BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004012
(779 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225443237|ref|XP_002271902.1| PREDICTED: nudix hydrolase 3-like [Vitis vinifera]
Length = 782
Score = 1315 bits (3404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/778 (79%), Positives = 702/778 (90%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MAE ++ EEH DVLT TGQ+TG++KPR +VHR GDYH V+ WIF+ESTQELLLQRRAD
Sbjct: 1 MAEPLLHEEHFDVLTKTGQRTGLSKPRGDVHRDGDYHAAVHVWIFSESTQELLLQRRADC 60
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
KDSWPG+WDISSAGHISAGDSSLI+A+REL EELG+ LPKDAFEF+F FLQ+ VINDGKF
Sbjct: 61 KDSWPGLWDISSAGHISAGDSSLITARRELHEELGVILPKDAFEFLFVFLQECVINDGKF 120
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGY 180
INNEF DVYLVTTL PIPLEAFTLQ++EVSAVKYI+ EEYK LLAK+DP +VPYDVNG Y
Sbjct: 121 INNEFNDVYLVTTLAPIPLEAFTLQESEVSAVKYISCEEYKRLLAKEDPEYVPYDVNGKY 180
Query: 181 GQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMD 240
GQLF+II+QRYKEN ERSLTLQKQLRRY +SL AE+ G++DADK+ALVL+++AAT++D
Sbjct: 181 GQLFDIIAQRYKENMEERSLTLQKQLRRYVPISLEAEMTGVTDADKKALVLLVQAATIID 240
Query: 241 EIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVK 300
+IF LQVWYSNP+L+DWLKEHAD S LDKLKWMYYLINKSPWS LDEN+AFLTTADSAVK
Sbjct: 241 DIFNLQVWYSNPILKDWLKEHADTSHLDKLKWMYYLINKSPWSCLDENKAFLTTADSAVK 300
Query: 301 LLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF 360
LLP+ATK + GWKGLEY+A+FPL KPPGANFYPPDMDKMEFELWK SL + +QEDAT FF
Sbjct: 301 LLPEATKSITGWKGLEYRAAFPLMKPPGANFYPPDMDKMEFELWKGSLAKDKQEDATGFF 360
Query: 361 TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA 420
+VI+R EF LD+SLS + V+ T+ VGS +DLYS+P+S+EY +L +A+ELLHKAGD+
Sbjct: 361 SVIRRHGEFMLDASLSNNTVEGTDDLVGSTHDLYSIPFSQEYKPFLKKAAELLHKAGDLT 420
Query: 421 SSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFI 480
SPSLKRLLHSKADAFLSN Y DSDIAW+ELDS+LDVTIGPYETYED +FGYKATFEAFI
Sbjct: 421 DSPSLKRLLHSKADAFLSNEYIDSDIAWMELDSKLDVTIGPYETYEDTLFGYKATFEAFI 480
Query: 481 GIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVA 540
G+RDD ATAQ+KLFGDNLQVLEQNLPMD+ YKSK+VIAAPIRVIQL+YN+GDVKGPQTVA
Sbjct: 481 GVRDDHATAQLKLFGDNLQVLEQNLPMDDVYKSKEVIAAPIRVIQLVYNAGDVKGPQTVA 540
Query: 541 FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICH 600
FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIA+ CI KEQQ+ VDF+SFFTH ICH
Sbjct: 541 FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAEACITKEQQKYVDFESFFTHTICH 600
Query: 601 ECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK 660
ECCHGIGPH+I LP+G++STVRLELQELHS++EEAKADIVGLWAL+FLIG+DLL KSL+K
Sbjct: 601 ECCHGIGPHTIILPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLIGQDLLSKSLLK 660
Query: 661 SMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVES 720
SMYVSFLAGCFRSVRFGLEE+HGKGQALQFNW+FEK FILH D+TFSVDF K+EGAVES
Sbjct: 661 SMYVSFLAGCFRSVRFGLEEAHGKGQALQFNWVFEKGGFILHPDETFSVDFAKIEGAVES 720
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
LS EILTIQA+GDK AA LL+KY MTQPL+VAL+KLEN+QVPVDIAP F +K+L
Sbjct: 721 LSREILTIQAKGDKPAAYALLEKYAKMTQPLRVALEKLENIQVPVDIAPRFPIADKIL 778
>gi|224108599|ref|XP_002333368.1| predicted protein [Populus trichocarpa]
gi|222836350|gb|EEE74757.1| predicted protein [Populus trichocarpa]
Length = 752
Score = 1286 bits (3329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/753 (81%), Positives = 686/753 (91%), Gaps = 1/753 (0%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
K R EVHR GDYHR V+ WI++ESTQELLLQRRAD KDSWPG WDISSAGHISAGDSSL+
Sbjct: 1 KFRGEVHRDGDYHRAVHVWIYSESTQELLLQRRADCKDSWPGQWDISSAGHISAGDSSLV 60
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
SAQRELQEELGI+LPKDAFE +F +LQ+ VINDGKFINNEF DVYLVTT++PIPLEAFTL
Sbjct: 61 SAQRELQEELGISLPKDAFELIFIYLQECVINDGKFINNEFNDVYLVTTVDPIPLEAFTL 120
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQK 204
Q+TEVSAVKYI++EEY++LL K+DP +VPYDV+ YGQLF II +RY ENT+ RSL+LQK
Sbjct: 121 QETEVSAVKYISFEEYRSLLVKEDPDYVPYDVDEQYGQLFEIIRKRYTENTVARSLSLQK 180
Query: 205 QLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA 264
QL RYA VSL+AEL GLS+ D++ L L+IKAA +MDEIFYLQVWYSNP LRDWLKEHA A
Sbjct: 181 QLCRYASVSLDAELTGLSNTDRKTLGLLIKAAKLMDEIFYLQVWYSNPALRDWLKEHASA 240
Query: 265 SELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLP 324
SELDKLKWMYY INKSPWS LDENEAFLTT DSA+KLLP+ATKPV+GWKGLEYKA+FP+
Sbjct: 241 SELDKLKWMYYSINKSPWSCLDENEAFLTTTDSAIKLLPEATKPVSGWKGLEYKAAFPML 300
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
KPPGANFYPPDMDK EF+LW SLTEK+Q DA FFTVIKR SEF+LDSS H V TN
Sbjct: 301 KPPGANFYPPDMDKKEFKLWNDSLTEKEQNDAMGFFTVIKRHSEFSLDSSSPNHAVHGTN 360
Query: 385 HSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDS 444
H + + +DLYSVPYS+EYNS+L +A+ELLH+AGD+A SPSLKRLLHSKADAFLSN+YY+S
Sbjct: 361 H-LMTAHDLYSVPYSKEYNSFLRKAAELLHEAGDLAGSPSLKRLLHSKADAFLSNDYYES 419
Query: 445 DIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
DIAW+ELDS+LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ+KLFGDNLQ LEQN
Sbjct: 420 DIAWMELDSKLDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQLKLFGDNLQFLEQN 479
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
LPMD+AYKSK+V AAPIRVI+L+YN+GDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS
Sbjct: 480 LPMDSAYKSKNVNAAPIRVIRLLYNAGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 539
Query: 565 EAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLE 624
EAKFK+IL+PIADVCI KEQ+ LVDF+SFFTH ICHECCHGIGPH+ITLPDG++STVR E
Sbjct: 540 EAKFKHILQPIADVCISKEQKGLVDFESFFTHTICHECCHGIGPHTITLPDGQKSTVRKE 599
Query: 625 LQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGK 684
LQELHSA+EEAKADIVGLWALKFLI +DLLP+S+VKSMYVSFLAGCFRSVRFGLEE+HGK
Sbjct: 600 LQELHSALEEAKADIVGLWALKFLINQDLLPRSMVKSMYVSFLAGCFRSVRFGLEEAHGK 659
Query: 685 GQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
GQALQFNW++EKEAFILH D+TFSVDF KVE AVESLS EILTIQA+GDKEAA LLLQKY
Sbjct: 660 GQALQFNWMYEKEAFILHPDETFSVDFAKVEEAVESLSREILTIQAKGDKEAADLLLQKY 719
Query: 745 CTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
C MT+PLK AL+KLE+VQVPVDI P F+ VN++
Sbjct: 720 CKMTRPLKHALEKLESVQVPVDIYPIFSTVNEI 752
>gi|298204759|emb|CBI25257.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 1285 bits (3326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/778 (77%), Positives = 688/778 (88%), Gaps = 20/778 (2%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MAE ++ EEH DVLT TGQ+TG++KPR +VHR GDYH V+ WIF+ESTQELLLQRRAD
Sbjct: 4 MAEPLLHEEHFDVLTKTGQRTGLSKPRGDVHRDGDYHAAVHVWIFSESTQELLLQRRADC 63
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
KDSWPG+WDISSAGHISAGDSSLI+A+REL EELG+ LPKDAFEF+F FLQ+ VINDGKF
Sbjct: 64 KDSWPGLWDISSAGHISAGDSSLITARRELHEELGVILPKDAFEFLFVFLQECVINDGKF 123
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGY 180
INNEF DVYLVTTL PIPLEAFTLQ++EVSAVKYI+ EEYK LLAK+DP +VPYDVNG Y
Sbjct: 124 INNEFNDVYLVTTLAPIPLEAFTLQESEVSAVKYISCEEYKRLLAKEDPEYVPYDVNGKY 183
Query: 181 GQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMD 240
GQLF+II+QRYKEN ERSLTLQKQLRRY +SL AE+ G++DADK+ALVL+++AAT++D
Sbjct: 184 GQLFDIIAQRYKENMEERSLTLQKQLRRYVPISLEAEMTGVTDADKKALVLLVQAATIID 243
Query: 241 EIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVK 300
+IF LQVWYSNP+L+DWLKEHAD S LDKLKWMYYLINKSPWS LDEN+AFLTTADSAVK
Sbjct: 244 DIFNLQVWYSNPILKDWLKEHADTSHLDKLKWMYYLINKSPWSCLDENKAFLTTADSAVK 303
Query: 301 LLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF 360
LLP+ATK + GWKGLEY+A+FPL KPPGANFYPPDMDKMEFELWK SL + +QEDAT FF
Sbjct: 304 LLPEATKSITGWKGLEYRAAFPLMKPPGANFYPPDMDKMEFELWKGSLAKDKQEDATGFF 363
Query: 361 TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA 420
+VI+R EF LD+SL +P+S+EY +L +A+ELLHKAGD+
Sbjct: 364 SVIRRHGEFMLDASL--------------------IPFSQEYKPFLKKAAELLHKAGDLT 403
Query: 421 SSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFI 480
SPSLKRLLHSKADAFLSN Y DSDIAW+ELDS+LDVTIGPYETYED +FGYKATFEAFI
Sbjct: 404 DSPSLKRLLHSKADAFLSNEYIDSDIAWMELDSKLDVTIGPYETYEDTLFGYKATFEAFI 463
Query: 481 GIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVA 540
G+RDD ATAQ+KLFGDNLQVLEQNLPMD+ YKSK+VIAAPIRVIQL+YN+GDVKGPQTVA
Sbjct: 464 GVRDDHATAQLKLFGDNLQVLEQNLPMDDVYKSKEVIAAPIRVIQLVYNAGDVKGPQTVA 523
Query: 541 FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICH 600
FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIA+ CI KEQQ+ VDF+SFFTH ICH
Sbjct: 524 FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAEACITKEQQKYVDFESFFTHTICH 583
Query: 601 ECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK 660
ECCHGIGPH+I LP+G++STVRLELQELHS++EEAKADIVGLWAL+FLIG+DLL KSL+K
Sbjct: 584 ECCHGIGPHTIILPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLIGQDLLSKSLLK 643
Query: 661 SMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVES 720
SMYVSFLAGCFRSVRFGLEE+HGKGQALQFNW+FEK FILH D+TFSVDF K+EGAVES
Sbjct: 644 SMYVSFLAGCFRSVRFGLEEAHGKGQALQFNWVFEKGGFILHPDETFSVDFAKIEGAVES 703
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
LS EILTIQA+GDK AA LL+KY MTQPL+VAL+KLEN+QVPVDIAP F +K+L
Sbjct: 704 LSREILTIQAKGDKPAAYALLEKYAKMTQPLRVALEKLENIQVPVDIAPRFPIADKIL 761
>gi|356549922|ref|XP_003543339.1| PREDICTED: nudix hydrolase 3-like [Glycine max]
Length = 768
Score = 1246 bits (3224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/772 (76%), Positives = 679/772 (87%), Gaps = 8/772 (1%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EEHLDVLT TG KTG++KPR +VHR GDYHR V+ WIFAEST+ELLLQRRA KDSWP +
Sbjct: 5 EEHLDVLTKTGLKTGVSKPRGDVHRDGDYHRAVHVWIFAESTRELLLQRRASCKDSWPDL 64
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGDSSL SA+REL+EELGI LPKDAFE +F FLQ+ VINDGK+INNE+ D
Sbjct: 65 WDISSAGHISAGDSSLTSARRELEEELGITLPKDAFELIFVFLQECVINDGKYINNEYND 124
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL+PIPLEAF LQ+TEVSAVKYI+YEEYK LLAK+D +VPYDVNG YGQLF+II
Sbjct: 125 VYLVTTLDPIPLEAFVLQETEVSAVKYISYEEYKRLLAKEDSGYVPYDVNGQYGQLFDII 184
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYKENT+ RSLTLQKQ+ RYA +SL+AEL GL+D+DKEALV V+KAA VMDEIFYLQ
Sbjct: 185 EKRYKENTVARSLTLQKQISRYAPISLSAELTGLTDSDKEALVFVVKAANVMDEIFYLQA 244
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
WYSNP LRDWLKEHAD SE +KLKW YY INKSPWSSLDE+EAFL+TADSA++LL AT+
Sbjct: 245 WYSNPSLRDWLKEHADTSEFNKLKWSYYQINKSPWSSLDEDEAFLSTADSAIRLLSKATR 304
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
V WKGLEY+A+FPL KP GANFYPPDMDKMEFELWK SL + +Q++AT FF+VIKR S
Sbjct: 305 IVKDWKGLEYRAAFPLLKPAGANFYPPDMDKMEFELWKDSLEKHEQKEATGFFSVIKRHS 364
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
EF LDS LS ++ GS +DLY VPYSEEY S L +AS+LLHKAGD++ SP LKR
Sbjct: 365 EFILDSHLS-------DNKTGS-HDLYIVPYSEEYKSLLAKASDLLHKAGDISDSPGLKR 416
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LLHSKADAFLSN+YYDSDIAW+ELDS+LDVTIGPYETYED +FGYKATFEA+IGIRDD+A
Sbjct: 417 LLHSKADAFLSNDYYDSDIAWMELDSKLDVTIGPYETYEDKLFGYKATFEAYIGIRDDEA 476
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
TAQ+KLFGDNL +LEQNLPMD+AYKS+DV AAPIRVIQL+YN+GDVKGPQT+AFNLPNDE
Sbjct: 477 TAQLKLFGDNLLLLEQNLPMDSAYKSEDVNAAPIRVIQLLYNAGDVKGPQTLAFNLPNDE 536
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIVKDRG+SMVMLKNVSEAKFK+IL PIA C+ +QQE VDF+SFFTH ICHECCHGIG
Sbjct: 537 RIVKDRGSSMVMLKNVSEAKFKHILLPIAAACVANDQQEHVDFESFFTHTICHECCHGIG 596
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PH+ITLP+G++STVRLELQE +SA+EEAKADIVGLWAL+FLI +DLL +SL+KSMYVSFL
Sbjct: 597 PHTITLPNGQKSTVRLELQEFYSALEEAKADIVGLWALRFLISQDLLSESLLKSMYVSFL 656
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRSVRFGLEE+HGKGQALQFNWL+EK AF+ S+ SVDF K+EGAVESLS EILT
Sbjct: 657 AGCFRSVRFGLEEAHGKGQALQFNWLYEKGAFVWDSEGKVSVDFTKIEGAVESLSREILT 716
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
IQA GDKE A LLL KYC +T+PLKVAL+ LE++QVPVD+APTF NK+LQ
Sbjct: 717 IQANGDKETAGLLLLKYCVLTEPLKVALKNLEDIQVPVDVAPTFPIGNKILQ 768
>gi|449436201|ref|XP_004135882.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus]
Length = 786
Score = 1235 bits (3196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/779 (75%), Positives = 673/779 (86%), Gaps = 1/779 (0%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MAE QEEH DVLT TG+KTG +K R +VHR GDYHR V+ WIFAESTQELLLQ RAD
Sbjct: 1 MAEPRKQEEHFDVLTKTGEKTGFSKSRCDVHRDGDYHRAVHVWIFAESTQELLLQLRADC 60
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
KDSWPG+WDISSAGHISAGDSSL +A+RELQEELG+ LPK+AFE +F FL + N G+F
Sbjct: 61 KDSWPGLWDISSAGHISAGDSSLETARRELQEELGVILPKEAFELIFVFLNETSTNGGQF 120
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGG- 179
INNEF DVYLVTTL+PIPLEAFTLQ++EVSAVKYI Y +YKNLLA +DP +VPYDVN
Sbjct: 121 INNEFEDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLDYKNLLANEDPEYVPYDVNAQQ 180
Query: 180 YGQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVM 239
YGQLF+II+QRYK + + RS TLQKQL+RYA VSLN EL GLSDADK AL L+IKAA +M
Sbjct: 181 YGQLFDIIAQRYKVDNVARSSTLQKQLQRYASVSLNVELTGLSDADKGALDLLIKAAAIM 240
Query: 240 DEIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAV 299
DEIF LQVWYSNP L+DWL++HA AS+LDKLKW YYLINK+PWS LDENEA+LTTADSA+
Sbjct: 241 DEIFNLQVWYSNPYLKDWLEKHAAASQLDKLKWAYYLINKTPWSCLDENEAYLTTADSAI 300
Query: 300 KLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSF 359
KLLP+AT+ V+GWKGLEYKA+FP KPPGANFYPPDMDKMEF WK SL E QQ F
Sbjct: 301 KLLPEATRRVSGWKGLEYKAAFPSQKPPGANFYPPDMDKMEFTQWKDSLPEDQQNIVAGF 360
Query: 360 FTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDM 419
F+VIKR SE N D S+ +TNH GS +DLY+VP+S+EYNS+L++A+ELLHKAGD
Sbjct: 361 FSVIKRHSESNSDLSIDSRSPGSTNHLEGSKHDLYNVPFSQEYNSFLSKAAELLHKAGDR 420
Query: 420 ASSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAF 479
SSPSL+RLLHSKADAFLSN+YY+SDIAW+ELDS+LDVTIGPYETYED +FGYKATFEAF
Sbjct: 421 TSSPSLRRLLHSKADAFLSNDYYESDIAWMELDSKLDVTIGPYETYEDTLFGYKATFEAF 480
Query: 480 IGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTV 539
