Your job contains 1 sequence.
>004012
MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF
KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF
INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGY
GQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMD
EIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVK
LLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF
TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA
SSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFI
GIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVA
FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICH
ECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK
SMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVES
LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004012
(779 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2019848 - symbol:NUDT3 "nudix hydrolase homolo... 3029 7.8e-316 1
UNIPROTKB|Q486U4 - symbol:CPS_1178 "Putative uncharacteri... 658 1.2e-73 2
TIGR_CMR|CPS_1178 - symbol:CPS_1178 "lipoprotein, putativ... 658 1.2e-73 2
DICTYBASE|DDB_G0269784 - symbol:DDB_G0269784 "Uncharacter... 340 6.6e-30 1
TIGR_CMR|BA_1964 - symbol:BA_1964 "mutT/nudix family prot... 175 3.4e-12 1
UNIPROTKB|Q46822 - symbol:idi species:83333 "Escherichia ... 142 1.2e-08 1
TIGR_CMR|CBU_0607 - symbol:CBU_0607 "diphosphomevalonate ... 163 1.9e-08 1
TIGR_CMR|SPO_0131 - symbol:SPO_0131 "isopentyl-diphosphat... 127 3.3e-06 1
ASPGD|ASPL0000061206 - symbol:AN0579 species:162425 "Emer... 136 4.2e-06 1
TAIR|locus:2075412 - symbol:IPP2 "isopentenyl pyrophospha... 134 8.5e-06 1
POMBASE|SPBC106.15 - symbol:idi1 "isopentenyl-diphosphate... 131 8.9e-06 1
TAIR|locus:2171382 - symbol:IPP1 "isopentenyl diphosphate... 134 9.1e-06 1
TAIR|locus:2058334 - symbol:NUDT6 "nudix hydrolase homolo... 122 0.00023 2
UNIPROTKB|Q13907 - symbol:IDI1 "Isopentenyl-diphosphate D... 115 0.00064 1
UNIPROTKB|I3LDY2 - symbol:LOC100739304 "Uncharacterized p... 117 0.00070 1
UNIPROTKB|G4MT46 - symbol:MGG_07125 "Isopentenyl-diphosph... 115 0.00088 1
>TAIR|locus:2019848 [details] [associations]
symbol:NUDT3 "nudix hydrolase homolog 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008239
"dipeptidyl-peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA;ISS] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA;RCA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005773
GO:GO:0046872 eggNOG:COG0494 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:AC010793 EMBL:AK117805 EMBL:AY056442
EMBL:AY120774 EMBL:BT000142 IPI:IPI00524923 IPI:IPI00535410
RefSeq:NP_565218.1 UniGene:At.21701 UniGene:At.48398
ProteinModelPortal:Q8L831 SMR:Q8L831 IntAct:Q8L831 PaxDb:Q8L831
PRIDE:Q8L831 ProMEX:Q8L831 EnsemblPlants:AT1G79690.1 GeneID:844308
KEGG:ath:AT1G79690 TAIR:At1g79690 HOGENOM:HOG000002707
InParanoid:Q8L831 OMA:FRSIRFG PhylomeDB:Q8L831 ProtClustDB:PLN02791
Genevestigator:Q8L831 GermOnline:AT1G79690 Uniprot:Q8L831
Length = 772
Score = 3029 (1071.3 bits), Expect = 7.8e-316, P = 7.8e-316
Identities = 569/771 (73%), Positives = 666/771 (86%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EEH DVLT +G+KTG++KPR EVHR GDYHR V+ WIF E+TQ+LLLQ R+D KDSWPG
Sbjct: 3 EEHFDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQ 62
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGD+SL+SAQREL+EELG+ LPKDAFE +F FLQ+ V NDGKFINNEF D
Sbjct: 63 WDISSAGHISAGDTSLLSAQRELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEFND 122
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVT L+PIPLEAFTLQ+ EVSAVKY+ YEEY+N L+K+DP++VPYDVNG YG+LF+II
Sbjct: 123 VYLVTILHPIPLEAFTLQKEEVSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFDII 182
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
QR + NT RSL+LQKQL+RY+ V+L A+L LS+AD++AL L++KAA +MD+IFY QV
Sbjct: 183 RQRCQVNTEARSLSLQKQLQRYSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYEQV 242
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SNP LRDWLK+HA+AS+LDKLKW Y+ INKSPWSSLDENEAFL+TADSAVKLLP ATK
