Query 004010
Match_columns 779
No_of_seqs 547 out of 3133
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:19:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-130 2E-134 1140.5 49.9 635 110-776 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 4E-117 1E-121 1035.3 51.2 613 110-775 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.1E-84 1.1E-88 786.7 43.2 541 123-776 7-606 (926)
4 3afg_A Subtilisin-like serine 100.0 1.3E-60 4.3E-65 547.4 38.4 367 34-625 34-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 3.1E-58 1.1E-62 511.2 21.3 343 35-624 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 2.3E-56 7.7E-61 508.8 25.3 357 35-625 44-466 (471)
7 1y9z_A Alkaline serine proteas 100.0 4.4E-56 1.5E-60 500.9 24.4 378 123-645 14-437 (441)
8 2p4e_P Proprotein convertase s 100.0 1.9E-58 6.6E-63 531.3 5.0 332 35-590 75-422 (692)
9 1r6v_A Subtilisin-like serine 100.0 3.8E-54 1.3E-58 499.2 23.4 375 32-635 28-450 (671)
10 1dbi_A AK.1 serine protease; h 100.0 9.1E-51 3.1E-55 430.0 24.6 266 116-623 12-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 6.1E-51 2.1E-55 428.6 21.7 262 117-623 6-269 (269)
12 1r0r_E Subtilisin carlsberg; h 100.0 5E-51 1.7E-55 430.9 19.9 263 117-623 6-274 (274)
13 4h6x_A Thiazoline oxidase/subt 100.0 1.3E-52 4.4E-57 459.6 7.1 308 123-623 21-337 (357)
14 1to2_E Subtilisin BPN'; serine 100.0 1.1E-50 3.9E-55 429.5 20.5 265 117-624 6-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 1.3E-49 4.4E-54 421.2 24.6 258 123-623 21-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 1.6E-50 5.3E-55 437.5 17.7 271 116-623 22-310 (327)
17 3zxy_A Subtilisin-like protein 100.0 1.5E-50 5.2E-55 429.6 16.3 266 129-623 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 3.5E-49 1.2E-53 425.1 25.1 287 117-618 8-309 (310)
19 2z30_A TK-subtilisin; thermoco 100.0 2.1E-49 7.1E-54 428.1 17.3 270 117-623 10-316 (320)
20 4h6w_A N-terminal cyanobactin 100.0 1E-49 3.5E-54 428.7 14.7 272 123-623 11-287 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 6.7E-49 2.3E-53 429.4 16.6 270 123-624 33-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 6.8E-48 2.3E-52 420.6 20.2 302 122-624 21-337 (340)
23 3lxu_X Tripeptidyl-peptidase 2 100.0 1.8E-47 6.2E-52 460.4 24.7 358 216-775 267-652 (1354)
24 1wmd_A Protease; alpha-beta hy 100.0 1.9E-47 6.4E-52 430.2 20.9 291 123-625 11-319 (434)
25 1sh7_A Extracellular subtilisi 100.0 4.6E-47 1.6E-51 402.0 22.7 236 123-591 19-257 (284)
26 4dzt_A Aqualysin-1, aqualysin- 100.0 1.2E-46 4.2E-51 398.2 20.5 236 123-591 21-259 (276)
27 2pwa_A Proteinase K; structure 100.0 9.7E-47 3.3E-51 398.5 18.6 240 126-619 25-272 (279)
28 2b6n_A Proteinase K; S binding 100.0 7.2E-46 2.5E-50 392.3 24.1 236 124-590 22-260 (278)
29 2oxa_A Extracellular serine pr 100.0 4.8E-46 1.7E-50 434.5 21.1 300 123-630 60-431 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.4E-45 4.7E-50 418.5 18.7 296 123-628 28-334 (471)
31 2qtw_B Proprotein convertase s 100.0 2.4E-45 8.1E-50 412.3 19.2 279 125-623 18-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 4.4E-45 1.5E-49 417.2 18.4 287 123-627 44-345 (503)
33 3f7m_A Alkaline serine proteas 100.0 8.9E-45 3E-49 384.6 18.4 229 125-591 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 1.9E-42 6.6E-47 405.6 24.6 319 123-626 60-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.9E-25 6.4E-30 255.7 7.8 96 247-350 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 6E-22 2.1E-26 216.1 10.8 103 248-351 90-207 (372)
37 2w2n_P Proprotein convertase s 99.0 8.8E-11 3E-15 105.5 4.1 76 33-108 35-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.0 2.7E-10 9.4E-15 129.4 8.9 101 248-350 262-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 99.0 8.6E-10 2.9E-14 92.7 7.8 74 32-112 5-79 (80)
40 2qtw_A Proprotein convertase s 98.8 2.7E-09 9.1E-14 97.0 5.0 76 33-108 45-123 (124)
41 3icu_A E3 ubiquitin-protein li 98.7 4.3E-08 1.5E-12 95.5 11.4 94 394-487 82-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 98.6 5.2E-08 1.8E-12 80.7 6.2 70 36-108 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.7 6.7E-05 2.3E-09 59.8 6.1 62 36-108 2-64 (65)
44 2ek8_A Aminopeptidase; metallo 97.0 0.0046 1.6E-07 68.4 13.0 70 405-474 110-182 (421)
45 3iib_A Peptidase M28; YP_92679 96.2 0.02 6.8E-07 63.6 11.5 102 379-487 105-227 (444)
46 3kas_A Transferrin receptor pr 95.8 0.013 4.6E-07 67.7 8.1 69 406-474 128-230 (640)
47 3fed_A Glutamate carboxypeptid 95.5 0.018 6E-07 67.4 7.6 71 405-475 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 95.1 0.05 1.7E-06 48.8 7.7 52 686-743 41-92 (122)
49 1y9z_A Alkaline serine proteas 87.7 1.3 4.4E-05 48.9 8.9 30 495-532 183-212 (441)
50 3lxu_X Tripeptidyl-peptidase 2 86.2 0.33 1.1E-05 59.9 3.2 24 129-152 32-55 (1354)
51 3qbt_B Inositol polyphosphate 84.1 4.6 0.00016 36.8 9.3 89 686-776 43-138 (140)
52 2e6j_A Hydin protein; PAPD, st 82.6 0.53 1.8E-05 41.0 2.1 57 686-743 26-82 (112)
53 2r39_A FIXG-related protein; s 78.8 7.8 0.00027 34.0 8.5 54 687-743 32-85 (118)
54 2qsv_A Uncharacterized protein 74.1 9.9 0.00034 37.3 8.7 63 668-743 9-71 (220)
55 3idu_A Uncharacterized protein 57.9 32 0.0011 30.5 7.8 50 686-740 33-83 (127)
56 3qis_A Inositol polyphosphate 56.3 20 0.00069 38.1 7.4 89 686-776 46-141 (366)
57 1z9l_A Vesicle-associated memb 51.3 36 0.0012 30.1 7.1 52 687-742 28-79 (128)
58 2qsv_A Uncharacterized protein 49.3 40 0.0014 32.8 7.8 54 686-743 134-187 (220)
59 1row_A SSP-19, MSP-domain prot 46.6 63 0.0022 27.7 7.6 49 690-742 19-67 (109)
60 1m1s_A WR4; structural genomic 44.3 54 0.0018 28.6 6.8 50 689-742 26-75 (116)
61 1wic_A Hypothetical protein ri 42.7 53 0.0018 30.1 6.9 51 688-742 37-87 (152)
62 1msp_A MSP, major sperm protei 42.2 53 0.0018 29.0 6.6 50 688-741 27-76 (126)
63 2cri_A Vesicle-associated memb 39.3 48 0.0016 30.1 6.1 51 688-742 33-83 (147)
64 1w8o_A Bacterial sialidase; 3D 35.6 1.5E+02 0.0052 33.2 11.0 54 686-743 373-427 (601)
65 1wgl_A TOLL-interacting protei 35.5 26 0.0009 26.6 3.0 37 554-590 3-39 (59)
66 2x41_A Beta-glucosidase; hydro 35.3 34 0.0012 39.9 5.4 73 666-742 595-677 (721)
67 3zyz_A Beta-D-glucoside glucoh 33.6 75 0.0026 36.9 7.9 54 686-742 613-674 (713)
68 3abz_A Beta-glucosidase I; gly 33.4 1E+02 0.0034 36.7 9.0 72 665-740 714-795 (845)
69 2kq1_A BH0266 protein; solutio 30.9 11 0.00038 33.1 0.2 52 689-741 56-109 (119)
70 3sd2_A Putative member of DUF3 24.5 2E+02 0.0067 24.3 6.7 65 673-759 35-99 (101)
71 3isy_A Bsupi, intracellular pr 24.2 3E+02 0.01 24.0 8.2 68 686-759 18-102 (120)
72 1ni7_A ER75, hypothetical prot 22.5 60 0.0021 29.8 3.5 26 556-581 84-109 (155)
73 2l0d_A Cell surface protein; s 20.7 3.2E+02 0.011 23.5 7.7 24 686-709 19-43 (114)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=4.4e-130 Score=1140.47 Aligned_cols=635 Identities=44% Similarity=0.739 Sum_probs=576.1
Q ss_pred ccCCCcccCCccccCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeecc
Q 004010 110 TTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFS 189 (779)
Q Consensus 110 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 189 (779)
|+++|+|+|+....++|..+.+|+||+|||||||||++||+|.+.+++++|.+|+|.|+.|.+|+...||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999998777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCC
Q 004010 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF 269 (779)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~ 269 (779)
.++.... .+ ...+..+++|.+||||||||||||+.+++.+++|++.|++.||||+|+|++||+|+.. +|.
T Consensus 81 ~~~~~~~--~~-------~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g~~ 150 (649)
T 3i6s_A 81 KGILAND--PT-------VNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTF 150 (649)
T ss_dssp HHHHHHC--TT-------CCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT-EEC
T ss_pred Ccccccc--cc-------cccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC-CCC
Confidence 8765432 11 1334567889999999999999999999999999999999999999999999999988 799
Q ss_pred HHHHHHHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCc
Q 004010 270 DSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGT 349 (779)
Q Consensus 270 ~s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst 349 (779)
.+++++||+||+++|+||||||||.. ..++..+++.+++++|.++||+||+||||+|+...++++.+||+|+|||++
T Consensus 151 ~~~i~~Ai~~A~~~gvdVIn~SlG~~---~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst 227 (649)
T 3i6s_A 151 TSDLIAAMDQAVADGVDMISISYGYR---FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGH 227 (649)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCC---SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCccC---CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeee
Confidence 99999999999999999999999987 567788999999999999999999999999999999999999999999999
Q ss_pred cCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcc--cccEEEEcCCCCchhhHHH
Q 004010 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLV--RGKIVICDRGSSPRVAKGL 427 (779)
Q Consensus 350 ~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~--~gkivl~~~g~~~~~~~~~ 427 (779)
+||.|+..+.++|++++.|.+++..... ...+|++|.. ....|.+..+++.++ +|||++|+|+.+.+.+|..
T Consensus 228 ~dr~f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~ 301 (649)
T 3i6s_A 228 TDRTFAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRI 301 (649)
T ss_dssp CSCEEEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHH
T ss_pred cccceeeEEEeCCCcEEeeeecccCccc-CcceeeEecc-----cccccccccccccccccCCcEEEEeCCCccHHHHHH
Confidence 9999999999999999999999887644 6789999966 457899988888877 9999999999999999999
Q ss_pred HHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCC
Q 004010 428 VVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPN 507 (779)
Q Consensus 428 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~ 507 (779)
+++++|+.|+|++|+. ..+..+.+.+|+++|+..+|+.|++|++++.+++++|.+..+..+..+++.++.||||||+
T Consensus 302 ~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~ 378 (649)
T 3i6s_A 302 ITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPS 378 (649)
T ss_dssp HHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSC
T ss_pred HHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCC
Confidence 9999999999999987 4566778999999999999999999999999999999999999988899999999999999
Q ss_pred CCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCC-ccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhc
Q 004010 508 GLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDL-RKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTT 586 (779)
Q Consensus 508 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~T 586 (779)
.+.+++|||||+|||++|+++|+....+.....+. +...|..+||||||||||||++|||||+||+|||++||++||+|
T Consensus 379 ~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtT 458 (649)
T 3i6s_A 379 RSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTT 458 (649)
T ss_dssp TTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred CCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 98899999999999999999999865544333332 34589999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccCCCCCCCCCccCCCcccccccCCCCceecCCchhhhhhhhcCCCCccceEEEeccccc--CCCCCC
Q 004010 587 ASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYGPKLIQVITRIPAR--CPAKRP 664 (779)
Q Consensus 587 A~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~ 664 (779)
|+++++.+.++.+...+.++++++||+|+||+.+|++||||||++++||++|||++||+.+||+.|++..+. |+.
T Consensus 459 A~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~--- 535 (649)
T 3i6s_A 459 ADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN--- 535 (649)
T ss_dssp CBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC---
T ss_pred cccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC---
Confidence 999999999998876678899999999999999999999999999999999999999999999999988777 985
Q ss_pred CCCCCCccchhhhc-ccCCCCcee--EEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEe
Q 004010 665 RPENLNYPSIAALF-STQSRGVSS--KSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTA 741 (779)
Q Consensus 665 ~~~~lN~ps~~~~~-~~~~~~~~~--~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~ 741 (779)
.+.+||||||++.+ ..... .. ++|+|||||||+..++|+++++.| +|++|+|+|++|+|++.+|+++|+|||+.
T Consensus 536 ~~~~lNyPs~~~~~~~~~~~--~~~~~~~~Rtvtnvg~~~~~y~~~v~~p-~g~~v~v~P~~l~f~~~~~~~~f~v~~~~ 612 (649)
T 3i6s_A 536 PSADLNYPSFIALYSIEGNF--TLLEQKFKRTVTNVGKGAATYKAKLKAP-KNSTISVSPQILVFKNKNEKQSYTLTIRY 612 (649)
T ss_dssp CCCCCCCSSEEEEECCSSCC--CCEEEEEEEEEEECC--CEEEEEEEECC-TTEEEEEESSEEEECC-CCEEEEEEEEEE
T ss_pred chhhcCCCcEEeecccCCCC--ccceEEEEEEEEEeCCCCcEEEEEEecC-CCCEEEEECCEEEEecCCCEEEEEEEEEe
Confidence 56799999999986 22110 12 899999999999999999999999 99999999999999989999999999998
Q ss_pred cccccccCCCcceEEEEEEEC--CceEEEeEEEEEec
Q 004010 742 DSKNLVLNDSGAAFGSISWSD--GKHEVRSPLVVTQL 776 (779)
Q Consensus 742 ~~~~~~~~~~~~~~G~~~~~~--~~~~v~~P~~v~~~ 776 (779)
.. ...+.| .||+|+|++ ++|.||+||+|++.
T Consensus 613 ~~---~~~~~~-~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 613 IG---DEGQSR-NVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CC---C---CC-CEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred cc---cCCCce-EEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 75 344566 999999999 99999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.7e-117 Score=1035.29 Aligned_cols=613 Identities=42% Similarity=0.747 Sum_probs=517.0
Q ss_pred ccCCCcccCCccccCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeecc
Q 004010 110 TTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFS 189 (779)
Q Consensus 110 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 189 (779)
||++|+|+||+. .+|.+..+|+||+|||||||||++||+|+++++++++.+|+|.|+.+.+| .||+|++|+|+|.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RCNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CCCSSEEEEEECC
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---ccCcceeeeeecc
Confidence 589999999974 68999999999999999999999999999999999999999999999887 5999999999998
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCC
Q 004010 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF 269 (779)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~ 269 (779)
.+.... ..+..+|+|++||||||||||||+.+.+.+++|++.|.++||||+|+|++||+|++. +|.
T Consensus 76 ~~~~~~-------------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-g~~ 141 (621)
T 3vta_A 76 IGRPIS-------------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCS 141 (621)
T ss_dssp CSSSCC-------------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT-EEC
T ss_pred cCCccC-------------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC-CCC
Confidence 765433 234467899999999999999999998889999999999999999999999999998 899
Q ss_pred HHHHHHHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCc
Q 004010 270 DSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGT 349 (779)
Q Consensus 270 ~s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst 349 (779)
.+++++||++|+++|+||||||||+.. ...+..+++++++++|.++||+||+||||+|+...++++.+||+++|++++
T Consensus 142 ~~di~~a~~~a~~~g~dVin~SlG~~~--~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast 219 (621)
T 3vta_A 142 DTDILAAYDDAIADGVDIISLSVGGAN--PRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAAST 219 (621)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCC--GGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCCCC--CCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEee
Confidence 999999999999999999999999874 345667899999999999999999999999999999999999999999999
Q ss_pred cCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCC-----CcccccccCCCCCCCcccccEEEEcCCCCchhh
Q 004010 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSG-----VLSASLCMENSLDPNLVRGKIVICDRGSSPRVA 424 (779)
Q Consensus 350 ~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~ 424 (779)
.+|.|...+.++++..+.+.+++... ...+++++..... ......|.+..+++.+++|||++|+++ +..
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~ 293 (621)
T 3vta_A 220 MDRKFVTQVQIGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGP 293 (621)
T ss_dssp CSEEEEEEEEETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCH
T ss_pred ccccceeeEEeccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecC---CCh
Confidence 99999999999999999988776543 4667777765542 234677999999999999999999876 345
Q ss_pred HHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCC
Q 004010 425 KGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSAR 504 (779)
Q Consensus 425 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~ 504 (779)
+..+....|+.++|++++... ..+.+.+|...++..++..++.|+.....+.+.+....+. .....+.++.||||
T Consensus 294 ~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSr 368 (621)
T 3vta_A 294 HEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSR 368 (621)
T ss_dssp HHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCC
T ss_pred hHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCC
Confidence 677788899999999987653 3456789999999999999999999999888887555443 44578899999999
Q ss_pred CCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHH
Q 004010 505 GPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMM 584 (779)
Q Consensus 505 Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~ 584 (779)
||+...++++||||+|||++|+|+|+....... +.+...|..+||||||||||||++|||||+||+|+|++||++||
T Consensus 369 GP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLm 445 (621)
T 3vta_A 369 GPNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALM 445 (621)
T ss_dssp CSCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred CCCCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHH
Confidence 999888899999999999999999987543222 22344799999999999999999999999999999999999999
Q ss_pred hccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCCCceecCCchhhhhhhhcCCCCccceEEEecccccCCCCCC
Q 004010 585 TTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYGPKLIQVITRIPARCPAKRP 664 (779)
Q Consensus 585 ~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~ 664 (779)
+||+++++.+ .+..+|+||+|+|||.+|++||||||++.+||+.|||+++|+..+++.+++....|.....
T Consensus 446 tTA~~~~~~~---------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~ 516 (621)
T 3vta_A 446 TTASPMNARF---------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNT 516 (621)
T ss_dssp HTCBCCCTTT---------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC----------------------------
T ss_pred hcCCcccccC---------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCc
Confidence 9999886543 4567899999999999999999999999999999999999999999999998888876543
Q ss_pred -CCCCCCccchhhhcccCCCCceeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 665 -RPENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 665 -~~~~lN~ps~~~~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
...+||||||++.+..... .+++|+|||||||+..+||+++++.| +|++|+|+|++|+|++.+|+++|+|||+..
T Consensus 517 ~~~~~lN~pS~~v~~~~~~~--~~~t~~rtvtnvg~~~~ty~~~v~~p-~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~- 592 (621)
T 3vta_A 517 GRVWDLNYPSFGLSVSPSQT--FNQYFNRTLTSVAPQASTYRAMISAP-QGLTISVNPNVLSFNGLGDRKSFTLTVRGS- 592 (621)
T ss_dssp -CGGGSCCSSEEEECCSSCC--EEEEEEEEEEECSSSCEEEEEEEECC-SSEEEEEESSEEEECSTTCEEEEEEEEEEC-
T ss_pred CcccccccccEEEEccCCCc--eEEEEEEEEEccCCCCeEEEEEEECC-CCcEEEEecCEEEEcCCCcEEEEEEEEEec-
Confidence 6789999999987554443 78999999999999999999999999 999999999999999999999999999864
Q ss_pred cccccCCCcceEEEEEEECCceEEEeEEEEEe
Q 004010 744 KNLVLNDSGAAFGSISWSDGKHEVRSPLVVTQ 775 (779)
Q Consensus 744 ~~~~~~~~~~~~G~~~~~~~~~~v~~P~~v~~ 775 (779)
..+.+ .||+|+|+|++|.||+||+|++
T Consensus 593 ----~~~~~-~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 593 ----IKGFV-VSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp ----CCSSE-EEEEEEEECSSCCCEEEEEEEC
T ss_pred ----CCCce-EEEEEEEEcCCEEEEeCEEEEE
Confidence 34566 9999999999999999999986
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.1e-84 Score=786.72 Aligned_cols=541 Identities=24% Similarity=0.329 Sum_probs=429.5
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccC----------CccCCceeeeeeeccccc
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFT----------AKNCNKKIIGARFFSKGH 192 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~----------~~~~n~kiig~~~~~~g~ 192 (779)
+.+|..+.+|+||+|||||||||++||+|.+ +..|++.|..+..|. ..+||+||+++++|..+.
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 4689999999999999999999999999984 457888886544332 347999999999887621
Q ss_pred cccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCC--CCH
Q 004010 193 EAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAG--CFD 270 (779)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~ 270 (779)
.++ |..||||||||||||+...+.+. .+.+.||||+|+|++||+|++. + +..