IGIRDDK T QVK FGDNLQVLEQNLPMDNAYKSKDV AAPIRV+QL+YN+GDVKGPQTV
Sbjct: 481 IGIRDDKGTTQVKFFGDNLQVLEQNLPMDNAYKSKDVSAAPIRVVQLLYNAGDVKGPQTV 540
Query: 540 AFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNIC 599
AFNLPNDERIVKDRGTSMVMLKNVSEAKFK+IL+PIA+ CI EQ+E VDFDS+FTH IC
Sbjct: 541 AFNLPNDERIVKDRGTSMVMLKNVSEAKFKHILQPIANACITNEQREFVDFDSYFTHVIC 600
Query: 600 HECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV 659
HECCHGIGPH+ITLP+G+ STVRLELQELHSA+EEAKADIVGLWAL+FL + LLP + +
Sbjct: 601 HECCHGIGPHTITLPNGKTSTVRLELQELHSALEEAKADIVGLWALRFLTLQGLLPGASL 660
Query: 660 KSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVE 719
KS+Y +FL GCFRSVRFGL E+HGKGQALQFNWLFEKEAF+L+ D+TFSV+FDKVE AVE
Sbjct: 661 KSVYATFLVGCFRSVRFGLLEAHGKGQALQFNWLFEKEAFVLNPDETFSVNFDKVEDAVE 720
Query: 720 SLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
SLS EILTIQARGDKE+A LLLQKY M++PLK+AL LE +QVPVDIAP F ++L
Sbjct: 721 SLSREILTIQARGDKESAKLLLQKYGVMSEPLKLALNNLERIQVPVDIAPEFPVAKEIL 779
>gi|18412472|ref|NP_565218.1| nudix hydrolase 3 [Arabidopsis thaliana]
gi|68565909|sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3
gi|21539559|gb|AAM53332.1| unknown protein [Arabidopsis thaliana]
gi|23197868|gb|AAN15461.1| unknown protein [Arabidopsis thaliana]
gi|332198166|gb|AEE36287.1| nudix hydrolase 3 [Arabidopsis thaliana]
Length = 772
Score = 1207 bits (3122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/773 (73%), Positives = 667/773 (86%), Gaps = 2/773 (0%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ EEH DVLT +G+KTG++KPR EVHR GDYHR V+ WIF E+TQ+LLLQ R+D KDSWP
Sbjct: 1 MAEEHFDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWP 60
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G WDISSAGHISAGD+SL+SAQREL+EELG+ LPKDAFE +F FLQ+ V NDGKFINNEF
Sbjct: 61 GQWDISSAGHISAGDTSLLSAQRELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEF 120
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFN 185
DVYLVT L+PIPLEAFTLQ+ EVSAVKY+ YEEY+N L+K+DP++VPYDVNG YG+LF+
Sbjct: 121 NDVYLVTILHPIPLEAFTLQKEEVSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFD 180
Query: 186 IISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYL 245
II QR + NT RSL+LQKQL+RY+ V+L A+L LS+AD++AL L++KAA +MD+IFY
Sbjct: 181 IIRQRCQVNTEARSLSLQKQLQRYSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYE 240
Query: 246 QVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDA 305
QVW SNP LRDWLK+HA+AS+LDKLKW Y+ INKSPWSSLDENEAFL+TADSAVKLLP A
Sbjct: 241 QVWNSNPALRDWLKDHANASKLDKLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGA 300
Query: 306 TKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKR 365
TK + GWKGLEY+A+FP+ KPPGANFYPPDMDKMEF LW + LTE+Q+ AT FF+VIKR
Sbjct: 301 TKAIAGWKGLEYRAAFPVTKPPGANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKR 360
Query: 366 RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSL 425
RSE NLD+S H+ +T S DLYS+PYSE Y +L +ASE L KAGD+ SSPSL
Sbjct: 361 RSEANLDAS--DHLASSTKKLPDSNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSPSL 418
Query: 426 KRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDD 485
K+LLHSKA+AFLSN YY+SDIAW++LDS+LD+TIGPYETYED IFGYKATFE FIGIRDD
Sbjct: 419 KKLLHSKAEAFLSNEYYESDIAWMDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDD 478
Query: 486 KATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPN 545
KATA +KLFGDNL++LE NLP+++ YKS DV AAPIRVIQLIYNSGDVKGPQTVA+NLPN
Sbjct: 479 KATADLKLFGDNLKLLEDNLPLESVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPN 538
Query: 546 DERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHG 605
DE+IVKDRGTSMVMLKNV EAKF++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHG
Sbjct: 539 DEKIVKDRGTSMVMLKNVQEAKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHG 598
Query: 606 IGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVS 665
IGPH+ITLP G+ STVR ELQE+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVS
Sbjct: 599 IGPHTITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVS 658
Query: 666 FLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEI 725
FLAGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EI
Sbjct: 659 FLAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEI 718
Query: 726 LTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
LTIQ +GDK AA+LLL KYCT+T PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 719 LTIQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 771
>gi|449436199|ref|XP_004135881.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus]
Length = 783
Score = 1202 bits (3109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/778 (73%), Positives = 670/778 (86%), Gaps = 2/778 (0%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MA+ QEE+ DVLT TG+KTG++KPR +VHR GDYHR V+ IFAESTQELLLQ+RAD
Sbjct: 1 MAKPHTQEEYFDVLTKTGEKTGVSKPRGDVHRDGDYHRAVHVCIFAESTQELLLQQRADC 60
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
KDSWPG+WDISSAGHISAGDSSL +A++EL+EELGI LPKDAFE +F FLQ+ + N G+F
Sbjct: 61 KDSWPGLWDISSAGHISAGDSSLATARKELREELGIILPKDAFELIFVFLQETITNGGQF 120
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGY 180
I+NEFADVYLVTTLNPIP EAFTLQ++EVSAVKY+ Y E+K+LLA DP + PYDVN Y
Sbjct: 121 IDNEFADVYLVTTLNPIPFEAFTLQESEVSAVKYVHYLEFKSLLASKDPEYFPYDVNAQY 180
Query: 181 GQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMD 240
GQLF+II++RYK + + RSL LQKQL+RYA +SLN ELAGL+DADK AL L+I AA +D
Sbjct: 181 GQLFDIIAKRYKVDNVARSLALQKQLQRYASISLNVELAGLTDADKGALDLIINAAATID 240
Query: 241 EIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVK 300
EIFYLQ+WYSNP LRDWL++HA S LDKLK YYLINK+PWSSLDENEA+LTTADSA+K
Sbjct: 241 EIFYLQIWYSNPCLRDWLEKHATTSHLDKLKRAYYLINKTPWSSLDENEAYLTTADSAIK 300
Query: 301 LLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF 360
LLP+AT+PV+GWKGLEYKA+FPL KPPGANFYPPDMDKMEF+ WK SLTE QQ + FF
Sbjct: 301 LLPEATRPVSGWKGLEYKAAFPLQKPPGANFYPPDMDKMEFKQWKDSLTEDQQNIVSGFF 360
Query: 361 TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA 420
+VI RR + +D+TN G DLY+VP+S+EY+S+L++A+ELLHKAGD+
Sbjct: 361 SVI-RRYSDSSSDLSICSSLDSTNRLEGPTNDLYNVPFSQEYSSFLSKAAELLHKAGDIT 419
Query: 421 SSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFI 480
SSPSLKR LHS+ADAFLSN+YY+SDIAW+ELDS+LDVTIGPYETYED +FGYKATFEAFI
Sbjct: 420 SSPSLKRFLHSRADAFLSNDYYESDIAWMELDSKLDVTIGPYETYEDTLFGYKATFEAFI 479
Query: 481 GIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVA 540
GIRDDK TAQVKLFGDNLQVLEQNLPMDNAYKSKDV AAPIRV+QL+YN+G VKG Q+VA
Sbjct: 480 GIRDDKGTAQVKLFGDNLQVLEQNLPMDNAYKSKDVSAAPIRVVQLLYNAG-VKGTQSVA 538
Query: 541 FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICH 600
FNLPNDERIVK+RGTSMVMLKNVSEAKF IL+PIADVCI EQ+E VDFDSFFT ICH
Sbjct: 539 FNLPNDERIVKERGTSMVMLKNVSEAKFNLILKPIADVCIANEQREFVDFDSFFTFAICH 598
Query: 601 ECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK 660
ECCHGIGPH+ITLP+G++STVRLELQELHSA+EEAKADIVGLWAL+FL + LLP + +K
Sbjct: 599 ECCHGIGPHTITLPNGKKSTVRLELQELHSALEEAKADIVGLWALRFLALQGLLPGASLK 658
Query: 661 SMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVES 720
S+Y +FLAGCFRSVRFGL ++HGKGQALQFNWLFEKEAF+L+ D+TFSV+FDKVE AVES
Sbjct: 659 SVYATFLAGCFRSVRFGLSKAHGKGQALQFNWLFEKEAFVLNPDETFSVNFDKVEDAVES 718
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
LS E+LTIQARGDK++A L L+KY +++PLK+AL LE +QVPVD+A F ++L
Sbjct: 719 LSREVLTIQARGDKDSAKLFLKKYGVISEPLKLALHNLERIQVPVDLAAEFPIAKEIL 776
>gi|297839837|ref|XP_002887800.1| hypothetical protein ARALYDRAFT_477144 [Arabidopsis lyrata subsp.
lyrata]
gi|297333641|gb|EFH64059.1| hypothetical protein ARALYDRAFT_477144 [Arabidopsis lyrata subsp.
lyrata]
Length = 792
Score = 1197 bits (3098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/793 (72%), Positives = 664/793 (83%), Gaps = 22/793 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPR--------------------SEVHRVGDYHRTVNAWIF 45
+ EEHLDVLT +G+KTG+TKPR EVHR GDYHR V+ WIF
Sbjct: 1 MAEEHLDVLTKSGEKTGVTKPRHLFSNRKLLGSCFSSQFHSLGEVHRDGDYHRAVHVWIF 60
Query: 46 AESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEF 105
E+TQELLLQ R+D KDSWPG WDISSAGHISAGD SLISAQREL EELG+ LPKDAFE
Sbjct: 61 VETTQELLLQLRSDDKDSWPGQWDISSAGHISAGDPSLISAQRELHEELGVKLPKDAFEK 120
Query: 106 VFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165
+F FLQ+ V NDGKFINNEF DVYLVT L+PIPLEAFTLQ+ EVSAV Y+ YEEY+N LA
Sbjct: 121 IFVFLQECVTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKEEVSAVNYVPYEEYRNFLA 180
Query: 166 KDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDAD 225
K+DP++VPYDVNG YG+LF+II QR + N+ RSL+LQKQL+RY+ V+L A L LS+AD
Sbjct: 181 KEDPAYVPYDVNGEYGKLFDIIKQRCQVNSEARSLSLQKQLQRYSPVTLEAMLTELSEAD 240
Query: 226 KEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSL 285
++AL L++KAA +MD+IFY QVW SNP LRDWLK+HA+ASEL+KLKW Y+ INKSPWSSL
Sbjct: 241 QKALSLIVKAAKIMDDIFYEQVWNSNPALRDWLKDHANASELNKLKWDYFTINKSPWSSL 300
Query: 286 DENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWK 345
DENEAFL+TADSAV LLP ATK + GWKG+EY+A+FP+ KPPGANFYPPDMDKMEF LW
Sbjct: 301 DENEAFLSTADSAVMLLPGATKSIAGWKGIEYRAAFPVTKPPGANFYPPDMDKMEFTLWL 360
Query: 346 SSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSY 405
+ LTE+Q+ AT FF+VIKRRSE NLD+S H+ +T S DLY+VPYSE Y
Sbjct: 361 NGLTEEQKHAATGFFSVIKRRSEANLDAS--DHLAGSTKKFPDSNSDLYTVPYSEIYRPL 418
Query: 406 LTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETY 465
LT+ASELLHKAGD+ SSPSLK+LLHSKA+AFLSN YY+SDIAW++LDS+LD+TIGPYETY
Sbjct: 419 LTKASELLHKAGDLVSSPSLKKLLHSKAEAFLSNEYYESDIAWMDLDSKLDITIGPYETY 478
Query: 466 EDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQ 525
ED IFGYKATFE FIGIRDDKATA +KLFGDNL++LE NLP+D+ YKS DV AAPIRVIQ
Sbjct: 479 EDEIFGYKATFETFIGIRDDKATADLKLFGDNLKLLEDNLPLDSVYKSTDVSAAPIRVIQ 538
Query: 526 LIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQ 585
LIYNSGDVKGPQTVA+NLPNDE+IVKDRGTSMVMLKNV EAKF++IL+PIA++ I KEQ+
Sbjct: 539 LIYNSGDVKGPQTVAYNLPNDEKIVKDRGTSMVMLKNVQEAKFEHILKPIAEITISKEQR 598
Query: 586 ELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL 645
LVDFDSFFTH ICHECCHGIGPH+ITLPDG+ STVR ELQE+HSAMEEAKADIVGLWAL
Sbjct: 599 GLVDFDSFFTHTICHECCHGIGPHTITLPDGQTSTVRKELQEVHSAMEEAKADIVGLWAL 658
Query: 646 KFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDD 705
KFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D
Sbjct: 659 KFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHKDS 718
Query: 706 TFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPV 765
TFSVDF +EGAVESLS EILTIQ +GDK A+LLL KYCT+T PLK AL+ LE V+VPV
Sbjct: 719 TFSVDFATIEGAVESLSHEILTIQGKGDKNGATLLLNKYCTITGPLKTALENLERVKVPV 778
Query: 766 DIAPTFTAVNKLL 778
DI+PTF L+
Sbjct: 779 DISPTFPFAEALM 791
>gi|242063356|ref|XP_002452967.1| hypothetical protein SORBIDRAFT_04g035685 [Sorghum bicolor]
gi|241932798|gb|EES05943.1| hypothetical protein SORBIDRAFT_04g035685 [Sorghum bicolor]
Length = 775
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/771 (71%), Positives = 643/771 (83%), Gaps = 4/771 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EEHLDVL G+KTG++KPRSEVHR GDYHR V+ WI++EST ELLLQRRAD KDSWPG
Sbjct: 6 EEHLDVLNAAGEKTGVSKPRSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDSWPGQ 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGDSSL SAQREL+EELGINLP DAFE +F FLQ+ VIN+G + NNE+ D
Sbjct: 66 WDISSAGHISAGDSSLFSAQRELEEELGINLPVDAFELLFVFLQECVINNGTYTNNEYND 125
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL PIPLEAFTLQ++EVSAV+Y+ +EYK+ LAK+ FVPYDVNG YGQLF+II
Sbjct: 126 VYLVTTLTPIPLEAFTLQESEVSAVRYMRCDEYKSCLAKESGEFVPYDVNGQYGQLFSII 185
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYKENT R LTLQKQ+ RYA + L +L LS+ D+EAL +++AA V+D+IFY QV
Sbjct: 186 EERYKENTESRCLTLQKQMNRYAPIHLEPDLTSLSEGDREALGYILEAAIVIDDIFYEQV 245
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SN +LRDWLK H+++S DKLKW Y+ INKSPWS LDEN+AFL+TADSAVKLL DATK
Sbjct: 246 WNSNKMLRDWLKAHSESSSFDKLKWAYHSINKSPWSCLDENKAFLSTADSAVKLLTDATK 305
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
PV+GWKG+EY+A+FPL KPPGANFYPPDMDK EFELWKSSLT+K+Q+DAT FFTVIKR
Sbjct: 306 PVSGWKGIEYRAAFPLEKPPGANFYPPDMDKAEFELWKSSLTDKEQKDATGFFTVIKRHD 365
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
+ S D T + DL+ VPYS+EY L +A+ELL KA + SPSLK
Sbjct: 366 SLSSSSLTQLDGSDQTK----TKDDLFIVPYSKEYRPALEKAAELLEKASACSDSPSLKN 421
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA+AFLSN+YY+SDIAW+ELDS LD+TIGPYETYED +F YKATFEAF+GIRDD A
Sbjct: 422 LLRTKANAFLSNDYYESDIAWMELDSNLDLTIGPYETYEDGLFSYKATFEAFVGIRDDTA 481
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T+QVKLFGD LQ LE+NLPMDN +KS + AAPIRVI L+YNSGDVKGPQT+AFNLPNDE
Sbjct: 482 TSQVKLFGDQLQDLEKNLPMDNIFKSDSISAAPIRVINLLYNSGDVKGPQTIAFNLPNDE 541
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIV +RGT MVMLKN+SEAKFK+IL+PIAD CIR+EQ+E VDF+ ++TH +CHECCHGIG
Sbjct: 542 RIVNERGTCMVMLKNISEAKFKHILKPIADACIREEQKEYVDFEPYYTHIVCHECCHGIG 601
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PHSITLP G++STVR ELQE +SA+EEAKADIVGLWAL FLI + LLPKSL +SMYVSFL
Sbjct: 602 PHSITLPSGKKSTVRRELQEFYSALEEAKADIVGLWALNFLIKKGLLPKSLSQSMYVSFL 661
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
A CFRS+RFGLEE+HGKGQALQFNWL+EK A +LHSD FSVDF KVE AVESLS EILT
Sbjct: 662 ASCFRSIRFGLEEAHGKGQALQFNWLYEKGALVLHSDGKFSVDFTKVEEAVESLSREILT 721
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQA+GDK +A LLQ T+TQPL+VAL+K+E++QVPVDIAP F NKLL
Sbjct: 722 IQAKGDKPSAQSLLQSRATLTQPLRVALEKIEHMQVPVDIAPIFGTANKLL 772
>gi|326495548|dbj|BAJ85870.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/771 (70%), Positives = 643/771 (83%), Gaps = 4/771 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVLT G KTG++KPRSEVHR GDYHR V+ WI+ EST ELLLQRRAD KDSWPG
Sbjct: 7 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYCESTGELLLQRRADCKDSWPGQ 66
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGH+SAGDSSL SA+RELQEELGI LP DAFE +F FLQ+ VIN+G + NNE+ D