Sbjct: 243 WNSNPALRDWLKDHANASKLDKLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGATK 302
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
+ GWKGLEY+A+FP+ KPPGANFYPPDMDKMEF LW + LTE+Q+ AT FF+VIKRRS
Sbjct: 303 AIAGWKGLEYRAAFPVTKPPGANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKRRS 362
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
E NLD+S H+ +T S DLYS+PYSE Y +L +ASE L KAGD+ SSPSLK+
Sbjct: 363 EANLDAS--DHLASSTKKLPDSNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSPSLKK 420
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LLHSKA+AFLSN YY+SDIAW++LDS+LD+TIGPYETYED IFGYKATFE FIGIRDDKA
Sbjct: 421 LLHSKAEAFLSNEYYESDIAWMDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDDKA 480
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
TA +KLFGDNL++LE NLP+++ YKS DV AAPIRVIQLIYNSGDVKGPQTVA+NLPNDE
Sbjct: 481 TADLKLFGDNLKLLEDNLPLESVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPNDE 540
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
+IVKDRGTSMVMLKNV EAKF++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIG
Sbjct: 541 KIVKDRGTSMVMLKNVQEAKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIG 600
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PH+ITLP G+ STVR ELQE+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFL
Sbjct: 601 PHTITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFL 660
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILT
Sbjct: 661 AGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILT 720
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQ +GDK AA+LLL KYCT+T PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 721 IQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 771
>UNIPROTKB|Q486U4 [details] [associations]
symbol:CPS_1178 "Putative uncharacterized protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR HOGENOM:HOG000002707
OMA:FRSIRFG RefSeq:YP_267921.1 STRING:Q486U4 GeneID:3518424
KEGG:cps:CPS_1178 PATRIC:21465605 eggNOG:bactNOG01271
ProtClustDB:CLSK932759 BioCyc:CPSY167879:GI48-1259-MONOMER
Uniprot:Q486U4
Length = 576
Score = 658 (236.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 141/378 (37%), Positives = 225/378 (59%)
Query: 393 LYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIEL- 451
L SVP+SE Y+ +TRA+ +L +A A L +A A ++ Y SD AW+++
Sbjct: 191 LMSVPFSEIYHDQMTRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFAWMDMK 250
Query: 452 DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 511
++ +DV IGP E+YED ++GY+A FE+++ I+D + ++ + L L++ LP+ Y
Sbjct: 251 NNPIDVVIGPIESYEDQLYGYRAAFESYVLIKDLAWSEKLAKYAQFLPELQKGLPVGKKY 310
Query: 512 KSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK 569
K++ + A + +IY +G G +T+A NLPNDE + +GT + LKN AKF
Sbjct: 311 KAEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKKGTRRLQLKNAMRAKFD 370
Query: 570 NILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELH 629
I+ PIAD I EQ++ V F FF + + HE HG+G + TL +G Q VR L+E
Sbjct: 371 AIMLPIADTLIVPEQRKNVTFTGFFANTMFHEVAHGLGIKN-TL-NG-QGPVRQALKEHA 427
Query: 630 SAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQ 689
SA+EE KADI+GL+ ++ L+ + + ++ Y +F+AG FRS+RFG +HGK ++
Sbjct: 428 SALEEGKADILGLYMIRQLLVKGAITDGTLEDYYTTFMAGIFRSIRFGASSAHGKANMVR 487
Query: 690 FNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQ 749
FN+ EK AF + +S++ DK+ A++SLS ILT+Q GD + L+++ + +
Sbjct: 488 FNYFQEKGAFSRNEQGLYSINVDKMTAAIDSLSELILTLQGNGDYQGVDSLVKESGVIGE 547
Query: 750 PLKVALQKLENVQVPVDI 767
L L +LE ++PVDI
Sbjct: 548 TLAADLARLEEAKIPVDI 565
Score = 104 (41.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y V+L A+L+ LS K+ + L+I A+ +MD++F+ Q + + +L A
Sbjct: 64 EQRLNIYKEVTLTADLSHLSANQKQMVALLIDASKIMDDLFWQQAFSQDKA--SFL---A 118
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFL---TTADSAVKLLP-DATK 307
S+L ++ IN PW L+ ++ FL TT + P D TK
Sbjct: 119 SISDLTVRRFAE--INYGPWDRLNGDKVFLSQTTTKAHGAEFYPADMTK 165
Score = 81 (33.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV-DAT 383