T Consensus 81 --------------------~~~-D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~-g~~~~~ 134 (926)
T 1xf1_A 81 --------------------KTA-VDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVN-GLADYA 134 (926)
T ss_dssp --------------------CCC-CSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCS-CHHHHH
T ss_pred --------------------CCC-CCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCC-CCCCcH
Confidence 122 88999999999999987554332 2446899999999999999877 5 566
Q ss_pred HHHHHHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCC-------------Ccc--
Q 004010 271 SDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG-------------MSV-- 335 (779)
Q Consensus 271 s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------------~~~-- 335 (779)
+++++||++|+++|+||||||||...+ ......+++..++++|.++||+||+||||+|+.. .++
T Consensus 135 ~~i~~Ai~~Ai~~gvdVIn~SlG~~~~-~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~ 213 (926)
T 1xf1_A 135 RNYAQAIRDAINLGAKVINMSFGNAAL-AYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGT 213 (926)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSCCC-TTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCS
T ss_pred HHHHHHHHHHHHhCCcEEEECCCCCCC-CccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecC
Confidence 789999999999999999999998732 1234567788899999999999999999999632 222
Q ss_pred ccCCCceEEeccCccCcceeeEEEe-CCCeEEEeEEeecCCCC-CCceEeEEecCCCCCcccccccCCCCCCCcccccEE
Q 004010 336 TNLAPWIVTVGAGTIDRNFPAEVRL-GDGRRLSGVSLYAGAPL-SEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIV 413 (779)
Q Consensus 336 ~~~~p~vitVgAst~d~~~~~~~~l-~~g~~~~g~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkiv 413 (779)
++.+||+|+|||++.++.+...+.+ +++....+.+++...++ ....+|+++.+. .|.+..+ .+++|||+
T Consensus 214 PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------g~~~~~~--~~v~Gkiv 284 (926)
T 1xf1_A 214 PAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------GTKEDDF--KDVKGKIA 284 (926)
T ss_dssp CTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------SCSTTTT--TTCTTSEE
T ss_pred cccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------CCCccch--hhcCCeEE
Confidence 3458999999999999999998887 66666666666544443 357899999754 3776655 68999999
Q ss_pred EEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCcc-ccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEeccee--e
Q 004010 414 ICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGL-VGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTI--L 490 (779)
Q Consensus 414 l~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~-~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~--~ 490 (779)
+|+|+.|.+.+|..+++++||.|+|++|+....... ......+|++.|+..+|+.|++ .+..+|.+..+. +
T Consensus 285 l~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~ 358 (926)
T 1xf1_A 285 LIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVL 358 (926)
T ss_dssp EEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEE
T ss_pred EEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceec
Confidence 999999999999999999999999999987543322 3455789999999999988773 345566666543 5
Q ss_pred cccCCCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHH--
Q 004010 491 GIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLK-- 568 (779)
Q Consensus 491 ~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~-- 568 (779)
.....+.++.||||||+. ++++||||+|||++|+++++.+ .|..+||||||||||||++|||+
T Consensus 359 ~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~ 423 (926)
T 1xf1_A 359 PTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQ 423 (926)
T ss_dssp ECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHH
T ss_pred ccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHH
Confidence 556678999999999995 4899999999999999999865 79999999999999999999995
Q ss_pred --hhCCCCCHHH----HHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCCCceecCCchhhhhhhhcC
Q 004010 569 --SAHPDWSPAA----IRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCAN 642 (779)
Q Consensus 569 --~~~P~~sp~~----Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~ 642 (779)
+.||+|+|+| ||++||+||+++.+.+ ....+++++||+|+||+.+|++|.+ |||..
T Consensus 424 ~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~ 485 (926)
T 1xf1_A 424 YETQYPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDK 485 (926)
T ss_dssp HHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEES
T ss_pred HhccCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcC
Confidence 5699999997 9999999999875432 1234678899999999999999854 67877
Q ss_pred CCCccceEEEecccccCCCCCCCCCCCCccchhhhcccCCCCceeEEEEEEEEecCCC--CeEEEEEEEc--CCCCeEEE
Q 004010 643 GYGPKLIQVITRIPARCPAKRPRPENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQP--NAVYTVKVVS--PEKGVTVT 718 (779)
Q Consensus 643 ~~~~~~~~~~~~~~~~c~~~~~~~~~lN~ps~~~~~~~~~~~~~~~t~~rtvtNvg~~--~~ty~~~~~~--p~~g~~v~ 718 (779)
++...+ ++++.+ . .+.+++|||||+|+. ..+|++.+.. | .+..++
T Consensus 486 ~~~~~~--------------------i~l~~~-----~-----~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~-~~~~~~ 534 (926)
T 1xf1_A 486 DNTSSK--------------------VHLNNV-----S-----DKFEVTVNVHNKSDKPQELYYQATVQTDKV-DGKHFA 534 (926)
T ss_dssp SSSCSC--------------------EEEEEE-----C-----SEEEEEEEEEECSSSCEEEEEEEEEEEEEE-ETTEEE
T ss_pred CCCcce--------------------eecccc-----C-----ccEEEEEEEEEeCCCceeEEEEEEEEeccC-CCceEE
Confidence 664332 222222 1 467889999999985 4578888765 6 788999
Q ss_pred EecCeeEeccC-------ceEEEEEEEEEeccc--cc---ccCCCcceEEEEEEE--CCceE-EEeEEEEEec
Q 004010 719 VKPSRLVFTEG-------VKKSSFVVTVTADSK--NL---VLNDSGAAFGSISWS--DGKHE-VRSPLVVTQL 776 (779)
Q Consensus 719 v~p~~l~~~~~-------g~~~~~~vt~~~~~~--~~---~~~~~~~~~G~~~~~--~~~~~-v~~P~~v~~~ 776 (779)
|+|..|.|..+ ||+++|+|||+.... .+ .+.+.+ +||+|+|+ ++.|. ||+||+++..
T Consensus 535 v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~-~~G~i~~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 535 LAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYF-LEGFVRFKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp EEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEE-EEEEEEEESSTTSCCCEEEEEEEEES
T ss_pred eccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcE-EEEEEEEEeCCCCCCEEEeeeEEEec
Confidence 99987776555 999999999997510 00 134456 89999999 56665 9999999865
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.3e-60 Score=547.44 Aligned_cols=367 Identities=31% Similarity=0.443 Sum_probs=286.9
Q ss_pred CCceEEEEeCCCCCCCCCcchHHHHHhhhCCCceeEEEecceeeEEEEEeCHHHHHHH-----------hCCCCeEEEEE
Q 004010 34 TVKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSPDQAASL-----------SRHPSVLAVIE 102 (779)
Q Consensus 34 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~~~~g~s~~l~~~~~~~L-----------~~~p~V~~V~~ 102 (779)
....|||+|++....+ ...++++. +. .+++++|+ .|+||+++++++++++| +++|+|++|++
T Consensus 34 ~~~~~iV~~~~~~~~~---~~~~~~~~-~g--~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~ 106 (539)
T 3afg_A 34 QEVSTIIMFDNQADKE---KAVEILDF-LG--AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQE 106 (539)
T ss_dssp CEEEEEEEESSHHHHH---HHHHHHHH-HT--CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEE
T ss_pred CceEEEEEECCCCCHH---HHHHHHHh-cC--CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEe
Confidence 4457999999754311 11122221 11 68999997 79999999999999999 88999999999
Q ss_pred cceecccccCC--CcccCCccccCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCc
Q 004010 103 DQRRQLHTTRS--PQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNK 180 (779)
Q Consensus 103 ~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~ 180 (779)
++.+++..... ...+.......+|..+.+|+||+|||||||||++||+|.+
T Consensus 107 d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~--------------------------- 159 (539)
T 3afg_A 107 DYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG--------------------------- 159 (539)
T ss_dssp CCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT---------------------------
T ss_pred cccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC---------------------------
Confidence 99988754321 1112223345789999999999999999999999999963
Q ss_pred eeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEE
Q 004010 181 KIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYK 260 (779)
Q Consensus 181 kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~k 260 (779)
++++.++|..+ ...+.|++||||||||||||+.... .|.+.||||+|+|+++|
T Consensus 160 ~i~~~~d~~~~--------------------~~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~k 212 (539)
T 3afg_A 160 KVIGWVDFVNG--------------------KTTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIK 212 (539)
T ss_dssp TEEEEEETTTC--------------------CSSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEE
T ss_pred CEeeeEECCCC--------------------CCCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEE
Confidence 45666666542 1346788999999999999975432 23358999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHhhhC----CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC--c
Q 004010 261 VCWKNAGCFDSDILAAFDAAVND----GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM--S 334 (779)
Q Consensus 261 v~~~~~g~~~s~i~~ai~~A~~~----gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~--~ 334 (779)
++++.+.++.+++++||+||+++ |++|||||||.. ......+.+..++.++.++|++||+||||+|+... .
T Consensus 213 v~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~---~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~ 289 (539)
T 3afg_A 213 VLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSS---QSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVG 289 (539)
T ss_dssp CSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCC---SCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCC
T ss_pred eecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCC---CCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCccc
Confidence 99987237889999999999986 999999999987 33445688999999999999999999999998644 4
Q ss_pred cccCCCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEE
Q 004010 335 VTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVI 414 (779)
Q Consensus 335 ~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl 414 (779)
.+...+++|+|||.+.
T Consensus 290 ~Pa~~~~vitVgA~~~---------------------------------------------------------------- 305 (539)
T 3afg_A 290 SPAAASKVITVGAVDK---------------------------------------------------------------- 305 (539)
T ss_dssp TTTTCSSSEEEEEECT----------------------------------------------------------------
T ss_pred CCccCCceEEEeeecC----------------------------------------------------------------
Confidence 5677889999988321
Q ss_pred EcCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccC
Q 004010 415 CDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKP 494 (779)
Q Consensus 415 ~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~ 494 (779)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCC
Q 004010 495 APVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDW 574 (779)
Q Consensus 495 ~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~ 574 (779)
.+.++.||||||+.+ +++||||+|||++|+++++...... +.....|..++|||||||||||++|||+|+||+|
T Consensus 306 ~~~~a~fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~ 379 (539)
T 3afg_A 306 YDVITDFSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSW 379 (539)
T ss_dssp TSCBCSSSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CcccccccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCCC
Confidence 126789999999974 8999999999999999986532110 0011259999999999999999999999999999
Q ss_pred CHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCCC
Q 004010 575 SPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPG 625 (779)
Q Consensus 575 sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~g 625 (779)
+|++||++|++||+++...+ ..++.||+|+||+.+|++..
T Consensus 380 s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 380 TPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp CHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred CHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 99999999999999864211 24568999999999999843
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=3.1e-58 Score=511.16 Aligned_cols=343 Identities=27% Similarity=0.350 Sum_probs=274.3
Q ss_pred CceEEEEeCCCCCCCCCcchHHHHHhhhCCCceeEEEecceeeEEEEEeCHHHHHHHhCCCCeEEEEEcceecccccCC-
Q 004010 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHTTRS- 113 (779)
Q Consensus 35 ~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s- 113 (779)
+.+|||+|+++... .+.+++ + ..+++++|. .+++|+++++++++++|+++|+|++|++++.++++....
T Consensus 2 ~~~~iV~~~~~~~~------~~~~~~-~--g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~ 71 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN------PHEVLG-I--GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSW 71 (395)
T ss_dssp EEEEEEEECTTTCC------HHHHHH-T--TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC
T ss_pred cEEEEEEECCCccH------HHHHHH-c--CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCc
Confidence 46899999987431 122221 1 168999998 599999999999999999999999999999998753221
Q ss_pred ----------CcccCCcc--ccCCccCCCCCCC--cEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCC
Q 004010 114 ----------PQFLGLRN--QQGLWSESDYGSD--VIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCN 179 (779)
Q Consensus 114 ----------~~~~g~~~--~~~~~~~~~~G~g--v~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n 179 (779)
...|++.. ...+|..+ +|+| |+|||||||||++||+|.++
T Consensus 72 ~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------------------- 125 (395)
T 2z2z_A 72 LGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------------------- 125 (395)
T ss_dssp ------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG-------------------------
T ss_pred ccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc-------------------------
Confidence 12344433 24689988 8999 99999999999999999742
Q ss_pred ceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEE
Q 004010 180 KKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVY 259 (779)
Q Consensus 180 ~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~ 259 (779)
++..++|..+... .+..++.|.+||||||||||+|.. ++ .| +.||||+|+|+.+
T Consensus 126 --~~~~~~~~~~~~~---------------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~ 179 (395)
T 2z2z_A 126 --IAWCVSTLRGKVS---------------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSV 179 (395)
T ss_dssp --EEEEEECGGGCCB---------------CCHHHHBCSSSHHHHHHHHHHCCC-SS---SS-----CCCSSTTCEEEEE
T ss_pred --cccCccccCCccc---------------CCCCCCCCCCCCHHHHHHHHHeec-CC---Cc-----eEEECCCCEEEEE
Confidence 3334444332100 001124678999999999999973 22 12 3799999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHhhhC--------------------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCc
Q 004010 260 KVCWKNAGCFDSDILAAFDAAVND--------------------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGV 319 (779)
Q Consensus 260 kv~~~~~g~~~s~i~~ai~~A~~~--------------------gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi 319 (779)
|++++.+.++.+++++||+||+++ +++|||||||... ....+..++.++.++|+
T Consensus 180 kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv 253 (395)
T 2z2z_A 180 RVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA------DDSYLYDMIIQAYNAGI 253 (395)
T ss_dssp ECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTC
T ss_pred EEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC------CCHHHHHHHHHHHHCCC
Confidence 999887237889999999999988 9999999999872 23567778888999999
Q ss_pred EEEEccCCCCCCCCccccCCCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCccccccc
Q 004010 320 FVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCM 399 (779)
Q Consensus 320 ~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~ 399 (779)
+||+||||+|.....++...|++|+|||.+.
T Consensus 254 ~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------------------- 284 (395)
T 2z2z_A 254 VIVAASGNEGAPSPSYPAAYPEVIAVGAIDS------------------------------------------------- 284 (395)
T ss_dssp EEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------------------------------------------
T ss_pred EEEEECCCCCCCCCCCccCCCCEEEEEEecC-------------------------------------------------
Confidence 9999999999887788888999999998321
Q ss_pred CCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCC
Q 004010 400 ENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANP 479 (779)
Q Consensus 400 ~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~ 479 (779)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhh
Q 004010 480 TATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPH 559 (779)
Q Consensus 480 ~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 559 (779)
.+.++.||+||| +|+|||++|+++++.+ .|..++||||||||
T Consensus 285 ---------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~ 326 (395)
T 2z2z_A 285 ---------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPH 326 (395)
T ss_dssp ---------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHH
T ss_pred ---------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHH
Confidence 126789999998 6799999999999875 89999999999999
Q ss_pred HHHHHHHHHhhCC-------------CCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCC
Q 004010 560 VSGAAALLKSAHP-------------DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 624 (779)
Q Consensus 560 VAG~aALl~~~~P-------------~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 624 (779)
|||++|||+|++| .|++++||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 327 VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~------------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 327 VSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC------------CCCCCccCceeCHHHHHHH
Confidence 9999999999999 999999999999999987421 2346899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2.3e-56 Score=508.76 Aligned_cols=357 Identities=19% Similarity=0.250 Sum_probs=273.4
Q ss_pred CceEEEEeCCCCCCCCCcchHHHHHhhhCCC-ceeEEEecceeeEEEEEeCHHHHHHHhC-CCCeEEEEEcceecccccC
Q 004010 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFASP-VQILHTYDTVFHGFSATLSPDQAASLSR-HPSVLAVIEDQRRQLHTTR 112 (779)
Q Consensus 35 ~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~y~~~~~g~s~~l~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~ 112 (779)
.+.|||++++... +.+.+++. .++++.|. .|++|+++++++++++|++ +|+|++|++++.+++..+.
T Consensus 44 ~~~yiv~~~~~~~----------~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~ 112 (471)
T 3t41_A 44 ELYYSVEYKNTAT----------FNKLVKKKSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEK 112 (471)
T ss_dssp CEEEEEEESCHHH----------HHHHHHHHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCC
T ss_pred ceEEEEEcCCHHH----------HHHHHHhCCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceecccccc
Confidence 5689998876431 22233322 67888886 5999999999999999999 9999999999988875433
Q ss_pred CC----------cccCCccc---cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCC
Q 004010 113 SP----------QFLGLRNQ---QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCN 179 (779)
Q Consensus 113 s~----------~~~g~~~~---~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n 179 (779)
.. ..|++..+ ..+|..+.+|+||+|||||||||++||+|.++- |.
T Consensus 113 ~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~--------------- 170 (471)
T 3t41_A 113 TIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------ST--------------- 170 (471)
T ss_dssp CCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CT---------------
T ss_pred ccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------cc---------------
Confidence 21 12333333 358999999999999999999999999998531 11
Q ss_pred ceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEE
Q 004010 180 KKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVY 259 (779)
Q Consensus 180 ~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~ 259 (779)
+.+.|..+........+ ...+...+.|..||||||||||+|+.. +.||||+|+|+.+
T Consensus 171 ----~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~ 227 (471)
T 3t41_A 171 ----DSKNLVPLNGFRGTEPE-------ETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMY 227 (471)
T ss_dssp ----TCEECCCTTCGGGCCTT-------CCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEE
T ss_pred ----CCcccccCCCccCCCcc-------cCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEE
Confidence 11111111100000000 012224567899999999999998631 4799999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHhhhCCCcEEEeccCCCCCC----CCC------CCCCHHHHHHHHHhcCCcEEEEccCCCC
Q 004010 260 KVCWKNAGCFDSDILAAFDAAVNDGVDVISISIGGGDGI----SSP------YYLDPIAIGSYGAASRGVFVSSSAGNDG 329 (779)
Q Consensus 260 kv~~~~~g~~~s~i~~ai~~A~~~gvdVIn~SlG~~~g~----~~~------~~~d~~~~a~~~a~~~Gi~vV~AAGN~G 329 (779)
|++++. .+..+++++||+||+++|++|||||||..... ..+ ...+.+..++..+.++|++||+||||+|
T Consensus 228 kv~~~~-~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g 306 (471)
T 3t41_A 228 RVFGSK-KTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDG 306 (471)
T ss_dssp ECCSSS-CCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred EeccCC-CCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 999886 78999999999999999999999999973100 000 1235677788888999999999999999
Q ss_pred CCCCc------------------cccCCCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCC
Q 004010 330 PNGMS------------------VTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSG 391 (779)
Q Consensus 330 ~~~~~------------------~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~ 391 (779)
..... .++..|++|+|||++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~----------------------------------------- 345 (471)
T 3t41_A 307 IDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ----------------------------------------- 345 (471)
T ss_dssp CBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT-----------------------------------------
T ss_pred cCCCcccccccccccccCCceeeccccCCCeEEEEeeCC-----------------------------------------
Confidence 86542 5677888999988321
Q ss_pred CcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHH
Q 004010 392 VLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKA 471 (779)
Q Consensus 392 ~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~ 471 (779)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCCCc----------------------EEeee
Q 004010 472 YISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVN----------------------ILAAW 529 (779)
Q Consensus 472 ~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~----------------------I~sa~ 529 (779)
.+.++.||++||+. |||+|||++ |++++
T Consensus 346 -----------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~ 395 (471)
T 3t41_A 346 -----------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA 395 (471)
T ss_dssp -----------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC
T ss_pred -----------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecC
Confidence 12678999999974 599999987 89888
Q ss_pred cCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCC-CCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCC
Q 004010 530 TEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHP-DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTP 608 (779)
Q Consensus 530 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 608 (779)
+.+ .|..++|||||||||||++|||+|++| +++|++||++|++||++... .++
T Consensus 396 ~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~ 449 (471)
T 3t41_A 396 NNG-------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPF 449 (471)
T ss_dssp TTS-------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCH
T ss_pred CCC-------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCc
Confidence 765 799999999999999999999999999 89999999999999987531 345
Q ss_pred CccCCCcccccccCCCC
Q 004010 609 YDFGAGHVNLDRAMDPG 625 (779)
Q Consensus 609 ~~~G~G~vn~~~Al~~g 625 (779)
..||+|+||+.+|++..
T Consensus 450 ~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 450 SRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHTTCBBCHHHHTTTT
T ss_pred CccccChhCHHHHHHHH
Confidence 68999999999999843
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=4.4e-56 Score=500.93 Aligned_cols=378 Identities=25% Similarity=0.360 Sum_probs=274.8
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
+.+|+.+ |+||+|+|||||||++||+|.++ ++..+++..
T Consensus 14 ~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~------------ 52 (441)
T 1y9z_A 14 TVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSG------------ 52 (441)
T ss_dssp SSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTT------------
T ss_pred hhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCC------------
Confidence 4688765 77999999999999999999742 111111111
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCC--eEEEEEeecCCCCCCHHHHHHHHHHh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKA--RLAVYKVCWKNAGCFDSDILAAFDAA 280 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~~g~~~s~i~~ai~~A 280 (779)
..+...+.|..||||||||||+|..++ .| +.||||+| +|+.+|+++..+.++.+++++||+||
T Consensus 53 ------~~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a 117 (441)
T 1y9z_A 53 ------TGNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTC 117 (441)
T ss_dssp ------SCCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHH
T ss_pred ------CCCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHH
Confidence 011234678899999999999997531 12 48999995 99999999887227888999999999
Q ss_pred hhC-CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcceee---
Q 004010 281 VND-GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPA--- 356 (779)
Q Consensus 281 ~~~-gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~--- 356 (779)
+++ |+||||||||... ....+..++.+|.++|++||+||||+|.....+++..|++|+|||.+.+.....