Sbjct: 67 WDISSAGHVSAGDSSLSSARRELQEELGIKLPVDAFELIFVFLQECVINNGTYTNNEYND 126
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL PIPLEAFTLQ++EVSAV+Y+ +EYK+ LA + +VPYDVNG YGQLF+II
Sbjct: 127 VYLVTTLTPIPLEAFTLQESEVSAVRYMHRDEYKSCLAAESGEYVPYDVNGQYGQLFSII 186
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYK+NT RSLTLQKQ+ RYA + L EL LS+ D+EAL ++KA+ V+DEIFY QV
Sbjct: 187 EERYKDNTESRSLTLQKQISRYAPIHLEPELTTLSEGDREALGYILKASMVIDEIFYEQV 246
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SN +LRDWLK HAD+S LD LKW YY INKSPWS LDEN+AFL+TADSAVKLL DATK
Sbjct: 247 WNSNTMLRDWLKAHADSSSLDTLKWAYYSINKSPWSCLDENKAFLSTADSAVKLLTDATK 306
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
P++GWKGLEY+A+FPL KP GANFYP DMDKMEF+LWKS LT+K+Q+DAT FFTVIKR
Sbjct: 307 PISGWKGLEYRAAFPLDKPRGANFYPADMDKMEFDLWKSGLTDKEQKDATGFFTVIKRPD 366
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
S + TN S DL+ VPYS+EY + L +A+ELL KA D + PSLK
Sbjct: 367 ALLTTSVAQSDGPNQTNTSD----DLFIVPYSKEYKTSLEKAAELLLKASDCSDCPSLKN 422
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA+AFLSN+YY+SDIAW+ELDS +D+TIGPYETYED +F YKATFEAF+G+RD+ A
Sbjct: 423 LLKTKANAFLSNDYYESDIAWMELDSNIDITIGPYETYEDGLFSYKATFEAFVGVRDEVA 482
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T+QVKLFGD L+ LE+NLP+DN YKS +V AAPIRV+ L+YNSGDVKGPQT+AFNLPNDE
Sbjct: 483 TSQVKLFGDQLEDLEKNLPLDNIYKSDNVSAAPIRVMNLLYNSGDVKGPQTIAFNLPNDE 542
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIV +RGTSMVMLKNVSEAKFK+IL+PIA+ CIR+EQ+E VDF+ ++TH +CHECCHGIG
Sbjct: 543 RIVNERGTSMVMLKNVSEAKFKHILKPIANACIREEQKEYVDFEPYYTHIVCHECCHGIG 602
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PHSITLP G++STVR+ELQE HSA+EEAKADIVGLWAL FLI + LLPKSL KSMYVSFL
Sbjct: 603 PHSITLPGGKKSTVRMELQECHSALEEAKADIVGLWALNFLINKGLLPKSLSKSMYVSFL 662
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNWL++K AFILHSD FS+DF KVE AVESL EI+T
Sbjct: 663 AGCFRSIRFGLEEAHGKGQALQFNWLYDKGAFILHSDGKFSIDFTKVEEAVESLGREIMT 722
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQA+GDK AA LLQ T+TQPL+VAL+K+E++QVPVDIAP F +KLL
Sbjct: 723 IQAKGDKPAAQSLLQSRATLTQPLRVALEKIEHMQVPVDIAPIFGTASKLL 773
>gi|218191732|gb|EEC74159.1| hypothetical protein OsI_09255 [Oryza sativa Indica Group]
Length = 776
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/771 (71%), Positives = 644/771 (83%), Gaps = 4/771 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVLT G+KTG +KPRSEVHR GDYHR V+ WI++EST ELLLQRRAD KDSWPG
Sbjct: 6 EERLDVLTAGGEKTGASKPRSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDSWPGQ 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGDSSL SAQREL EELGI LP DAFE +F FLQ+ VIN+G + NNE+ D
Sbjct: 66 WDISSAGHISAGDSSLSSAQRELDEELGIKLPSDAFELLFVFLQECVINNGTYTNNEYND 125
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL PIPLEAFTLQ++EVSAV+Y+ +EYK+ LAK+ +VPYDVNG YGQLF+II
Sbjct: 126 VYLVTTLTPIPLEAFTLQESEVSAVRYMHLDEYKSCLAKESGEYVPYDVNGTYGQLFSII 185
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYK+N RSLTLQKQ+ RYA + L EL LS+ D+EAL ++KA+ V+D+IFY QV
Sbjct: 186 EERYKDNIESRSLTLQKQINRYAPIHLEPELTSLSEGDREALGYILKASIVIDDIFYEQV 245
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SN LRDWLK A+ S DKLKW+YY INKSPWS LDEN+AFL+TADSAVKLL DATK
Sbjct: 246 WNSNCTLRDWLKARANYSSFDKLKWLYYSINKSPWSCLDENKAFLSTADSAVKLLTDATK 305
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
V+GWKG+EY+A+FP PPGANFYPPDMDKMEFELWK+ L EK+Q+ AT FFTVIKR
Sbjct: 306 SVSGWKGIEYRAAFPRDNPPGANFYPPDMDKMEFELWKNGLPEKEQKYATGFFTVIKRHD 365
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
L S L+ D +N + S DL+ VPYSEEY S L +A+ELLHKA + + SPSLK
Sbjct: 366 AL-LPSILAQS--DGSNQTKTSD-DLFVVPYSEEYKSSLEKAAELLHKASECSDSPSLKN 421
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA+AFLSN+YY+SDIAW+ELDS LDVTIGPYETYED +F YKATFEAF+G+RDD A
Sbjct: 422 LLKTKANAFLSNDYYESDIAWMELDSNLDVTIGPYETYEDGLFSYKATFEAFVGVRDDIA 481
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T+QVKLFGD LQ LE++LP+DN YKS +V AAPIRVI L+YNSGDVKGPQT+AFNLPNDE
Sbjct: 482 TSQVKLFGDQLQDLEKHLPLDNIYKSDNVSAAPIRVINLLYNSGDVKGPQTIAFNLPNDE 541
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIV +RGTSMVMLKN+SEAKFK+IL+PIA+ CIR+EQ++ VDF+ ++TH +CHECCHGIG
Sbjct: 542 RIVNERGTSMVMLKNISEAKFKHILKPIANACIREEQEDYVDFEPYYTHIVCHECCHGIG 601
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PHSITLP G++STVR+ELQE HSA+EEAKADIVGLWAL FLI + LLPKSL +SMYVSFL
Sbjct: 602 PHSITLPTGKRSTVRMELQEFHSALEEAKADIVGLWALNFLIKKGLLPKSLSESMYVSFL 661
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNWL+EK AF+LHSD FSVDF KVE AVESLS EILT
Sbjct: 662 AGCFRSIRFGLEEAHGKGQALQFNWLYEKGAFVLHSDGKFSVDFTKVEDAVESLSREILT 721
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQA+GDK AA LLQ + ++TQPL+VAL K+E++QVPVDI P F NKLL
Sbjct: 722 IQAKGDKPAAQSLLQSHASLTQPLRVALDKIEHMQVPVDITPIFGTANKLL 772
>gi|115449177|ref|NP_001048368.1| Os02g0793300 [Oryza sativa Japonica Group]
gi|47497142|dbj|BAD19191.1| MutT/nudix protein-like [Oryza sativa Japonica Group]
gi|47497589|dbj|BAD19659.1| MutT/nudix protein-like [Oryza sativa Japonica Group]
gi|113537899|dbj|BAF10282.1| Os02g0793300 [Oryza sativa Japonica Group]
Length = 776
Score = 1143 bits (2957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/771 (70%), Positives = 643/771 (83%), Gaps = 4/771 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVLT G+KTG +K RSEVHR GDYHR V+ WI++EST ELLLQRRAD KD+WPG
Sbjct: 6 EERLDVLTAGGEKTGASKARSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDTWPGQ 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGDSSL SAQREL EELGI LP DAFE +F FLQ+ VIN+G + NNE+ D
Sbjct: 66 WDISSAGHISAGDSSLSSAQRELDEELGIKLPSDAFELLFVFLQECVINNGTYTNNEYND 125
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL PIPLEAFTLQ++EVSAV+Y+ +EYK+ LAK+ +VPYDVNG YGQLF+II
Sbjct: 126 VYLVTTLTPIPLEAFTLQESEVSAVRYMHLDEYKSCLAKESGEYVPYDVNGTYGQLFSII 185
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYK+N RSLTLQKQ+ RYA + L EL LS+ D+EAL ++KA+ V+D+IFY QV
Sbjct: 186 EERYKDNIESRSLTLQKQINRYAPIHLEPELTSLSEGDREALGYILKASIVIDDIFYEQV 245
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SN LRDWLK A+ S DKLKW+YY INKSPWS LDEN+AFL+TADSAVKLL DATK
Sbjct: 246 WNSNCTLRDWLKARANYSSFDKLKWLYYSINKSPWSCLDENKAFLSTADSAVKLLTDATK 305
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
V+GWKG+EY+A+FP PPGANFYPPDMDKMEFELWK+ L EK+Q+ AT FFTVIKR
Sbjct: 306 SVSGWKGIEYRAAFPRDNPPGANFYPPDMDKMEFELWKNGLPEKEQKYATGFFTVIKRHD 365
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
L S L+ D +N + S DL+ VPYSEEY S L +A+ELLHKA + + SPSLK
Sbjct: 366 AL-LPSILAQS--DGSNQTKTSD-DLFVVPYSEEYKSSLEKAAELLHKASECSDSPSLKN 421
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA+AFLSN+YY+SDIAW+ELDS LDVTIGPYETYED +F YKATFEAF+G+RDD A
Sbjct: 422 LLKTKANAFLSNDYYESDIAWMELDSNLDVTIGPYETYEDGLFSYKATFEAFVGVRDDIA 481
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T+QVKLFGD L+ LE++LP+DN YKS +V AAPIRVI L+YNSGDVKGPQT+AFNLPNDE
Sbjct: 482 TSQVKLFGDQLRDLEKHLPLDNIYKSDNVSAAPIRVINLLYNSGDVKGPQTIAFNLPNDE 541
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIV +RGTSMVMLKN+SEAKFK+IL+PIA+ CIR+EQ++ VDF+ ++TH +CHECCHGIG
Sbjct: 542 RIVNERGTSMVMLKNISEAKFKHILKPIANACIREEQEDYVDFEPYYTHIVCHECCHGIG 601
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PHSITLP G++STVR+ELQE HSA+EEAKADIVGLWAL FLI + LLPKSL +SMYVSFL
Sbjct: 602 PHSITLPTGKRSTVRMELQEFHSALEEAKADIVGLWALNFLIKKGLLPKSLSESMYVSFL 661
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNWL+EK AF+LHSD FSVDF KVE AVESLS EILT
Sbjct: 662 AGCFRSIRFGLEEAHGKGQALQFNWLYEKGAFVLHSDGKFSVDFTKVEDAVESLSREILT 721
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQA+GDK AA LLQ + ++TQPL+VAL K+E++QVPVDI P F NKLL
Sbjct: 722 IQAKGDKPAAQSLLQSHASLTQPLRVALDKIEHMQVPVDITPIFGTANKLL 772
>gi|449436639|ref|XP_004136100.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus]
gi|449509177|ref|XP_004163517.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus]
Length = 768
Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/765 (71%), Positives = 653/765 (85%), Gaps = 12/765 (1%)
Query: 18 GQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRA--DFKDSWPGMWDISSAGH 75
G K I+K R VGDY+R V+ WIFAESTQELLLQ R+ + K+SWPG+W+IS+A
Sbjct: 6 GDKPLISKYRG----VGDYNRAVHVWIFAESTQELLLQLRSVSNSKESWPGLWNISTASQ 61
Query: 76 ISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV--INDGKFINNEFADVYLVTT 133
I+AGDSSL++A+R+LQ+ELG+ LPKDAFE +F FL + V N KF DVYLVTT
Sbjct: 62 IAAGDSSLVTARRKLQKELGVILPKDAFEMIFDFLPETVRITNGDKFKT----DVYLVTT 117
Query: 134 LNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKE 193
L+PIPLEAFTLQ++EVSAVKYI Y +YK+LL + +VPYDV+G YGQLF+I++QRY+
Sbjct: 118 LDPIPLEAFTLQESEVSAVKYIHYLKYKSLLGSQNSEYVPYDVDGQYGQLFDILTQRYQV 177
Query: 194 NTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPV 253
+ + RSLTL+KQL+RYA V LN ELAGL+DA+KE L LVIKAA ++D+IF+LQVWYSNP
Sbjct: 178 DNVARSLTLKKQLQRYASVPLNVELAGLTDANKEVLALVIKAAAMIDKIFHLQVWYSNPC 237
Query: 254 LRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWK 313
LRDWL++ A SELD+LKW YY INK+PWSSLDENEA+LTTADSA+ L+P+AT+ V GWK
Sbjct: 238 LRDWLEKSAALSELDELKWAYYRINKTPWSSLDENEAYLTTADSAIILVPEATRQVRGWK 297
Query: 314 GLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDS 373
GLEYKA+FP PPGANFYPPDM+KMEFELWK+SLTE QQ T FF+VIKRRSE+NLD
Sbjct: 298 GLEYKAAFPSKIPPGANFYPPDMNKMEFELWKNSLTEDQQSFVTGFFSVIKRRSEYNLDL 357
Query: 374 SLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKA 433
S+ D+TNH GS YDLY +P+S+EY+S+L++A+ELLHKAGD+ SSPSLKR LH+KA
Sbjct: 358 SICKGGFDSTNHMEGSTYDLYGIPFSQEYSSFLSKAAELLHKAGDITSSPSLKRFLHTKA 417
Query: 434 DAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKL 493
AFLSN+YY+SDIAW+ELDSELD+TIGPYETYED+IFGYKATFEAFI IRD+K TAQVKL
Sbjct: 418 SAFLSNDYYESDIAWMELDSELDITIGPYETYEDSIFGYKATFEAFIAIRDEKGTAQVKL 477
Query: 494 FGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDR 553
FGDN+QVLEQNLPMD+AYKSKDV AAPIRV+QL+YN+GDVKGPQ VAFNLPNDERIVKDR
Sbjct: 478 FGDNMQVLEQNLPMDDAYKSKDVSAAPIRVVQLVYNAGDVKGPQIVAFNLPNDERIVKDR 537
Query: 554 GTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
GTSMVMLKNVSEAKFK+IL+PIA+ CI EQ+E VDFDS+FTH ICHECCHGIGPH+ITL
Sbjct: 538 GTSMVMLKNVSEAKFKHILQPIANACITNEQREFVDFDSYFTHVICHECCHGIGPHTITL 597
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
PDG+++TVRL+LQELHSA+EEAKAD VGLWAL+FL + LLP +KS+Y + LAGCFRS
Sbjct: 598 PDGKETTVRLKLQELHSALEEAKADTVGLWALRFLTLQGLLPGMSLKSVYTTILAGCFRS 657
Query: 674 VRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGD 733
VRFGL E+HGKGQAL FNWL+EK+AFI ++D+TFSVDFDKVE AVESLS EILTIQA+GD
Sbjct: 658 VRFGLSEAHGKGQALLFNWLYEKKAFIFNADETFSVDFDKVEDAVESLSREILTIQAKGD 717
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
KE+A+LLLQKY M++PLKVALQ LE +QVPVDIAP F ++L
Sbjct: 718 KESANLLLQKYGVMSEPLKVALQNLERIQVPVDIAPEFPIAKEVL 762
>gi|413924242|gb|AFW64174.1| hypothetical protein ZEAMMB73_296869 [Zea mays]
Length = 775
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/771 (69%), Positives = 639/771 (82%), Gaps = 4/771 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVL G K G++KPRSEVHR GDYHR V+ WI++EST ELLLQRRAD KDSWPG
Sbjct: 6 EERLDVLNAAGDKIGVSKPRSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDSWPGQ 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAG+SSL SAQREL+EELGINLP DAFE +F FLQ+ VIN+G + NNE+ D
Sbjct: 66 WDISSAGHISAGESSLFSAQRELEEELGINLPVDAFELIFVFLQECVINNGTYTNNEYND 125
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL PIPLEAFTLQ++EVSAV+Y+ +EYK+ LAK+ +VPYDVNG YGQLF+II
Sbjct: 126 VYLVTTLTPIPLEAFTLQESEVSAVRYMRCDEYKSCLAKESREYVPYDVNGQYGQLFSII 185
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYKENT +SLTLQKQ+ RY + L +L LS+ D+EAL ++KAA V+D+IFY QV
Sbjct: 186 EERYKENTESQSLTLQKQMNRYVPIHLEPDLTSLSEGDREALGYILKAAIVIDDIFYEQV 245
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SN +LRDWLK H++ S DKLKW YY INKS WS LDEN+AFL+TADSAV+LL +ATK
Sbjct: 246 WNSNKMLRDWLKGHSEFSPFDKLKWAYYSINKSTWSCLDENKAFLSTADSAVQLLTEATK 305
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
PV+GWKG+EY+A+FPL KPPGANFYPPDMDK EFELWKS LT+K+Q DAT FFTVIKR
Sbjct: 306 PVSGWKGIEYRAAFPLHKPPGANFYPPDMDKAEFELWKSKLTDKEQNDATGFFTVIKRHD 365
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
+ S D T + DL+ VPYS+EY +L +A+ELL KA + SPSLK
Sbjct: 366 SLSSSSLTQSDGSDQTK----TKDDLFIVPYSKEYRPFLEKAAELLEKASACSDSPSLKN 421
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA+AFLSN+YY+SDIAW+ELDS LD+TIGPYETYED++F YKATFEAF+GIRDD A
Sbjct: 422 LLRTKANAFLSNDYYESDIAWMELDSNLDLTIGPYETYEDSLFSYKATFEAFVGIRDDTA 481
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T+QVKLFGD LQ LE+NLPMDN +KS + AAPIRVI L+YN+GDVKGPQT+AFNLPNDE
Sbjct: 482 TSQVKLFGDQLQDLEKNLPMDNIFKSDSISAAPIRVINLLYNAGDVKGPQTIAFNLPNDE 541
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIV +RGTSMVMLKN+SEAKFK+IL+PIAD CIR+EQ+E VDF+ ++TH +CHECCHGIG
Sbjct: 542 RIVNERGTSMVMLKNISEAKFKHILKPIADACIREEQKEYVDFEPYYTHIVCHECCHGIG 601
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PHSITLP G+++TVR ELQE HSA+EEAKADIVGLWAL FLI + LLPKSL +SMYVSFL
Sbjct: 602 PHSITLPSGKKTTVRRELQEFHSALEEAKADIVGLWALNFLIKKGLLPKSLSQSMYVSFL 661
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNWL+EK AF+L SD FSVDF VE AVESLS EILT
Sbjct: 662 AGCFRSIRFGLEEAHGKGQALQFNWLYEKGAFVLQSDGKFSVDFTMVEDAVESLSREILT 721
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQA+GDK +A LLQ T+TQPL++AL+++E++QVPVDIAP F+ NKL
Sbjct: 722 IQAKGDKPSAQSLLQSRATLTQPLRMALERIEHMQVPVDIAPVFSTANKLF 772
>gi|357137399|ref|XP_003570288.1| PREDICTED: nudix hydrolase 3-like [Brachypodium distachyon]
Length = 775
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/771 (70%), Positives = 636/771 (82%), Gaps = 4/771 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVLT G KTG++KPRSEVHR GDYHR V+ WI++EST ELLLQRRAD KDSWP
Sbjct: 6 EERLDVLTAAGDKTGVSKPRSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDSWPSQ 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGDSSL SAQREL EELGI LP DAFE +F FLQ+ VIN+G + NNE+ D