K GA FYP DM K EFE +S ++K+ ++V++R ++ L S I D
Sbjct: 152 KAHGAEFYPADMTKAEFE--QSEFSDKK-----GLYSVVRRDNDGKLMSVPFSEIYHDQM 204
Query: 384 NHSVGSIYDLYSVPYSEEYNSYLTRASELL----HKAGDMA 420
+ + + +E+ +YLT ++ L ++A D A
Sbjct: 205 TRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFA 245
Score = 40 (19.1 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 116 NDGKFINNEFADVY 129
NDGK ++ F+++Y
Sbjct: 187 NDGKLMSVPFSEIY 200
>TIGR_CMR|CPS_1178 [details] [associations]
symbol:CPS_1178 "lipoprotein, putative" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000002707 OMA:FRSIRFG
RefSeq:YP_267921.1 STRING:Q486U4 GeneID:3518424 KEGG:cps:CPS_1178
PATRIC:21465605 eggNOG:bactNOG01271 ProtClustDB:CLSK932759
BioCyc:CPSY167879:GI48-1259-MONOMER Uniprot:Q486U4
Length = 576
Score = 658 (236.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 141/378 (37%), Positives = 225/378 (59%)
Query: 393 LYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIEL- 451
L SVP+SE Y+ +TRA+ +L +A A L +A A ++ Y SD AW+++
Sbjct: 191 LMSVPFSEIYHDQMTRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFAWMDMK 250
Query: 452 DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 511
++ +DV IGP E+YED ++GY+A FE+++ I+D + ++ + L L++ LP+ Y
Sbjct: 251 NNPIDVVIGPIESYEDQLYGYRAAFESYVLIKDLAWSEKLAKYAQFLPELQKGLPVGKKY 310
Query: 512 KSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK 569
K++ + A + +IY +G G +T+A NLPNDE + +GT + LKN AKF
Sbjct: 311 KAEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKKGTRRLQLKNAMRAKFD 370
Query: 570 NILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELH 629
I+ PIAD I EQ++ V F FF + + HE HG+G + TL +G Q VR L+E
Sbjct: 371 AIMLPIADTLIVPEQRKNVTFTGFFANTMFHEVAHGLGIKN-TL-NG-QGPVRQALKEHA 427
Query: 630 SAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQ 689
SA+EE KADI+GL+ ++ L+ + + ++ Y +F+AG FRS+RFG +HGK ++
Sbjct: 428 SALEEGKADILGLYMIRQLLVKGAITDGTLEDYYTTFMAGIFRSIRFGASSAHGKANMVR 487
Query: 690 FNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQ 749
FN+ EK AF + +S++ DK+ A++SLS ILT+Q GD + L+++ + +
Sbjct: 488 FNYFQEKGAFSRNEQGLYSINVDKMTAAIDSLSELILTLQGNGDYQGVDSLVKESGVIGE 547
Query: 750 PLKVALQKLENVQVPVDI 767
L L +LE ++PVDI
Sbjct: 548 TLAADLARLEEAKIPVDI 565
Score = 104 (41.7 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y V+L A+L+ LS K+ + L+I A+ +MD++F+ Q + + +L A
Sbjct: 64 EQRLNIYKEVTLTADLSHLSANQKQMVALLIDASKIMDDLFWQQAFSQDKA--SFL---A 118
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFL---TTADSAVKLLP-DATK 307
S+L ++ IN PW L+ ++ FL TT + P D TK
Sbjct: 119 SISDLTVRRFAE--INYGPWDRLNGDKVFLSQTTTKAHGAEFYPADMTK 165
Score = 81 (33.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV-DAT 383
K GA FYP DM K EFE +S ++K+ ++V++R ++ L S I D
Sbjct: 152 KAHGAEFYPADMTKAEFE--QSEFSDKK-----GLYSVVRRDNDGKLMSVPFSEIYHDQM 204
Query: 384 NHSVGSIYDLYSVPYSEEYNSYLTRASELL----HKAGDMA 420
+ + + +E+ +YLT ++ L ++A D A
Sbjct: 205 TRAAAILDEAAKFADDKEFANYLTMRAQALRTDEYQASDFA 245
Score = 40 (19.1 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 116 NDGKFINNEFADVY 129
NDGK ++ F+++Y
Sbjct: 187 NDGKLMSVPFSEIY 200
>DICTYBASE|DDB_G0269784 [details] [associations]
symbol:DDB_G0269784 "Uncharacterized Nudix hydrolase
yfcD" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
dictyBase:DDB_G0269784 EMBL:AAFI02000005 eggNOG:COG0494
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 RefSeq:XP_646275.1
ProteinModelPortal:Q55D56 STRING:Q55D56 EnsemblProtists:DDB0190551
GeneID:8617231 KEGG:ddi:DDB_G0269784 InParanoid:Q55D56 OMA:LIQKRAA
Uniprot:Q55D56
Length = 201
Score = 340 (124.7 bits), Expect = 6.6e-30, P = 6.6e-30
Identities = 73/199 (36%), Positives = 119/199 (59%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E++DV G G + PRSE+H G +HR V+ WI +S +L+Q+RA K+S P MW
Sbjct: 3 EYIDVCNEDGTSAGYSAPRSEIHEKGLWHRVVHIWI-VDSNGMVLIQKRAAHKESNPSMW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DIS AGHI AG +S +A +EL EELG+ ++ E +F++ +++++N+GK+++ E DV
Sbjct: 62 DISCAGHIEAGMNSKETAIKELFEELGLLYSQNDLELLFSYNKKSILNNGKYLDFEIPDV 121