T Consensus 118 ~~~~g~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~ 191 (441)
T 1y9z_A 118 VNSGGANVVTMSLGGSG------STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQ 191 (441)
T ss_dssp HHTTCCSEEEECCCBSC------CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSC
T ss_pred HHhcCCcEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCcccc
Confidence 999 9999999999872 134567778889999999999999999888888899999999999887643211
Q ss_pred ----------------EEEeCCCe----EEEeEEeecCCCCC-CceEe--EEecCCC----CCcccccccCC--CCCCCc
Q 004010 357 ----------------EVRLGDGR----RLSGVSLYAGAPLS-EKMYP--LIYPGKS----GVLSASLCMEN--SLDPNL 407 (779)
Q Consensus 357 ----------------~~~l~~g~----~~~g~~~~~~~~~~-~~~~~--~v~~~~~----~~~~~~~C~~~--~~~~~~ 407 (779)
....+++. ++.|.+++....+. ...++ +.|.... .......|... .++..+
T Consensus 192 ~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~ 271 (441)
T 1y9z_A 192 YTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGN 271 (441)
T ss_dssp CCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCC
T ss_pred CCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCC
Confidence 11112222 22333333211100 00010 1111110 01123458754 467889
Q ss_pred ccccEEEEcCCCC-----chhhHHHHHHHcCceEEEEeccCCCCCc------cccCCcccCeEEEchhhHHHHHHHHhcC
Q 004010 408 VRGKIVICDRGSS-----PRVAKGLVVKKAGGVGMILANGISNGEG------LVGDAHLLPACALGSDEGDAVKAYISST 476 (779)
Q Consensus 408 ~~gkivl~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------~~~~~~~~p~~~v~~~~g~~l~~~~~~~ 476 (779)
++|||++|+|+.+ .+.+|..+++++||.|+|++|+...... .....+.+|.+.|+..+|+.|++|+.+.
T Consensus 272 ~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~ 351 (441)
T 1y9z_A 272 MANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS 351 (441)
T ss_dssp CTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE
T ss_pred ccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC
Confidence 9999999999876 6788999999999999999988653211 1234468999999999999998875321
Q ss_pred CCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccch
Q 004010 477 ANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMA 556 (779)
Q Consensus 477 ~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 556 (779)
. .+ ++... ..|..+||||||
T Consensus 352 ----~-----------------------------------t~--------~~~~~-------------~~y~~~sGTSmA 371 (441)
T 1y9z_A 352 ----T-----------------------------------TV--------SNQGN-------------QDYEYYNGTSMA 371 (441)
T ss_dssp ----E-----------------------------------EE--------EEEEE-------------ESEEEECSHHHH
T ss_pred ----c-----------------------------------cc--------ccccC-------------CCceeecccccC
Confidence 0 01 11111 179999999999
Q ss_pred hhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCCCceecCCchhhh
Q 004010 557 CPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYV 636 (779)
Q Consensus 557 aP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~ 636 (779)
||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ ||+
T Consensus 372 aP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~~~ 428 (441)
T 1y9z_A 372 TPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------AYL 428 (441)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------HHH
T ss_pred CcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------HHH
Confidence 99999999999999999999999999999999875432 2458999999999996 599
Q ss_pred hhhhcCCCC
Q 004010 637 NFLCANGYG 645 (779)
Q Consensus 637 ~~lc~~~~~ 645 (779)
.|||+.++.
T Consensus 429 ~~lc~~~~~ 437 (441)
T 1y9z_A 429 DESCTGPTD 437 (441)
T ss_dssp HHCTTCC--
T ss_pred HhhhcCCCC
Confidence 999998764
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.9e-58 Score=531.32 Aligned_cols=332 Identities=24% Similarity=0.279 Sum_probs=60.3
Q ss_pred CceEEEEeCCCCCCCCCcchHHHHHhhhCCC---ceeEEEecceeeEEEEEeCHHHHHHHhCCCCeEEEEEcceeccccc
Q 004010 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFASP---VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHTT 111 (779)
Q Consensus 35 ~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~ 111 (779)
+++|||+|+++........+.+++...+.+. .++++.|++.|+||+++++++++++|+++|+|++|+|++.++.+.
T Consensus 75 pg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~- 153 (692)
T 2p4e_P 75 PGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS- 153 (692)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC--
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC-
Confidence 4599999999876544444555555433221 689999999999999999999999999999999999999886521
Q ss_pred CCCcccCCccc------cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeee
Q 004010 112 RSPQFLGLRNQ------QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGA 185 (779)
Q Consensus 112 ~s~~~~g~~~~------~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~ 185 (779)
. .|++..+ ...|..+.+|+||+|+|||||||++||+|.++.. |. +|+
T Consensus 154 ~---pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~~----------- 206 (692)
T 2p4e_P 154 I---PWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DFE----------- 206 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C---CcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------ccc-----------
Confidence 2 2455433 1368888899999999999999999999975310 00 010
Q ss_pred eeccccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCC
Q 004010 186 RFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKN 265 (779)
Q Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~ 265 (779)
+... .++ ......+.|.+||||||||||+|+. .||||+|+|+++||+++.
T Consensus 207 --~~~d---~dg-----------~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~ 256 (692)
T 2p4e_P 207 --NVPE---EDG-----------TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ 256 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --cccC---CCC-----------CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCC
Confidence 0000 000 0001346789999999999999873 699999999999999887
Q ss_pred CCCCHHHHHHHHHHhhhC------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC-ccccC
Q 004010 266 AGCFDSDILAAFDAAVND------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNL 338 (779)
Q Consensus 266 ~g~~~s~i~~ai~~A~~~------gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ 338 (779)
+.++.+++++||+|++++ |++|||||||+. . ...+..++.++.++||+||+||||+|.... ..++.
T Consensus 257 G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~---~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~ 329 (692)
T 2p4e_P 257 GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG---Y----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPAS 329 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCC---C----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCccc
Confidence 337888999999999986 899999999976 2 244556666888999999999999998754 34778
Q ss_pred CCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCC
Q 004010 339 APWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRG 418 (779)
Q Consensus 339 ~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g 418 (779)
.|++|+|||++.+...
T Consensus 330 ~~~vItVGA~d~~~~~---------------------------------------------------------------- 345 (692)
T 2p4e_P 330 APEVITVGATNAQDQP---------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEEEcCCCCc----------------------------------------------------------------
Confidence 8999999995432100
Q ss_pred CCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCcc
Q 004010 419 SSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVV 498 (779)
Q Consensus 419 ~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~ 498 (779)
...-
T Consensus 346 ----------------------------------------------------------------------------a~~s 349 (692)
T 2p4e_P 346 ----------------------------------------------------------------------------VTLG 349 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0011
Q ss_pred ccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHH
Q 004010 499 ASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAA 578 (779)
Q Consensus 499 a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ 578 (779)
+.||+||| ||||+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|+|
T Consensus 350 s~fSn~G~--------~vDI~APG~~I~St~~~~~~-----------~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~q 410 (692)
T 2p4e_P 350 TLGTNFGR--------CVDLFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAE 410 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCCC--------ceeEEecCCcEEeeccCCCC-----------ceEeccchHHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 23899998 46999999999999986422 799999999999999999999999999999999
Q ss_pred HHHHHHhccccc
Q 004010 579 IRSAMMTTASIV 590 (779)
Q Consensus 579 Ik~~L~~TA~~~ 590 (779)
||++|++||.+.
T Consensus 411 Vk~~L~~tA~~~ 422 (692)
T 2p4e_P 411 LRQRLIHFSAKD 422 (692)
T ss_dssp ------------
T ss_pred HHHHHHHhcccc
Confidence 999999999864
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.8e-54 Score=499.19 Aligned_cols=375 Identities=23% Similarity=0.248 Sum_probs=272.6
Q ss_pred CCCCceEEEEeCCCCCCCCCcchHHHHHhhhCCCceeEEEecceeeEEEEEeCH----HHHHHHhC--CCCeEEEEEcce
Q 004010 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSP----DQAASLSR--HPSVLAVIEDQR 105 (779)
Q Consensus 32 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~~~~g~s~~l~~----~~~~~L~~--~p~V~~V~~~~~ 105 (779)
...+++|||+|++... ..+.++ .+. .++.+.+. .+++++++++. +.+++|++ +|+|++|||+..
T Consensus 28 ~~~~~~~IV~~k~~~~------~~~~~~-~~g--~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~ 97 (671)
T 1r6v_A 28 EYTEGKILVGYNDRSE------VDKIVK-AVN--GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYK 97 (671)
T ss_dssp SBCTTEEEEEESSHHH------HHHHHH-HHT--CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBC
T ss_pred ccCCccEEEEECCCcC------HHHHHH-hcC--CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeE
Confidence 3458999999997532 112222 122 56777776 68999999864 33567764 899999999987
Q ss_pred eccccc----C-----------------------CCcccCCccc--cCC-ccCCCCCCCcEEEEEecCCCCCCCCcccCC
Q 004010 106 RQLHTT----R-----------------------SPQFLGLRNQ--QGL-WSESDYGSDVIIGVFDTGIWPERRSFSDLN 155 (779)
Q Consensus 106 ~~~~~~----~-----------------------s~~~~g~~~~--~~~-~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~ 155 (779)
+++... . ....|++..+ ..+ |+. .+|+||+|||||||||++||+|.++-
T Consensus 98 ~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~ 176 (671)
T 1r6v_A 98 RELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV 176 (671)
T ss_dssp CEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB
T ss_pred EEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE
Confidence 654310 0 0112333322 335 888 88999999999999999999997531
Q ss_pred CCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccC
Q 004010 156 IGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAF 235 (779)
Q Consensus 156 ~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~ 235 (779)
+.+ +.+..+... + ...+..|.+||||||||||||.. +
T Consensus 177 -------~~g--------------------~~~~~~~~~--------------p-~~~d~~d~~gHGThVAGiIAa~~-n 213 (671)
T 1r6v_A 177 -------IAG--------------------YRPAFDEEL--------------P-AGTDSSYGGSAGTHVAGTIAAKK-D 213 (671)
T ss_dssp -------CCE--------------------EEGGGTEEE--------------C-TTCBCCTTCSHHHHHHHHHHCCC-S
T ss_pred -------Eec--------------------ccccCCCcC--------------C-CCCCCccCCCcchhhhhhhhccC-C
Confidence 111 111110000 0 01223467899999999999973 2
Q ss_pred CCccccccccceeeeCCCCeEEEEEeecC-----CCC-CCHHHHHHHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHH
Q 004010 236 RASMEGYAAGVAKGVAPKARLAVYKVCWK-----NAG-CFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAI 309 (779)
Q Consensus 236 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~-----~~g-~~~s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~ 309 (779)
+ .| +.||||+|+|+++|+++. ..+ ...+.+++||+||+++|++|||||||... +...+..
T Consensus 214 g---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~------~s~~l~~ 279 (671)
T 1r6v_A 214 G---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG------YSYTMKE 279 (671)
T ss_dssp S---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC------CCHHHHH
T ss_pred C---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC------CCHHHHH
Confidence 2 12 379999999999999986 212 34567899999999999999999999862 3457788
Q ss_pred HHHHHhcCCcEEEEccCCCCCCC-CccccCCCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecC
Q 004010 310 GSYGAASRGVFVSSSAGNDGPNG-MSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPG 388 (779)
Q Consensus 310 a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~ 388 (779)
++.+|.++|++||+||||+|... ..+++..|++|+|||.+.+..
T Consensus 280 Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~----------------------------------- 324 (671)
T 1r6v_A 280 AFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG----------------------------------- 324 (671)
T ss_dssp HHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-----------------------------------
T ss_pred HHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-----------------------------------
Confidence 88899999999999999999875 567788899999998432110
Q ss_pred CCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHH
Q 004010 389 KSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDA 468 (779)
Q Consensus 389 ~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~ 468 (779)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCC-----CCCCCc
Q 004010 469 VKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTG-----LDSDLR 543 (779)
Q Consensus 469 l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~-----~~~~~~ 543 (779)
...++.|||+||.. ||+|||++|+++++....... ......
T Consensus 325 --------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~ 370 (671)
T 1r6v_A 325 --------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATN 370 (671)
T ss_dssp --------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSS
T ss_pred --------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccC
Confidence 01478999999974 999999999999876421100 001112
Q ss_pred cceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 544 KTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 544 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
...|..++|||||||||||++|||+|++|+|+|++||++|++||+++... ..+..||+|+||+.+|++
T Consensus 371 ~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~------------g~d~~~G~G~vna~~Al~ 438 (671)
T 1r6v_A 371 GGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN------------GWDHDTGYGLVKLDAALQ 438 (671)
T ss_dssp SCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS------------SCBTTTBTCBCCHHHHHH
T ss_pred CCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC------------CCCCCcccceeCHHHHhh
Confidence 34799999999999999999999999999999999999999999987432 234589999999999999
Q ss_pred CCceecCCchhh
Q 004010 624 PGLVYDITNDDY 635 (779)
Q Consensus 624 ~glv~d~~~~dy 635 (779)
..|..+....||
T Consensus 439 ~~l~~~~~~~~~ 450 (671)
T 1r6v_A 439 GPLPTQGGVEEF 450 (671)
T ss_dssp CCCCSSSEEEEE
T ss_pred hhcCCCCCccce
Confidence 888776655444
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=9.1e-51 Score=430.00 Aligned_cols=266 Identities=31% Similarity=0.382 Sum_probs=214.0
Q ss_pred ccCCccc--cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeecccccc
Q 004010 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (779)
Q Consensus 116 ~~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~ 193 (779)
.|++..+ ..+|+.+..|+||+|+|||||||++||+|.+ +++..++|...
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~~~-- 62 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVDN-- 62 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTTT--
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc---------------------------CcccceeccCC--
Confidence 3555544 4589998878899999999999999999964 23444444431
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHH
Q 004010 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (779)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i 273 (779)
..++.|..||||||||||+|...+... +.||||+|+|+.+|+++..+.+..+++
T Consensus 63 ------------------~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i 116 (280)
T 1dbi_A 63 ------------------DYDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDI 116 (280)
T ss_dssp ------------------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHH
T ss_pred ------------------CCCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHH
Confidence 124578899999999999998644322 379999999999999987734788999
Q ss_pred HHHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcc
Q 004010 274 LAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRN 353 (779)
Q Consensus 274 ~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~ 353 (779)
++||+||+++|++|||||||... ....+..++.++.++|++||+||||+|......+...|++|+|||.+.
T Consensus 117 ~~ai~~a~~~g~~Vin~S~G~~~------~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--- 187 (280)
T 1dbi_A 117 ADAIIYAADSGAEVINLSLGCDC------HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ--- 187 (280)
T ss_dssp HHHHHHHHHTTCSEEEECCSSCC------CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT---
T ss_pred HHHHHHHHHCCCCEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC---
Confidence 99999999999999999999872 245678888899999999999999999877777888899999998321
Q ss_pred eeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcC
Q 004010 354 FPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAG 433 (779)
Q Consensus 354 ~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~G 433 (779)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCC
Q 004010 434 GVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEI 513 (779)
Q Consensus 434 a~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~ 513 (779)
.+.++.||++||.
T Consensus 188 -------------------------------------------------------------~~~~~~~S~~G~~------ 200 (280)
T 1dbi_A 188 -------------------------------------------------------------YDRLASFSNYGTW------ 200 (280)
T ss_dssp -------------------------------------------------------------TSCBCTTBCCSTT------
T ss_pred -------------------------------------------------------------CCCcCCCCCCCCC------
Confidence 1267899999985
Q ss_pred CCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC
Q 004010 514 LKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNS 593 (779)
Q Consensus 514 lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~ 593 (779)
|||+|||++|+++++.+ .|..++|||||||||||++|||++ |+++++|||++|++||+++..
T Consensus 201 --~dv~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~- 262 (280)
T 1dbi_A 201 --VDVVAPGVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG- 262 (280)
T ss_dssp --CCEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-
T ss_pred --ceEEEecCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-
Confidence 49999999999998765 899999999999999999999987 899999999999999998742
Q ss_pred CCCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 594 NQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
....||+|+||+.+|++
T Consensus 263 -------------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -------------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -------------BTTTBSSEECCHHHHHT
T ss_pred -------------CCCcccCCEECHHHHhc
Confidence 12479999999999986
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=6.1e-51 Score=428.60 Aligned_cols=262 Identities=35% Similarity=0.490 Sum_probs=218.7
Q ss_pred cCCccc--cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccc
Q 004010 117 LGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (779)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (779)
|++..+ +.+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 6 W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~--- 52 (269)
T 1gci_A 6 WGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG--- 52 (269)
T ss_dssp HHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT---
T ss_pred cChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC---
Confidence 444433 4589999999999999999999 8999994 1222333321
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHH
Q 004010 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (779)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (779)
...+.|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++....+..++++
T Consensus 53 -----------------~~~~~d~~gHGT~vAgiia~~~-~~---~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 106 (269)
T 1gci_A 53 -----------------EPSTQDGNGHGTHVAGTIAALN-NS---IG-----VLGVAPSAELYAVKVLGASGSGSVSSIA 106 (269)
T ss_dssp -----------------CCSCSCSSSHHHHHHHHHHCCC-SS---SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHH
T ss_pred -----------------CCCCCCCCCChHHHHHHHhcCc-CC---CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHH
Confidence 0235678999999999999973 11 12 3799999999999999876347788999
Q ss_pred HHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcce
Q 004010 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNF 354 (779)
Q Consensus 275 ~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~ 354 (779)
+||+||++++++|||||||... ....+..++.++.++|++||+||||+|.....++...|++|+|||.+.
T Consensus 107 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~---- 176 (269)
T 1gci_A 107 QGLEWAGNNGMHVANLSLGSPS------PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ---- 176 (269)
T ss_dssp HHHHHHHHTTCSEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT----
T ss_pred HHHHHHHHCCCeEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC----
Confidence 9999999999999999999872 235677888889999999999999999887788888999999998321
Q ss_pred eeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCc
Q 004010 355 PAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGG 434 (779)
Q Consensus 355 ~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga 434 (779)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCC
Q 004010 435 VGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEIL 514 (779)
Q Consensus 435 ~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~l 514 (779)
.+.++.||++||.
T Consensus 177 ------------------------------------------------------------~~~~~~~S~~G~~------- 189 (269)
T 1gci_A 177 ------------------------------------------------------------NNNRASFSQYGAG------- 189 (269)
T ss_dssp ------------------------------------------------------------TSCBCTTCCCSTT-------
T ss_pred ------------------------------------------------------------CCCCCCCCCCCCC-------
Confidence 1257899999996
Q ss_pred CCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCC
Q 004010 515 KPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSN 594 (779)
Q Consensus 515 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~ 594 (779)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||+++.
T Consensus 190 -~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--- 252 (269)
T 1gci_A 190 -LDIVAPGVNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--- 252 (269)
T ss_dssp -EEEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---
T ss_pred -cceEecCCCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---
Confidence 49999999999998765 8999999999999999999999999999999999999999999762
Q ss_pred CCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 595 QPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 595 ~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
.+..||+|+||+.+|++
T Consensus 253 ------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ------------CHHHHTTCBCCHHHHTC
T ss_pred ------------CCCCcccCccCHHHHcC
Confidence 24589999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=5e-51 Score=430.89 Aligned_cols=263 Identities=32% Similarity=0.510 Sum_probs=216.7
Q ss_pred cCCccc--cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccc
Q 004010 117 LGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (779)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (779)
|+++.+ +.+|..+++|+||+|+|||||||++||+|+ ++..++|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~--- 53 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAG--- 53 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTT---
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCC---
Confidence 444433 458999999999999999999999999994 1222333321
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHH
Q 004010 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (779)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (779)
...+.|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+.+..++++
T Consensus 54 -----------------~~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~ 107 (274)
T 1r0r_E 54 -----------------EAYNTDGNGHGTHVAGTVAALDN-T---TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIV 107 (274)
T ss_dssp -----------------CCTTCCSSSHHHHHHHHHHCCSS-S---SB-----CCCSSTTSEEEEEECSCTTSEECHHHHH
T ss_pred -----------------CCCCCCCCCCHHHHHHHHHccCC-C---Cc-----eEEECCCCEEEEEEEECCCCCccHHHHH
Confidence 01246789999999999999631 1 12 3799999999999999876237788999
Q ss_pred HHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCC----CccccCCCceEEeccCcc
Q 004010 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG----MSVTNLAPWIVTVGAGTI 350 (779)
Q Consensus 275 ~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgAst~ 350 (779)
+||+||++++++|||||||... ..+.+..++.++.++|++||+||||+|... ..++...|++|+|||.+.
T Consensus 108 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~ 181 (274)
T 1r0r_E 108 SGIEWATTNGMDVINMSLGGAS------GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS 181 (274)
T ss_dssp HHHHHHHHTTCSEEEECEEBSS------CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT
T ss_pred HHHHHHHHcCCCEEEeCCCCCC------CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC
Confidence 9999999999999999999872 245678888899999999999999999763 345677788999988321
Q ss_pred CcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHH
Q 004010 351 DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVK 430 (779)
Q Consensus 351 d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 430 (779)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCC
Q 004010 431 KAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLN 510 (779)
Q Consensus 431 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~ 510 (779)
.+.++.||++||.
T Consensus 182 ----------------------------------------------------------------~~~~~~~S~~G~~--- 194 (274)
T 1r0r_E 182 ----------------------------------------------------------------NSNRASFSSVGAE--- 194 (274)
T ss_dssp ----------------------------------------------------------------TSCBCTTCCCSTT---
T ss_pred ----------------------------------------------------------------CCCcCccCCCCCC---
Confidence 1267889999985
Q ss_pred CCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 004010 511 PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 590 (779)
Q Consensus 511 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~ 590 (779)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||+++
T Consensus 195 -----~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (274)
T 1r0r_E 195 -----LEVMAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYL 256 (274)
T ss_dssp -----EEEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCC
T ss_pred -----ceEEeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCccc
Confidence 59999999999998765 899999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 591 DNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
. .+..||+|+||+.+|++
T Consensus 257 g---------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 257 G---------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp S---------------CHHHHTTCBCCHHHHTC
T ss_pred C---------------CCCCcccCccCHHHHhC
Confidence 2 34589999999999985
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.3e-52 Score=459.58 Aligned_cols=308 Identities=22% Similarity=0.216 Sum_probs=197.9
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|+.+..|++|+|||||||||++||+|++....+....|+..++....... ..+..+.. ....++.......