Sbjct: 66 WDISSAGHISAGDSSLSSAQRELHEELGIKLPIDAFELLFVFLQECVINNGTYTNNEYND 125
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTTL PIP EAFTLQ++EVSAV+Y+ +EYK+ LA + +VPYDVNG YGQLF+II
Sbjct: 126 VYLVTTLTPIPPEAFTLQESEVSAVRYMHLDEYKSCLAAESGEYVPYDVNGQYGQLFSII 185
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RYK+N RSLTL+KQ+ RYA + L EL LS+ D+EAL ++KA+ V+D+IFY QV
Sbjct: 186 EERYKDNIESRSLTLKKQISRYAPIHLEPELTTLSEGDREALGYILKASIVIDDIFYEQV 245
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
W SN +L+DWLK AD+S DKLKW YY INKSPWS LDEN+AFL+TADSAVKLL DATK
Sbjct: 246 WNSNRMLKDWLKARADSSSFDKLKWAYYSINKSPWSCLDENKAFLSTADSAVKLLTDATK 305
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
PV GWKG+EY A+FPL KP GANFYPPDM+KMEFELWKS LT+K+Q+DAT FFTVIKR
Sbjct: 306 PVPGWKGVEYHAAFPLDKPLGANFYPPDMNKMEFELWKSGLTDKEQKDATGFFTVIKRPD 365
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
S + TN S DL+ VPYS+EY S L +A+ELLHKA + + SPSLK
Sbjct: 366 ALLPSSLAQSEGPNQTNTSD----DLFIVPYSQEYKSSLEKAAELLHKAAECSDSPSLKN 421
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA+AFLSN+YY+SDIAW+ELDS +DVTIGPYETYED +F YKATFEAF+GIRDD A
Sbjct: 422 LLRTKANAFLSNDYYESDIAWMELDSNIDVTIGPYETYEDGLFSYKATFEAFVGIRDDIA 481
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T+QVKLFG L+ LE+NLPMDN YKS V AAPIRV+ L+YNSGDVKGPQT+AFNLPNDE
Sbjct: 482 TSQVKLFGGQLEDLEKNLPMDNIYKSDHVSAAPIRVMNLLYNSGDVKGPQTIAFNLPNDE 541
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIV +RGTSMVMLKN+SEAKFK+IL+PIA+ CIR+EQ++ VDF+ ++TH +CHECCHGIG
Sbjct: 542 RIVNERGTSMVMLKNISEAKFKHILKPIANACIREEQKDYVDFEPYYTHIVCHECCHGIG 601
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PHSI LP G++STVR+ELQE HSA+EEAKADIVGLWAL FLI + LLPKSL KSMYVSFL
Sbjct: 602 PHSIILPSGKKSTVRMELQEFHSALEEAKADIVGLWALNFLINKGLLPKSLSKSMYVSFL 661
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNW++EK AFILHSD FS+DF KVE AVESLS EILT
Sbjct: 662 AGCFRSIRFGLEEAHGKGQALQFNWMYEKGAFILHSDGKFSIDFTKVEDAVESLSREILT 721
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
IQA+GDK AA LLQ T+TQPL VAL+K+E++QVPVDIAP F KLL
Sbjct: 722 IQAKGDKLAAQSLLQSRATLTQPLHVALEKIEHMQVPVDIAPVFGTATKLL 772
>gi|222623827|gb|EEE57959.1| hypothetical protein OsJ_08693 [Oryza sativa Japonica Group]
Length = 1268
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/787 (68%), Positives = 637/787 (80%), Gaps = 20/787 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEV---------HRVG-------DYHRTVNAWIFAESTQE 51
EE LDVLT G+KTG +K R R G HR V+ WI++EST E
Sbjct: 6 EERLDVLTAGGEKTGASKARHAAATPYPAYSRRRFGRRCTGTATTHRAVHVWIYSESTGE 65
Query: 52 LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111
LLLQRRAD KD+WPG WDISSAGHISAGDSSL SAQREL EELGI LP DAFE +F FLQ
Sbjct: 66 LLLQRRADCKDTWPGQWDISSAGHISAGDSSLSSAQRELDEELGIKLPSDAFELLFVFLQ 125
Query: 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
+ VIN+G + NNE+ DVYLVTTL PIPLEAFTLQ++EVSAV+Y+ +EYK+ LAK+ +
Sbjct: 126 ECVINNGTYTNNEYNDVYLVTTLTPIPLEAFTLQESEVSAVRYMHLDEYKSCLAKESGEY 185
Query: 172 VPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVL 231
VPYDVNG YGQLF+II +RYK+N RSLTLQKQ+ RYA + L EL LS+ D+EAL
Sbjct: 186 VPYDVNGTYGQLFSIIEERYKDNIESRSLTLQKQINRYAPIHLEPELTSLSEGDREALGY 245
Query: 232 VIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAF 291
++KA+ V+D+IFY QVW SN LRDWLK A+ S DKLKW+YY INKSPWS LDEN+AF
Sbjct: 246 ILKASIVIDDIFYEQVWNSNCTLRDWLKARANYSSFDKLKWLYYSINKSPWSCLDENKAF 305
Query: 292 LTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEK 351
L+TADSAVKLL DATK V+GWKG+EY+A+FP PPGANFYPPDMDKMEFELWK+ L EK
Sbjct: 306 LSTADSAVKLLTDATKSVSGWKGIEYRAAFPRDNPPGANFYPPDMDKMEFELWKNGLPEK 365
Query: 352 QQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
+Q+ AT FFTVIKR L S L+ D +N + S DL+ VPYSEEY S L +A+E
Sbjct: 366 EQKYATGFFTVIKRHDAL-LPSILAQS--DGSNQTKTSD-DLFVVPYSEEYKSSLEKAAE 421
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFG 471
LLHKA + + SPSLK LL +KA+AFLSN+YY+SDIAW+ELDS LDVTIGPYETYED +F
Sbjct: 422 LLHKASECSDSPSLKNLLKTKANAFLSNDYYESDIAWMELDSNLDVTIGPYETYEDGLFS 481
Query: 472 YKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSG 531
YKATFEAF+G+RDD AT+QVKLFGD L+ LE++LP+DN YKS +V AAPIRVI L+YNSG
Sbjct: 482 YKATFEAFVGVRDDIATSQVKLFGDQLRDLEKHLPLDNIYKSDNVSAAPIRVINLLYNSG 541
Query: 532 DVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFD 591
DVKGPQT+AFNLPNDERIV +RGTSMVMLKN+SEAKFK+IL+PIA+ CIR+EQ++ VDF+
Sbjct: 542 DVKGPQTIAFNLPNDERIVNERGTSMVMLKNISEAKFKHILKPIANACIREEQEDYVDFE 601
Query: 592 SFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGR 651
++TH +CHECCHGIGPHSITLP G++STVR+ELQE HSA+EEAKADIVGLWAL FLI +
Sbjct: 602 PYYTHIVCHECCHGIGPHSITLPTGKRSTVRMELQEFHSALEEAKADIVGLWALNFLIKK 661
Query: 652 DLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDF 711
LLPKSL +SMYVSFLAGCFRS+RFGLEE+HGKGQALQFNWL+EK AF+LHSD FSVDF
Sbjct: 662 GLLPKSLSESMYVSFLAGCFRSIRFGLEEAHGKGQALQFNWLYEKGAFVLHSDGKFSVDF 721
Query: 712 DKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
KVE AVESLS EILTIQA+GDK AA LLQ + ++TQPL+VAL K+E++QVPVDI P F
Sbjct: 722 TKVEDAVESLSREILTIQAKGDKPAAQSLLQSHASLTQPLRVALDKIEHMQVPVDITPIF 781
Query: 772 TAVNKLL 778
NKLL
Sbjct: 782 GTANKLL 788
>gi|449509173|ref|XP_004163516.1| PREDICTED: nudix hydrolase 3-like [Cucumis sativus]
Length = 702
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/693 (75%), Positives = 601/693 (86%), Gaps = 1/693 (0%)
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQ 146
+RELQEELG+ LPK+AFE +F FL + N G+FINNEF DVYLVTTL+PIPLEAFTLQ+
Sbjct: 3 RRELQEELGVILPKEAFELIFVFLNETSTNGGQFINNEFEDVYLVTTLDPIPLEAFTLQE 62
Query: 147 TEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGG-YGQLFNIISQRYKENTMERSLTLQKQ 205
+EVSAVKYI Y +YKNLLA +DP +VPYDVN YGQLF+II+QRYK + + RS TLQKQ
Sbjct: 63 SEVSAVKYIHYLDYKNLLANEDPEYVPYDVNAQQYGQLFDIIAQRYKVDNVARSSTLQKQ 122
Query: 206 LRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADAS 265
L+RYA VSLN EL GLSDADK AL L+IKAA +MDEIF LQVWYSNP L+DWL++HA AS
Sbjct: 123 LQRYASVSLNVELTGLSDADKGALDLLIKAAAIMDEIFNLQVWYSNPYLKDWLEKHAAAS 182
Query: 266 ELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPK 325
+LDKLKW YYLINK+PWS LDENEA+LTTADSA+KLLP+AT+ V+GWKGLEYKA+FP K
Sbjct: 183 QLDKLKWAYYLINKTPWSCLDENEAYLTTADSAIKLLPEATRRVSGWKGLEYKAAFPSQK 242
Query: 326 PPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNH 385
PPGANFYPPDMDKMEF WK SL E QQ FF+VIKR SE N D S+ +TNH
Sbjct: 243 PPGANFYPPDMDKMEFTQWKDSLPEDQQNIVAGFFSVIKRHSESNSDLSIDSRSPGSTNH 302
Query: 386 SVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD 445
GS +DLY+VP+S+EYNS+L++A+ELLHKAGD SSPSL+RLLHSKADAFLSN+YY+SD
Sbjct: 303 LEGSKHDLYNVPFSQEYNSFLSKAAELLHKAGDRTSSPSLRRLLHSKADAFLSNDYYESD 362
Query: 446 IAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNL 505
IAW+ELDS+LDVTIGPYETYED +FGYKATFEAFIGIRDDK T QVK FGDNLQVLEQNL
Sbjct: 363 IAWMELDSKLDVTIGPYETYEDTLFGYKATFEAFIGIRDDKGTTQVKFFGDNLQVLEQNL 422
Query: 506 PMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
PMDNAYKSKDV AAPIRV+QL+YN+GDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE
Sbjct: 423 PMDNAYKSKDVSAAPIRVVQLLYNAGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 482
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKFK+IL+PIADVCI EQ+E VDFDSFFTH ICHECCHGIGPH+ITLP+G+ STVRLEL
Sbjct: 483 AKFKHILQPIADVCITNEQREFVDFDSFFTHTICHECCHGIGPHTITLPNGKTSTVRLEL 542
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
QELHSA+EEAKADIVGLWAL+FL + LLP + +KS+Y +FL GCFRSVRFGL E+HGKG
Sbjct: 543 QELHSALEEAKADIVGLWALRFLTLQGLLPGASLKSVYATFLVGCFRSVRFGLLEAHGKG 602
Query: 686 QALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
QALQFNWL+EKEAFIL+ D+TFSV+F KVE AVESLS EILTIQARGDKE+A LLLQKY
Sbjct: 603 QALQFNWLYEKEAFILNPDETFSVNFGKVEDAVESLSREILTIQARGDKESAKLLLQKYG 662
Query: 746 TMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
M++PLK+AL LE +QVPVDIAP F ++L
Sbjct: 663 VMSEPLKLALNNLERIQVPVDIAPEFPVAKEIL 695
>gi|7715590|gb|AAF68108.1|AC010793_3 F20B17.11 [Arabidopsis thaliana]
Length = 865
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/892 (61%), Positives = 643/892 (72%), Gaps = 147/892 (16%)
Query: 6 VQEEHLDVLTMTGQKTGITKPR-----------------------------SEVHRVGDY 36
+ EEH DVLT +G+KTG++KPR EVHR GDY
Sbjct: 1 MAEEHFDVLTKSGEKTGVSKPRHVYCSSLLWSCFSSELTSIRLCLEPCHCRGEVHRDGDY 60
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96
HR V+ WIF E+TQ+LLLQ R+D KDSWPG WDISSAGHISAGD+SL+SAQREL+EELG+
Sbjct: 61 HRAVHVWIFVETTQQLLLQLRSDDKDSWPGQWDISSAGHISAGDTSLLSAQRELEEELGV 120
Query: 97 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
LPKDAFE +F FLQ+ V NDGKFINNEF DVYLVT L+PIPLEAFTLQ+ EVSAVKY+
Sbjct: 121 KLPKDAFEKIFVFLQECVTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKEEVSAVKYVP 180
Query: 157 YEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNA 216
YEEY+N L+K+DP++VPYDVNG YG+LF+II QR + NT RSL+LQKQL+RY+ V+L A
Sbjct: 181 YEEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQRCQVNTEARSLSLQKQLQRYSPVTLEA 240
Query: 217 --------------------------------------ELAGLSDADKEALVLVIKAATV 238
+L LS+AD++AL L++KAA +
Sbjct: 241 KVLICYIFSCDFFVSYAPNKSYFAPFHKRHFETPFIYMQLTELSEADQKALGLIVKAAKI 300
Query: 239 MDEIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSA 298
MD+IFY QVW SNP LRDWLK+HA+AS+LDKLKW Y+ INKSPWSSLDENEAFL+TADSA
Sbjct: 301 MDDIFYEQVWNSNPALRDWLKDHANASKLDKLKWDYFTINKSPWSSLDENEAFLSTADSA 360
Query: 299 VKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATS 358
VKLLP ATK + GWKGLEY+A+FP+ KPPGANFYPPDMDKMEF LW + LTE+Q+ AT
Sbjct: 361 VKLLPGATKAIAGWKGLEYRAAFPVTKPPGANFYPPDMDKMEFTLWLNGLTEEQKHAATG 420
Query: 359 FFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGD 418
FF+VIKRRSE NLD+S H+ +T S DLYS+PYSE Y +L +ASE L KAGD
Sbjct: 421 FFSVIKRRSEANLDAS--DHLASSTKKLPDSNSDLYSIPYSEIYRPFLKKASEFLQKAGD 478
Query: 419 MASSP----------------------------------SLKRLLHSKADAFLSNNYYDS 444
+ SSP SLK+LLHSKA+AFLSN YY+S
Sbjct: 479 LVSSPRYIFQTVSYPYHIKCIHPFDWLSILKYSPTMLSHSLKKLLHSKAEAFLSNEYYES 538
Query: 445 DIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
DIAW++LDS+LD+TIGPYETYED IFGYK +LE N
Sbjct: 539 DIAWMDLDSKLDITIGPYETYEDEIFGYK--------------------------LLEDN 572
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSG------------------DVKGPQTVAFNLPND 546
LP+++ YKS DV AAPIRVIQLIYNSG DVKGPQTVA+NLPND
Sbjct: 573 LPLESVYKSTDVSAAPIRVIQLIYNSGVSSPRHPSEIGKGRKCIADVKGPQTVAYNLPND 632
Query: 547 ERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGI 606
E+IVKDRGTSMVMLKNV EAKF++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGI
Sbjct: 633 EKIVKDRGTSMVMLKNVQEAKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGI 692
Query: 607 GPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSF 666
GPH+ITLP G+ STVR ELQE+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSF
Sbjct: 693 GPHTITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSF 752
Query: 667 LAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEIL 726
LAGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EIL
Sbjct: 753 LAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEIL 812
Query: 727 TIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
TIQ +GDK AA+LLL KYCT+T PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 813 TIQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 864
>gi|255543397|ref|XP_002512761.1| Nudix hydrolase, putative [Ricinus communis]
gi|223547772|gb|EEF49264.1| Nudix hydrolase, putative [Ricinus communis]
Length = 615
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/612 (80%), Positives = 548/612 (89%), Gaps = 11/612 (1%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
K R EVHR GDYHR V+ WI+AESTQELLLQ+RAD KDSWPG WDISSAGHISAGDSSLI
Sbjct: 4 KCRGEVHRDGDYHRAVHVWIYAESTQELLLQKRADCKDSWPGQWDISSAGHISAGDSSLI 63
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
SA+REL EELGI LPKDAFE +F FLQ+ VINDGKFINNE+ DVYLVTT++PIPLEAFTL
Sbjct: 64 SARRELHEELGIVLPKDAFELIFVFLQEYVINDGKFINNEYNDVYLVTTIDPIPLEAFTL 123
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQK 204
Q+TEVSAVKYI+YEEY++LL+K+ P +VPYDVNG YGQLF+II +RYKENT RSLTLQK
Sbjct: 124 QETEVSAVKYISYEEYRSLLSKEHPDYVPYDVNGQYGQLFDIIKKRYKENTAARSLTLQK 183
Query: 205 QLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA 264
QL RYA VSL+AEL GLSD D+EAL L+IKAA V+DEIFY QVWYSNP LRDWLK+HADA
Sbjct: 184 QLGRYAPVSLSAELTGLSDGDREALGLLIKAAKVVDEIFYHQVWYSNPALRDWLKDHADA 243
Query: 265 SELDKLKWMYYLINKSPW---------SSLDENEAFLTTADSAVKLLPDATKPVNGWKGL 315
SELDKLKW+YYLINKSPW SSLDEN+AFLTTADSA+KLLP ATK V WKGL
Sbjct: 244 SELDKLKWLYYLINKSPWQVFLGLLFVSSLDENKAFLTTADSAIKLLPKATKSVGEWKGL 303
Query: 316 EYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL 375
EYKA+FP+ KP GANFYPPDMDKMEFELWKS+LTE Q+ DAT FFTVIKRRSEF+L S L
Sbjct: 304 EYKAAFPILKPAGANFYPPDMDKMEFELWKSTLTESQELDATGFFTVIKRRSEFDLGSPL 363
Query: 376 SGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADA 435
S H +D T H VGS +DL++VPYS+EYNS L +A+ELLHKAGD+ASSPSLKRLLHSKADA
Sbjct: 364 SNHAIDGTYHLVGS-HDLFTVPYSKEYNSLLRKAAELLHKAGDLASSPSLKRLLHSKADA 422
Query: 436 FLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFG 495
FLSN+YYDSDIAW+ELDS+LDVTIGPYETYEDA+FGYKATFEA+IG+RDDKATAQ+KLFG
Sbjct: 423 FLSNDYYDSDIAWMELDSKLDVTIGPYETYEDALFGYKATFEAYIGVRDDKATAQLKLFG 482
Query: 496 DNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGT 555
DNLQVLEQNLPMD++YKS DV AAPIRVIQLIYN+GDVKGPQTVAFNLPNDERIVKDRGT
Sbjct: 483 DNLQVLEQNLPMDSSYKSTDVNAAPIRVIQLIYNAGDVKGPQTVAFNLPNDERIVKDRGT 542
Query: 556 SMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD 615
SMVMLKN+SEAKFK+IL+PIADVCI KEQ+ELVDF+SFFTH ICHECCHGIGPH+I LP+
Sbjct: 543 SMVMLKNISEAKFKHILQPIADVCITKEQKELVDFESFFTHTICHECCHGIGPHTIILPN 602
Query: 616 GRQSTVR-LELQ 626
G STVR L LQ
Sbjct: 603 GETSTVRKLNLQ 614