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP-YDVNGG------YG 181
YL+T +P+ L LQ EVS K + E L+ +++ +F P YD + Y
Sbjct: 122 YLITLAHPLNLGTLNLQIEEVSDAKLVTPNELYQLITEENSTFAPLYDADDKPFKAHPYF 181
Query: 182 QLFNIISQRYKENTMERSL 200
+LF +++++ T + L
Sbjct: 182 KLFETLAEKFPTPTNKNLL 200
>TIGR_CMR|BA_1964 [details] [associations]
symbol:BA_1964 "mutT/nudix family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR000086 InterPro:IPR015797 PROSITE:PS51462 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 RefSeq:NP_844372.1
RefSeq:YP_018610.1 RefSeq:YP_028087.1 ProteinModelPortal:Q81RS4
DNASU:1083883 EnsemblBacteria:EBBACT00000011642
EnsemblBacteria:EBBACT00000015829 EnsemblBacteria:EBBACT00000024377
GeneID:1083883 GeneID:2817076 GeneID:2848236 KEGG:ban:BA_1964
KEGG:bar:GBAA_1964 KEGG:bat:BAS1823 HOGENOM:HOG000088253
OMA:IFKIDYE ProtClustDB:CLSK872891
BioCyc:BANT260799:GJAJ-1892-MONOMER
BioCyc:BANT261594:GJ7F-1967-MONOMER Uniprot:Q81RS4
Length = 202
Score = 175 (66.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR G++H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLP-- 131
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
F + EV V + + LL K+ SF V
Sbjct: 132 -FAPGE-EVDDVMKVHATSFLQLLKKEISSFTAISV 165
>UNIPROTKB|Q46822 [details] [associations]
symbol:idi species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0050992
"dimethylallyl diphosphate biosynthetic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=IDA] [GO:0004452 "isopentenyl-diphosphate
delta-isomerase activity" evidence=IEA;IDA] HAMAP:MF_00202
InterPro:IPR000086 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462 UniPathway:UPA00059
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0006974 GO:GO:0006744 GO:GO:0016787
EMBL:U28375 GO:GO:0008299 eggNOG:COG1443 KO:K01823 GO:GO:0004452
GO:GO:0050992 PANTHER:PTHR10885 TIGRFAMs:TIGR02150 EMBL:AF119715
PIR:A65073 RefSeq:NP_417365.1 RefSeq:YP_491090.1 PDB:1HX3 PDB:1HZT
PDB:1I9A PDB:1NFS PDB:1NFZ PDB:1OW2 PDB:1PPV PDB:1PPW PDB:1PVF
PDB:1Q54 PDB:1R67 PDB:1X83 PDB:1X84 PDB:2B2K PDB:2G73 PDB:2G74
PDB:2VNP PDB:2VNQ PDBsum:1HX3 PDBsum:1HZT PDBsum:1I9A PDBsum:1NFS
PDBsum:1NFZ PDBsum:1OW2 PDBsum:1PPV PDBsum:1PPW PDBsum:1PVF
PDBsum:1Q54 PDBsum:1R67 PDBsum:1X83 PDBsum:1X84 PDBsum:2B2K
PDBsum:2G73 PDBsum:2G74 PDBsum:2VNP PDBsum:2VNQ
ProteinModelPortal:Q46822 SMR:Q46822 IntAct:Q46822
EnsemblBacteria:EBESCT00000003483 EnsemblBacteria:EBESCT00000017993
GeneID:12930440 GeneID:949020 KEGG:ecj:Y75_p2821 KEGG:eco:b2889
PATRIC:32121188 EchoBASE:EB2883 EcoGene:EG13072
HOGENOM:HOG000274107 OMA:SKKTWPG ProtClustDB:PRK03759
BioCyc:EcoCyc:IPPISOM-MONOMER BioCyc:ECOL316407:JW2857-MONOMER
BioCyc:MetaCyc:IPPISOM-MONOMER SABIO-RK:Q46822
EvolutionaryTrace:Q46822 Genevestigator:Q46822 Uniprot:Q46822
Length = 182
Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/135 (27%), Positives = 62/135 (45%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSW 64
+Q EH+ +L G TG T + H H ++W+F Q LL+ RRA K +W
Sbjct: 1 MQTEHVILLNAQGVPTG-TLEKYAAHTADTRLHLAFSSWLFNAKGQ-LLVTRRALSKKAW 58
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNE 124
PG+W S GH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 59 PGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENE 116
Query: 125 FADVYLVTTLNPIPL 139
V+ T + + +
Sbjct: 117 VCPVFAARTTSALQI 131
>TIGR_CMR|CBU_0607 [details] [associations]
symbol:CBU_0607 "diphosphomevalonate decarboxylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004163
"diphosphomevalonate decarboxylase activity" evidence=ISS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
HAMAP:MF_00202 InterPro:IPR000086 InterPro:IPR005935
InterPro:IPR006204 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00288 Pfam:PF00293 PROSITE:PS51462 PANTHER:PTHR10977
GO:GO:0005524 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0008299
GO:GO:0004452 TIGRFAMs:TIGR02150 HSSP:Q46822 KO:K01597
GO:GO:0004163 TIGRFAMs:TIGR01240 OMA:NIALCKY RefSeq:NP_819637.1
ProteinModelPortal:Q83DT5 GeneID:1208492 KEGG:cbu:CBU_0607