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~--- 94 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRD--QGLKGKEKEEALE--- 94 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHH--HTCCSHHHHHHHH---
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccC--ccccccccccccc---
Confidence 46899999899999999999999999999987666667777765543211000 00000000 0000000000000
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCC-----CCCHHHHHHHH
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-----GCFDSDILAAF 277 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~-----g~~~s~i~~ai 277 (779)
+...+..++.|.+||||||||||||+.++ .+.||||+|+|+.+|++.... .+...++++||
T Consensus 95 ----~~~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai 160 (357)
T 4h6x_A 95 ----AVIPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAI 160 (357)
T ss_dssp ----HHCTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHH
T ss_pred ----cccCCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHH
Confidence 00001123457789999999999997532 247999999999999975431 13456788999
Q ss_pred HHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcceeeE
Q 004010 278 DAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAE 357 (779)
Q Consensus 278 ~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~ 357 (779)
+||++.|++|||||||... ......+.+..++.++.++|++||+||||+|.....+++..|++|+|||.+.
T Consensus 161 ~~a~~~g~~Vin~S~G~~~--~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------- 231 (357)
T 4h6x_A 161 DLALELGANIIHCAFCRPT--QTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV------- 231 (357)
T ss_dssp HHHHHTTCSEEEEC-------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-------
T ss_pred HHHHHcCCCEEeeccccCC--ccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-------
Confidence 9999999999999999863 2334467788888899999999999999999888888888999999998321
Q ss_pred EEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEE
Q 004010 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (779)
Q Consensus 358 ~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 437 (779)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCe
Q 004010 438 ILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPD 517 (779)
Q Consensus 438 i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 517 (779)
.+.++.|||||+. ..|||
T Consensus 232 ---------------------------------------------------------~~~~~~fSn~G~~-----~~~~d 249 (357)
T 4h6x_A 232 ---------------------------------------------------------DGTPCHFSNWGGN-----NTKEG 249 (357)
T ss_dssp ---------------------------------------------------------TSSBCTTCC---C-----TTTTE
T ss_pred ---------------------------------------------------------CCcccccccCCCC-----CCccc
Confidence 1367899999975 45899
Q ss_pred EEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHhccccccCC
Q 004010 518 LIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA----HPDWSPAAIRSAMMTTASIVDNS 593 (779)
Q Consensus 518 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~Ik~~L~~TA~~~~~~ 593 (779)
|+|||++|+++++.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 250 i~APG~~i~s~~~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~ 317 (357)
T 4h6x_A 250 ILAPGEEILGAQPCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE 317 (357)
T ss_dssp EEEECSSEEECCTTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------
T ss_pred eeecCCCeEeccCCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC
Confidence 9999999999987652 5778999999999999999999964 56899999999999999987421
Q ss_pred CCCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 594 NQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
....+.+||+|+||+.+|++
T Consensus 318 ----------~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 ----------VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp -----------------CTTCBCCHHHHHH
T ss_pred ----------CCCCcccceeEEecHHHHHH
Confidence 22345689999999999986
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.1e-50 Score=429.50 Aligned_cols=265 Identities=33% Similarity=0.497 Sum_probs=217.4
Q ss_pred cCCccc--cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccc
Q 004010 117 LGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (779)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (779)
|++..+ ..+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~--- 53 (281)
T 1to2_E 6 YGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPS--- 53 (281)
T ss_dssp HHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTT---
T ss_pred cchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCC---
Confidence 444433 4589999999999999999999999999942 222233221
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHH
Q 004010 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (779)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (779)
+.....|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+.+..++++
T Consensus 54 ----------------~~~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~ 108 (281)
T 1to2_E 54 ----------------ETNPFQDNNSHGTHVAGTVAALNN-S---IG-----VLGVAPSASLYAVKVLGADGSGQYSWII 108 (281)
T ss_dssp ----------------CCCTTCCSSSHHHHHHHHHHCCSS-S---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHH
T ss_pred ----------------CCCCCCCCCCcHHHHHHHHhccCC-C---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHH
Confidence 001235789999999999999731 1 12 3799999999999999876236788999
Q ss_pred HHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCC----CccccCCCceEEeccCcc
Q 004010 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG----MSVTNLAPWIVTVGAGTI 350 (779)
Q Consensus 275 ~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgAst~ 350 (779)
++|+||++++++|||||||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||.+.
T Consensus 109 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~ 182 (281)
T 1to2_E 109 NGIEWAIANNMDVINMSLGGPS------GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS 182 (281)
T ss_dssp HHHHHHHHTTCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT
T ss_pred HHHHHHHHCCCcEEEECCcCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC
Confidence 9999999999999999999872 246778888889999999999999999763 345677788999987321
Q ss_pred CcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHH
Q 004010 351 DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVK 430 (779)
Q Consensus 351 d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 430 (779)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCC
Q 004010 431 KAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLN 510 (779)
Q Consensus 431 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~ 510 (779)
.+.++.||++||.
T Consensus 183 ----------------------------------------------------------------~~~~~~fS~~G~~--- 195 (281)
T 1to2_E 183 ----------------------------------------------------------------SNQRASFSSVGPE--- 195 (281)
T ss_dssp ----------------------------------------------------------------TSCBCTTCCCSTT---
T ss_pred ----------------------------------------------------------------CCCcCCcCCCCCC---
Confidence 1267899999995
Q ss_pred CCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 004010 511 PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 590 (779)
Q Consensus 511 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~ 590 (779)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||+++
T Consensus 196 -----~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 257 (281)
T 1to2_E 196 -----LDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKL 257 (281)
T ss_dssp -----CCEEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCC
T ss_pred -----ceEEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCccc
Confidence 49999999999998765 899999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCccCCCCCCCCCccCCCcccccccCCC
Q 004010 591 DNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 624 (779)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 624 (779)
. .++.||+|+||+.+|+++
T Consensus 258 g---------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 258 G---------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp S---------------CHHHHTTCBCCHHHHTSS
T ss_pred C---------------CCCCcccceecHHHHhhh
Confidence 2 345899999999999975
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.3e-49 Score=421.21 Aligned_cols=258 Identities=29% Similarity=0.409 Sum_probs=216.9
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|+.. +|+||+|+|||||||++||+|.+ +++..++|..+
T Consensus 21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~----------- 61 (279)
T 1thm_A 21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDN----------- 61 (279)
T ss_dssp HHHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTT-----------
T ss_pred HHHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccCC-----------
Confidence 4588887 69999999999999999999974 24444444431
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (779)
...+.|..||||||||||+|...++.. +.||||+|+|+.+|+++..+.++.+++++||+||++
T Consensus 62 ---------~~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~ 124 (279)
T 1thm_A 62 ---------DSTPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAAD 124 (279)
T ss_dssp ---------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHH
Confidence 124578899999999999998654322 379999999999999987734788899999999999
Q ss_pred CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcceeeEEEeCC
Q 004010 283 DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGD 362 (779)
Q Consensus 283 ~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~l~~ 362 (779)
+|++|||||||... ..+.+..++.++.++|++||+||||+|.....++...|++|+|||.+.
T Consensus 125 ~g~~Vin~S~G~~~------~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------ 186 (279)
T 1thm_A 125 QGAKVISLSLGGTV------GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------ 186 (279)
T ss_dssp TTCSEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT------------
T ss_pred CCCCEEEEecCCCC------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC------------
Confidence 99999999999872 245678888899999999999999999887788888899999998321
Q ss_pred CeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEecc
Q 004010 363 GRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANG 442 (779)
Q Consensus 363 g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 442 (779)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCC
Q 004010 443 ISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPG 522 (779)
Q Consensus 443 ~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG 522 (779)
.+.++.||++||. |||+|||
T Consensus 187 ----------------------------------------------------~~~~~~fS~~G~~--------~dv~APG 206 (279)
T 1thm_A 187 ----------------------------------------------------NDNKSSFSTYGSW--------VDVAAPG 206 (279)
T ss_dssp ----------------------------------------------------TSCBCTTCCCCTT--------CCEEEEC
T ss_pred ----------------------------------------------------CCCcCCcCCCCCc--------eEEEEcC
Confidence 1257899999986 4999999
Q ss_pred CcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCCccCC
Q 004010 523 VNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEAT 602 (779)
Q Consensus 523 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~ 602 (779)
++|+++++.+ .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 207 ~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-------- 263 (279)
T 1thm_A 207 SSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-------- 263 (279)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------
T ss_pred CCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------
Confidence 9999999765 8999999999999999999999 5899999999999999999874321
Q ss_pred CCCCCCCccCCCcccccccCC
Q 004010 603 GNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 603 ~~~~~~~~~G~G~vn~~~Al~ 623 (779)
..||+|+||+.+|++
T Consensus 264 ------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 ------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTBSSEECCHHHHHH
T ss_pred ------ccccCCeeCHHHHhc
Confidence 379999999999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.6e-50 Score=437.51 Aligned_cols=271 Identities=29% Similarity=0.412 Sum_probs=216.9
Q ss_pred ccCCccc--cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeecccccc
Q 004010 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (779)
Q Consensus 116 ~~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~ 193 (779)
.|+++.+ ..+|+.+++|+||+|||||||||++||+|.+ +++..++|...+.
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~ 74 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYG 74 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGG
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCC
Confidence 3555443 4689999999999999999999999999974 3444555554321
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHH
Q 004010 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (779)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i 273 (779)
. +...+.|..||||||||||+|.. ++. | +.||||+|+|+.+|+++..+.+..+++
T Consensus 75 ~----------------~~~~~~d~~gHGT~VAgiia~~~-~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i 129 (327)
T 2x8j_A 75 G----------------DETNFSDNNGHGTHVAGTVAAAE-TGS---G-----VVGVAPKADLFIIKALSGDGSGEMGWI 129 (327)
T ss_dssp G----------------CTTCCCCSSSHHHHHHHHHHCCC-CSS---B-----CCCSSTTCEEEEEECSCTTSEECHHHH
T ss_pred C----------------CCCCCCCCCCchHHHHHHHhccC-CCC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHH
Confidence 1 11235688999999999999973 221 1 379999999999999987723778899
Q ss_pred HHHHHHhhh------CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCC-----CccccCCCce
Q 004010 274 LAAFDAAVN------DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG-----MSVTNLAPWI 342 (779)
Q Consensus 274 ~~ai~~A~~------~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~v 342 (779)
++||+||++ .+++|||||||... ....+..++.++.++|++||+||||+|... ..++...|++
T Consensus 130 ~~ai~~a~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~v 203 (327)
T 2x8j_A 130 AKAIRYAVDWRGPKGEQMRIITMSLGGPT------DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEV 203 (327)
T ss_dssp HHHHHHHHHCCCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTS
T ss_pred HHHHHHHHhhcccccCCceEEEECCCcCC------CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCE
Confidence 999999999 89999999999872 245677888889999999999999999752 3566778899
Q ss_pred EEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCch
Q 004010 343 VTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPR 422 (779)
Q Consensus 343 itVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~ 422 (779)
|+|||.+.
T Consensus 204 i~Vga~~~------------------------------------------------------------------------ 211 (327)
T 2x8j_A 204 IAVGAVDF------------------------------------------------------------------------ 211 (327)
T ss_dssp EEEEEECT------------------------------------------------------------------------
T ss_pred EEEEEECC------------------------------------------------------------------------
Confidence 99998321
Q ss_pred hhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCcccccc
Q 004010 423 VAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFS 502 (779)
Q Consensus 423 ~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fS 502 (779)
.+.++.||
T Consensus 212 ------------------------------------------------------------------------~~~~~~fS 219 (327)
T 2x8j_A 212 ------------------------------------------------------------------------DLRLSDFT 219 (327)
T ss_dssp ------------------------------------------------------------------------TCCBSCC-
T ss_pred ------------------------------------------------------------------------CCCCCCcc
Confidence 12678999
Q ss_pred CCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhh-----CCCCCHH
Q 004010 503 ARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA-----HPDWSPA 577 (779)
Q Consensus 503 s~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~~sp~ 577 (779)
++||. |||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.
T Consensus 220 ~~G~~--------~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~ 278 (327)
T 2x8j_A 220 NTNEE--------IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSET 278 (327)
T ss_dssp --CCC--------CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred CCCCC--------ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHH
Confidence 99984 59999999999998765 7999999999999999999999999 9999999
Q ss_pred HHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 578 AIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 578 ~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
+||++|++||+++. .++..||+|+||+.+|++
T Consensus 279 ~v~~~L~~tA~~~g--------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 279 EIYAQLVRRATPIG--------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHHHHTTEECCS--------------SCHHHHTTCEECTTHHHH
T ss_pred HHHHHHHHhCccCC--------------CCCCceeeeEECHHHHHH
Confidence 99999999999763 134589999999999987
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.5e-50 Score=429.65 Aligned_cols=266 Identities=25% Similarity=0.271 Sum_probs=210.0
Q ss_pred CCCC-CCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCCCCCCC
Q 004010 129 SDYG-SDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGIN 207 (779)
Q Consensus 129 ~~~G-~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~ 207 (779)
..+| +||+|||||||||++||+|.++ ++..+.+..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~----------------- 38 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLA----------------- 38 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSS-----------------
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCC-----------------
Confidence 3568 7999999999999999999753 111111111
Q ss_pred CccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCC-CCCHHHHHHHHHHhhhCCCc
Q 004010 208 ETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-GCFDSDILAAFDAAVNDGVD 286 (779)
Q Consensus 208 ~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~-g~~~s~i~~ai~~A~~~gvd 286 (779)
........|.+||||||||||+|+..+ .+.||||+|+|+.+|++.+.. ..+..++++||+||++.+++
T Consensus 39 -~~~~~~d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~ 107 (282)
T 3zxy_A 39 -PTAARSDGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAH 107 (282)
T ss_dssp -CCCCCTTCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCS
T ss_pred -CCCCCCCCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCe
Confidence 001122335679999999999997532 147999999999999986542 36778899999999999999
Q ss_pred EEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcceeeEEEeCCCeEE
Q 004010 287 VISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRL 366 (779)
Q Consensus 287 VIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~ 366 (779)
|||||||... ........+..++.++.++|++||+||||+|......+...|++|+|||.+.
T Consensus 108 Vin~S~G~~~--~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~---------------- 169 (282)
T 3zxy_A 108 IINISGGELT--DFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD---------------- 169 (282)
T ss_dssp EEEECCCEEE--SSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT----------------
T ss_pred EEeccCcccc--ccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC----------------
Confidence 9999999762 2223345677788889999999999999999888888888999999998321
Q ss_pred EeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCC
Q 004010 367 SGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNG 446 (779)
Q Consensus 367 ~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~ 446 (779)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCCCcEE
Q 004010 447 EGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNIL 526 (779)
Q Consensus 447 ~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~ 526 (779)
.+.++.||+||+. ..||||+|||.+|+
T Consensus 170 ------------------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~ 196 (282)
T 3zxy_A 170 ------------------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDIL 196 (282)
T ss_dssp ------------------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEE
T ss_pred ------------------------------------------------CCccccccCCCCC-----ccccceeccCccee
Confidence 1267889999985 46899999999999
Q ss_pred eeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhC----CCCCHHHHHHHHHhccccccCCCCCCCccCC
Q 004010 527 AAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAH----PDWSPAAIRSAMMTTASIVDNSNQPMTDEAT 602 (779)
Q Consensus 527 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~----P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~ 602 (779)
++++.+ .|..++|||||||||||++|||++++ |.++|+|||++|++||++++.
T Consensus 197 s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~---------- 253 (282)
T 3zxy_A 197 GAKPGG-------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD---------- 253 (282)
T ss_dssp EECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC------------
T ss_pred eecCCC-------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------
Confidence 998876 79999999999999999999999875 789999999999999987643
Q ss_pred CCCCCCCccCCCcccccccCC
Q 004010 603 GNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 603 ~~~~~~~~~G~G~vn~~~Al~ 623 (779)
..+.....||+|+||+.+|++
T Consensus 254 ~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 254 DAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp -----CGGGTTCBCCHHHHHH
T ss_pred CCCCccCceeeeEeCHHHHHH
Confidence 123345589999999999986
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.5e-49 Score=425.10 Aligned_cols=287 Identities=29% Similarity=0.384 Sum_probs=225.0
Q ss_pred cCCcc--ccCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccc
Q 004010 117 LGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (779)
Q Consensus 117 ~g~~~--~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (779)
|+++. ...+|..+.+|+||+|+|||||||++||+|.++ +...++|....
T Consensus 8 W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~-- 58 (310)
T 2ixt_A 8 WGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGAT-- 58 (310)
T ss_dssp HHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSS--
T ss_pred CchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCC--
Confidence 44443 357899999999999999999999999999742 33344444321
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHH
Q 004010 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (779)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (779)
........|..||||||||||+|....+ ...+.||||+|+|+.+|++++.+.++.++++
T Consensus 59 --------------~~~~~~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 117 (310)
T 2ixt_A 59 --------------TPINNSCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIA 117 (310)
T ss_dssp --------------SCEETCCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHH
T ss_pred --------------CCCCCCCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHH
Confidence 0111335678999999999999875221 1124799999999999999877336888999
Q ss_pred HHHHHhhhCCC-----cEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCC--CCccccCCCceEEecc
Q 004010 275 AAFDAAVNDGV-----DVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN--GMSVTNLAPWIVTVGA 347 (779)
Q Consensus 275 ~ai~~A~~~gv-----dVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~--~~~~~~~~p~vitVgA 347 (779)
+||+||+++++ +|||||||... ....+..++.++.++|++||+||||+|.. ...++...|++|+|||
T Consensus 118 ~ai~~a~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga 191 (310)
T 2ixt_A 118 AAIRHAADQATATGTKTIISMSLGSSA------NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAA 191 (310)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEE
T ss_pred HHHHHHHHhhhccCCCeEEEEcCCCCC------CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEe
Confidence 99999999988 99999999872 24567778888999999999999999976 3456778899999998
Q ss_pred CccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHH
Q 004010 348 GTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGL 427 (779)
Q Consensus 348 st~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 427 (779)
.+...
T Consensus 192 ~~~~~--------------------------------------------------------------------------- 196 (310)
T 2ixt_A 192 LENVQ--------------------------------------------------------------------------- 196 (310)
T ss_dssp EEEEE---------------------------------------------------------------------------
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 43100
Q ss_pred HHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCC--ccccccCCC
Q 004010 428 VVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAP--VVASFSARG 505 (779)
Q Consensus 428 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~--~~a~fSs~G 505 (779)
..+ .++.||++|
T Consensus 197 ------------------------------------------------------------------~~g~~~~~~~S~~G 210 (310)
T 2ixt_A 197 ------------------------------------------------------------------QNGTYRVADYSSRG 210 (310)
T ss_dssp ------------------------------------------------------------------ETTEEEECTTSCCC
T ss_pred ------------------------------------------------------------------cCCCeeeccccCCC
Confidence 001 568899999
Q ss_pred CCCCC----CCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 004010 506 PNGLN----PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRS 581 (779)
Q Consensus 506 p~~~~----~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~ 581 (779)
|.... ..+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||+
T Consensus 211 ~~~~~g~~~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~ 277 (310)
T 2ixt_A 211 YISTAGDYVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRS 277 (310)
T ss_dssp CTTTTTSSSCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred CccCCccccccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 95321 1235999999999999998765 799999999999999999999999999999999999
Q ss_pred HHHhccccccCCCCCCCccCCCCCCCCCccCCCcccc
Q 004010 582 AMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNL 618 (779)
Q Consensus 582 ~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~ 618 (779)
+|++||++++..+. ....++.++.||||++|+
T Consensus 278 ~L~~tA~~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 278 NLQERAKSVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HHHHHHHTSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred HHHhhCcccCCCCC-----cccccCCccccccceeec
Confidence 99999998754321 123456778999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.1e-49 Score=428.09 Aligned_cols=270 Identities=30% Similarity=0.411 Sum_probs=218.7
Q ss_pred cCCccc--cCCccCCCCCC--CcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccc
Q 004010 117 LGLRNQ--QGLWSESDYGS--DVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGH 192 (779)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~--gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~ 192 (779)
|++..+ ..+|+.+ +|+ ||+|+|||||||++||+|.++ +...++|..+.
T Consensus 10 W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~ 61 (320)
T 2z30_A 10 WGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGK 61 (320)
T ss_dssp HHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGC
T ss_pred CChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCCc
Confidence 444433 4689988 899 999999999999999999742 33333343321
Q ss_pred cccCCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHH
Q 004010 193 EAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSD 272 (779)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~ 272 (779)
.. .+.....|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++..+.+..++
T Consensus 62 ~~---------------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~ 117 (320)
T 2z30_A 62 VS---------------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSD 117 (320)
T ss_dssp CB---------------CCHHHHBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHH
T ss_pred cC---------------CCCCCCCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHH
Confidence 00 001123578999999999999962 21 12 37999999999999998772377889
Q ss_pred HHHHHHHhhhC--------------------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCC
Q 004010 273 ILAAFDAAVND--------------------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG 332 (779)
Q Consensus 273 i~~ai~~A~~~--------------------gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~ 332 (779)
+++||+||+++ +++|||||||... ....+..++.++.++|++||+||||+|...
T Consensus 118 i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~ 191 (320)
T 2z30_A 118 IAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA------DDSYLYDMIIQAYNAGIVIVAASGNEGAPS 191 (320)
T ss_dssp HHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCSSCCSS
T ss_pred HHHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCC------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCC
Confidence 99999999987 9999999999872 245677778889999999999999999887
Q ss_pred CccccCCCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccE
Q 004010 333 MSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKI 412 (779)
Q Consensus 333 ~~~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gki 412 (779)
..++...|++|+|||.+.