>gi|302811607|ref|XP_002987492.1| hypothetical protein SELMODRAFT_183198 [Selaginella moellendorffii]
gi|300144646|gb|EFJ11328.1| hypothetical protein SELMODRAFT_183198 [Selaginella moellendorffii]
Length = 752
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/770 (61%), Positives = 598/770 (77%), Gaps = 19/770 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVLT G G +KPR+ VHR GDYHR V I+AEST+++LLQ+RAD KDSWPG+
Sbjct: 2 EEFLDVLTPEGAHAGFSKPRNLVHRDGDYHRAVQVCIYAESTKQILLQKRADCKDSWPGL 61
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGD+SL + ++EL+EELGI LP+DAFE +F FLQ+ +NDGKFINNE+ D
Sbjct: 62 WDISSAGHISAGDTSLHTVRKELEEELGIILPEDAFELLFVFLQRVALNDGKFINNEYND 121
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTT++P+PLEAFTLQ++EVS VKY++ EEYK L K DP+++PYD++ Y LF+ +
Sbjct: 122 VYLVTTIDPMPLEAFTLQESEVSDVKYMSIEEYKMALIKKDPAYLPYDMDKEYHFLFSSL 181
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RY + R TLQ QL RY V+L E+ G+SD D +AL I+AA ++D IF Q
Sbjct: 182 EKRYASDAKHRISTLQSQLSRYCPVNLTGEIGGVSDGDIKALSYTIRAAQILDRIFIEQE 241
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
SNP L WL+++ + SELD LK Y+ INKSPWS LDENEAFLTTADSA+K +
Sbjct: 242 CSSNPDLSSWLEKNGENSELDHLKLSYFRINKSPWSCLDENEAFLTTADSAIKSTKATVR 301
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
V+GW GLEY+A+FP+ KPPGANFYP DMDK EFE WKS+L E+++EDA +FFTVI+R
Sbjct: 302 SVHGWNGLEYRAAFPVIKPPGANFYPLDMDKAEFEAWKSTLNEQEKEDAIAFFTVIRR-- 359
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
+AT+ S G L+ YSEEY YL A++LL+ AGD A +PSL+R
Sbjct: 360 -------------NATDASRG----LFLRKYSEEYKPYLVDAAKLLNTAGDCADTPSLQR 402
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA++F+SN+Y+DSD+AWIEL+S +DVTIGPYETYEDA+FGYKATFEAFIG+RD A
Sbjct: 403 LLKAKAESFVSNDYFDSDVAWIELESAIDVTIGPYETYEDALFGYKATFEAFIGVRDHVA 462
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T QV+LF LQ LE NLP+ + YKS +V A+PIRVIQLI+NSGDVKGPQTVAFNLPNDE
Sbjct: 463 TEQVRLFSGQLQTLEDNLPLADKYKSTNVKASPIRVIQLIFNSGDVKGPQTVAFNLPNDE 522
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIVK+RG++MVMLKN+S+ KF +IL PIA VCI + Q+ VDF++FF H ICHECCHGIG
Sbjct: 523 RIVKERGSAMVMLKNLSQTKFDHILLPIAKVCIAESQKHYVDFEAFFAHTICHECCHGIG 582
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PH+I LPDGR+STVRLELQE HS++EEAKAD+VGLWAL +L+ + LL + L KSMYVSFL
Sbjct: 583 PHTIVLPDGRESTVRLELQECHSSLEEAKADVVGLWALHYLLDQGLLSRDLEKSMYVSFL 642
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNW++ K F L+SD TFS++FDKV AV+SL TEI+T
Sbjct: 643 AGCFRSIRFGLEEAHGKGQALQFNWIYNKGGFELNSDGTFSINFDKVRDAVKSLCTEIMT 702
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
+QA GDK AA LL KY T+T L+ L ++ + ++PVD+ P+F + +L
Sbjct: 703 VQALGDKAAAISLLSKYATVTPALERMLSRVRDAKIPVDVVPSFDVLERL 752
>gi|302822281|ref|XP_002992799.1| hypothetical protein SELMODRAFT_187006 [Selaginella moellendorffii]
gi|300139347|gb|EFJ06089.1| hypothetical protein SELMODRAFT_187006 [Selaginella moellendorffii]
Length = 752
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/770 (61%), Positives = 596/770 (77%), Gaps = 19/770 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVLT G G +KPR+ VHR GDYHR V I+AEST+++LLQ+RAD KDSWPG+
Sbjct: 2 EEFLDVLTPEGAHAGFSKPRNLVHRDGDYHRAVQVCIYAESTKQILLQKRADCKDSWPGL 61
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDISSAGHISAGD+SL + ++EL+EELGI LP+DAFE +F FLQ+ +NDGKFINNE+ D
Sbjct: 62 WDISSAGHISAGDTSLHTVRKELEEELGIILPEDAFELLFVFLQRVALNDGKFINNEYND 121
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
VYLVTT++P+PLEAFTLQ++EVS VKY++ EEYK L K DP+++PYD++ Y LF+ +
Sbjct: 122 VYLVTTIDPMPLEAFTLQESEVSDVKYMSIEEYKMALIKKDPAYLPYDMDKEYHFLFSSL 181
Query: 188 SQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQV 247
+RY + R TLQ QL RY V+L E+ G+SD D +AL I+AA ++D IF Q
Sbjct: 182 EKRYASDAKHRISTLQSQLSRYCPVNLTGEIGGVSDGDIKALSYTIRAAQILDRIFIEQE 241
Query: 248 WYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATK 307
SNP L WL+++ + SELD LK Y+ INKSPWS LDENEAFLTTADSA+K +
Sbjct: 242 CSSNPDLSSWLEKNGENSELDHLKLSYFRINKSPWSCLDENEAFLTTADSAIKSTKATVR 301
Query: 308 PVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
V+GW GLEY+A+FP+ KPPGANFYP DMDK EFE WKS+L E+++EDA +FFTVI+R
Sbjct: 302 SVHGWNGLEYRAAFPVIKPPGANFYPLDMDKAEFEAWKSTLNEQEKEDAIAFFTVIRR-- 359
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
+AT+ S G L+ YSEEY YL A++LL+ AGD A +PSL+R
Sbjct: 360 -------------NATDASRG----LFLRKYSEEYKPYLVDAAKLLNTAGDCADTPSLQR 402
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KA++F+SN+Y+DSD+AWIEL+S +DVTIGPYETYEDA+FGYKATFEAFIG+RD A
Sbjct: 403 LLKAKAESFVSNDYFDSDVAWIELESAIDVTIGPYETYEDALFGYKATFEAFIGVRDHVA 462
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T QV+LF LQ LE NLP+ + YKS +V A+PIRVIQLI+NSGDVKGPQTVAFNLPNDE
Sbjct: 463 TEQVRLFSGQLQTLEDNLPLADKYKSTNVKASPIRVIQLIFNSGDVKGPQTVAFNLPNDE 522
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIVK+RG++MVMLKNVS+ KF IL PIA VCI + Q+ VDF++FF H ICHECCHGIG
Sbjct: 523 RIVKERGSAMVMLKNVSQTKFDQILLPIAKVCIAESQKHYVDFEAFFAHTICHECCHGIG 582
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PH+I LPDGR+STVRLELQE HS++EEAKAD+VGLWAL +L+ + LL + L KSMYVSFL
Sbjct: 583 PHTIVLPDGRESTVRLELQECHSSLEEAKADVVGLWALHYLLDQGLLSRDLEKSMYVSFL 642
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFNW++ K F L+SD TFS++F KV AV+SL TEI+T
Sbjct: 643 AGCFRSIRFGLEEAHGKGQALQFNWIYNKGGFELNSDGTFSINFHKVRDAVKSLCTEIMT 702
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
+QA GDK AA LL KY T+T L+ L ++ + ++PVD+ P+F + +L
Sbjct: 703 VQALGDKAAAISLLSKYATVTPALERMLSRVRDAKIPVDVVPSFDVLERL 752
>gi|168054131|ref|XP_001779486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669068|gb|EDQ55662.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/770 (62%), Positives = 591/770 (76%), Gaps = 14/770 (1%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LDVLT G +TG K R VH GDYHR V+ W+F ESTQEL+LQ+RAD KDSWPG+W
Sbjct: 12 ECLDVLTAAGLRTGDVKKRHLVHADGDYHRAVHVWLFVESTQELVLQKRADCKDSWPGLW 71
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DISSAGHISAGD+SL++A+RELQEELGI LP DAFEF+F +LQ+ VIN GK+INNE+ DV
Sbjct: 72 DISSAGHISAGDTSLLTARRELQEELGITLPADAFEFLFDYLQECVINGGKYINNEYNDV 131
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
YLVT ++ IP+EAFTLQ+TEVSAVKY+ +++Y++ + K+D S+VP DV+GGY LF+ +
Sbjct: 132 YLVTLVDHIPVEAFTLQETEVSAVKYMKWQDYEDAVRKEDSSYVPCDVDGGYSALFSALR 191
Query: 189 QRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVW 248
+RY+ +T + LQ + RY V ++ E GLS D AL I+AA ++D IF Q W
Sbjct: 192 RRYEVDTSAKLEELQMHINRYVPVEIHGETTGLSKGDLLALSDTIRAAKLLDRIFLEQEW 251
Query: 249 YSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKP 308
+NP L+D L+ + SELD+LK+ YYLINKSPWS LDEN+AFLTTADSA+++ A
Sbjct: 252 ATNPALKDSLQAASGKSELDRLKFAYYLINKSPWSILDENDAFLTTADSAIQIAEGAVDE 311
Query: 309 VNGWKG-LEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS 367
W G + Y+A+FP+ K PGANFYP DMDK EF+ WK L + QQ DATSFFT I+R
Sbjct: 312 SVTWGGKVRYRAAFPVEKAPGANFYPVDMDKEEFQAWKDGLDKGQQADATSFFTTIRR-- 369
Query: 368 EFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKR 427
SG I DA ++DL VPYS+EY + L AS LLHKAGD A +PSLKR
Sbjct: 370 --------SGDIHDADG---AKVHDLKIVPYSKEYATILKEASYLLHKAGDSAENPSLKR 418
Query: 428 LLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
LL +KADAFLSN+YY+SDIAW+ELDS LDVTIGPYETYED +FGYKATFEAFIGIRDD+A
Sbjct: 419 LLKAKADAFLSNDYYESDIAWMELDSPLDVTIGPYETYEDGLFGYKATFEAFIGIRDDEA 478
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
T ++KLF NLQ +E NLPMD+ YKSK V +PIRVIQL+YNSGDVKGPQTVAFNLPND+
Sbjct: 479 TQRLKLFSHNLQEMEDNLPMDDEYKSKTVTFSPIRVIQLLYNSGDVKGPQTVAFNLPNDD 538
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
RIVK+RGT+MVMLKN+S+AKF IL PIA+VC+ Q+ VDFDSFFTH ICHECCHGIG
Sbjct: 539 RIVKERGTAMVMLKNISQAKFDYILLPIANVCVEASQRGAVDFDSFFTHTICHECCHGIG 598
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PH+I PDGR STVRLELQE++SA+EEAKADIVGLWAL FL+ + LLP+SL +MYVSFL
Sbjct: 599 PHNIVTPDGRASTVRLELQEVYSAIEEAKADIVGLWALHFLVDKGLLPRSLENTMYVSFL 658
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
AGCFRS+RFGLEE+HGKGQALQFN++ EK F H D TFSVD+ KV VE LS ILT
Sbjct: 659 AGCFRSIRFGLEEAHGKGQALQFNFILEKGGFSYHPDGTFSVDYTKVRQCVEDLSRLILT 718
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
I+A+GDK A LL KY +T L+ + L++VQVPVDI PTF ++ +
Sbjct: 719 IEAKGDKAGAEALLAKYAALTPQLQQSFDALQDVQVPVDIFPTFKLLDDI 768
>gi|449529327|ref|XP_004171651.1| PREDICTED: nudix hydrolase 3-like, partial [Cucumis sativus]
Length = 459
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/458 (76%), Positives = 400/458 (87%), Gaps = 2/458 (0%)
Query: 191 YKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYS 250
YK + + RSL LQKQL+RYA +SLN ELAGL+DADK AL L+I AA +DEIFYLQ+WYS
Sbjct: 1 YKVDNVARSLALQKQLQRYASISLNVELAGLTDADKGALDLIINAAATIDEIFYLQIWYS 60
Query: 251 NPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVN 310
NP LRDWL++HA S LDKLK YYLINK+PWSSLDENEA+LTTADSA+KLLP+AT+PV+
Sbjct: 61 NPCLRDWLEKHATTSHLDKLKRAYYLINKTPWSSLDENEAYLTTADSAIKLLPEATRPVS 120
Query: 311 GWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFN 370
GWKGLEYKA+FPL KPPGANFYPPDMDKMEF+ WK SLTE QQ + FF+VI RR +
Sbjct: 121 GWKGLEYKAAFPLQKPPGANFYPPDMDKMEFKQWKDSLTEDQQNIVSGFFSVI-RRYSDS 179
Query: 371 LDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLH 430
+D+TN G DLY+VP+S+EY+S+L++A+ELLHKAGD+ SSPSLKR LH
Sbjct: 180 SSDLSICSSLDSTNRLEGPTNDLYNVPFSQEYSSFLSKAAELLHKAGDITSSPSLKRFLH 239
Query: 431 SKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ 490
S+ADAFLSN+YY+SDIAW+ELDS+LDVTIGPYETYED +FGYKATFEAFIGIRDDK TAQ
Sbjct: 240 SRADAFLSNDYYESDIAWMELDSKLDVTIGPYETYEDTLFGYKATFEAFIGIRDDKGTAQ 299
Query: 491 VKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIV 550
VKLFGDNLQVLEQNLPMDNAYKSKDV AAPIRV+QL+YN+G VKG Q+VAFNLPNDERIV
Sbjct: 300 VKLFGDNLQVLEQNLPMDNAYKSKDVSAAPIRVVQLLYNAG-VKGTQSVAFNLPNDERIV 358
Query: 551 KDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHS 610
K+RGTSMVMLKNVSEAKF IL+PIADVCI EQ+E VDFDSFFT ICHECCHGIGPH+
Sbjct: 359 KERGTSMVMLKNVSEAKFNLILKPIADVCIANEQREFVDFDSFFTFAICHECCHGIGPHT 418
Query: 611 ITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFL 648
ITLP+G++STVRLELQELHSA+EEAKADIVGLWAL+FL
Sbjct: 419 ITLPNGKKSTVRLELQELHSALEEAKADIVGLWALRFL 456
>gi|15912329|gb|AAL08298.1| At1g79690/F20B17_11 [Arabidopsis thaliana]
Length = 331
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 255/330 (77%), Positives = 292/330 (88%)
Query: 449 IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMD 508
++LDS+LD+TIGPYETYED IFGYKATFE FIGIRDDKATA +KLFGDNL++LE NLP++
Sbjct: 1 MDLDSKLDITIGPYETYEDEIFGYKATFETFIGIRDDKATADLKLFGDNLKLLEDNLPLE 60
Query: 509 NAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF 568
+ YKS DV AAPIRVIQLIYNSGDVKGPQTVA+NLPNDE+IVKDRGTSMVMLKNV EAKF
Sbjct: 61 SVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNLPNDEKIVKDRGTSMVMLKNVQEAKF 120
Query: 569 KNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQEL 628
++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIGPH+ITLP G+ STVR ELQE+
Sbjct: 121 EHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTITLPGGQTSTVRKELQEV 180
Query: 629 HSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQAL 688
HSAMEEAKADIVGLWALKFLI + LL KS+V+SMY SFLAGCFRS+RFGL E+HGKGQAL
Sbjct: 181 HSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYFSFLAGCFRSIRFGLTEAHGKGQAL 240
Query: 689 QFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMT 748
QFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+T
Sbjct: 241 QFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTIT 300
Query: 749 QPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
PLK AL+ LE V+VPVDI+PTF L+
Sbjct: 301 GPLKTALENLERVKVPVDISPTFPLAEALM 330
>gi|383458548|ref|YP_005372537.1| hypothetical protein COCOR_06584 [Corallococcus coralloides DSM
2259]
gi|380730999|gb|AFE07001.1| hypothetical protein COCOR_06584 [Corallococcus coralloides DSM
2259]
Length = 572
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/582 (42%), Positives = 351/582 (60%), Gaps = 58/582 (9%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN-PVLRDWLK 259
TL++ R+A V + +++ L DA+K AL V++AA +MD +F Q W N +L D +K
Sbjct: 34 TLKRMTARFAPVDVKVDVSKLPDAEKRALAKVLQAARIMDPLFLGQAWAGNQTLLLDLVK 93
Query: 260 EHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKA 319
D + L K + +L+NK PWS LDE + F+
Sbjct: 94 ---DTTPLGKERLHAFLLNKGPWSRLDEAKPFIPGVP----------------------- 127
Query: 320 SFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHI 379
PKP NFYP K E E W SL E QQ AT FFT +++
Sbjct: 128 ----PKPDEGNFYPAGATKAEVEAWVKSLPEAQQHAATGFFTTLRK-------------- 169
Query: 380 VDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN 439
G SVPYS EY L A++LL +A + P+LKR L ++A AFLSN
Sbjct: 170 --------GPDGKFVSVPYSVEYQGELGMAAQLLREAAALTQQPTLKRFLETRAAAFLSN 221
Query: 440 NYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQ 499
+YY S++AW+ELD+ ++ TIGPYE YED F YKA FEAFIG+RDD T ++ F LQ
Sbjct: 222 DYYASEVAWMELDASVEPTIGPYEVYEDGWFNYKAAFEAFIGVRDDAETQKLAKFSAELQ 281
Query: 500 VLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSM 557
LE NLP++ + ++ + A APIRVI IY+SGD +G QT AFNLPNDER+ ++GT
Sbjct: 282 ELENNLPIEASLRNPKLGALAPIRVINSIYSSGDGNRGVQTAAFNLPNDERVAAEKGTKR 341
Query: 558 VMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGR 617
VMLKN+ EAKF+ +L PIA V + + ++ V FD+FFTH + HE HG+GPH++T+ G+
Sbjct: 342 VMLKNIQEAKFQRVLLPIAKVALPAKDRKDVSFDAFFTHILMHELMHGLGPHNVTV-AGK 400
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG 677
Q+TVR LQ SA+EEAKADI GLWAL+ L+ + L K L ++MY +FLA FRS+RFG
Sbjct: 401 QTTVRQALQASSSAIEEAKADISGLWALQRLVDKGTLDKDLQRTMYTTFLASAFRSIRFG 460
Query: 678 LEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
++E+HGKG ALQ N + A +++D TF V DK++ ++ SL+ +++T+QA+GD+ AA
Sbjct: 461 IDEAHGKGIALQLNHFLDTGAVKVNADGTFEVVPDKMQASITSLTNQLMTLQAQGDRAAA 520
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