PATRIC:17929901 HOGENOM:HOG000081924 ProtClustDB:CLSK914181
BioCyc:CBUR227377:GJ7S-605-MONOMER Uniprot:Q83DT5
Length = 503
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 51/172 (29%), Positives = 85/172 (49%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSW 64
+E+ + ++ ++ GI + + + HR G HR + +IF+ E LLLQ+R K
Sbjct: 331 REQRVVLVDENDRRLGIEE-KIKAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHS 389
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
G+W + H + + + +R L EE G+ +P K EF +T N + I N
Sbjct: 390 GGLWTNTCCSHPRPDEDIVTAGERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIEN 444
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS-FVPY 174
E+ V + T +A + E+SAV++I E KN L K++PS F P+
Sbjct: 445 EYDHVLIGFT----DADAIDFNKKEISAVRWIRVSELKNEL-KENPSHFTPW 491
>TIGR_CMR|SPO_0131 [details] [associations]
symbol:SPO_0131 "isopentyl-diphosphate delta-isomerase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity" evidence=ISS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
HAMAP:MF_00202 InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462
UniPathway:UPA00059 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0016787 GO:GO:0008299 eggNOG:COG1443
KO:K01823 GO:GO:0004452 GO:GO:0050992 PANTHER:PTHR10885
TIGRFAMs:TIGR02150 HOGENOM:HOG000274107 RefSeq:YP_165403.1
ProteinModelPortal:Q5LWT6 GeneID:3194796 KEGG:sil:SPO0131
PATRIC:23373507 OMA:PGLWTNT ProtClustDB:CLSK933164 Uniprot:Q5LWT6
Length = 180
Score = 127 (49.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 39/146 (26%), Positives = 65/146 (44%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
E H G H+ V+ +FA ++L+QRRA K PG+W + H +S+ A R
Sbjct: 20 EAHEKGLKHKAVS--VFAVRDMDILIQRRALGKYHTPGLWANTCCTHPDWDESASTCAVR 77
Query: 89 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148
L+EELGI + + + +G + NE DV+L P+ + E
Sbjct: 78 RLREELGITGLYPEYRHRLEYHAD--VGNG-MVENEVVDVFLAHVRGPLQVVP---NPDE 131
Query: 149 VSAVKYIAYEEYKNLLAKDDPSFVPY 174
V +++I Y + + + F P+
Sbjct: 132 VMEIRWIGYHDLLAEVQRYPERFTPW 157
>ASPGD|ASPL0000061206 [details] [associations]
symbol:AN0579 species:162425 "Emericella nidulans"
[GO:0016125 "sterol metabolic process" evidence=RCA] [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;RCA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462
EMBL:BN001308 Gene3D:3.90.79.10 SUPFAM:SSF55811 EMBL:AACD01000007
GO:GO:0016787 GO:GO:0008299 HOGENOM:HOG000274106 KO:K01823
GO:GO:0004452 PANTHER:PTHR10885 TIGRFAMs:TIGR02150 OMA:YILFLQK
RefSeq:XP_658183.1 ProteinModelPortal:G5EB72 SMR:G5EB72
EnsemblFungi:CADANIAT00002098 GeneID:2876355 KEGG:ani:AN0579.2
Uniprot:G5EB72
Length = 268
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 47/156 (30%), Positives = 78/156 (50%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI-----SAG---DSSLI- 84
G HR + ++F +S LLLQ+RA K ++P MW + H G D++++
Sbjct: 87 GLLHRAFSVFLF-DSQNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGSQLDAAILG 145
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L ELGI +P + FEF FT + +DGK+ +E D Y++ +
Sbjct: 146 VKRAAQRKLNHELGIKPEEVPIEKFEF-FTRIHYKAPSDGKWGEHEI-D-YILFIQADVV 202
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
LE EV +Y++ +E K + + + F P+
Sbjct: 203 LEP---NLNEVRDTRYVSADELKEMFKQTNLKFTPW 235
>TAIR|locus:2075412 [details] [associations]
symbol:IPP2 "isopentenyl pyrophosphate:dimethylallyl
pyrophosphate isomerase 2" species:3702 "Arabidopsis thaliana"
[GO:0004452 "isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;TAS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009908 "flower development" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009060 "aerobic respiration"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=TAS]
InterPro:IPR000086 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS00893 PROSITE:PS51462
UniPathway:UPA00059 UniPathway:UPA00668 GO:GO:0005829 GO:GO:0005739
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 GO:GO:0016114