T Consensus 192 ~~~Pa~~~~vi~Vga~~~-------------------------------------------------------------- 209 (320)
T 2z30_A 192 PSYPAAYPEVIAVGAIDS-------------------------------------------------------------- 209 (320)
T ss_dssp CCBTTTSTTEEEEEEECT--------------------------------------------------------------
T ss_pred CCCcccCCCeEEEEeeCC--------------------------------------------------------------
Confidence 788888999999998321
Q ss_pred EEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecc
Q 004010 413 VICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGI 492 (779)
Q Consensus 413 vl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~ 492 (779)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhC-
Q 004010 493 KPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAH- 571 (779)
Q Consensus 493 ~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~- 571 (779)
.+.++.||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 210 --~~~~~~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~ 264 (320)
T 2z30_A 210 --NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYY 264 (320)
T ss_dssp --TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcCcccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhch
Confidence 126789999997 7899999999998765 89999999999999999999999999
Q ss_pred ------------CCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCC
Q 004010 572 ------------PDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 572 ------------P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
|+|++.+||++|++||+++.. +..+..||+|+||+.+|++
T Consensus 265 ~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 265 QKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHH
T ss_pred hhcccccccccCCCCCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHH
Confidence 999999999999999998632 2234589999999999986
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1e-49 Score=428.69 Aligned_cols=272 Identities=26% Similarity=0.334 Sum_probs=216.7
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
+++|+....++||+|||||||||++||+|.++ .+.+..+|..+
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~----------- 53 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG----------- 53 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC-----------
Confidence 35899988779999999999999999999753 12222222221
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCC-CCCHHHHHHHHHHhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-GCFDSDILAAFDAAV 281 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~-g~~~s~i~~ai~~A~ 281 (779)
+.....|.+||||||||||+|+.++ .+.||||+|+|+.+|++.+.. .+...++++||+||+
T Consensus 54 --------~~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~ 115 (306)
T 4h6w_A 54 --------EANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAV 115 (306)
T ss_dssp -------------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhh
Confidence 0122346789999999999997432 247999999999999987652 367788999999999
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcceeeEEEeC
Q 004010 282 NDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLG 361 (779)
Q Consensus 282 ~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~l~ 361 (779)
+++++|||+|||... ........+..++.++.++|++||+||||+|.....++...+++|+|||.+.
T Consensus 116 ~~g~~vi~~s~g~~~--~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~----------- 182 (306)
T 4h6w_A 116 NNGANIINVSAGQLT--DAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD----------- 182 (306)
T ss_dssp HTTCSEEEECCCEEE--SSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-----------
T ss_pred cccceeeeccccccc--cCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-----------
Confidence 999999999999752 2233455677888899999999999999999887778888899999988321
Q ss_pred CCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEec
Q 004010 362 DGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILAN 441 (779)
Q Consensus 362 ~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n 441 (779)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeC
Q 004010 442 GISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAP 521 (779)
Q Consensus 442 ~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 521 (779)
.+.+++||++|+. ..||||+||
T Consensus 183 -----------------------------------------------------~~~~~~~s~~g~~-----~~~~di~AP 204 (306)
T 4h6w_A 183 -----------------------------------------------------QGKPVDFSNWGDA-----YQKQGILAP 204 (306)
T ss_dssp -----------------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEE
T ss_pred -----------------------------------------------------CCCccccccccCC-----cCcceeecC
Confidence 1256789999974 468999999
Q ss_pred CCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHhccccccCCCCCC
Q 004010 522 GVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA----HPDWSPAAIRSAMMTTASIVDNSNQPM 597 (779)
Q Consensus 522 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~Ik~~L~~TA~~~~~~~~~~ 597 (779)
|++|+++++.+ .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 205 G~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~--- 268 (306)
T 4h6w_A 205 GKDILGAKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD--- 268 (306)
T ss_dssp CSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---
T ss_pred CcCcccccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---
Confidence 99999998875 7999999999999999999999864 699999999999999999875322
Q ss_pred CccCCCCCCCCCccCCCcccccccCC
Q 004010 598 TDEATGNASTPYDFGAGHVNLDRAMD 623 (779)
Q Consensus 598 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 623 (779)
......||+|+||+.+|++
T Consensus 269 -------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 -------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp -------CSCGGGGTTCBCCHHHHHH
T ss_pred -------CCCCCCcceeecCHHHHHH
Confidence 1223479999999999986
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=6.7e-49 Score=429.45 Aligned_cols=270 Identities=22% Similarity=0.164 Sum_probs=215.4
Q ss_pred cCCccCCCCCC--CcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCC
Q 004010 123 QGLWSESDYGS--DVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAG 200 (779)
Q Consensus 123 ~~~~~~~~~G~--gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~ 200 (779)
..+|+. .+|+ ||+||||||||| +||+|.++ ++..++|... +.
T Consensus 33 ~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~-----~~-- 76 (347)
T 2iy9_A 33 TETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQD-----GS-- 76 (347)
T ss_dssp CHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTT-----CC--
T ss_pred HHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCC-----CC--
Confidence 458988 8899 999999999999 99999642 3334444431 00
Q ss_pred CCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHh
Q 004010 201 PIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAA 280 (779)
Q Consensus 201 ~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A 280 (779)
+.+...+.|..||||||||||+|+ .| +.||||+|+|+.+|++++. +.. ++++||+||
T Consensus 77 --------~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~-~~~--~~~~ai~~a 133 (347)
T 2iy9_A 77 --------PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDG-VQD--SWIRAIESI 133 (347)
T ss_dssp --------SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSB-CTT--HHHHHHHHH
T ss_pred --------CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCC-CHH--HHHHHHHHH
Confidence 011124567899999999999997 12 3799999999999999876 433 999999999
Q ss_pred hhC------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCC-------CCccccCCC-------
Q 004010 281 VND------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN-------GMSVTNLAP------- 340 (779)
Q Consensus 281 ~~~------gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~~p------- 340 (779)
+++ |++|||||||.. ......+.+..++.++.++|++||+||||+|.. ...+++..|
T Consensus 134 ~~~~~~~~~~~~Vin~S~G~~---~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~ 210 (347)
T 2iy9_A 134 MSNVFLAPGEEKIINISGGQK---GVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNK 210 (347)
T ss_dssp HTCTTSCTTEEEEEEESSCBC---CC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHH
T ss_pred HhhhhcccCCceEEEeccccC---CCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCcccccccc
Confidence 999 999999999976 233345678888889999999999999999975 345667777
Q ss_pred ---ceEEeccCcc--CcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEE
Q 004010 341 ---WIVTVGAGTI--DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVIC 415 (779)
Q Consensus 341 ---~vitVgAst~--d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~ 415 (779)
++|+|||.+. +....
T Consensus 211 ~~~~vi~Vga~~~~~~g~~~------------------------------------------------------------ 230 (347)
T 2iy9_A 211 KQDPVIRVAALAQYRKGETP------------------------------------------------------------ 230 (347)
T ss_dssp HTCCEEEEEEECCCCTTSCC------------------------------------------------------------
T ss_pred ccCCEEEEEEcccCCCCcee------------------------------------------------------------
Confidence 9999998533 11000
Q ss_pred cCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCC
Q 004010 416 DRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPA 495 (779)
Q Consensus 416 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~ 495 (779)
...
T Consensus 231 -----------------------------------------------------------------------------~~~ 233 (347)
T 2iy9_A 231 -----------------------------------------------------------------------------VLH 233 (347)
T ss_dssp -----------------------------------------------------------------------------CBC
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 001
Q ss_pred CccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCC
Q 004010 496 PVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWS 575 (779)
Q Consensus 496 ~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s 575 (779)
+..+.||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+
T Consensus 234 ~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt 293 (347)
T 2iy9_A 234 GGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRAT 293 (347)
T ss_dssp CCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred CCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCC
Confidence 245799999995 679999999999999865 799999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCC
Q 004010 576 PAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 624 (779)
Q Consensus 576 p~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 624 (779)
+++||++|++||+++...+ ...||+|+||+.+|++.
T Consensus 294 ~~~v~~~L~~tA~~~~~~~-------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 294 ATELKRTLLESADKYPSLV-------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHHHHHHSEECGGGT-------------TTSGGGEECCHHHHHHH
T ss_pred HHHHHHHHHHhCccCCCCC-------------CccccCCEecHHHHHHH
Confidence 9999999999999875321 24899999999999973
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=6.8e-48 Score=420.57 Aligned_cols=302 Identities=26% Similarity=0.334 Sum_probs=220.9
Q ss_pred ccCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCC
Q 004010 122 QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGP 201 (779)
Q Consensus 122 ~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~ 201 (779)
+..+|+.+++|+||+||||||||+ +||+|.++-.. +.............+.+... .+.. +++..
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~-------~~~~~~~~~~~~d~~~~~~~--~~~~------~~~~~ 84 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP-------GYDFISNSQISLDGDGRDAD--PFDE------GDWFD 84 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC-------CEECCCCHHHHCSSSSSBSC--CBCC------CCCBC
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc-------CccccCCccccccCCCccCC--cccc------ccccc
Confidence 346899999999999999999998 99999753111 11000000000000000000 0000 00000
Q ss_pred CCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhh
Q 004010 202 IGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAV 281 (779)
Q Consensus 202 ~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~ 281 (779)
.+.....+.+.....|..||||||||||+|...+..+ +.||||+|+|+.+|+++.. +++.++++++|+||+
T Consensus 85 ~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~-~~~~~~~~~ai~~a~ 155 (340)
T 3lpc_A 85 NWACGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRC-GGYDSDISDGLYWAA 155 (340)
T ss_dssp TTTTSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTT-BCCHHHHHHHHHHHH
T ss_pred cccccCCCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCC-CCcHHHHHHHHHHHh
Confidence 0000011223345678999999999999998654432 3799999999999999888 688999999999999
Q ss_pred h----------CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC-ccccCCCceEEeccCcc
Q 004010 282 N----------DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTI 350 (779)
Q Consensus 282 ~----------~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~ 350 (779)
+ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||.+.
T Consensus 156 ~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~ 230 (340)
T 3lpc_A 156 GGRIAGIPENRNPAKVINMSLGSDG-----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS 230 (340)
T ss_dssp TCCCTTSCCCSSCCSEEEECCCEES-----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT
T ss_pred cccccccccccCCCeEEEeCcCCCC-----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC
Confidence 8 89999999999762 22455777778889999999999999997654 45677889999998321
Q ss_pred CcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHH
Q 004010 351 DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVK 430 (779)
Q Consensus 351 d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 430 (779)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCC
Q 004010 431 KAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLN 510 (779)
Q Consensus 431 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~ 510 (779)
.+.++.||++||
T Consensus 231 ----------------------------------------------------------------~~~~~~~S~~g~---- 242 (340)
T 3lpc_A 231 ----------------------------------------------------------------RGIRASFSNYGV---- 242 (340)
T ss_dssp ----------------------------------------------------------------TSSBCTTCCBST----
T ss_pred ----------------------------------------------------------------CCCcCCCCCCCC----
Confidence 126789999998
Q ss_pred CCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhh-C---CCCCHHHHHHHHHhc
Q 004010 511 PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA-H---PDWSPAAIRSAMMTT 586 (779)
Q Consensus 511 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~~sp~~Ik~~L~~T 586 (779)
||||+|||++|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++|++|
T Consensus 243 ----~~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~t 312 (340)
T 3lpc_A 243 ----DVDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVST 312 (340)
T ss_dssp ----TCCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred ----CceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhc
Confidence 469999999999998865321 12236999999999999999999999998 5 999999999999999
Q ss_pred cccccCCCCCCCccCCCCCCCCCccCCCcccccccCCC
Q 004010 587 ASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 624 (779)
Q Consensus 587 A~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 624 (779)
|+++.. .....||+|+||+.+|++.
T Consensus 313 A~~~~~-------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 313 TSPFNG-------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp CBCCSS-------------CCSSCCCSSBCCHHHHHHH
T ss_pred CCcCCC-------------CCCCCcccceecHHHHHHH
Confidence 998631 2345899999999999874
No 23
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.8e-47 Score=460.35 Aligned_cols=358 Identities=23% Similarity=0.244 Sum_probs=242.0
Q ss_pred CCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCC--CCHHHHHHHHHHhhh-----CCCcEE
Q 004010 216 RDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAG--CFDSDILAAFDAAVN-----DGVDVI 288 (779)
Q Consensus 216 ~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~s~i~~ai~~A~~-----~gvdVI 288 (779)
.|++||||||||||||.. ++. .+.||||+|+|+.+|+++...+ +..++++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~--------g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSR--------DVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSS--------SSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCC--------CceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999986 322 2379999999999999987522 356778888888887 799999
Q ss_pred EeccCCCCCCCCCCCCCHHHHHHHHHh-cCCcEEEEccCCCCCCCCc--ccc--CCCceEEeccCccCcceeeEEEeCCC
Q 004010 289 SISIGGGDGISSPYYLDPIAIGSYGAA-SRGVFVSSSAGNDGPNGMS--VTN--LAPWIVTVGAGTIDRNFPAEVRLGDG 363 (779)
Q Consensus 289 n~SlG~~~g~~~~~~~d~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~--~~~--~~p~vitVgAst~d~~~~~~~~l~~g 363 (779)
|||||.. ......+.+..++.++. ++|++||+||||+|+...+ .++ ..+++|+|||.+.+.........
T Consensus 338 NmS~G~~---~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~--- 411 (1354)
T 3lxu_X 338 NMSYGEH---ANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM--- 411 (1354)
T ss_dssp EECCCCC---CSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-------
T ss_pred EcCCccC---CCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc---
Confidence 9999997 33233567777777775 8999999999999986544 344 48999999996543221100000
Q ss_pred eEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccC
Q 004010 364 RRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGI 443 (779)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 443 (779)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEeCCC
Q 004010 444 SNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGV 523 (779)
Q Consensus 444 ~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 523 (779)
.....+.++.|||+||+.+ +.+||||+|||+
T Consensus 412 -----------------------------------------------~~~~~g~~asFSS~GPt~d--g~~KpDIaAPG~ 442 (1354)
T 3lxu_X 412 -----------------------------------------------REKLPGNVYTWTSRDPCID--GGQGVTVCAPGG 442 (1354)
T ss_dssp -----------------------------------------------------CCCCCCCCSCCSS--SSCCEEEEEEC-
T ss_pred -----------------------------------------------ccCCCCccccccCCCCCcc--CCCcceEEecCc
Confidence 0001237899999999975 899999999999
Q ss_pred cEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCCCCCCc
Q 004010 524 NILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKS----AHPDWSPAAIRSAMMTTASIVDNSNQPMTD 599 (779)
Q Consensus 524 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~ 599 (779)
+|+++...... .|..++|||||||||||++|||++ ++|+|+|++||++|++||+++..
T Consensus 443 ~I~St~~~~~~-----------~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------- 504 (1354)
T 3lxu_X 443 AIASVPQFTMS-----------KSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------- 504 (1354)
T ss_dssp -------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-------
T ss_pred eEEEeecCCCC-----------ceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-------
Confidence 99998653322 789999999999999999999986 89999999999999999998642
Q ss_pred cCCCCCCCCCccCCCcccccccCCCCceecCCchhhhhhhhcCCCCcc-ceEEEecccccCCCCCCCCCCCCccchhhhc
Q 004010 600 EATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYGPK-LIQVITRIPARCPAKRPRPENLNYPSIAALF 678 (779)
Q Consensus 600 ~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~-~~~~~~~~~~~c~~~~~~~~~lN~ps~~~~~ 678 (779)
.+++.||+|+||+.+|++..+.|+..+.+|+.|+|..++... .| ..+.. .| +..
T Consensus 505 ------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgI--ylR~~-~~------------~~~---- 559 (1354)
T 3lxu_X 505 ------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGI--HLRQG-VQ------------RNS---- 559 (1354)
T ss_dssp ------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSE--EECSS-CC------------CSC----
T ss_pred ------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCce--EEecc-cc------------CCc----
Confidence 244689999999999999999999999999999999886322 22 11100 00 000
Q ss_pred ccCCCCceeEEEEEEEEecC---CC-CeE--EEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecccccccCCCc
Q 004010 679 STQSRGVSSKSFIRTVTNVG---QP-NAV--YTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSG 752 (779)
Q Consensus 679 ~~~~~~~~~~t~~rtvtNvg---~~-~~t--y~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~~ 752 (779)
.. .+.+++-+..|.. .. ... -++.+... . --|. -|+.|.+ .++.++|.|+++... . ....
T Consensus 560 ---~~--~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t-~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~---L-~~G~ 625 (1354)
T 3lxu_X 560 ---ID--YNVYIEPIFYNDKEADPKDKFNFNVRLNLIAS-Q-PWVQ-CGAFLDL--SYGTRSIAVRVDPTG---L-QPGV 625 (1354)
T ss_dssp ---EE--EEEEEEEEESSCSCSSSTTCSCCCCEEEEEES-S-TTEE-ECSCEEC--TTSCEEEEEEECGGG---C-CSEE
T ss_pred ---eE--EEEEEeeeecCcccCChhhccceEEEEEEecC-C-Ccee-cccceee--cCCCceEEEEECCCC---C-CCcc
Confidence 00 2222333332211 11 111 22222221 1 1222 3777776 677888999998764 2 2234
Q ss_pred ceEEEEEEEC-----CceEEEeEEEEEe
Q 004010 753 AAFGSISWSD-----GKHEVRSPLVVTQ 775 (779)
Q Consensus 753 ~~~G~~~~~~-----~~~~v~~P~~v~~ 775 (779)
.|++|..-| .+...|+||.|.-
T Consensus 626 -h~~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 626 -HSAVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp -EEEEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred -eeEEEEEEEcCCcccCceEEeeEEEEe
Confidence 789987654 4678999998754
No 24
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.9e-47 Score=430.20 Aligned_cols=291 Identities=28% Similarity=0.376 Sum_probs=221.8
Q ss_pred cCCcc-CCCCCCCcEEEEEecCCCC------CCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeecccccccc
Q 004010 123 QGLWS-ESDYGSDVIIGVFDTGIWP------ERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAA 195 (779)
Q Consensus 123 ~~~~~-~~~~G~gv~VgVIDtGid~------~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~ 195 (779)
+.+|+ .+++|+||+|||||||||+ .||+|.+ +++..++|...
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC----
Confidence 35787 7899999999999999999 7999863 23433444321
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCC---CHHH
Q 004010 196 GGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGC---FDSD 272 (779)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~---~~s~ 272 (779)
..+.|..||||||||||+|+... +.||||+|+|+.+|+++.. +. ..++
T Consensus 60 -----------------~~~~d~~gHGT~VAgiiag~g~~-----------~~GvAp~a~l~~~~v~~~~-g~~~~~~~~ 110 (434)
T 1wmd_A 60 -----------------NNANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSG-GGLGGLPSN 110 (434)
T ss_dssp -----------------TCCCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTT-SSCTTSCSS
T ss_pred -----------------CCCCCCCCcHHHHHHHHHcCCCC-----------ceeeCCCCEEEEEEeecCC-CccccccHH
Confidence 24567899999999999986321 3799999999999999876 43 4568
Q ss_pred HHHHHHHhhhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHH-hcCCcEEEEccCCCCCCC--CccccCCCceEEeccCc
Q 004010 273 ILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGA-ASRGVFVSSSAGNDGPNG--MSVTNLAPWIVTVGAGT 349 (779)
Q Consensus 273 i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a-~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVgAst 349 (779)
+.++|++|+++|++|||||||.. .... .+....++.++ .++|++||+||||+|... ...+..++++|+|||.+
T Consensus 111 ~~~ai~~a~~~g~~Vin~S~G~~---~~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~ 186 (434)
T 1wmd_A 111 LQTLFSQAYSAGARIHTNSWGAA---VNGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATE 186 (434)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBC---CTTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEEC
T ss_pred HHHHHHHHHhcCCeEEEecCCCC---cCCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEeccc
Confidence 99999999999999999999987 2222 23455555555 589999999999999764 34567889999999964
Q ss_pred cCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHH
Q 004010 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVV 429 (779)
Q Consensus 350 ~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 429 (779)
..+... |
T Consensus 187 ~~~~~~------------------------------------------------------~------------------- 193 (434)
T 1wmd_A 187 NLRPSF------------------------------------------------------G------------------- 193 (434)
T ss_dssp CSCGGG------------------------------------------------------C-------------------
T ss_pred ccCccc------------------------------------------------------C-------------------
Confidence 322100 0
Q ss_pred HHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCC
Q 004010 430 KKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGL 509 (779)
Q Consensus 430 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~ 509 (779)
......+.++.||++||+.+
T Consensus 194 ------------------------------------------------------------~~~~~~~~~a~fS~~G~~~~ 213 (434)
T 1wmd_A 194 ------------------------------------------------------------SYADNINHVAQFSSRGPTKD 213 (434)
T ss_dssp ------------------------------------------------------------GGGSCTTSBCTTSCCCCCTT
T ss_pred ------------------------------------------------------------cccCCCCccccccCCCCCCC
Confidence 00012347899999999975
Q ss_pred CCCCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCC-----CHHHHHHHHH
Q 004010 510 NPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDW-----SPAAIRSAMM 584 (779)
Q Consensus 510 ~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~-----sp~~Ik~~L~ 584 (779)
+++||||+|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|+
T Consensus 214 --g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~ 290 (434)
T 1wmd_A 214 --GRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALI 290 (434)
T ss_dssp --SCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred --CCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 899999999999999998643210000 00012379999999999999999999999999876 8999999999
Q ss_pred hccccccCCCCCCCccCCCCCCCCCccCCCcccccccCCCC
Q 004010 585 TTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPG 625 (779)
Q Consensus 585 ~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~g 625 (779)
+||+++. ....+..||||+||+.+|++..
T Consensus 291 ~tA~~~~------------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 291 AGAADIG------------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp HHCBCCS------------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred cCCcccC------------CCCCCccCCcCeEeHHHhcccc
Confidence 9998752 1245679999999999999754
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=4.6e-47 Score=401.96 Aligned_cols=236 Identities=30% Similarity=0.409 Sum_probs=199.8
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|..+.+|+||+|+|||||||++||+|.++ ++..++|...
