GD+ R + +NM +G P Y LIH + +++A+S
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 354 VRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQ 413
+ +M + VTY ++ G K A A +ER LN IY +I +
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 414 TRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFSPSIIS 473
E A +L R M E+G I +Y +++DG G + + R+ G P+ +
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 474 YGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVFAVFEDVM 533
Y L+ + K G +A++V K M +G N YS+LI+G + V+ ++
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 534 RDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEM--QKE-RHRPTSRTFMPIIHGFARAG 590
G+KPD V Y++II+ CG+G+MD A+ + EM Q+E + +P T+ ++ G
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK 554
Query: 591 EMKRALEIFDMMRRSGCIPTVHTFNALILGLVEK-RQMEKAIEILDEMTL 639
++ RA+++ + M GC P V T N + L EK +K L+E+ +
Sbjct: 555 DISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 148/327 (45%), Gaps = 35/327 (10%)
Query: 467 FSPSIISYGCLINLYTKIGKVSKALEVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANVF 526
SP+ +S+ +I K+ V +A+EV + M + TY L++G K +
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 527 AVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGF 586
+ +++ +G P V+YN +I C G++ R +V M + P T+ +IHG
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 587 ARAGEMKRALEIFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNE 646
G++ +A+ + + M S CIP T+ LI GLV++R+ A+ +L M G N+
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 647 HTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDV------------------------- 681
H Y+ ++ G G +A + K+ +G + ++
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 682 ----------FTYEALLKACCKSGRMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGD 731
+TY +L+K K+G + A+ V KEM RN F Y++LIDG G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 732 VWEAADLMQQMKQEGVQPDVHTYTSFI 758
V EA + +M G++PD Y+S I
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSII 509
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 304,809,177
Number of Sequences: 539616
Number of extensions: 13906828
Number of successful extensions: 153553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 2000
Number of HSP's that attempted gapping in prelim test: 90606
Number of HSP's gapped (non-prelim): 26146
length of query: 779
length of database: 191,569,459
effective HSP length: 125
effective length of query: 654
effective length of database: 124,117,459
effective search space: 81172818186
effective search space used: 81172818186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)