GO:GO:0009908 GO:GO:0015979 EMBL:AC018363 GO:GO:0015995
eggNOG:COG1443 HOGENOM:HOG000274106 KO:K01823 ProtClustDB:PLN02552
GO:GO:0004452 GO:GO:0050992 PANTHER:PTHR10885 TIGRFAMs:TIGR02150
EMBL:U49259 EMBL:AF428343 EMBL:AY127023 EMBL:AY143845
IPI:IPI00516444 PIR:S71370 RefSeq:NP_186927.1 UniGene:At.10819
ProteinModelPortal:Q42553 SMR:Q42553 IntAct:Q42553 STRING:Q42553
PaxDb:Q42553 PRIDE:Q42553 DNASU:820960 EnsemblPlants:AT3G02780.1
GeneID:820960 KEGG:ath:AT3G02780 TAIR:At3g02780 InParanoid:Q42553
OMA:EERCILV PhylomeDB:Q42553 BioCyc:ARA:AT3G02780-MONOMER
BioCyc:MetaCyc:AT3G02780-MONOMER Genevestigator:Q42553
GermOnline:AT3G02780 Uniprot:Q42553
Length = 284
Score = 134 (52.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 46/144 (31%), Positives = 77/144 (53%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI---------SAQ 87
HR + ++F S ELLLQ+R++ K ++P +W + H +S LI +AQ
Sbjct: 104 HRAFSVFLF-NSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQ 162
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L +ELGI ++P D F + L + +DGK+ +E D YL+ + + ++
Sbjct: 163 RKLLDELGIVAEDVPVDEFTPLGRMLYK-APSDGKWGEHEL-D-YLLFIVRDVKVQP--- 216
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDD 168
EV+ +KY++ EE K L+ K D
Sbjct: 217 NPDEVAEIKYVSREELKELVKKAD 240
>POMBASE|SPBC106.15 [details] [associations]
symbol:idi1 "isopentenyl-diphosphate delta-isomerase
Idi1" species:4896 "Schizosaccharomyces pombe" [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006696 "ergosterol biosynthetic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR011876 InterPro:IPR015797 Pfam:PF00293
PIRSF:PIRSF018427 PROSITE:PS51462 UniPathway:UPA00059
PomBase:SPBC106.15 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
EMBL:CU329671 Gene3D:3.90.79.10 SUPFAM:SSF55811
GenomeReviews:CU329671_GR GO:GO:0016787 GO:GO:0006696 GO:GO:0008299
eggNOG:COG1443 HOGENOM:HOG000274106 GO:GO:0004452 GO:GO:0050992
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 EMBL:U21154 PIR:A56442
RefSeq:NP_595164.2 STRING:Q10132 EnsemblFungi:SPBC106.15.1
GeneID:2540174 OrthoDB:EOG4RFQ2V NextBio:20801306 Uniprot:Q10132
Length = 229
Score = 131 (51.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHIS--AGD--SSLI----- 84
G HR + +IF E + LLLQ+RA+ K ++P +W + H AG+ ++L
Sbjct: 51 GLLHRAFSMFIFDEQNR-LLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEG 109
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L ELGI +PKD F+F+ T + + G + +E D Y++ +
Sbjct: 110 VKNAAQRKLFHELGIQAKYIPKDKFQFL-TRIHYLAPSTGAWGEHEI-D-YILFFKGKVE 166
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + EV A KY+ EE K + + F P+
Sbjct: 167 LD---INPNEVQAYKYVTMEELKEMFSDPQYGFTPW 199
>TAIR|locus:2171382 [details] [associations]
symbol:IPP1 "isopentenyl diphosphate isomerase 1"
species:3702 "Arabidopsis thaliana" [GO:0004452
"isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;IDA;IMP] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;TAS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009240 "isopentenyl diphosphate
biosynthetic process" evidence=IMP] [GO:0009536 "plastid"
evidence=IDA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=TAS] InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS00893
PROSITE:PS51462 UniPathway:UPA00059 UniPathway:UPA00668
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0046872 Gene3D:3.90.79.10 SUPFAM:SSF55811 EMBL:AB005242
GO:GO:0016787 GO:GO:0016114 GO:GO:0015979 GO:GO:0015995
EMBL:AY065053 EMBL:AY093749 EMBL:U47324 EMBL:U48961 IPI:IPI00524120
PIR:S71369 RefSeq:NP_197148.3 UniGene:At.24823
ProteinModelPortal:Q38929 SMR:Q38929 STRING:Q38929 PaxDb:Q38929
PRIDE:Q38929 EnsemblPlants:AT5G16440.1 GeneID:831505
KEGG:ath:AT5G16440 TAIR:At5g16440 eggNOG:COG1443
HOGENOM:HOG000274106 InParanoid:Q38929 KO:K01823 OMA:DAQQVEY
ProtClustDB:PLN02552 BioCyc:ARA:AT5G16440-MONOMER
BioCyc:MetaCyc:AT5G16440-MONOMER Genevestigator:Q38929
GermOnline:AT5G16440 GO:GO:0004452 GO:GO:0050992 GO:GO:0009240
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 Uniprot:Q38929