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~----------- 60 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDN----------- 60 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTT-----------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCC-----------
Confidence 35899999999999999999999999999742 3333444331
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (779)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.+.+..+++++||+|+++
T Consensus 61 ---------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~ 117 (284)
T 1sh7_A 61 ---------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQ 117 (284)
T ss_dssp ---------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHh
Confidence 1245688999999999999863 59999999999999987734788899999999997
Q ss_pred C--CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC-ccccCCCceEEeccCccCcceeeEEE
Q 004010 283 D--GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVR 359 (779)
Q Consensus 283 ~--gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~~~ 359 (779)
+ +++|||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+|||.+.
T Consensus 118 ~~~~~~Vin~S~G~~-------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (284)
T 1sh7_A 118 NASGPSVANMSLGGG-------QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS--------- 181 (284)
T ss_dssp HCCSSEEEEECCCBS-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT---------
T ss_pred CCCCCcEEEeCCCCC-------CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC---------
Confidence 4 799999999987 2467788888899999999999999997643 45677899999998321
Q ss_pred eCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEE
Q 004010 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (779)
Q Consensus 360 l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~ 439 (779)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEE
Q 004010 440 ANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLI 519 (779)
Q Consensus 440 ~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 519 (779)
.+.++.||++||.+ ||+
T Consensus 182 -------------------------------------------------------~~~~~~~S~~G~~~--------di~ 198 (284)
T 1sh7_A 182 -------------------------------------------------------SDSRSSFSNWGSCV--------DLF 198 (284)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCcCcccCCCCcc--------EEE
Confidence 12678999999964 999
Q ss_pred eCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004010 520 APGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 591 (779)
Q Consensus 520 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 591 (779)
|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 199 ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 199 APGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp EECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 9999999998765 7999999999999999999999999999999999999999998763
No 26
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.2e-46 Score=398.22 Aligned_cols=236 Identities=32% Similarity=0.402 Sum_probs=200.6
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|..+.+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------ 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------ 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC------------
Confidence 45799999999999999999999999999642 233333332
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (779)
..+.|..||||||||||+|.. .||||+|+|+.+|++++...+..++++++|+|+++
T Consensus 62 ----------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~ 117 (276)
T 4dzt_A 62 ----------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTR 117 (276)
T ss_dssp ----------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHh
Confidence 234578899999999999873 59999999999999988734788999999999998
Q ss_pred C--CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCc-cccCCCceEEeccCccCcceeeEEE
Q 004010 283 D--GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMS-VTNLAPWIVTVGAGTIDRNFPAEVR 359 (779)
Q Consensus 283 ~--gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgAst~d~~~~~~~~ 359 (779)
. +++|||||||.. ....+..++.++.++|++||+||||+|..... .+...|++|+|||.+.
T Consensus 118 ~~~~~~vin~S~g~~-------~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (276)
T 4dzt_A 118 NHRRPAVANMSLGGG-------VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS--------- 181 (276)
T ss_dssp HCCSSEEEEECCCEE-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------
T ss_pred cCCCCeEEEECCCCC-------CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC---------
Confidence 7 999999999986 24677888889999999999999999976543 3677889999988321
Q ss_pred eCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEE
Q 004010 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (779)
Q Consensus 360 l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~ 439 (779)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEE
Q 004010 440 ANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLI 519 (779)
Q Consensus 440 ~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 519 (779)
.+.++.||++||.. ||+
T Consensus 182 -------------------------------------------------------~~~~~~~S~~g~~~--------dv~ 198 (276)
T 4dzt_A 182 -------------------------------------------------------SDARASFSNYGSCV--------DLF 198 (276)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCcCCcCCCCCCc--------eEE
Confidence 12678999999975 999
Q ss_pred eCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004010 520 APGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 591 (779)
Q Consensus 520 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 591 (779)
|||++|++++..... .|..++|||||||||||++|||+|++|+++++|||++|++||++..
T Consensus 199 ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 199 APGASIPSAWYTSDT-----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp EECSSEEEECTTSSS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eCCCCeEccccCCCC-----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999999876533 7999999999999999999999999999999999999999999864
No 27
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=9.7e-47 Score=398.48 Aligned_cols=240 Identities=34% Similarity=0.430 Sum_probs=200.5
Q ss_pred ccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCCCCC
Q 004010 126 WSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGG 205 (779)
Q Consensus 126 ~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~ 205 (779)
|+. .+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 25 ~~~-~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~--------------- 61 (279)
T 2pwa_A 25 YDE-SAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY--------------- 61 (279)
T ss_dssp CCT-TTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS---------------
T ss_pred ccC-CCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC---------------
Confidence 443 6899999999999999999999742 233333331
Q ss_pred CCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhhCCC
Q 004010 206 INETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVNDGV 285 (779)
Q Consensus 206 ~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~~gv 285 (779)
.+.|..||||||||||+|+. .||||+|+|+.+|++++.+.++.+++++||+||+++++
T Consensus 62 --------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 119 (279)
T 2pwa_A 62 --------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKN 119 (279)
T ss_dssp --------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGG
T ss_pred --------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCc
Confidence 24578999999999999862 69999999999999988733788999999999999887
Q ss_pred -------cEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC-ccccCCCceEEeccCccCcceeeE
Q 004010 286 -------DVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAE 357 (779)
Q Consensus 286 -------dVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~ 357 (779)
+|||||||.. ..+.+..++.++.++|++||+||||+|.... ..+...|++|+|||.+.
T Consensus 120 ~~~~~~~~Vin~S~G~~-------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------- 185 (279)
T 2pwa_A 120 NRNCPKGVVASLSLGGG-------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------- 185 (279)
T ss_dssp GSCCTTEEEEEECCCEE-------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------
T ss_pred cccCCCccEEEecCCCC-------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC-------
Confidence 9999999976 2467788888899999999999999997653 35677899999998321
Q ss_pred EEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEE
Q 004010 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (779)
Q Consensus 358 ~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 437 (779)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCe
Q 004010 438 ILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPD 517 (779)
Q Consensus 438 i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 517 (779)
.+.++.||++||. ||
T Consensus 186 ---------------------------------------------------------~~~~~~~S~~G~~--------~d 200 (279)
T 2pwa_A 186 ---------------------------------------------------------YDRRSSFSNYGSV--------LD 200 (279)
T ss_dssp ---------------------------------------------------------TSBBCTTCCBSTT--------CC
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCc--------ce
Confidence 1267899999996 49
Q ss_pred EEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCC
Q 004010 518 LIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPM 597 (779)
Q Consensus 518 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~~~~ 597 (779)
|+|||++|+++++.+ .|..++|||||||||||++|||+|+ |+++|+|||++|++||++...
T Consensus 201 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~----- 261 (279)
T 2pwa_A 201 IFGPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL----- 261 (279)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-----
T ss_pred EEEecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-----
Confidence 999999999999875 7999999999999999999999999 999999999999999987521
Q ss_pred CccCCCCCCCCCccCCCccccc
Q 004010 598 TDEATGNASTPYDFGAGHVNLD 619 (779)
Q Consensus 598 ~~~~~~~~~~~~~~G~G~vn~~ 619 (779)
..+|+|..|+.
T Consensus 262 -----------~~~~~g~~n~l 272 (279)
T 2pwa_A 262 -----------SNIPFGTVNLL 272 (279)
T ss_dssp -----------BSCCTTSCCEE
T ss_pred -----------CCCCCCCccEe
Confidence 14677777763
No 28
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=7.2e-46 Score=392.27 Aligned_cols=236 Identities=31% Similarity=0.410 Sum_probs=198.5
Q ss_pred CCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCCC
Q 004010 124 GLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIG 203 (779)
Q Consensus 124 ~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~ 203 (779)
.+|..+++|+||+|+|||||||++||+|.++ +...++|...
T Consensus 22 ~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 22 NNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp SEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTT------------
T ss_pred hhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCC------------
Confidence 5799999999999999999999999999742 2333344331
Q ss_pred CCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh-
Q 004010 204 GGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN- 282 (779)
Q Consensus 204 ~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~- 282 (779)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.+.+..+++++||+|+++
T Consensus 63 --------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~ 120 (278)
T 2b6n_A 63 --------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNN 120 (278)
T ss_dssp --------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhC
Confidence 1245688999999999999862 59999999999999987734788999999999997
Q ss_pred -CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC-ccccCCCceEEeccCccCcceeeEEEe
Q 004010 283 -DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVRL 360 (779)
Q Consensus 283 -~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~~~l 360 (779)
.+++|||||||.. . ...+..++.++.++|++||+||||+|.... ..+...|++|+|||.+.
T Consensus 121 ~~g~~Vin~S~G~~---~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 183 (278)
T 2b6n_A 121 ASGPAVANMSLGGG---A----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------- 183 (278)
T ss_dssp CCSSEEEEECCCEE---C----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCCCeEEEECCCCC---c----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------
Confidence 5999999999987 2 456777888899999999999999997654 34677889999988321
Q ss_pred CCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEe
Q 004010 361 GDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILA 440 (779)
Q Consensus 361 ~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 440 (779)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCeEEe
Q 004010 441 NGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIA 520 (779)
Q Consensus 441 n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~A 520 (779)
.+.++.||++||. |||+|
T Consensus 184 ------------------------------------------------------~~~~~~~S~~G~~--------~di~A 201 (278)
T 2b6n_A 184 ------------------------------------------------------NDSRSSFSNYGTC--------LDIYA 201 (278)
T ss_dssp ------------------------------------------------------TSBBCTTCCBSTT--------CCEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCC--------CeEEe
Confidence 1267889999985 49999
Q ss_pred CCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 004010 521 PGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 590 (779)
Q Consensus 521 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~ 590 (779)
||++|++++..... .|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 202 pG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 202 PGSSITSSWYTSNS-----------ATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred CCCCeECcccCCCC-----------CEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 99999999875322 799999999999999999999999999999999999999999875
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=4.8e-46 Score=434.55 Aligned_cols=300 Identities=23% Similarity=0.225 Sum_probs=202.4
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|..+++|+||+|||||||||++||+|.++- +.+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~---------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC----------
Confidence 458999999999999999999999999997531 11223333311
Q ss_pred CCCCCCccccCCCCC-CCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCC-H-HHHHHHHHH
Q 004010 203 GGGINETVEFMSPRD-ADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF-D-SDILAAFDA 279 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D-~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~-~-s~i~~ai~~ 279 (779)
....|.| .+||||||||||||. .++.+ +.||||+|+|+.+|+++.. +.. . ..+++....
T Consensus 104 --------~d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~-~~~~~~~~~~~~~~~ 165 (600)
T 2oxa_A 104 --------DDPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDN-SQQLQKDWLYALGDS 165 (600)
T ss_dssp --------SCCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTT-CCCCHHHHHHHTTTS
T ss_pred --------CCCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCc-ccchHHHHHHHHhhh
Confidence 1123444 789999999999998 33322 3799999999999999877 433 2 344454445
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCC----HHHHHHHH---HhcCCcEEEEccCCCCCCCC-------------------
Q 004010 280 AVNDGVDVISISIGGGDGISSPYYLD----PIAIGSYG---AASRGVFVSSSAGNDGPNGM------------------- 333 (779)
Q Consensus 280 A~~~gvdVIn~SlG~~~g~~~~~~~d----~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~------------------- 333 (779)
+..++++|||||||... ......+ .+..++.. +.++|++||+||||+|....
T Consensus 166 a~~~~~~Vin~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~ 243 (600)
T 2oxa_A 166 NASRDNRVFNHSYRMSV--VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFEN 243 (600)
T ss_dssp HHHHTCSEEEECCCCCC--SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSB
T ss_pred hcccCCeEEEEeccCCC--CCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccc
Confidence 77889999999999873 1111222 22222222 45789999999999986421
Q ss_pred ---ccccCCCceEEeccCccCcceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccc
Q 004010 334 ---SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRG 410 (779)
Q Consensus 334 ---~~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~g 410 (779)
...+.++|+|+|||.
T Consensus 244 ~n~~~~~~s~~vItVgA~-------------------------------------------------------------- 261 (600)
T 2oxa_A 244 SNLDPSNSNFWNLVVSAL-------------------------------------------------------------- 261 (600)
T ss_dssp TTSSGGGGSSSEEEEEEE--------------------------------------------------------------
T ss_pred cccCCcccCceeEEEecc--------------------------------------------------------------
Confidence 111123334444441
Q ss_pred cEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceee
Q 004010 411 KIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTIL 490 (779)
Q Consensus 411 kivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~ 490 (779)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeec-------CCCC--CC------------CCCCCCccceeEe
Q 004010 491 GIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWT-------EAVG--PT------------GLDSDLRKTEFNI 549 (779)
Q Consensus 491 ~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~-------~~~~--~~------------~~~~~~~~~~y~~ 549 (779)
...+.++.||++||+. ||+|||++|.+..+ .... .. ....+.....|..
T Consensus 262 --~~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~ 331 (600)
T 2oxa_A 262 --NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGV 331 (600)
T ss_dssp --CTTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEE
T ss_pred --cCCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccc
Confidence 1234789999999986 99999999644322 1100 00 0001112235899
Q ss_pred ecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCCC-----------------cc--CCCCCCCCCc
Q 004010 550 LSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMT-----------------DE--ATGNASTPYD 610 (779)
Q Consensus 550 ~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~-----------------~~--~~~~~~~~~~ 610 (779)
++|||||||||||++|||+|++|+|+|++||++|++||++++..+.++. ++ ........+.
T Consensus 332 ~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~ 411 (600)
T 2oxa_A 332 MNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPT 411 (600)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTT
T ss_pred cccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcccccc
Confidence 9999999999999999999999999999999999999999865432211 00 0111223468
Q ss_pred cCCCcccccccCCCCceecC
Q 004010 611 FGAGHVNLDRAMDPGLVYDI 630 (779)
Q Consensus 611 ~G~G~vn~~~Al~~glv~d~ 630 (779)
||||+||+.+|++....|..
T Consensus 412 ~G~G~vda~~Av~~A~~~~~ 431 (600)
T 2oxa_A 412 YGFGLIDVNKALELAANHQP 431 (600)
T ss_dssp TBTCBCCHHHHHHHHTTCCC
T ss_pred CCCchhhHHHHHHHHHhccc
Confidence 99999999999985554443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.4e-45 Score=418.52 Aligned_cols=296 Identities=15% Similarity=0.121 Sum_probs=212.7
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|..+++|+||+|||||||||++||+|.++-. ....++|... +.+
T Consensus 28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~------~~~-- 74 (471)
T 1p8j_A 28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQ------DPD-- 74 (471)
T ss_dssp HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTT------BSC--
T ss_pred HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCC------CCC--
Confidence 4689999999999999999999999999975310 0011223221 000
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (779)
+.+...+.|.+||||||||||||...++.+ +.||||+|+|+.+|+++ +..+++++||+++++
T Consensus 75 ------p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~ 136 (471)
T 1p8j_A 75 ------PQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD----GEVTDAVEARSLGLN 136 (471)
T ss_dssp ------CCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSC
T ss_pred ------CCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC----CchhHHHHHHHhhhc
Confidence 111124568899999999999997644322 37999999999999985 346789999999999
Q ss_pred -CCCcEEEeccCCCCCC-CCCCCCCHHHHHHHHHhc-----CCcEEEEccCCCCCCCCc----cccCCCceEEeccCccC
Q 004010 283 -DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAAS-----RGVFVSSSAGNDGPNGMS----VTNLAPWIVTVGAGTID 351 (779)
Q Consensus 283 -~gvdVIn~SlG~~~g~-~~~~~~d~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgAst~d 351 (779)
++++|||||||..... ........+..++.++.+ +|++||+||||+|..... ....++++|+|||.+.
T Consensus 137 ~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~- 215 (471)
T 1p8j_A 137 PNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ- 215 (471)
T ss_dssp TTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT-
T ss_pred cCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC-
Confidence 9999999999986210 001112334445555543 699999999999976322 1234578999988321
Q ss_pred cceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHH
Q 004010 352 RNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKK 431 (779)
Q Consensus 352 ~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 431 (779)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCC
Q 004010 432 AGGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNP 511 (779)
Q Consensus 432 ~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~ 511 (779)
.+.++.||++||...
T Consensus 216 ---------------------------------------------------------------~g~~a~~S~~g~~~~-- 230 (471)
T 1p8j_A 216 ---------------------------------------------------------------FGNVPWYSEACSSTL-- 230 (471)
T ss_dssp ---------------------------------------------------------------TSCCCTTCCBCTTCC--
T ss_pred ---------------------------------------------------------------CCCcccccCCCCcce--
Confidence 126789999999874
Q ss_pred CCCCCeEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004010 512 EILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 591 (779)
Q Consensus 512 ~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 591 (779)
...+|...+||.+|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 231 ~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~ 298 (471)
T 1p8j_A 231 ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAH 298 (471)
T ss_dssp EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTT
T ss_pred EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCC
Confidence 233444444567999987643 16999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCccCCCCCCCCCccCCCcccccccCCCCcee
Q 004010 592 NSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVY 628 (779)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~ 628 (779)
.....+.... ........||+|+||+.+|++....+
T Consensus 299 ~~~~~~~~n~-~g~~~~~~~G~G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 299 LNADDWATNG-VGRKVSHSYGYGLLDAGAMVALAQNW 334 (471)
T ss_dssp CCCSCCEECT-TSCEEBTTTBTCBCCHHHHHHHHHTC
T ss_pred CCCCCceecC-CCcccCCCCCCEEEcHhHHHHHhhcc
Confidence 4332221111 11123468999999999999854433
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=2.4e-45 Score=412.32 Aligned_cols=279 Identities=24% Similarity=0.257 Sum_probs=200.7
Q ss_pred CccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCCCC
Q 004010 125 LWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGG 204 (779)
Q Consensus 125 ~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 204 (779)
.|..+.+|+||+|+|||||||++||+|.++- ......+... .++
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~---~dg------- 61 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPE---EDG------- 61 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCC---CC--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccC---CCC-------
Confidence 6888999999999999999999999997530 1111111100 000
Q ss_pred CCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhhC-
Q 004010 205 GINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVND- 283 (779)
Q Consensus 205 ~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~~- 283 (779)
......+.|..||||||||||+|+. .||||+|+|+.+|++++.+.++.+++++||+|+++.
T Consensus 62 ----~~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~ 123 (546)
T 2qtw_B 62 ----TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQ 123 (546)
T ss_dssp ----------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHH
T ss_pred ----ccccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhh
Confidence 0001245688999999999999873 599999999999999887237788999999999974
Q ss_pred -----CCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCC-ccccCCCceEEeccCccCcceeeE
Q 004010 284 -----GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAE 357 (779)
Q Consensus 284 -----gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~ 357 (779)
+++|||||||+. +...+..++.++.++|++||+||||+|.... .++...|++|+|||.+.+...
T Consensus 124 ~~~~~g~~VINmSlGg~-------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~--- 193 (546)
T 2qtw_B 124 LVQPVGPLVVLLPLAGG-------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--- 193 (546)
T ss_dssp HHSCCSCEEEEECEEEE-------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB---
T ss_pred hhccCCCeEEEecCCCC-------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc---
Confidence 899999999976 2467788888999999999999999997653 446788999999985322100
Q ss_pred EEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceEE
Q 004010 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (779)
Q Consensus 358 ~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 437 (779)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCCe
Q 004010 438 ILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPD 517 (779)
Q Consensus 438 i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 517 (779)
...-..||++|+. ||
T Consensus 194 ---------------------------------------------------------a~~s~~fSn~G~~--------vD 208 (546)
T 2qtw_B 194 ---------------------------------------------------------VTLGTLGTNFGRC--------VD 208 (546)
T ss_dssp ---------------------------------------------------------CEETTEECCBSTT--------CC
T ss_pred ---------------------------------------------------------ccccCCcCCCCCc--------ce
Confidence 0001238999984 59
Q ss_pred EEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCCCC
Q 004010 518 LIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPM 597 (779)
Q Consensus 518 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~~~~~ 597 (779)
|+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|+|||++|++||.+..-.+..+
T Consensus 209 I~APG~~I~St~~~~~~-----------~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~ 277 (546)
T 2qtw_B 209 LFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWF 277 (546)
T ss_dssp EEEECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGS
T ss_pred EEecCccEEeeccCCCC-----------cEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccC
Confidence 99999999999876422 7999999999999999999999999999999999999999998643211100
Q ss_pred C--------ccCCCCCCCCCccCCCc--ccccccCC
Q 004010 598 T--------DEATGNASTPYDFGAGH--VNLDRAMD 623 (779)
Q Consensus 598 ~--------~~~~~~~~~~~~~G~G~--vn~~~Al~ 623 (779)
. +.-.......+.+|+|+ .++..+..
T Consensus 278 p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 278 PEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 0 00001122455678888 77776664
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=4.4e-45 Score=417.17 Aligned_cols=287 Identities=19% Similarity=0.207 Sum_probs=211.9
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|..+++|+||+|||||||||++||+|.++- + ..+.++|..+ .
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~------~---- 88 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDN------T---- 88 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTT------B----
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCC------C----
Confidence 458999999999999999999999999997531 0 0012233321 0
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (779)
.+.....|.+||||||||||||...++.+ +.||||+|+|+.+|+++.. ++.+++++||+||++
T Consensus 89 -------~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~~--~~~~~~~~ai~~a~~ 151 (503)
T 2id4_A 89 -------NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSGD--ITTEDEAASLIYGLD 151 (503)
T ss_dssp -------SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTSC--CCHHHHHHHTTTTTT
T ss_pred -------CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCCC--CChHHHHHHHHhHhh
Confidence 01112357889999999999997644322 3799999999999999753 678899999999999
Q ss_pred CCCcEEEeccCCCCCC-CCCCCCCHHHHHHHHHh-----cCCcEEEEccCCCCCCCC--ccc--cCCCceEEeccCccCc
Q 004010 283 DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAA-----SRGVFVSSSAGNDGPNGM--SVT--NLAPWIVTVGAGTIDR 352 (779)
Q Consensus 283 ~gvdVIn~SlG~~~g~-~~~~~~d~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~--~~~p~vitVgAst~d~ 352 (779)
++ +|||||||..... ........+..++.++. .+|++||+||||+|.... .++ ..++++|+|||.+.