LL K + ++ L++L+N VPVDI P + + L++
Sbjct: 521 EALLAKQGVVRPSVQKVLERLKN--VPVDIEPRYVTADSLVK 560
>gi|115376254|ref|ZP_01463495.1| hypothetical protein STIAU_8155 [Stigmatella aurantiaca DW4/3-1]
gi|310823981|ref|YP_003956339.1| hypothetical protein STAUR_6755 [Stigmatella aurantiaca DW4/3-1]
gi|115366752|gb|EAU65746.1| hypothetical protein STIAU_8155 [Stigmatella aurantiaca DW4/3-1]
gi|309397053|gb|ADO74512.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 571
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/580 (42%), Positives = 352/580 (60%), Gaps = 55/580 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
LQ+ R+A V L +L+ L DA+K AL I+AA +MD +F Q W N L L +
Sbjct: 34 LQRMTARFAPVDLKVDLSKLPDAEKRALAKTIQAARLMDVLFLRQAWAGNESLLLELLD- 92
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D + L + + +L+NK PWS LDE AF+
Sbjct: 93 -DTTPLGRARLQAFLLNKGPWSRLDEGRAFIP--------------------------GV 125
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P P NFYP K + + W +L + QQ DAT F+T ++R + G I+
Sbjct: 126 PPESPASGNFYPAGTTKEDVDRWVKTLADSQQRDATGFYTTLRRAPD--------GKII- 176
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+VPYS EY L++A++LL +A + P+L+ L ++ADAFLSN+Y
Sbjct: 177 -------------TVPYSVEYQGELSQAAQLLREAASLTKQPTLQAFLSARADAFLSNDY 223
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y S++AW+ELD+ ++ TIGPYE YED F YKA FEAFI +RDD T ++ F LQ L
Sbjct: 224 YASEVAWMELDATIEPTIGPYEVYEDNWFNYKAAFEAFITLRDDAETQKLSRFSGELQWL 283
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMVM 559
E +LP+D ++ + A API V+ +++SGD +G QT AFNLPNDER+ ++G+ VM
Sbjct: 284 EDHLPIDAKMRNAKLGALAPISVVNSVFSSGDANRGVQTAAFNLPNDERVTAEKGSKRVM 343
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKNV EAKF+ +L+PIA V + + ++ V F++FFTH + HE HG+GPH+IT+ G+Q+
Sbjct: 344 LKNVQEAKFQRVLKPIAQVALPAKDRKDVSFEAFFTHILMHELMHGLGPHNITV-GGKQT 402
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQ SA EEAKADI GLWAL+ L+ + +L KSL ++MY +FLA FRS+RFG++
Sbjct: 403 TVRQALQVSSSATEEAKADISGLWALQQLVNKGVLDKSLERTMYTTFLASAFRSIRFGVD 462
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
E+HGKG ALQ N + A +++D TFSV +K++ +VESL+ +++ +Q RGD+ A
Sbjct: 463 EAHGKGVALQLNHFLDTGAVKVNADGTFSVVPEKIQASVESLTKQLMELQGRGDRAQAEA 522
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
LL+K + +K L KL+N VPVDIAP F ++LLQ
Sbjct: 523 LLEKQGVVRPEVKRVLDKLQN--VPVDIAPRFVTADQLLQ 560
>gi|94971252|ref|YP_593300.1| MutT/nudix family protein [Candidatus Koribacter versatilis
Ellin345]
gi|94553302|gb|ABF43226.1| MutT/nudix family protein [Candidatus Koribacter versatilis
Ellin345]
Length = 599
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/589 (41%), Positives = 360/589 (61%), Gaps = 64/589 (10%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L++ R+A L + + LS D++AL +++AA V++++F Q W N L W K
Sbjct: 64 LRQMGARFAPTELKIDPSSLSPGDQKALAKLVEAAKVINDVFLTQYWKGNHAL--WTKLQ 121
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
AD +EL + + Y+ INKSPWS+LD AFL PD
Sbjct: 122 ADTTELGRERARYFWINKSPWSALDGLTAFL----------PDV---------------- 155
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P K PGANFYP DM + EFE W +L EK QE A FFTVI+R
Sbjct: 156 PAKKLPGANFYPEDMTREEFEAWVKTLPEKDQESAKGFFTVIQR---------------- 199
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
G+ L VP+SE Y + LTR + LL +A D+ + SLK+ L+S+ADAF SN+Y
Sbjct: 200 ------GADKKLTIVPFSEAYKADLTRCASLLKEAADLTDNASLKKFLNSRADAFASNDY 253
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y SD+ W++LD+ +D TIGPYETY D IFGYKA++EA+I +RDD T ++ F +LQ +
Sbjct: 254 YQSDMDWMDLDAPIDPTIGPYETYNDEIFGYKASYEAYITVRDDAETKKLSSFSAHLQEI 313
Query: 502 EQNLPMDNAYKSKDV-IAAPIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMVM 559
E NLP+D Y++ + AAPIRV+ ++ +GD G QT A+NLPND+R+V +G+ VM
Sbjct: 314 ENNLPLDPKYRNPKLGAAAPIRVVNEVFAAGDGDHGVQTAAYNLPNDDRVVAQKGSKRVM 373
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKNV AKF ++L PI+ ++ + Q+ VDFD FFTH + HE CHG+GPH IT+ +G+++
Sbjct: 374 LKNVQAAKFNSVLIPISKQVLKADAQQYVDFDLFFTHILTHELCHGLGPHEITV-NGKKT 432
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLI--GRDLLPKSLV-------KSMYVSFLAGC 670
R+E++EL+SA+EEAKAD+ GL+AL++++ +D+ S + K +Y ++LA
Sbjct: 433 NPRIEIKELYSALEEAKADVTGLFALQYMLDHAKDMGLDSTLKIDNDSEKKLYTTYLASS 492
Query: 671 FRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQA 730
FR++RFG E+HGKG A+Q ++L ++ AF+ + D TFSVD+ K++ AV L +LT++A
Sbjct: 493 FRTLRFGTHEAHGKGMAVQVSYLMKRGAFVANPDGTFSVDYKKIKDAVRDLDKIMLTLEA 552
Query: 731 RGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
GD LL Y T+ ++ A+ K+ + VPVDI P + L +
Sbjct: 553 EGDYAGTKKLLDDYGTVPAEMQKAIAKMSS--VPVDIEPLYVTAKALTK 599
>gi|442323616|ref|YP_007363637.1| hypothetical protein MYSTI_06680 [Myxococcus stipitatus DSM 14675]
gi|441491258|gb|AGC47953.1| hypothetical protein MYSTI_06680 [Myxococcus stipitatus DSM 14675]
Length = 569
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/581 (40%), Positives = 349/581 (60%), Gaps = 58/581 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWY-SNPVLRDWLKE 260
LQ+ R+A V L+ +L L D ++ AL +++A+ +MD +F Q W S VL ++
Sbjct: 34 LQRLTARFAPVELSVDLKALPDNERRALGRIVQASQLMDALFLRQRWAGSETVLLGLVR- 92
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
D + L + + ++++K PW+SLDE FL +
Sbjct: 93 --DETPLGRARLHAFVLDKGPWNSLDEGRPFLPGVPA----------------------- 127
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP NFYP K E E W SL E Q ++AT F+T I+R
Sbjct: 128 ----KPEAGNFYPAGATKAEVESWVKSLPEAQAKEATGFYTTIRR--------------- 168
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
G+ SVPYS EY L +A+ L +A + P+LK L ++ADAFLSN+
Sbjct: 169 -------GTDGKFISVPYSVEYQGELAQAAALFREAASLTKQPTLKAFLTARADAFLSND 221
Query: 441 YYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
YY S++AW++LD+ ++ T+GPYE YED F YKA FEAF+G+RDD T ++ F D+LQ
Sbjct: 222 YYASEVAWMKLDASIEPTVGPYEVYEDGWFNYKAAFEAFVGLRDDAETTKLAKFSDHLQD 281
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMV 558
LE NLP+D +S + A APIRV+ +++SGD +G QT A+NLPNDER+ + G+ V
Sbjct: 282 LENNLPIDPKMRSAKLGALAPIRVVNSLFSSGDANRGVQTAAYNLPNDERVTEAMGSKRV 341
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
MLKNV EAKF+ +L PIA V + + Q+ V FD+FFTH + HE HG+GPH+IT+ DG+
Sbjct: 342 MLKNVQEAKFQRVLLPIAKVALTAKDQQDVAFDAFFTHILMHELMHGLGPHNITV-DGKA 400
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TVR LQ SA+EEAKADI GLWAL+ L+ ++ KS+ ++MY +FLA FRS+RFG+
Sbjct: 401 TTVRQALQVASSALEEAKADISGLWALQRLMDTGVIDKSMARTMYTTFLASSFRSIRFGI 460
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+E+HGKG ALQ N+ + A +++D TFSV +K++ +V SL+ ++ IQ +GD++AA
Sbjct: 461 DEAHGKGVALQLNYFLDTGAVKVNADGTFSVVPEKMQQSVTSLTKLLMEIQGKGDRKAAE 520
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
LL K + ++ L++L++ VPVDI P + L++
Sbjct: 521 ALLAKMGVVRPSVRKVLERLKD--VPVDIEPHYVTAETLVR 559
>gi|427400939|ref|ZP_18892177.1| hypothetical protein HMPREF9710_01773 [Massilia timonae CCUG 45783]
gi|425720118|gb|EKU83044.1| hypothetical protein HMPREF9710_01773 [Massilia timonae CCUG 45783]
Length = 574
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/586 (40%), Positives = 348/586 (59%), Gaps = 55/586 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L +R+A V L A+++ LS D+ A+ +I+AA ++D + Q W N L + L++
Sbjct: 36 LHAMAKRFAPVELRADVSHLSKGDRAAIAKLIEAAKIVDTLQLRQRWAHNEALWNALRK- 94
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D + L + + + +NK PWS+LD N +F+ + +++
Sbjct: 95 -DTTPLGRARLDAFWLNKGPWSNLDNNASFMPAEYAGIRI-------------------- 133
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P KP GANFYP K E W + L +Q+++A FFTVI+
Sbjct: 134 PAQKPEGANFYPEGATKASLENWMNGLAPEQKKEAQWFFTVIR----------------- 176
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
G L +V Y++EY L + ++LL +A + SLK+ L+ +ADAFLSN+Y
Sbjct: 177 -----TGPDGKLRTVKYADEYRPELEQLAKLLREAAAATDNASLKKFLNLRADAFLSNDY 231
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW++LD+ +DVTIGPYETY D +FGYKA FEA++ IRD + TA++ FG +LQ L
Sbjct: 232 LASDFAWMDLDAPVDVTIGPYETYNDELFGYKAAFEAYVSIRDPQETAKLDFFGKHLQEL 291
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
E NLP+D Y++ V A AP+ V+ +Y +GD G QT A+NLPNDER++++RG+ VM
Sbjct: 292 EDNLPLDKQYRNPKVGAIAPMVVVNEVYGAGDGNMGVQTAAYNLPNDERVIRERGSKRVM 351
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKNV +AKF + L PI+ + Q+ +DFDSFFTH + HE HG+GPH T DG+ S
Sbjct: 352 LKNVQQAKFASTLTPISKQVLGPADQKDLDFDSFFTHILAHEIMHGLGPHH-TKKDGKDS 410
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS 673
T R +L+E +S +EEAKADI GLWAL++++ + LL +L + +Y +FLA FR+
Sbjct: 411 TPRQDLKETYSTIEEAKADITGLWALQYMMDKGLLKDTLGQGAAAERKLYNTFLASSFRT 470
Query: 674 VRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGD 733
+ FGL SH +G A+Q N+L +K F+ H D TFSVDF K++GAV L E LTI+A GD
Sbjct: 471 LHFGLGSSHARGMAIQVNYLLDKGGFVAHEDGTFSVDFKKIKGAVIDLDREFLTIEATGD 530
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
A ++ +Y + ++ AL KL+ VP DI P F + LL+
Sbjct: 531 YARAKAMMDRYVVIRPEVRKALDKLK--AVPNDIRPAFVTADSLLK 574
>gi|108760543|ref|YP_634185.1| hypothetical protein MXAN_6050 [Myxococcus xanthus DK 1622]
gi|108464423|gb|ABF89608.1| conserved domain protein [Myxococcus xanthus DK 1622]
Length = 639
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/581 (41%), Positives = 351/581 (60%), Gaps = 58/581 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN-PVLRDWLKE 260
LQ+ R+A V L +L L ++++ AL +++A+ +MD +F Q W N P+L D ++
Sbjct: 110 LQRLTARFAPVELRVDLKALPESERRALARIVQASKLMDTLFLRQRWAGNEPLLLDLVQ- 168
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
D + L + + +L++K PW+SLDE F+ +
Sbjct: 169 --DTTPLGRARLQAFLLDKGPWNSLDEARPFIPGVPA----------------------- 203
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP ANFYP + E E W SL E QQ++AT F+T I+R
Sbjct: 204 ----KPASANFYPAGATQAEVEAWVKSLPEAQQKEATGFYTTIRR--------------- 244
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
G+ +VPYS EY L A+ LL +A + P+LK L S+ADAFLSN+
Sbjct: 245 -------GTDGRFITVPYSVEYQGELALAAALLREAAALTQQPTLKAFLTSRADAFLSND 297
Query: 441 YYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
YY S++AW+ELD+ ++ TIGPYE YED F YKA FEAF+G+RDD T ++ F LQ
Sbjct: 298 YYASEVAWMELDASIEPTIGPYEVYEDEWFNYKAAFEAFVGLRDDAETQKLAKFSGQLQG 357
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMV 558
LE NLP+D ++ + A APIRVI +++SGD +G QT AFNLPNDER+ + G+ V
Sbjct: 358 LENNLPIDPKLRNPKLGALAPIRVINSLFSSGDGNRGVQTAAFNLPNDERVSEKMGSKRV 417
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
MLKNV EAKF+ +L PIA V + Q+ V FD+FFTH + HE HG+GP +IT+ G+
Sbjct: 418 MLKNVQEAKFERVLLPIAKVALTPADQKDVSFDAFFTHILMHELMHGLGPSNITV-GGKA 476
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TVR ELQ SA+EEAKADI GLWAL+ L+ ++ KSL ++MY +FLA FRS+RFG+
Sbjct: 477 TTVRKELQSASSAIEEAKADISGLWALQRLVDTGVIDKSLERTMYTTFLASAFRSIRFGV 536
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+E+HGKG A+Q N+ + A +++D TFSV K++ AV SL+ +++ IQ RGD++AA
Sbjct: 537 DEAHGKGIAVQLNYFLDTGAVKVNADGTFSVVPAKMKKAVISLTKQLMEIQGRGDRKAAE 596
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
LL K + P++ L++L++ VPVDI P + +L++
Sbjct: 597 ALLAKLGVVRPPVQRVLERLKD--VPVDIEPRYVTAEELVR 635
>gi|338532855|ref|YP_004666189.1| hypothetical protein LILAB_16040 [Myxococcus fulvus HW-1]
gi|337258951|gb|AEI65111.1| hypothetical protein LILAB_16040 [Myxococcus fulvus HW-1]
Length = 564
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/581 (41%), Positives = 353/581 (60%), Gaps = 58/581 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN-PVLRDWLKE 260
LQ+Q R+A V L +L L +++++AL +++A+ +MD +F Q W N P+L D +K
Sbjct: 35 LQRQTARFAPVELRVDLKALPESERQALARIVQASKLMDTLFLRQRWAGNEPLLLDLVK- 93
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
D + L + + +L++K PWSSLDE F+ +
Sbjct: 94 --DETPLGRARLHAFLLDKGPWSSLDEARPFIPGVPA----------------------- 128
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP ANFYP + + W SL E +Q++AT F+T I+R
Sbjct: 129 ----KPASANFYPAGATQAQVAAWVKSLPEARQKEATGFYTTIRR--------------- 169
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
G+ +VPYS EY L RA+ LL +A + P+LK L S+ADAFLSN+
Sbjct: 170 -------GTDGRFIAVPYSVEYQGELARAAALLREAAALTKQPTLKAFLTSRADAFLSND 222
Query: 441 YYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
YY S++AW+ELD+ ++ TIGPYE YED F YKA FEAF+G+RDD T ++ F LQ
Sbjct: 223 YYASEVAWMELDASIEPTIGPYEVYEDEWFNYKAAFEAFVGLRDDAETRKLAKFSGQLQG 282
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMV 558
LE NLP+D ++ + A APIRVI +++SGD +G QT AFNLPNDER+ + G+ V
Sbjct: 283 LEDNLPIDPKLRNAKLGALAPIRVINSLFSSGDGNRGVQTAAFNLPNDERVSEKMGSKRV 342
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
MLKNV EAKF+ +L PIA V + Q+ V F++FFTH + HE HG+GP +IT+ G+
Sbjct: 343 MLKNVQEAKFERVLLPIAKVALTPADQKDVSFEAFFTHILMHELMHGLGPSNITV-GGKA 401
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TVR ELQ SA+EEAKADI GLWAL+ L+ ++ KSL ++MY +FLA FRS+RFG+
Sbjct: 402 TTVRKELQASSSAIEEAKADISGLWALQRLVDTGVIDKSLERTMYTTFLASAFRSIRFGV 461
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+E+HGKG A+Q N + A +++D TFSV K++ AV SL+ +++ +Q RGD++AA
Sbjct: 462 DEAHGKGIAVQLNHFLDTGAVKVNADGTFSVVPVKMKPAVISLTKQLMELQGRGDRKAAE 521
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
LL K + P++ L++L++ VPVDIAP + +L++
Sbjct: 522 ALLAKQGVVRPPVQRVLERLKD--VPVDIAPRYVTAEELVR 560
>gi|116620659|ref|YP_822815.1| MutT/NUDIX family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223821|gb|ABJ82530.1| MutT/NUDIX family protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 543
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/572 (42%), Positives = 346/572 (60%), Gaps = 56/572 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L++ R+A V+L + + LS D++AL ++ AA V++ +F Q+W N L L++
Sbjct: 20 LKEMSARFAPVTLKYDSSKLSPGDRQALAKLVDAAHVLNTLFMDQLWSGNRELYARLQK- 78
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D + L K + Y+ +NK PWS LD + AF+