Length = 291
Score = 134 (52.2 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 47/144 (32%), Positives = 76/144 (52%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI---------SAQ 87
HR + ++F S ELLLQ+R+ K ++P +W + H +S LI +AQ
Sbjct: 111 HRAFSVFLF-NSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQ 169
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L +ELGI ++P D F + L + +DGK+ +E D YL+ + + L+
Sbjct: 170 RKLFDELGIVAEDVPVDEFTPLGRMLYK-APSDGKWGEHE-VD-YLLFIVRDVKLQP--- 223
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDD 168
EV+ +KY++ EE K L+ K D
Sbjct: 224 NPDEVAEIKYVSREELKELVKKAD 247
>TAIR|locus:2058334 [details] [associations]
symbol:NUDT6 "nudix hydrolase homolog 6" species:3702
"Arabidopsis thaliana" [GO:0016787 "hydrolase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=RCA] [GO:0047631
"ADP-ribose diphosphatase activity" evidence=IDA] [GO:0051287 "NAD
binding" evidence=IDA] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0035529 "NADH pyrophosphatase activity"
evidence=IDA] [GO:0080151 "positive regulation of salicylic acid
mediated signaling pathway" evidence=IEP] [GO:0000165 "MAPK
cascade" evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010310
"regulation of hydrogen peroxide metabolic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043900 "regulation of multi-organism process"
evidence=RCA] [GO:0045088 "regulation of innate immune response"
evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051287 GO:GO:0046872
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051707 GO:GO:0047631
EMBL:AC006951 GO:GO:0035529 GO:GO:0000210 HOGENOM:HOG000240943
InterPro:IPR003293 PRINTS:PR01356 EMBL:CB185816 IPI:IPI00527960
PIR:G84457 RefSeq:NP_178526.1 UniGene:At.41308
ProteinModelPortal:Q9SJC4 SMR:Q9SJC4 STRING:Q9SJC4 DNASU:814985
EnsemblPlants:AT2G04450.1 GeneID:814985 KEGG:ath:AT2G04450
TAIR:At2g04450 eggNOG:NOG282759 InParanoid:Q9SJC4 OMA:FMANICL
PhylomeDB:Q9SJC4 ProtClustDB:CLSN2683982
BioCyc:MetaCyc:AT2G04450-MONOMER Genevestigator:Q9SJC4
GermOnline:AT2G04450 GO:GO:0080151 Uniprot:Q9SJC4
Length = 283
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T P + HR+G V A++ + T+E+L+ + D G+W + + G + G++
Sbjct: 95 TLPANASHRIG-----VGAFVLNKKTKEVLVVQEIDGHFKGTGVWKLPT-GVVKEGENIW 148
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFT 143
A RE++EE GI K F V F + + F+ + D++ + L P E
Sbjct: 149 EGALREVEEETGI---KTKFVEVLAFRESHQA----FLEIK-TDIFFLCELEPTTFE-IK 199
Query: 144 LQQTEVSAVKYIAYEEYKN 162
Q +E+ A K++ EEY N
Sbjct: 200 KQDSEILAAKWMPIEEYVN 218
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 569 KNILRPIADVCIRKEQQ-ELVDFDSFFT 595
K + R +A++C+++ Q+ E + F T
Sbjct: 225 KELFRFMANICLKRLQEMEYMGFSKVLT 252
>UNIPROTKB|Q13907 [details] [associations]
symbol:IDI1 "Isopentenyl-diphosphate Delta-isomerase 1"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0004452 "isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA;IDA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0035634 "response to stilbenoid" evidence=IEA] [GO:0050992
"dimethylallyl diphosphate biosynthetic process" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006695
"cholesterol biosynthetic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000086 InterPro:IPR011876 InterPro:IPR015797
Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462 UniPathway:UPA00059
GO:GO:0005829 GO:GO:0005739 GO:GO:0005777 GO:GO:0035634
GO:GO:0000287 GO:GO:0046872 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0006695 GO:GO:0016787 EMBL:CH471072 GO:GO:0030145
GO:GO:0008299 eggNOG:COG1443 KO:K01823 GO:GO:0004452 GO:GO:0050992
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 CTD:3422 HOVERGEN:HBG002995
OrthoDB:EOG4PK28T EMBL:X17025 EMBL:AF291755 EMBL:AF271720
EMBL:AF271724 EMBL:AF271721 EMBL:AF271722 EMBL:AF271723
EMBL:BT006761 EMBL:AK303669 EMBL:AC022536 EMBL:BC005247
EMBL:BC006999 EMBL:BC019227 EMBL:BC022418 EMBL:BC025375
EMBL:BC057827 EMBL:BC107893 EMBL:AK222875 IPI:IPI00220014