T Consensus 152 ~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~-- 228 (503)
T 2id4_A 152 VN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH-- 228 (503)
T ss_dssp TC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT--
T ss_pred cC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC--
Confidence 98 9999999986210 01112234566666665 479999999999997542 222 24678899988321
Q ss_pred ceeeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHc
Q 004010 353 NFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKA 432 (779)
Q Consensus 353 ~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~ 432 (779)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCC
Q 004010 433 GGVGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPE 512 (779)
Q Consensus 433 Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~ 512 (779)
.+.++.||++||..
T Consensus 229 --------------------------------------------------------------~~~~a~~S~~g~~~---- 242 (503)
T 2id4_A 229 --------------------------------------------------------------KDLHPPYSEGCSAV---- 242 (503)
T ss_dssp --------------------------------------------------------------TSCCCTTCCCCTTE----
T ss_pred --------------------------------------------------------------CCCcCCcCCCCCcc----
Confidence 12568999999986
Q ss_pred CCCCeEEe----CCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 004010 513 ILKPDLIA----PGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTAS 588 (779)
Q Consensus 513 ~lKPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~ 588 (779)
|++| ||.+|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||+
T Consensus 243 ----~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 306 (503)
T 2id4_A 243 ----MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAV 306 (503)
T ss_dssp ----EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCB
T ss_pred ----eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccc
Confidence 8877 899999995432 17999999999999999999999999999999999999999999
Q ss_pred cccCC-CCCCCccCCCCCCCCCccCCCcccccccCCCCce
Q 004010 589 IVDNS-NQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLV 627 (779)
Q Consensus 589 ~~~~~-~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv 627 (779)
++... ...+.... ........||+|+||+.+|++...-
T Consensus 307 ~~~~~~~~~~~~~~-~g~~~~~~~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 307 GLEKNADGDWRDSA-MGKKYSHRYGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp CCTTCGGGCCEECS-SSSEEBTTTBTCBCCHHHHHHHHTS
T ss_pred cCCCCcCCCceecC-CCCccCcccCCcEecHHHHHHHHhc
Confidence 87543 11111111 1112345899999999999974443
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=8.9e-45 Score=384.60 Aligned_cols=229 Identities=32% Similarity=0.444 Sum_probs=194.0
Q ss_pred CccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCCCC
Q 004010 125 LWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGG 204 (779)
Q Consensus 125 ~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 204 (779)
.|+.. +|+||+|+|||||||++||+|.++ +...++|..
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~-------------- 62 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAS-------------- 62 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSS--------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCC--------------
Confidence 46665 899999999999999999999742 333333332
Q ss_pred CCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhhCC
Q 004010 205 GINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVNDG 284 (779)
Q Consensus 205 ~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~~g 284 (779)
...|.+||||||||||+|+. .||||+|+|+.+|+++..+.+..+++++||+|+++++
T Consensus 63 ---------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~ 119 (279)
T 3f7m_A 63 ---------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDR 119 (279)
T ss_dssp ---------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHG
T ss_pred ---------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhcc
Confidence 12278899999999999862 6999999999999998873478899999999999886
Q ss_pred -------CcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEccCCCCCCCCc-cccCCCceEEeccCccCcceee
Q 004010 285 -------VDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMS-VTNLAPWIVTVGAGTIDRNFPA 356 (779)
Q Consensus 285 -------vdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgAst~d~~~~~ 356 (779)
++|||||||.. ..+.+..++.++.++|++||+||||+|..... .+...|++|+|||.+.
T Consensus 120 ~~~~~~~~~Vin~S~g~~-------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 186 (279)
T 3f7m_A 120 QSRNCPRRTVASMSLGGG-------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------ 186 (279)
T ss_dssp GGSCCTTEEEEEECCCEE-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------
T ss_pred ccccCCCCeEEEeCCCcC-------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------
Confidence 89999999976 35678888889999999999999999976543 3677889999998321
Q ss_pred EEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCceE
Q 004010 357 EVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVG 436 (779)
Q Consensus 357 ~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g 436 (779)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCCCC
Q 004010 437 MILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKP 516 (779)
Q Consensus 437 ~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKP 516 (779)
.+.++.||++||..
T Consensus 187 ----------------------------------------------------------~~~~~~~S~~g~~~-------- 200 (279)
T 3f7m_A 187 ----------------------------------------------------------NDVRSTFSNYGRVV-------- 200 (279)
T ss_dssp ----------------------------------------------------------TSBBCTTCCBSTTC--------
T ss_pred ----------------------------------------------------------CCCCCCCCCCCCCC--------
Confidence 12678999999964
Q ss_pred eEEeCCCcEEeeecCCCCCCCCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 004010 517 DLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 591 (779)
Q Consensus 517 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 591 (779)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+ +|++||++|++||++..
T Consensus 201 di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 201 DIFAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp CEEEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred eEEECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 9999999999998865 7999999999999999999999999999 99999999999998753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.9e-42 Score=405.58 Aligned_cols=319 Identities=23% Similarity=0.224 Sum_probs=199.8
Q ss_pred cCCccCCCCCCCcEEEEEecCCCCCCCCcccCCCCCCCCcceeeeecccccCCccCCceeeeeeeccccccccCCCCCCC
Q 004010 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (779)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (779)
..+|..+++|+||+|||||||||++||+|.++- ..+.++|..+.
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~---------- 103 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSS----------
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCC----------
Confidence 458999999999999999999999999997530 11222232211
Q ss_pred CCCCCCccccCCCCCCCCccchhhhhhcccccCCCccccccccceeeeCCCCeEEEEEeecCCCCCCHHHHHHHH-HHhh
Q 004010 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAF-DAAV 281 (779)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai-~~A~ 281 (779)
.+.....|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++...+..++++.|+ +++.
T Consensus 104 -------~dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~ 167 (600)
T 3hjr_A 104 -------DDPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNA 167 (600)
T ss_dssp -------SCCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHH
T ss_pred -------CCCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhh
Confidence 111223457899999999999863 22 12 3799999999999999887447778887766 6778
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCHH-----HHHHHH--HhcCCcEEEEccCCCCCCCCccccCCCceEEeccCccCcce
Q 004010 282 NDGVDVISISIGGGDGISSPYYLDPI-----AIGSYG--AASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNF 354 (779)
Q Consensus 282 ~~gvdVIn~SlG~~~g~~~~~~~d~~-----~~a~~~--a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~ 354 (779)
.++++|||+|||... ..+...+.. ..++.. ...+|+++|+||||.+....... ..
T Consensus 168 ~~~~~I~n~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~-----~~----------- 229 (600)
T 3hjr_A 168 SRDNRVFNQSYGMSV--VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG-----YV----------- 229 (600)
T ss_dssp HHTCSEEEECCCCCC--SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT-----EE-----------
T ss_pred hcCCCEEecccCccc--cCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc-----cc-----------
Confidence 889999999999763 122222222 111111 23689999999999874311000 00
Q ss_pred eeEEEeCCCeEEEeEEeecCCCCCCceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCchhhHHHHHHHcCc
Q 004010 355 PAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGG 434 (779)
Q Consensus 355 ~~~~~l~~g~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga 434 (779)
....+.........|.. ++
T Consensus 230 -----------------------------~~~~g~~~~~~~~~~~~---d~----------------------------- 248 (600)
T 3hjr_A 230 -----------------------------LNRTGNGPKLPFENSNL---DP----------------------------- 248 (600)
T ss_dssp -----------------------------EEEESSCCCCCSSBTTS---SG-----------------------------
T ss_pred -----------------------------cccCCCCCCCCcccccc---cC-----------------------------
Confidence 00000000000001110 00
Q ss_pred eEEEEeccCCCCCccccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecceeecccCCCccccccCCCCCCCCCCCC
Q 004010 435 VGMILANGISNGEGLVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEIL 514 (779)
Q Consensus 435 ~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~l 514 (779)
......++.|.+. ...+.++.||++|+..
T Consensus 249 -----------------~~~~~~~IsVgA~----------------------------~~~g~~a~yS~~G~~v------ 277 (600)
T 3hjr_A 249 -----------------SNSNFWNLVVSAL----------------------------NADGVRSSYSSVGSNI------ 277 (600)
T ss_dssp -----------------GGGSSSEEEEEEE----------------------------CTTSSBCTTCCBCTTC------
T ss_pred -----------------ccccCcceEEeee----------------------------cCCCCEeecccCCcce------
Confidence 0000011122211 1335789999999986
Q ss_pred CCeEEeCCCcE-------Ee-eecCCCCCC-------------CCCCCCccceeEeecCccchhhhHHHHHHHHHhhCCC
Q 004010 515 KPDLIAPGVNI-------LA-AWTEAVGPT-------------GLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPD 573 (779)
Q Consensus 515 KPDI~APG~~I-------~s-a~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ 573 (779)
+++|||.++ .. ..++..... ..........|..++|||||||||||++|||+|+||+
T Consensus 278 --~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~ 355 (600)
T 3hjr_A 278 --FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPD 355 (600)
T ss_dssp --CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTT
T ss_pred --eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCC
Confidence 899999763 22 222110000 0011123347899999999999999999999999999
Q ss_pred CCHHHHHHHHHhccccccCCCCCCCc--------------------cCCCCCCCCCccCCCcccccccCCCCc
Q 004010 574 WSPAAIRSAMMTTASIVDNSNQPMTD--------------------EATGNASTPYDFGAGHVNLDRAMDPGL 626 (779)
Q Consensus 574 ~sp~~Ik~~L~~TA~~~~~~~~~~~~--------------------~~~~~~~~~~~~G~G~vn~~~Al~~gl 626 (779)
||++|||++|++||++++....|+.. ...+.. -...||+|+||+.+|++...
T Consensus 356 lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 356 LSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FSPTYGFGLIDVNKALELAA 427 (600)
T ss_dssp SCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE-EBTTTBTCBCCHHHHHHHHT
T ss_pred CCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCce-EccccCCceecHHHHHHHhh
Confidence 99999999999999998866554211 111111 13478999999999987443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=1.9e-25 Score=255.65 Aligned_cols=96 Identities=28% Similarity=0.473 Sum_probs=77.2
Q ss_pred eeeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh---CCCcEEEeccCCCCCCCCCC---CCCHHHHHHHHHhcCCcE
Q 004010 247 AKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN---DGVDVISISIGGGDGISSPY---YLDPIAIGSYGAASRGVF 320 (779)
Q Consensus 247 ~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~---~gvdVIn~SlG~~~g~~~~~---~~d~~~~a~~~a~~~Gi~ 320 (779)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||+|||... ..+ +...+..++.+|..+||+
T Consensus 274 ~~gvAp~a~i~~~~~~-----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e---~~~~~~~~~~~~~~~~~a~~~Gi~ 345 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP-----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE---DSWAPASIAAMNRAFLDAAALGVT 345 (552)
T ss_dssp HHHHCTTSEEEEEECC-----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG---GGSCHHHHHHHHHHHHHHHHTTCE
T ss_pred hhccCCCCeEEEEEcC-----CCCchHHHHHHHHHhcccCCCCEEEecccCCc---ccCCHHHHHHHHHHHHHHHhCCeE
Confidence 5799999999999973 246789999999998 79999999999872 211 123566667788899999
Q ss_pred EEEccCCCCCCC--------CccccCCCceEEeccCcc
Q 004010 321 VSSSAGNDGPNG--------MSVTNLAPWIVTVGAGTI 350 (779)
Q Consensus 321 vV~AAGN~G~~~--------~~~~~~~p~vitVgAst~ 350 (779)
||+||||+|... ...++..|||++||+++.
T Consensus 346 vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 346 VLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999999999653 345678999999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=6e-22 Score=216.06 Aligned_cols=103 Identities=20% Similarity=0.225 Sum_probs=80.8
Q ss_pred eeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhhh-CCCcEEEeccCCCCCC-CCCCCCCHHHHHHHHHhcCCcEEEEcc
Q 004010 248 KGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN-DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAASRGVFVSSSA 325 (779)
Q Consensus 248 ~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~-~gvdVIn~SlG~~~g~-~~~~~~d~~~~a~~~a~~~Gi~vV~AA 325 (779)
..+||+++++.|++.+.. +++.++++++|+||++ ++++|||||||..... ....+.+.+..++.+|..+||+||+|+
T Consensus 90 g~~aP~a~~~~~~~~~~~-~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~As 168 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS-ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSS 168 (372)
T ss_dssp HHTTSCEEEEEEEEECTT-SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcCCCCcEEEEEeCCCC-CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 457999999999998765 5778899999999998 8999999999986200 001123456677778889999999999
Q ss_pred CCCCCCCC-------------ccccCCCceEEeccCccC
Q 004010 326 GNDGPNGM-------------SVTNLAPWIVTVGAGTID 351 (779)
Q Consensus 326 GN~G~~~~-------------~~~~~~p~vitVgAst~d 351 (779)
||+|...+ ..+...|||++||+++..
T Consensus 169 Gd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 169 GDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp CSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99997642 455788999999997653
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.04 E-value=8.8e-11 Score=105.52 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=66.5
Q ss_pred CCCceEEEEeCCCCCCCCCcchHHHHHhhhCC--C-ceeEEEecceeeEEEEEeCHHHHHHHhCCCCeEEEEEcceecc
Q 004010 33 QTVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS--P-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (779)
Q Consensus 33 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 108 (779)
..+++|||+|++...+.....|++|+.+++.+ . .+++|+|++.|+||+++|+++++++|+++|+|.+|+||+.++.
T Consensus 35 ~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 35 RLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 45899999999887655566788999887654 2 6899999999999999999999999999999999999998864
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.03 E-value=2.7e-10 Score=129.36 Aligned_cols=101 Identities=18% Similarity=0.209 Sum_probs=63.6
Q ss_pred eeeCCCCeEEEEEeecCCCCCCHHHHHHHHHHhh--hCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHHhcCCcEEEEcc
Q 004010 248 KGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAV--NDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSA 325 (779)
Q Consensus 248 ~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~--~~gvdVIn~SlG~~~g~~~~~~~d~~~~a~~~a~~~Gi~vV~AA 325 (779)
.+++++..++.|...+. ......++..+++.. .+-++|||+|||.........+...+...+..+..+||.|++|+
T Consensus 262 ~a~~~~i~~~~~~~~g~--~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR--HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHHSTTSEEEEECCCSC--CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hccCCCceEEEEecCCc--ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 45566666665543211 112234454444433 35688999999987310111122345556667888999999999
Q ss_pred CCCCCCC----------CccccCCCceEEeccCcc
Q 004010 326 GNDGPNG----------MSVTNLAPWIVTVGAGTI 350 (779)
Q Consensus 326 GN~G~~~----------~~~~~~~p~vitVgAst~ 350 (779)
||+|... ...++..|||++||+++.
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9999742 245678999999999765
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.98 E-value=8.6e-10 Score=92.73 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=57.9
Q ss_pred CCCCceEEEEeCCCCCCCCCcchHHHHHhhhCCC-ceeEEEecceeeEEEEEeCHHHHHHHhCCCCeEEEEEcceecccc
Q 004010 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFASP-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHT 110 (779)
Q Consensus 32 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~ 110 (779)
...+++|||.|+++...... + ++++++. .++.|+|++ |+||+++++++++++|+++|+|.+||||+.+++++
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~--~----~~~~~~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~t 77 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAK--K----EDVISEKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALS 77 (80)
T ss_dssp ---CCEEEEEECTTCCSHHH--H----HHHHHTTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECC
T ss_pred ccCCCCEEEEECCCCChHHH--H----HHHHHHcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEee
Confidence 34589999999988653221 1 1223223 789999998 99999999999999999999999999999999887
Q ss_pred cC
Q 004010 111 TR 112 (779)
Q Consensus 111 ~~ 112 (779)
+.
T Consensus 78 t~ 79 (80)
T 3cnq_P 78 AT 79 (80)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.81 E-value=2.7e-09 Score=96.99 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=62.1
Q ss_pred CCCceEEEEeCCCCCCCCCcchHHHHHhhhCC--C-ceeEEEecceeeEEEEEeCHHHHHHHhCCCCeEEEEEcceecc
Q 004010 33 QTVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS--P-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (779)
Q Consensus 33 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 108 (779)
..+++|||.|+++........+.+++.+.+++ . .++.|+|++.|+||+++++++++++|+++|+|.+|+||+.++.
T Consensus 45 ~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 45 RLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 35899999999987654444555555554322 2 6899999999999999999999999999999999999998864
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.74 E-value=4.3e-08 Score=95.54 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=74.5
Q ss_pred ccccccCCCCCCC-------cccccEEEEcCCC-CchhhHHHHHHHcCceEEEEeccCCCCC---ccc-cCCcccCeEEE
Q 004010 394 SASLCMENSLDPN-------LVRGKIVICDRGS-SPRVAKGLVVKKAGGVGMILANGISNGE---GLV-GDAHLLPACAL 461 (779)
Q Consensus 394 ~~~~C~~~~~~~~-------~~~gkivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~---~~~-~~~~~~p~~~v 461 (779)
....|.+...... ..+|||+|++||. |.|.+|..+++++||.++|+||+...+. .+. .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 4678988654322 2579999999999 9999999999999999999999853221 111 22357999999
Q ss_pred chhhHHHHHHHHhcCCCCeEEEEecc
Q 004010 462 GSDEGDAVKAYISSTANPTATIDFKG 487 (779)
Q Consensus 462 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 487 (779)
+..+|+.|++++..+...+++|.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888776653
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.60 E-value=5.2e-08 Score=80.71 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=58.0
Q ss_pred ceEEEEeCCCCCCCCCcchHHHHHhhhCCCceeEEEec-ceeeEEEEEeCHHHHHHHhCC--CCeEEEEEcceecc
Q 004010 36 KTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYD-TVFHGFSATLSPDQAASLSRH--PSVLAVIEDQRRQL 108 (779)
Q Consensus 36 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~-~~~~g~s~~l~~~~~~~L~~~--p~V~~V~~~~~~~~ 108 (779)
+.|||.|+++........+.+++.+.- .++.+.|. ..|+||+++++++.+++|+++ |.|.+||+|+.+++
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~~g---g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIAEG---GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHT---CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhhC---CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 789999999876555555666655432 57899994 799999999999999999999 89999999998764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.67 E-value=6.7e-05 Score=59.78 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=50.0
Q ss_pred ceEEEEeCCCCCCCCCcchHHHHHhhhCCC-ceeEEEecceeeEEEEEeCHHHHHHHhCCCCeEEEEEcceecc
Q 004010 36 KTFIFRIDSQSKPSIFPTHYHWYSSEFASP-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (779)
Q Consensus 36 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 108 (779)
.+|||.|+++.. ..+.+++. +++.++|. .+++++++|+++.++.|+++|+|++|++|...+.
T Consensus 2 ~~~IV~f~~~~~----------~~~~i~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 2 IRVIVSVDKAKF----------NPHEVLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp EEEEEEECGGGC----------CGGGGGGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred eeEEEEEcCcch----------hHHHHHHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 489999987521 11223333 89999997 8999999999999999999999999999987753
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.98 E-value=0.0046 Score=68.37 Aligned_cols=70 Identities=27% Similarity=0.347 Sum_probs=58.3
Q ss_pred CCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCCc--cc-cCCcccCeEEEchhhHHHHHHHHh
Q 004010 405 PNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEG--LV-GDAHLLPACALGSDEGDAVKAYIS 474 (779)
Q Consensus 405 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~~-~~~~~~p~~~v~~~~g~~l~~~~~ 474 (779)
..+++|||+|++++.|.+..|..+++++||.|+|++++...... +. .....+|++.++..+++.|++++.
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 34899999999999999999999999999999999998642211 11 134679999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=96.21 E-value=0.02 Score=63.64 Aligned_cols=102 Identities=12% Similarity=0.205 Sum_probs=71.0
Q ss_pred CceEeEEecCCCCCcccccccCCCCCCCcccccEEEEcCCCCc---------hhhH----HHHHHHcCceEEEEeccCCC
Q 004010 379 EKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSP---------RVAK----GLVVKKAGGVGMILANGISN 445 (779)
Q Consensus 379 ~~~~~~v~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~~ 445 (779)
...-++|+..+ ...|.. ..+.+++|||||+.++.|. +..| ..+++++||+|+|++++...
T Consensus 105 ~vta~lV~v~~-----~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~ 177 (444)
T 3iib_A 105 GLSATIVRFDT-----LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTD 177 (444)
T ss_dssp CEEEEEEEESS-----HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSC
T ss_pred CeEEEEEecCC-----HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCc
Confidence 45678887542 222332 2356899999999998874 3333 35799999999999987543
Q ss_pred CCc--------cccCCcccCeEEEchhhHHHHHHHHhcCCCCeEEEEecc
Q 004010 446 GEG--------LVGDAHLLPACALGSDEGDAVKAYISSTANPTATIDFKG 487 (779)
Q Consensus 446 ~~~--------~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~ 487 (779)
... .......+|++.|+..+++.|++.+..+...++++....