Sbjct: 79 -DTTPLGKQRLHYFWLNKGPWSDLDAHAAFI--------------------------PGV 111
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P KPPGANFYP DM + EFE W +L+ +E A FF+VI+R
Sbjct: 112 PERKPPGANFYPEDMTREEFEAWVKTLSPSAREQAIGFFSVIRR---------------- 155
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
G+ L +PYS+ Y + L +A+ LL +A + + SLK+ L +ADAFLSN+Y
Sbjct: 156 ------GAKRQLTQIPYSKAYEADLKKAAALLREAAALTGNASLKKFLSLRADAFLSNDY 209
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y SDIAW++LD+ LD+TIGPYETY D +FGYKA FEA+I IRD++ T ++K +LQ +
Sbjct: 210 YASDIAWMDLDAPLDITIGPYETYNDELFGYKAGFEAYITIRDEEETNKLKTVAAHLQEV 269
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMVM 559
E NLP+D Y++ + A APIRV+ +Y SGD G +T AFNLPNDER++ +G++ +M
Sbjct: 270 ENNLPIDARYRNPKLGASAPIRVVNEVYASGDGAHGVRTAAFNLPNDERVISQKGSARIM 329
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN+ EAKF L PI+ + K QE + F+ FFTH + HE HGIGPH I + GR +
Sbjct: 330 LKNIQEAKFAANLIPISAHLLPKAAQEDLSFNYFFTHILAHELSHGIGPHQIQVA-GRAT 388
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLL-PKSLVKSMYVSFLAGCFRSVRFGL 678
T R EL+EL+SA+EEAKADI GL+ L++L L+ + + +Y +FLA FRSVRFG+
Sbjct: 389 TPRQELKELYSAIEEAKADITGLFMLEYLYDHKLMNGPNYERQLYTTFLASAFRSVRFGV 448
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
E+HGKG ALQFN+L +K AF+++ D TF+VD K++ V L+ ++LTI+A G+ AA
Sbjct: 449 TEAHGKGMALQFNYLTDKGAFVVNPDGTFTVDVAKMKTGVRDLTHDLLTIEAEGNYAAAK 508
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPT 770
+L + ++ AL L+ VP DI PT
Sbjct: 509 KMLDTLAVIRPAMQRALDGLKT--VPTDIDPT 538
>gi|405355889|ref|ZP_11025001.1| Nudix hydrolase 3 [Chondromyces apiculatus DSM 436]
gi|397091161|gb|EJJ21988.1| Nudix hydrolase 3 [Myxococcus sp. (contaminant ex DSM 436)]
Length = 564
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/580 (42%), Positives = 345/580 (59%), Gaps = 56/580 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
LQ+ R+A V L +L L D ++ AL +++A+ +MD +F Q W N L L
Sbjct: 35 LQRLTARFAPVELRVDLTALPDTERRALARIVQASKLMDALFLRQRWAGNETLL--LDLL 92
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D + L + + +L++K PW+SLDE FL +
Sbjct: 93 HDTTPLGRARLQAFLLDKGPWNSLDEARPFLPGVPA------------------------ 128
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP ANFYP K E E W SL E QQ++AT F+T I+R
Sbjct: 129 ---KPEAANFYPAGATKAEVEAWVKSLPEAQQKEATGFYTTIRR---------------- 169
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
G +VPYS EY L +A+ LL +A + P+LK L S+ADAFLSN+Y
Sbjct: 170 ------GPDGRFITVPYSVEYQGELAQAAALLREAAALTQQPTLKAFLTSRADAFLSNDY 223
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y S++AW+ELD+ ++ TIGPYE YED F YKA FEAF+G+RDD T ++ F LQ L
Sbjct: 224 YASEVAWMELDASVEPTIGPYEVYEDEWFNYKAAFEAFVGLRDDAETQKLAKFSGQLQGL 283
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMVM 559
E +LP++ ++ + A APIRVI +++SGD +G QT AFNLPNDER+ + G+ VM
Sbjct: 284 EDHLPINPKMRNAKLGALAPIRVINSLFSSGDGNRGVQTAAFNLPNDERVSEKMGSKRVM 343
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKNV EAKF+ +L PIA V + + Q+ V FD+FFTH + HE HG+GP +IT+ G+ +
Sbjct: 344 LKNVQEAKFERVLLPIAKVALTPQDQKDVSFDAFFTHILMHELMHGLGPSNITV-GGKAT 402
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR ELQ SA+EEAKADI GLWAL+ L+ ++ KSL ++MY +FLA FRS+RFG++
Sbjct: 403 TVRKELQSASSAIEEAKADISGLWALQRLVDTGVIDKSLERTMYTTFLASAFRSIRFGID 462
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
E+HGKG ALQ N + A +++D TFSV K++ +V SL+ +++ IQ RGD++AA
Sbjct: 463 EAHGKGIALQLNHFLDTGAVKVNADGTFSVVPAKMKPSVVSLTKQLMEIQGRGDRKAAEA 522
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
LL K + P++ L++L+ VPVDI P + +L++
Sbjct: 523 LLAKQGVVRPPVQRVLERLQG--VPVDIEPRYVTAEELVR 560
>gi|444911293|ref|ZP_21231468.1| MutT/NUDIX family protein [Cystobacter fuscus DSM 2262]
gi|444718051|gb|ELW58867.1| MutT/NUDIX family protein [Cystobacter fuscus DSM 2262]
Length = 562
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/578 (39%), Positives = 340/578 (58%), Gaps = 56/578 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L++ R+A V + +++ L ++++ AL +++AA +MD +F Q W N L L
Sbjct: 37 LKRMTARFAPVDIQVDVSKLPESERRALAKILQAARIMDPLFMRQAWAGNETL--LLSLL 94
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D S L K + +L+NK PWS LD N F+ + KP+ G
Sbjct: 95 QDTSALGKERLHAFLLNKGPWSRLDHNAPFVPGVPA---------KPLEG---------- 135
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
NFYP + E E W SL E QQ AT FFT ++R
Sbjct: 136 --------NFYPAGATQAEVETWVRSLPEAQQRQATGFFTTVRR---------------- 171
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
G + SVPYS EY L++A+ LL +A ++ + P+L+ L +A +FL+N+Y
Sbjct: 172 ------GPDGNFISVPYSVEYQGELSQAARLLLEAAELTTQPTLRAFLTQRAASFLNNDY 225
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y S++AW++LD+ ++ TIGPYE YED F YKA FEAFI +RDD T ++ F LQ L
Sbjct: 226 YPSEVAWMDLDASIEPTIGPYEVYEDEWFNYKAAFEAFITVRDDTETQKLAKFSGELQEL 285
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMVM 559
E LP++ ++ + A APIRV+ +++SGD +G QT A+NLPNDER+ ++GT VM
Sbjct: 286 ENALPIEPKLRNPRLGALAPIRVVNSLFSSGDGNRGVQTAAYNLPNDERVAAEKGTKRVM 345
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN+ EAKF+ +L PIA V + + ++ V FD+FFTH + HE HG+GPH+IT+ +G+Q+
Sbjct: 346 LKNIQEAKFQRVLLPIAQVALTPKDRKDVSFDAFFTHILMHELMHGLGPHNITV-EGKQT 404
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQ S +EEAKAD+ GLWAL+ L+ + ++ K + ++MY +FLA FRS+RFG
Sbjct: 405 TVRQALQAASSPLEEAKADVSGLWALQRLVDKGVIGKEMERTMYTTFLASMFRSIRFGTS 464
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
E+HGKG A+ N + A +++ D TFSV +K+ +V +L+ +I+ +QA G++ AA
Sbjct: 465 EAHGKGIAVLLNHFLDTGAVVVNKDGTFSVVKEKIRESVTALTKQIMELQAAGNRAAAES 524
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
LL+ + +K L KLEN VPVDI P + + L
Sbjct: 525 LLETRGVVRPEVKRVLDKLEN--VPVDIEPRYVTADTL 560
>gi|445498890|ref|ZP_21465745.1| dipeptidyl-peptidase III [Janthinobacterium sp. HH01]
gi|444788885|gb|ELX10433.1| dipeptidyl-peptidase III [Janthinobacterium sp. HH01]
Length = 566
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/585 (41%), Positives = 343/585 (58%), Gaps = 55/585 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L K +RYA V+L A+ + LS DK+A+ +I+AA ++D + Q W N L W
Sbjct: 27 LDKMTKRYAPVALTADTSKLSAGDKKAIAKLIEAAKIVDVLQLRQRWSGNEAL--WAALQ 84
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D + L K + Y+ +NK PWS LD++++FL + + +
Sbjct: 85 KDTTPLGKARLNYFWLNKGPWSILDDHQSFLPAELAGI--------------------AI 124
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P KP NFYP K E W ++L K +E A FFT I++ +
Sbjct: 125 PAKKPEAGNFYPEGAGKQALESWMNALPAKDKEQAQWFFTTIRKNA-------------- 170
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
A SV V YS+EY LT+A+ LL +A + SLK+ L +A+AFLSN+Y
Sbjct: 171 AGQFSV--------VKYSDEYKPELTKAAALLKQAAADTDNASLKKFLELRAEAFLSNDY 222
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW++LD+ +D+TIGPYETY D +FGYKA FEA++ IRD K T ++ F ++Q L
Sbjct: 223 LASDFAWMDLDAPVDITIGPYETYNDELFGYKAAFEAYVNIRDQKETQKLDFFAKHMQEL 282
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
E NLP+D Y++ V A AP+ V+ +Y +GD G QT A+NLPNDERI+ RG+ VM
Sbjct: 283 EDNLPLDAKYRNPKVGALAPMVVVNQVYGAGDGNMGVQTAAYNLPNDERIISQRGSKRVM 342
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKNV EAKFK+ L PI+ + ++ Q+ VDFDSFFTH + HE HG+GPH IT +G +S
Sbjct: 343 LKNVQEAKFKSTLTPISKLVLKPADQKDVDFDSFFTHILAHEITHGLGPH-ITKNNGAES 401
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS 673
T R +L+E ++ +EEAKADI GL+AL +++ + L +L + +Y +FLA FR+
Sbjct: 402 TPRQDLKEAYATIEEAKADITGLYALAYMMDKGQLAGTLGQGAVAERKLYTTFLASAFRT 461
Query: 674 VRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGD 733
+ FGL +SH +G A+Q N++ +K FI H D TF+VDF K++ AV L E LTI+A GD
Sbjct: 462 LHFGLTDSHARGMAIQMNYILDKGGFISHGDGTFAVDFKKIKQAVIDLDREFLTIEATGD 521
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
A ++ KY + ++ AL K++ VP DI P F N LL
Sbjct: 522 YARAKDMMAKYVVIRPDVQKALDKMKT--VPNDIRPEFKTANTLL 564
>gi|182414035|ref|YP_001819101.1| hypothetical protein Oter_2218 [Opitutus terrae PB90-1]
gi|177841249|gb|ACB75501.1| conserved hypothetical protein [Opitutus terrae PB90-1]
Length = 555
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/576 (41%), Positives = 330/576 (57%), Gaps = 55/576 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L+ R+ V + +++ L + AL +++AA + D +F Q N L L
Sbjct: 33 LRAMTARFVPVEIKVDVSHLPPNELAALQKMVEAAKLFDALFLRQAAPQNEALLAQLVR- 91
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
DAS L + + Y+ IN WS LDE AFL P ++
Sbjct: 92 -DASPLGRARLHYFRINAGAWSRLDEQTAFL----------PGVSE-------------- 126
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP G NFYP D + E + W L ++ AT FFT I+R + L
Sbjct: 127 ---KPAGGNFYPVDATRDEVDRWMQQLPAAERAKATGFFTTIRRAPDGGL---------- 173
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+VPYS EY + L A+ LL +A P+LK L +A AFLSN+Y
Sbjct: 174 ------------MAVPYSVEYQNELILAARLLREAAAETKQPTLKAFLEKRATAFLSNDY 221
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y+SD+AW+ELD+ ++ TIGPYE YED F +KA FEAFI + D TA++ F +LQ L
Sbjct: 222 YESDLAWMELDATIEPTIGPYEVYEDEWFNFKAAFEAFIAVTDPAETAKLGSFSGHLQEL 281
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMVML 560
E +LP+D Y+ K +PIRV+ L + SGD +G QT AFNLPNDER+V ++G+ VML
Sbjct: 282 EDHLPIDPQYRKKLGGYSPIRVVNLAFGSGDANRGVQTAAFNLPNDERVVAEKGSKRVML 341
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
KNV EAKF+N+L PI+ + K Q V F+ FFTH + HE HG+GP +IT+ +GR++T
Sbjct: 342 KNVQEAKFENVLVPISRRVLAKADQGHVAFEPFFTHILMHELMHGLGPQTITV-NGRETT 400
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
VR E++EL+ +EEAKADI GLWAL+ L+ +L ++ ++MY +FLA FR++RFGL E
Sbjct: 401 VRSEMKELNGTLEEAKADISGLWALQHLMDHGMLDRAQERAMYTTFLASTFRTLRFGLTE 460
Query: 681 SHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLL 740
+H KG ALQ NWL + AF + D TF+VD KV+ AVESL+ I+T+QA GD L
Sbjct: 461 AHAKGMALQLNWLLDAGAFTVAQDGTFAVDLVKVKPAVESLTRAIMTLQAHGDYAGTKQL 520
Query: 741 LQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNK 776
+K + +K AL L++ +PVDI PTF K
Sbjct: 521 FEKMIVVRPEVKRALDGLKD--LPVDIEPTFVMGEK 554
>gi|373459518|ref|ZP_09551285.1| MutT/NUDIX family protein [Caldithrix abyssi DSM 13497]
gi|371721182|gb|EHO42953.1| MutT/NUDIX family protein [Caldithrix abyssi DSM 13497]
Length = 558
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/590 (39%), Positives = 358/590 (60%), Gaps = 62/590 (10%)
Query: 186 IISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYL 245
I Q+ +EN E + L++ + ++A + + + L + ++ + + +AA +MDEIF
Sbjct: 17 IACQKKEENKTE-MVKLKRMIAQFAPTEIKYDHSLLDERKQKVVENLYRAAKIMDEIFLD 75
Query: 246 QVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDA 305
QV+ N +R+ L+ +D LD+L+ Y+ I P+ L+ ++ F+
Sbjct: 76 QVYSKNFEIREQLRASSDP--LDQLRLEYFTIMFGPFDRLNHDKPFIGNT---------- 123
Query: 306 TKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKR 365
PKP GANFYPPDM + EFE W + E + TS FTVI+R
Sbjct: 124 ------------------PKPKGANFYPPDMTREEFENWLKAHPEDEAA-FTSEFTVIRR 164
Query: 366 RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSL 425
+ G +V ++PYSE Y YLTRA++ L KA + A +PSL
Sbjct: 165 Q---------DGKLV--------------AIPYSEYYKEYLTRAADYLKKAAEFADNPSL 201
Query: 426 KRLLHSKADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRD 484
K+ L +A+AFL+N+YY+SD+AW++L D ++V IGPYE YED +F YKA FEAFI +RD
Sbjct: 202 KKYLQLRAEAFLNNDYYESDLAWMDLNDHTIEVVIGPYEVYEDKLFNYKAAFEAFITLRD 261
Query: 485 DKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFN 542
+A++K F L +E+NLP+ +AYK+ + + +P+ V+Q ++++GD K G QT+AFN
Sbjct: 262 PVESAKLKKFVGYLDEMEKNLPIPDAYKNFNRGSESPMVVVQEVFSAGDTKAGVQTLAFN 321
Query: 543 LPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHEC 602
LPNDER+ + +G+ VMLKN+ EAKF +L+PIA+ + EQ LV F+ FF H + HE
Sbjct: 322 LPNDERVREAKGSKKVMLKNIHEAKFDKLLKPIAEKVLFAEQLPLVTFEGFFNHTLMHEI 381
Query: 603 CHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSM 662
HG+GP I L +GRQ+ V+ EL+E +S++EE KAD++G++ F+I + + P K +
Sbjct: 382 SHGLGPGKIVL-NGRQTEVKKELKETYSSIEECKADVLGMYNNLFMIEKGVYPPEFEKQI 440
Query: 663 YVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILH-SDDTFSVDFDKVEGAVESL 721
YV+FLAG FR++RFG+ E+HG G A+ FN+L EK A+ + V+F+K++ V L
Sbjct: 441 YVTFLAGIFRTIRFGINEAHGAGNAVIFNYLLEKGAYQFDPAAHRVKVNFEKIKDGVRDL 500
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
+ ++LTIQA+GD AA LL+ Y ++P+ + +L+ ++PVDI P F
Sbjct: 501 ANKVLTIQAQGDYMAAKNLLETYAVESEPIMIMRARLQ--ELPVDIKPIF 548
>gi|86156911|ref|YP_463696.1| MutT/nudix family protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773422|gb|ABC80259.1| MutT/nudix family protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 565
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/579 (40%), Positives = 332/579 (57%), Gaps = 56/579 (9%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
+L++ R+A V L +L+ L +++ AL +++A +MD +F QVW N L L E
Sbjct: 38 SLRRAEARFAPVDLKVDLSKLPASERTALARLVEAGRIMDALFLRQVWAGNEALLLRLVE 97
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
D S L + + +L NK PW L+E+ AFL +P+
Sbjct: 98 --DRSPLGEARLRLFLRNKGPWDRLEEDRAFLPG-------IPE---------------- 132
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP A+FYP K E E W + L ++++ A FFT ++R
Sbjct: 133 ----KPQQASFYPAGATKDEVERWAAGLAPEEKDRAMGFFTTVRR--------------- 173
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
DA L +VPYS EY L RA+ LL +A L+ L ++A AF+ N
Sbjct: 174 DAAGK-------LVAVPYSLEYQGELARAAALLREAAAATQDAGLRTFLEARAAAFVGNA 226
Query: 441 YYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
Y DSD+AW+ LDS ++ TIGPYE YED F KA FEAFIG+RDD TA+V F LQ
Sbjct: 227 YRDSDVAWMRLDSAVEPTIGPYEVYEDGWFNAKAAFEAFIGVRDDAETAKVARFAAELQG 286
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E LP+D A+K+ + A APIRVI +Y GD KG QT A+NLPNDE + + G+ V
Sbjct: 287 IEDALPIDAAFKNPKIGALAPIRVINEVYAGGDAAKGVQTAAYNLPNDEWVTRTMGSKRV 346
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
MLKNV EAKF+ +L+P+A + + V FD FFTH + HE HG+GPH T+ +G++