IPI:IPI00645307 RefSeq:NP_004499.2 UniGene:Hs.741176 PDB:2DHO
PDB:2I6K PDB:2ICJ PDB:2ICK PDBsum:2DHO PDBsum:2I6K PDBsum:2ICJ
PDBsum:2ICK ProteinModelPortal:Q13907 SMR:Q13907 IntAct:Q13907
STRING:Q13907 PhosphoSite:Q13907 DMDM:6225527 PaxDb:Q13907
PRIDE:Q13907 DNASU:3422 Ensembl:ENST00000381344 GeneID:3422
KEGG:hsa:3422 UCSC:uc001ifz.3 GeneCards:GC10M001075
H-InvDB:HIX0008588 HGNC:HGNC:5387 HPA:HPA039169 MIM:604055
neXtProt:NX_Q13907 PharmGKB:PA29635 InParanoid:Q13907 OMA:YILFLQK
BioCyc:MetaCyc:HS00895-MONOMER BRENDA:5.3.3.2 SABIO-RK:Q13907
EvolutionaryTrace:Q13907 GenomeRNAi:3422 NextBio:13496
ArrayExpress:Q13907 Bgee:Q13907 CleanEx:HS_IDI1
Genevestigator:Q13907 GermOnline:ENSG00000067064 Uniprot:Q13907
Length = 227
Score = 115 (45.5 bits), Expect = 0.00064, P = 0.00064
Identities = 44/148 (29%), Positives = 73/148 (49%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-------ISSAGHISAGDSSLI-- 84
G HR + ++F + +LLLQ+R+D K ++PG + +S+ + D+ +
Sbjct: 48 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRR 106
Query: 85 SAQRELQEELGINL---PKDAFEFVFTFLQQNVINDGKFINNEFADVYLV---TTLNPIP 138
+AQR L+ ELGI L P + ++ T + +DG + +E + LV TLNP P
Sbjct: 107 AAQRRLKAELGIPLEEVPPEEINYL-TRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDP 165
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAK 166
E+ + Y++ EE K LL K
Sbjct: 166 --------NEIKSYCYVSKEELKELLKK 185
>UNIPROTKB|I3LDY2 [details] [associations]
symbol:LOC100739304 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004452 "isopentenyl-diphosphate delta-isomerase activity"
evidence=IEA] InterPro:IPR000086 InterPro:IPR011876
InterPro:IPR015797 Pfam:PF00293 PIRSF:PIRSF018427 PROSITE:PS51462
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787 GO:GO:0008299
GO:GO:0004452 PANTHER:PTHR10885 TIGRFAMs:TIGR02150
GeneTree:ENSGT00390000008527 OMA:YILFLQK EMBL:FP340182
EMBL:FP565895 Ensembl:ENSSSCT00000024912 Ensembl:ENSSSCT00000025266
Uniprot:I3LDY2
Length = 287
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 44/148 (29%), Positives = 74/148 (50%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-------ISSAGHISAGDSSLI-- 84
G HR + ++F + +LLLQ+R+D K ++PG + +S+ G + D+ +
Sbjct: 108 GLLHRAFSVFLF-NTENKLLLQQRSDAKITFPGCFSNACCSHPLSTPGELEENDAIGVRR 166
Query: 85 SAQRELQEELGINL---PKDAFEFVFTFLQQNVINDGKFINNEFADVYLV---TTLNPIP 138
+AQR L+ ELGI L P + ++ T + +DG + +E + L+ TLNP P
Sbjct: 167 AAQRRLKAELGIPLEEVPPEEINYL-TRIYYKAQSDGIWGEHEIDYILLMKKDVTLNPDP 225
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAK 166
E+ + Y++ EE K LL K
Sbjct: 226 --------NEIKSHCYVSQEELKELLRK 245
>UNIPROTKB|G4MT46 [details] [associations]
symbol:MGG_07125 "Isopentenyl-diphosphate Delta-isomerase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000086
InterPro:IPR011876 InterPro:IPR015797 Pfam:PF00293
PIRSF:PIRSF018427 PROSITE:PS51462 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CM001232 GO:GO:0008299 KO:K01823 GO:GO:0004452
PANTHER:PTHR10885 TIGRFAMs:TIGR02150 RefSeq:XP_003715318.1
ProteinModelPortal:G4MT46 SMR:G4MT46 EnsemblFungi:MGG_07125T0
GeneID:2683247 KEGG:mgr:MGG_07125 Uniprot:G4MT46
Length = 254
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA--GDS------SLI- 84
G HR + ++F + ELLLQ+RA K ++P MW + H G++ S++
Sbjct: 73 GLLHRAFSVFLFNDKN-ELLLQQRATEKITFPDMWTNTCCSHPLGIPGETGSNLPDSIMG 131
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L ELGI +P + F F+ T + +DGK+ +E D L N +
Sbjct: 132 VKRAAQRKLDHELGIKKEQVPLENFHFL-TRIHYKAPSDGKWGEHE-VDYILFIKAN-VD 188
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + + EV A +Y + + K F P+
Sbjct: 189 LD---INKNEVQATQYTSADGLKAFFKDPAAKFTPW 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 779 779 0.00094 121 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 628 (67 KB)
Total size of DFA: 394 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 68.39u 0.07s 68.46t Elapsed: 00:00:09
Total cpu time: 68.39u 0.07s 68.46t Elapsed: 00:00:09
Start: Fri May 10 17:26:30 2013 End: Fri May 10 17:26:39 2013