T Consensus 178 ~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 178 HDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred ccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 211 111235799999999999999999988766666665443
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.85 E-value=0.013 Score=67.66 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=55.3
Q ss_pred CcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCCCC------------------ccc----------------c
Q 004010 406 NLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGE------------------GLV----------------G 451 (779)
Q Consensus 406 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~------------------~~~----------------~ 451 (779)
.+++|||+|+++|.|.+..|..+|+++||+|+|++++..... .+. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 579999999999999999999999999999999998764210 000 0
Q ss_pred CCcccCeEEEchhhHHHHHHHHh
Q 004010 452 DAHLLPACALGSDEGDAVKAYIS 474 (779)
Q Consensus 452 ~~~~~p~~~v~~~~g~~l~~~~~ 474 (779)
....||+..|+..+++.|++.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999987654
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.53 E-value=0.018 Score=67.39 Aligned_cols=71 Identities=25% Similarity=0.360 Sum_probs=56.3
Q ss_pred CCcccccEEEEcCCCCchhhHHHHHHHcCceEEEEeccCCC-------------------------------CCcccc--
Q 004010 405 PNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISN-------------------------------GEGLVG-- 451 (779)
Q Consensus 405 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~-------------------------------~~~~~~-- 451 (779)
..+++|||+|+++|.|.+.+|..+|+++||+|+|++++..+ |..+.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 35799999999999999999999999999999999986320 000000
Q ss_pred ---------------CCcccCeEEEchhhHHHHHHHHhc
Q 004010 452 ---------------DAHLLPACALGSDEGDAVKAYISS 475 (779)
Q Consensus 452 ---------------~~~~~p~~~v~~~~g~~l~~~~~~ 475 (779)
....||++.|+..+++.|++.+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 124799999999999999987653
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.14 E-value=0.05 Score=48.80 Aligned_cols=52 Identities=25% Similarity=0.346 Sum_probs=44.1
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 686 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
.+.+.+..|+|+|+.+..|+.....| .+|+|...++ ++||+..++|+|....
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~-----F~i~P~~g~L-~pg~~~~i~V~F~P~~ 92 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP-----FSIEPAIGTL-NVGESMQLEVEFEPQS 92 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT-----EEEESSEEEE-CTTCEEEEEEEECCSS
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC-----eEEECCcCEE-CCCCEEEEEEEEEcCC
Confidence 46778889999999999998776555 6678999999 7999999999999764
No 49
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=87.65 E-value=1.3 Score=48.86 Aligned_cols=30 Identities=27% Similarity=0.259 Sum_probs=25.7
Q ss_pred CCccccccCCCCCCCCCCCCCCeEEeCCCcEEeeecCC
Q 004010 495 APVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEA 532 (779)
Q Consensus 495 ~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 532 (779)
.+.++.||++|+.. ||+|||++|+++++.+
T Consensus 183 ~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 45789999999854 9999999999998753
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=86.25 E-value=0.33 Score=59.89 Aligned_cols=24 Identities=33% Similarity=0.606 Sum_probs=22.4
Q ss_pred CCCCCCcEEEEEecCCCCCCCCcc
Q 004010 129 SDYGSDVIIGVFDTGIWPERRSFS 152 (779)
Q Consensus 129 ~~~G~gv~VgVIDtGid~~Hp~f~ 152 (779)
.+.|+||+|||+|||||+.+|.|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 578999999999999999999995
No 51
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=84.14 E-value=4.6 Score=36.77 Aligned_cols=89 Identities=10% Similarity=-0.005 Sum_probs=58.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCC---CCeEEEEecCeeEeccCceEEEEEEEEEeccc---ccccCCCcceEEEEE
Q 004010 686 SSKSFIRTVTNVGQPNAVYTVKVVSPE---KGVTVTVKPSRLVFTEGVKKSSFVVTVTADSK---NLVLNDSGAAFGSIS 759 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty~~~~~~p~---~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~---~~~~~~~~~~~G~~~ 759 (779)
...+.+.+++|+|..+.+|++...... ..--++|+|..-++ .+|++..++|++.+... .|.....- ..--|+
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~-l~diLv 120 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDK-IEDILV 120 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSC-SCEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhh-hheeEE
Confidence 345677889999999999999753210 11236678999888 79999999999986431 00011111 345566
Q ss_pred EE-CCceEEEeEEEEEec
Q 004010 760 WS-DGKHEVRSPLVVTQL 776 (779)
Q Consensus 760 ~~-~~~~~v~~P~~v~~~ 776 (779)
+. .++....+|+-..+.
T Consensus 121 L~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 121 LHLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EEETTSCEEEEEEEEEEC
T ss_pred EEeecCCcEEEEEecccc
Confidence 64 567777888877654
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.57 E-value=0.53 Score=41.01 Aligned_cols=57 Identities=12% Similarity=0.214 Sum_probs=42.5
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 686 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
...+.+.+++|.|+.+..|+........+...+++|..-.+ ++|++++++|+|....
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 34666788999999999998833111022347778999888 7999999999999754
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=78.82 E-value=7.8 Score=34.00 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=44.4
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 687 SKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 687 ~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
.-..+..+.|....+.+|.+++... +|+++. .|..+.+ ++||+.++.|.+.+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~-~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGL-NDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESC-SSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCC-cccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 4457788999999999999999987 776653 3556887 7999999999999875
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=74.13 E-value=9.9 Score=37.34 Aligned_cols=63 Identities=14% Similarity=0.158 Sum_probs=44.1
Q ss_pred CCCccchhhhcccCCCCceeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 668 NLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 668 ~lN~ps~~~~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
.++|..+... ...+.+.+++|.|+.+.+++... .| +-+++...|..| ++||+.+++|+++...
T Consensus 9 ~idFg~v~~g--------~~~~~~~~i~N~g~~pl~i~~~~-~p-~~~~~~~~~~~I---~PG~~g~I~vt~~~~~ 71 (220)
T 2qsv_A 9 RLLFPISMPE--------DEGVVRLVVNNTDESDLQVAVVS-LP-SFVSLDDRAFRL---QAREPRELNLSLAVPR 71 (220)
T ss_dssp EEECCSBCTT--------CCCEEEEEEEECSSSCEEEEEEE-CC-TTEECSCCEEEE---CSSSCEEEEEEECCCT
T ss_pred eeEcccccCC--------CcceEEEEEEeCCCCceEEEecc-CC-CceEeeeCccee---CCCCceEEEEEEcchh
Confidence 4566655432 34566888999999888887643 36 566665555544 7999999999998764
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=57.90 E-value=32 Score=30.54 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=35.5
Q ss_pred eeEEEEEEEEecCCCC-eEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEE
Q 004010 686 SSKSFIRTVTNVGQPN-AVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVT 740 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~-~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~ 740 (779)
...+++.+|+|.|... ..|++.+..- |-.+.-. ...+ ++|++++++++..
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvn--g~~v~t~--~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYIN--GTLYKNW--TVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEET--TEEEEEE--EEEE-CTTCEEEEEEEEC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEEC--CEEEeeE--Eecc-CCCCeEEEEEEEE
Confidence 5789999999999855 5688776544 5554433 2345 6898888777765
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=56.33 E-value=20 Score=38.12 Aligned_cols=89 Identities=10% Similarity=0.034 Sum_probs=56.2
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeE---EEEecCeeEeccCceEEEEEEEEEecccc---cccCCCcceEEEEE
Q 004010 686 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVT---VTVKPSRLVFTEGVKKSSFVVTVTADSKN---LVLNDSGAAFGSIS 759 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~---v~v~p~~l~~~~~g~~~~~~vt~~~~~~~---~~~~~~~~~~G~~~ 759 (779)
...+-+.||+|+|..+.+|+..-........ ++|+|..-++ .+|++.+++|++.+...- +.....- ..--|+
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~-l~diLv 123 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDK-IEDILV 123 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSC-SCEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccc-cceEEE
Confidence 4567778899999999999986543211222 7788999888 799999999999876410 0000111 233455
Q ss_pred EE-CCceEEEeEEEEEec
Q 004010 760 WS-DGKHEVRSPLVVTQL 776 (779)
Q Consensus 760 ~~-~~~~~v~~P~~v~~~ 776 (779)
+. ++++...+|+-..+.
T Consensus 124 L~ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 124 LHLDRGKDYFLTISGNYL 141 (366)
T ss_dssp EEETTSCEEEEEEEEEEC
T ss_pred EEEeCCCcEEEEeccccC
Confidence 53 455555666655553
No 57
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=51.32 E-value=36 Score=30.07 Aligned_cols=52 Identities=15% Similarity=0.179 Sum_probs=42.2
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004010 687 SKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 742 (779)
Q Consensus 687 ~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 742 (779)
..+-..+++|.++...-|.+...+| .- ..|.|..=.+ ++|++..++|++...
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p-~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAP-RR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCG-GG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCC-Cc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 4556788999999999999999988 44 5668987666 799999999998753
No 58
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=49.28 E-value=40 Score=32.84 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=35.3
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 686 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
...+.+.+++|+|+.+...+- +... -|... +++..-.+ ++||+.+++|+++...
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~-v~~s-cgct~-~~~~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHS-VTTR-NPALT-AVPDRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEE-EEEC-STTEE-EEESCSEE-CTTCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEEE-EEeC-CCCEe-eecCCccC-CCCCEEEEEEEEecCC
Confidence 356778899999998776542 2233 33332 23333344 7999999999998654
No 59
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=46.59 E-value=63 Score=27.74 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=39.4
Q ss_pred EEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004010 690 FIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 742 (779)
Q Consensus 690 ~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 742 (779)
-+.+++|..+....|.+....| .- ..|.|..=.+ ++|++.++.|+....
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p-~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNN-NE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCS-SS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCC-Cc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 4677889999999999999888 55 4557886555 799999999888753
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=44.25 E-value=54 Score=28.61 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=39.3
Q ss_pred EEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004010 689 SFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 742 (779)
Q Consensus 689 t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 742 (779)
+.+.+++|.++....|.++...| .- ..|.|..=.+ ++|++.++.|+....
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p-~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNN-EH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCT-TT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCC-Cc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 44677899999989999998888 55 4557886555 799999999888753
No 61
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=42.69 E-value=53 Score=30.08 Aligned_cols=51 Identities=22% Similarity=0.297 Sum_probs=41.6
Q ss_pred EEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004010 688 KSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 742 (779)
Q Consensus 688 ~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 742 (779)
.+-..+++|..+....|.+...+| .- ..|.|..=.+ ++|++.+++|++...
T Consensus 37 ~~~~l~L~N~s~~~VaFKVKTT~p-~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 37 KKTLIVLTNVTKNIVAFKVRTTAP-EK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCEEEEEEBCSSSCEEEEEEESCT-TT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred EEEEEEEEcCCCCeEEEEEECCCC-Cc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 345678999999999999999999 54 5568987666 799999999998754
No 62
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=42.21 E-value=53 Score=29.00 Aligned_cols=50 Identities=18% Similarity=0.309 Sum_probs=40.9
Q ss_pred EEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEe
Q 004010 688 KSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTA 741 (779)
Q Consensus 688 ~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~ 741 (779)
.+-..+++|.++...-|.+...+| .- ..|.|..=.+ ++|++..+.|++..
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT~p-~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTTNM-RR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEESCT-TT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred eEEEEEEECCCCCeEEEEEEcCCC-Cc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 344578899999999999999998 55 4568987777 79999999998876
No 63
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=39.29 E-value=48 Score=30.11 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=41.2
Q ss_pred EEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004010 688 KSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 742 (779)
Q Consensus 688 ~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 742 (779)
.+-..+++|.++...-|.+...+| .- ..|.|..=.+ +++++..++|++...
T Consensus 33 ~~~~l~L~N~s~~~VaFKVKTT~p-~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 33 VTTNLKLQNPSDRKVCFKVKTTAP-RR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCEEEEEECCSSSCEEEEEEESCT-TS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred EEEEEEEECCCCCcEEEEEECCCC-cc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 345678899999999999999999 54 4568987655 799999999998763
No 64
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=35.59 E-value=1.5e+02 Score=33.21 Aligned_cols=54 Identities=15% Similarity=0.008 Sum_probs=37.9
Q ss_pred eeEEEEEEEEecCCCCeEE-EEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004010 686 SSKSFIRTVTNVGQPNAVY-TVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 743 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty-~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 743 (779)
.+.+++.+|+|-+.....- ++++..| .|.+++. ....+ ++|++.+++++|+...
T Consensus 373 ~~~~~~~~vtn~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 373 QQVTVPVAVTNQSGIAVPKPSLQLDAS-PDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp CEEEEEEEEECCSSSCBSSCEEEEECC-TTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred ceeEEEEEEECCCceeccCceEEEecC-CCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 5778889999976533211 3446668 8888876 34455 6899999988888764
No 65
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=35.54 E-value=26 Score=26.60 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=27.6
Q ss_pred cchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 004010 554 SMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 590 (779)
Q Consensus 554 SmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~ 590 (779)
|-..|..--....|++.+|+++...|+.+|...-..+
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3334444556788999999999999999998765443
No 66
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=35.30 E-value=34 Score=39.94 Aligned_cols=73 Identities=10% Similarity=0.106 Sum_probs=40.3
Q ss_pred CCCCCccchhhhccc--CCCCceeEEEEEEEEecCCCCeEEE--EEEEcCCCCe-----EEEEecCee-EeccCceEEEE
Q 004010 666 PENLNYPSIAALFST--QSRGVSSKSFIRTVTNVGQPNAVYT--VKVVSPEKGV-----TVTVKPSRL-VFTEGVKKSSF 735 (779)
Q Consensus 666 ~~~lN~ps~~~~~~~--~~~~~~~~t~~rtvtNvg~~~~ty~--~~~~~p~~g~-----~v~v~p~~l-~~~~~g~~~~~ 735 (779)
..-|.|-+|...... ... ...+++.+|||+|+....-. +=+..|..++ .+. --..+ .+ ++||++++
T Consensus 595 G~GLSYTtF~ys~~~~~~~~--~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~-gF~kv~~L-~pGes~~V 670 (721)
T 2x41_A 595 GYGLSYTTFEYSDLNVSFDG--ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELK-AFHKTRLL-NPGESEEV 670 (721)
T ss_dssp TCCBCSSCEEEEEEEEEECS--SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEE-EEEECCCB-CTTCEEEE
T ss_pred CCCCCcceeEeeceEeecCC--CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhh-cccccccC-CCCCeEEE
Confidence 344566555543221 011 46789999999998554333 3334441111 111 11123 33 79999999
Q ss_pred EEEEEec
Q 004010 736 VVTVTAD 742 (779)
Q Consensus 736 ~vt~~~~ 742 (779)
+++++..
T Consensus 671 ~~~l~~~ 677 (721)
T 2x41_A 671 VLEIPVR 677 (721)
T ss_dssp EEEEEGG
T ss_pred EEEECHH
Confidence 9888864
No 67
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=33.59 E-value=75 Score=36.94 Aligned_cols=54 Identities=9% Similarity=0.148 Sum_probs=34.4
Q ss_pred eeEEEEEEEEecCCCCeEEEEEE--EcCCCCe------EEEEecCeeEeccCceEEEEEEEEEec
Q 004010 686 SSKSFIRTVTNVGQPNAVYTVKV--VSPEKGV------TVTVKPSRLVFTEGVKKSSFVVTVTAD 742 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~ty~~~~--~~p~~g~------~v~v~p~~l~~~~~g~~~~~~vt~~~~ 742 (779)
...+++.+|||+|+....-.+.+ ..| .+- .+. --..+.+ ++||+++++++++..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~-~~~~~~P~k~L~-gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYP-SSAPRTPPKQLR-GFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECC-TTSSSCCSCEEE-EEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecC-CCCCCchhHHhh-hccccee-CCCCeEEEEEEEcHH
Confidence 46789999999998765554443 344 221 111 1122345 799999999888864
No 68
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=33.41 E-value=1e+02 Score=36.65 Aligned_cols=72 Identities=14% Similarity=0.089 Sum_probs=41.9
Q ss_pred CCCCCCccchhhh--cccCCCCceeEEEEEEEEecC-CCCeEEEEEE--EcCCCCe-----EEEEecCeeEeccCceEEE
Q 004010 665 RPENLNYPSIAAL--FSTQSRGVSSKSFIRTVTNVG-QPNAVYTVKV--VSPEKGV-----TVTVKPSRLVFTEGVKKSS 734 (779)
Q Consensus 665 ~~~~lN~ps~~~~--~~~~~~~~~~~t~~rtvtNvg-~~~~ty~~~~--~~p~~g~-----~v~v~p~~l~~~~~g~~~~ 734 (779)
+..-|.|-+|... ...-.. ...+++.+|||+| +....-.+.+ ..|...+ .+. --..+.+ ++||+++
T Consensus 714 FG~GLSYTtF~ys~~~l~v~~--~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~-gF~kv~L-~pGes~~ 789 (845)
T 3abz_A 714 FGYGLSYTTFELDISDFKVTD--DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELK-GFEKVHL-EPGEKKT 789 (845)
T ss_dssp TTCCBCSSCEEEEEEEEEECS--SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEE-EEEEEEE-CTTCEEE
T ss_pred ccCCCcceeEEEecccccccC--CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheec-cceeEEE-CCCCEEE
Confidence 4556777777654 221101 4678999999999 7655444333 3331111 111 1112345 7999999
Q ss_pred EEEEEE
Q 004010 735 FVVTVT 740 (779)
Q Consensus 735 ~~vt~~ 740 (779)
++++++
T Consensus 790 V~~~l~ 795 (845)
T 3abz_A 790 VNIDLE 795 (845)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 999988
No 69
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=30.91 E-value=11 Score=33.05 Aligned_cols=52 Identities=25% Similarity=0.262 Sum_probs=31.4
Q ss_pred EEEEEEEecCCCCeEEEEEEE-cCCCCeEEEEecCeeEec-cCceEEEEEEEEEe
Q 004010 689 SFIRTVTNVGQPNAVYTVKVV-SPEKGVTVTVKPSRLVFT-EGVKKSSFVVTVTA 741 (779)
Q Consensus 689 t~~rtvtNvg~~~~ty~~~~~-~p~~g~~v~v~p~~l~~~-~~g~~~~~~vt~~~ 741 (779)
.+..-++|.+.+..+..+.+. .| .|+++++.|+.+++. ..-++++|.|+++.
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp-~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFP-GDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSC-TTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCC-CCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 334445566644444455556 68 899999999987654 23344556555544
No 70
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=24.48 E-value=2e+02 Score=24.31 Aligned_cols=65 Identities=15% Similarity=0.186 Sum_probs=42.5
Q ss_pred chhhhcccCCCCceeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecccccccCCCc
Q 004010 673 SIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSG 752 (779)
Q Consensus 673 s~~~~~~~~~~~~~~~t~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~~ 752 (779)
.++|.|.. ....++.||+|-..+...|.-.+..| . .++ +.+ ..-++-.|+|.+.... .+
T Consensus 35 vlsV~F~~-----~~~~vTItItNe~TG~~VYs~~~s~p-~--~i~-----IdL-nge~sG~Y~IeI~~~~-------~~ 93 (101)
T 3sd2_A 35 ILNVSFGR-----AKDYAIITVTNKATGEIVHSKTYHNT-S--IVM-----IDM-SSCEKGEYTIHIILND-------CL 93 (101)
T ss_dssp EEEEEESS-----CCSCEEEEEEETTTCCEEEEEEESSC-S--EEE-----EEC-TTSCSEEEEEEEEETT-------EE
T ss_pred EEEEEecc-----CCCcEEEEEEECCCCcEEEEEeccCC-c--EEE-----EEc-CCCcCceEEEEEEeCC-------cE
Confidence 55556654 34567889999877888998888777 3 333 233 2345678999888654 33
Q ss_pred ceEEEEE
Q 004010 753 AAFGSIS 759 (779)
Q Consensus 753 ~~~G~~~ 759 (779)
..|..+
T Consensus 94 -LtG~F~ 99 (101)
T 3sd2_A 94 -LEGTFT 99 (101)
T ss_dssp -EEEEEE
T ss_pred -EEEEEE
Confidence 667654
No 71
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=24.24 E-value=3e+02 Score=23.95 Aligned_cols=68 Identities=9% Similarity=-0.014 Sum_probs=40.9
Q ss_pred eeEEEEEEEEecCCCCeE--------EEEEEEcCCCCeEEE---------EecCeeEeccCceEEEEEEEEEeccccccc
Q 004010 686 SSKSFIRTVTNVGQPNAV--------YTVKVVSPEKGVTVT---------VKPSRLVFTEGVKKSSFVVTVTADSKNLVL 748 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~~t--------y~~~~~~p~~g~~v~---------v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~ 748 (779)
....++.+|+|.++.+.+ |.+.+... .|-.|= -.....++ ++||+++|+.++.-.. .
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~-~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~~----~ 91 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDS-EHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEVP----E 91 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECT-TCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSCC----C
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECC-CCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCCC----C
Confidence 467889999999975443 45555544 453332 11224556 7999999999988321 2
Q ss_pred CCCcceEEEEE
Q 004010 749 NDSGAAFGSIS 759 (779)
Q Consensus 749 ~~~~~~~G~~~ 759 (779)
.+.|.+.+.++
T Consensus 92 pG~Ytl~a~l~ 102 (120)
T 3isy_A 92 PGTYEVKVTFK 102 (120)
T ss_dssp SEEEEEEEEEC
T ss_pred CccEEEEEEEE
Confidence 23443555554
No 72
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=22.49 E-value=60 Score=29.84 Aligned_cols=26 Identities=23% Similarity=0.207 Sum_probs=23.8
Q ss_pred hhhhHHHHHHHHHhhCCCCCHHHHHH
Q 004010 556 ACPHVSGAAALLKSAHPDWSPAAIRS 581 (779)
Q Consensus 556 AaP~VAG~aALl~~~~P~~sp~~Ik~ 581 (779)
=|+.|-|++|||.+.+-..+|+||.+
T Consensus 84 DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 84 EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 37999999999999999999999964
No 73
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=20.65 E-value=3.2e+02 Score=23.45 Aligned_cols=24 Identities=17% Similarity=0.448 Sum_probs=17.1
Q ss_pred eeEEEEEEEEecCCCC-eEEEEEEE
Q 004010 686 SSKSFIRTVTNVGQPN-AVYTVKVV 709 (779)
Q Consensus 686 ~~~t~~rtvtNvg~~~-~ty~~~~~ 709 (779)
...+++.+|+|.|... ..+.+.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 5789999999999743 33555543
Done!