Sbjct: 347 MLKNVQEAKFQKVLQPVARRLLSPADRAHVAFDPFFTHILMHELVHGLGPHHATV-NGQE 405
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L E +SA+EEAKAD+ GL+AL+ L+ L + + ++Y +FL G FRS+RFGL
Sbjct: 406 VTVRAALAETYSALEEAKADVAGLFALEKLLDDGKLDRRMRDTLYPTFLCGAFRSIRFGL 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
E+HGKG A+Q NWL + A + D TF+VD K+ AV L+ EI+TIQA+GD+ AA
Sbjct: 466 NEAHGKGMAIQINWLLDHGAIVARKDGTFAVDGAKMRDAVAGLTREIMTIQAKGDRAAAK 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
+L+K + + AL ++E+ +PVDIAP F + L
Sbjct: 526 AMLEKLGVVRPEVARALARIED--LPVDIAPRFVTADAL 562
>gi|395763694|ref|ZP_10444363.1| MutT/nudix family protein [Janthinobacterium lividum PAMC 25724]
Length = 577
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 329/580 (56%), Gaps = 55/580 (9%)
Query: 208 RYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 267
RYA V+L+A++ LS D+ A+ +++AA ++D + Q W N L W D S L
Sbjct: 41 RYAPVALSADITHLSLGDRRAIAKLVEAAKLVDVLQLRQRWSGNEAL--WAALKKDKSAL 98
Query: 268 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPP 327
+ + Y+ INK PWS LD + F+ + + + + P KP
Sbjct: 99 GQARLNYFWINKGPWSVLDAHATFMPASYAGI--------------------AIPAHKPE 138
Query: 328 GANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV 387
NFYPP K E W + L+ ++ A FFT I+
Sbjct: 139 AGNFYPPGATKASLETWMNGLSADDKQQAQWFFTTIR----------------------A 176
Query: 388 GSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA 447
G ++ YS+EY LTR ++LL +A + SLK+ L +A AFL N+Y SD A
Sbjct: 177 GKDGKYQTLKYSDEYKVELTRLAKLLDEAAAATDNASLKKFLTLRAKAFLDNDYLASDFA 236
Query: 448 WIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 507
W++LDS +D+TIGPYETY D +FGYKA FEA++ IRD T ++ F ++Q LE NLP+
Sbjct: 237 WMDLDSPVDITIGPYETYNDELFGYKAAFEAYVNIRDQAETQKLNFFAKHMQELEDNLPL 296
Query: 508 DNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
D Y++ V A AP+ V+ +Y +GD QT A+NLPNDERI+ RG+ VMLKNV E
Sbjct: 297 DARYRNPKVGALAPMVVVNQVYGAGDGNMAVQTAAYNLPNDERIISARGSKRVMLKNVQE 356
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKFK L PI+ + + + Q+ VDF+SFFTH + HE HG+GPH+ T+ DG+ ST R +L
Sbjct: 357 AKFKATLMPISTLVLTADAQQDVDFNSFFTHILAHEIMHGLGPHA-TVVDGKPSTPRQDL 415
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRSVRFGLE 679
+E +S +EEAKADI GL+AL++++ + L +L + +Y +FLA FR++ FGL
Sbjct: 416 KEAYSTIEEAKADITGLYALRYMMDKGQLNDTLGQGEAAERKLYNTFLASGFRTLHFGLT 475
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+SH +G A+Q N++ +K F+ D F VDF K++ AV L E L+I+A GD A
Sbjct: 476 DSHARGMAIQINYILDKGGFVSLGDGKFGVDFGKIKQAVIDLDREFLSIEATGDYARAQA 535
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
++ KY + ++VAL K++ VP DI P F L Q
Sbjct: 536 MMSKYVVIRPEVQVALDKMK--VVPNDIRPQFVTARALQQ 573
>gi|153003401|ref|YP_001377726.1| MutT/NUDIX family protein [Anaeromyxobacter sp. Fw109-5]
gi|152026974|gb|ABS24742.1| MutT/NUDIX family protein [Anaeromyxobacter sp. Fw109-5]
Length = 560
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/572 (41%), Positives = 335/572 (58%), Gaps = 59/572 (10%)
Query: 212 VSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN-PVLRDWLKEHADASELDKL 270
V L +++ L ++++ AL L+++AA VMD +F Q W N P+L L D S L +
Sbjct: 43 VDLKVDVSRLPESERRALALLVEAARVMDALFLRQAWAGNEPLL---LVLAQDRSPLGQA 99
Query: 271 KWMYYLINKSPWSSLDENE-AFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGA 329
+ +L NK PW L+ E AFL +P+ KP A
Sbjct: 100 RLAAFLRNKGPWDRLEHGEPAFLPG-------VPE--------------------KPAAA 132
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGS 389
NFYP K E E W + L + + +AT FFT ++R + G +V
Sbjct: 133 NFYPAGATKEEVERWLAGLAPEAKAEATGFFTTVRR--------APGGGLV--------- 175
Query: 390 IYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWI 449
+VPY+ EY L RA+ELL A S +L++ L ++A AF SN+YY SD+AW+
Sbjct: 176 -----AVPYALEYQGDLARAAELLRAAAAATSDATLRKFLEARAQAFTSNDYYASDVAWM 230
Query: 450 ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDN 509
ELD+ ++ TIGPYE YED F KA FEAFIG+RDD TA+++ F LQ +E LP+D
Sbjct: 231 ELDASVEPTIGPYEVYEDGWFNAKAAFEAFIGVRDDAETAKLQRFAAELQGIEDALPIDA 290
Query: 510 AYKSKDVIA-APIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAK 567
A K+ + A APIRV+ + +GD +KG QT AFNLPNDERIV++ G+ VMLKNV EAK
Sbjct: 291 ALKNPKLGAMAPIRVVNELLAAGDAMKGVQTAAFNLPNDERIVREMGSKRVMLKNVQEAK 350
Query: 568 FKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQE 627
F+ +L PIA + + K + V FD FFTH + HE HG+GPH + L GR +TVR EL +
Sbjct: 351 FQRVLLPIAGIALSKADRAAVAFDPFFTHILMHELLHGLGPHELVL-GGRTTTVRAELGD 409
Query: 628 LHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQA 687
+SA+EEAKAD+ GL+AL+ L+ L + + +++Y +FLA FRS+RFG+ E+HG+G A
Sbjct: 410 TYSALEEAKADVAGLFALQKLLDEGKLDRGMQRTLYPTFLASAFRSIRFGVGEAHGRGMA 469
Query: 688 LQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTM 747
LQ +W + A D +F++D K+ AV SL+ EI+TIQ +GD+ AA LL++ +
Sbjct: 470 LQLSWFLDAGAIAPRPDGSFAIDAAKMREAVVSLTREIMTIQGKGDRAAAQALLEQKGVV 529
Query: 748 TQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
++ L +L +PVDIAP F L Q
Sbjct: 530 RPEVQRVLDRLRG--IPVDIAPRFVTAEALTQ 559
>gi|197120933|ref|YP_002132884.1| MutT/NUDIX family protein [Anaeromyxobacter sp. K]
gi|196170782|gb|ACG71755.1| MutT/NUDIX family protein [Anaeromyxobacter sp. K]
Length = 565
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/579 (40%), Positives = 326/579 (56%), Gaps = 56/579 (9%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
L++ R+A V L +L+ L +++ AL +++A +MD +F QVW N L L E
Sbjct: 38 ALRRAEARFAPVDLKVDLSKLPASERTALAKLVEAGRIMDALFLRQVWAGNEALLLRLVE 97
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
D S L + + +L NK PW L+E+ AFL +P+
Sbjct: 98 --DRSPLGEARLRLFLRNKGPWDRLEEDRAFLPG-------VPE---------------- 132
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP ANFYP K E E W + L ++++ A FFT ++R
Sbjct: 133 ----KPQQANFYPAGAGKDEVERWAAGLAPEEKDRAMGFFTTVRR--------------- 173
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
DA L +VPYS EY L RA+ LL A L+ L ++A AF+ N
Sbjct: 174 DAAGK-------LVAVPYSLEYQGELARAAALLRDAAAATQDAGLRTFLEARAAAFVGNA 226
Query: 441 YYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
Y DSD+AW+ LDS ++ TIGPYE YED F KA FEAFIG+RD+ TA+V F LQ
Sbjct: 227 YRDSDVAWMRLDSAVEPTIGPYEVYEDGWFNAKAAFEAFIGVRDEAETAKVARFAAELQG 286
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E LP+D A+K+ + A APIRV+ +Y GD KG QT A+NLPNDE + + G+ V
Sbjct: 287 IEDALPIDAAFKNPKIGALAPIRVVNEVYAGGDAAKGVQTAAYNLPNDEWVTRTMGSKRV 346
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
MLKNV EAKF+ +L P+A + + V FD FFTH + HE HG+GPH + +G +
Sbjct: 347 MLKNVQEAKFQKVLLPVARRLLSPADRAHVAFDPFFTHILMHELVHGLGPHHAKV-NGEE 405
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L + +SA+EEAKAD+ GL+AL+ L+ L + + ++Y +FL G FRS+RFGL
Sbjct: 406 VTVRAALADTYSALEEAKADVAGLFALEKLLDDGKLDRRMRATLYPTFLCGAFRSIRFGL 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
E+HGKG A+Q NWL + A + D TF+VD K+ AV L+ EI+TIQA+GD+ A
Sbjct: 466 NEAHGKGMAIQLNWLLDHGAIVARKDGTFAVDGPKMRDAVAGLTREIMTIQAKGDRAGAK 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
+L+K + + AL ++E+ VPVDIAP F + L
Sbjct: 526 AMLEKLGVVRPEVARALARIED--VPVDIAPRFVTADAL 562
>gi|220915630|ref|YP_002490934.1| MutT/NUDIX family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953484|gb|ACL63868.1| MutT/NUDIX family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 565
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/579 (40%), Positives = 327/579 (56%), Gaps = 56/579 (9%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
L++ R+A V L +L+ L +++ AL +++A +MD +F QVW N L L+
Sbjct: 38 ALRRAEARFAPVDLKVDLSKLPASERTALAKLVEAGRIMDALFLRQVWAGNEAL--LLRL 95
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
D S L + + +L NK PW L+E+ AFL +P+
Sbjct: 96 VDDRSPLGEARLRLFLRNKGPWDRLEEDRAFLPG-------VPE---------------- 132
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP ANFYP K E E W + L ++++ A FFT ++R
Sbjct: 133 ----KPQQANFYPAGAGKDEVERWAAGLAPEEKDRAMGFFTTVRR--------------- 173
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
DA L +VPYS EY L RA+ LL +A L+ L ++A AF+ N
Sbjct: 174 DAAGK-------LVAVPYSLEYQGELARAAALLREAAAATQDAGLRTFLEARAAAFVGNA 226
Query: 441 YYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
Y DSD+AW+ LDS ++ TIGPYE YED F KA FEAFIG+RD+ TA+V F LQ
Sbjct: 227 YRDSDVAWMRLDSAVEPTIGPYEVYEDGWFNAKAAFEAFIGVRDEAETAKVARFAAELQG 286
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E LP+D A+K+ + A APIRV+ +Y GD KG QT A+NLPNDE + + G+ V
Sbjct: 287 IEDALPIDAAFKNPKIGALAPIRVVNEVYAGGDAAKGVQTAAYNLPNDEWVTRTMGSKRV 346
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
MLKNV EAKF+ +L P+A + + V FD FFTH + HE HG+GPH + +G +
Sbjct: 347 MLKNVQEAKFQKVLLPVARRLLSPADRAHVAFDPFFTHILMHELVHGLGPHHAKV-NGEE 405
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L + +SA+EEAKAD+ GL+AL+ L+ L + + ++Y +FL G FRS+RFGL
Sbjct: 406 VTVRAALADTYSALEEAKADVAGLFALEKLLDDGKLDRRMRATLYPTFLCGAFRSIRFGL 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
E+HGKG A+Q NWL + A + D TF+VD K+ AV L+ EI+TIQARGD+ A
Sbjct: 466 NEAHGKGMAIQLNWLLDHGAIVARKDGTFAVDAAKMRDAVAGLTREIMTIQARGDRAGAK 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
+L+K + + AL ++E+ +PVDIAP F + L
Sbjct: 526 AMLEKLGVVRPEVARALARIED--LPVDIAPRFVTADAL 562
>gi|385811742|ref|YP_005848138.1| MutT/NUDIX family protein [Ignavibacterium album JCM 16511]
gi|383803790|gb|AFH50870.1| MutT/NUDIX family protein [Ignavibacterium album JCM 16511]
Length = 566
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/589 (37%), Positives = 343/589 (58%), Gaps = 68/589 (11%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLR-DWLKE 260
L++++ ++ V + + LS+ +K L + +A+ ++D I+ QV+ N ++ + L +
Sbjct: 32 LKQKISKFIPVEIQYDENLLSEREKIVLEKLYQASKLIDSIYLDQVYSKNHQIKAELLAK 91
Query: 261 HADASELDKLKWMY--------YLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGW 312
+D S + + + I P+ L++++ F+ T
Sbjct: 92 LSDKSIVSDAEQKLKLNLELELFNIMFGPFDRLEDDKPFIGTEK---------------- 135
Query: 313 KGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLD 372
KP GANFYP DM K EFE W ++ TS FTVI+R++
Sbjct: 136 ------------KPLGANFYPEDMTKEEFENWIKQ-NPADEKSFTSEFTVIRRQN----- 177
Query: 373 SSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSK 432
G ++ ++PYSE YN+YLT S LL +A A +PSLK+ L S+
Sbjct: 178 ----GKLI--------------AIPYSEYYNNYLTVISNLLKEAAQYADNPSLKKYLLSR 219
Query: 433 ADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQV 491
ADAFLSN+YY SD+ W++L + ++V IGPYE YED +F YKA+FE+F+ I+D T ++
Sbjct: 220 ADAFLSNDYYQSDMDWMDLKNHNIEVVIGPYEVYEDGLFNYKASFESFVTIKDPVETKKL 279
Query: 492 KLFGDNLQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERI 549
++F L +E+NLP+D +K+ + +PI V+ ++ +GD K G QT+AFNLPNDER+
Sbjct: 280 EVFAKYLNDIEKNLPLDEKHKNYQRGSESPIVVVNEVFTAGDTKAGVQTLAFNLPNDERV 339
Query: 550 VKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPH 609
K +G+ VMLKNV EAKF+ +L+PIA++ + E V FD+FF H + HE HG+GP
Sbjct: 340 RKAKGSKKVMLKNVHEAKFEKLLKPIAELVLEPELLPFVTFDAFFNHTLMHEMSHGVGPG 399
Query: 610 SITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAG 669
IT+ +G+Q+ V+ EL+E +S MEE KADI+G++ F+I + + PK + K ++V+FLAG
Sbjct: 400 FITV-NGKQTEVKKELKETYSTMEECKADILGMYNNIFMIEKGVYPKEMGKQVWVTFLAG 458
Query: 670 CFRSVRFGLEESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTI 728
FRS+RFG+ E HG G A+ +N+L EK A++ + +DF+K+ A++ +LTI
Sbjct: 459 AFRSMRFGIGEVHGGGNAIIYNFLLEKGAYVYDDAKQKVKIDFEKIYPALKEFCNLVLTI 518
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
QA G+ +AA L+ KY + + +KLE ++PVDI P F KL
Sbjct: 519 QAEGNYQAAKDLISKYTVKSPSIDALTKKLE--KLPVDIKPLFEIEKKL 565
>gi|224075734|ref|XP_002304742.1| predicted protein [Populus trichocarpa]
gi|222842174|gb|EEE79721.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/257 (70%), Positives = 210/257 (81%), Gaps = 19/257 (7%)
Query: 10 HLDVLTMTGQKTGITKPRS-------------------EVHRVGDYHRTVNAWIFAESTQ 50
LDVL TGQKTGI+KPR EVHR GDYHR V+ WI++ESTQ
Sbjct: 18 RLDVLNKTGQKTGISKPRQSPISLLPLSISSSIILLLREVHRDGDYHRAVHVWIYSESTQ 77
Query: 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL 110
ELLLQRRAD KDSWPG WDISSAGHISAGDSSL+SAQRELQEELGI+LPKDAFE +F +L
Sbjct: 78 ELLLQRRADCKDSWPGRWDISSAGHISAGDSSLVSAQRELQEELGISLPKDAFEHIFIYL 137
Query: 111 QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
Q+ VINDGKFINNEF DVYLVTT++PIPLEAFTLQ+TEVSAVKYI++EEY++LL K+DP
Sbjct: 138 QECVINDGKFINNEFNDVYLVTTVDPIPLEAFTLQETEVSAVKYISFEEYRSLLVKEDPD 197
Query: 171 FVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALV 230
+VPYDV+ YGQLF II +RY ENT+ RSL+LQKQL RYA VSL+AEL GLS+ D++ L
Sbjct: 198 YVPYDVDEQYGQLFEIIMKRYTENTVARSLSLQKQLCRYASVSLDAELTGLSNTDRKTLG 257
Query: 231 LVIKAATVMDEIFYLQV 247
L+IKAA +MDEIFYLQ+
Sbjct: 258 LLIKAAKLMDEIFYLQM 274
>gi|384497507|gb|EIE87998.1| hypothetical protein RO3G_12709 [Rhizopus delemar RA 99-880]
Length = 533
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 313/585 (53%), Gaps = 72/585 (12%)
Query: 198 RSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDW 257
RSLT +L R+A A+L+ L + AL ++KA +D+++ Q W N LR+
Sbjct: 6 RSLT--DRLARFALYECTADLSHLHVKEHAALKHLVKAGKYIDQLYMRQAWSGNEALREK 63
Query: 258 LKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEY 317
L + +L L MY K PW+ D+N F+ A
Sbjct: 64 LHSEGN-KDLCTLFEMY----KGPWAREDDNAIFVEGAPK-------------------- 98
Query: 318 KASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSG 377
+P G NFYP DM EF+ W SL E++Q+ A S++TVI+R + L
Sbjct: 99 -------RPEGGNFYPEDMTTGEFQKWAESLPEEEQKRAKSYYTVIQRDEKGRLS----- 146
Query: 378 HIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAG--------DMASSPSLKRLL 429
SVPYSE Y L + L A S+ L
Sbjct: 147 -----------------SVPYSEAYRDLLKPVANHLRDAAKELKDVYDQENEGTSVCDFL 189
Query: 430 HSKADAFLSNNYYDSDIAWIELD--SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKA 487
S+AD+F +N+Y S++ W+ L + L++T+GPYE Y D +F +K+ +E +I +RD +
Sbjct: 190 LSRADSFETNDYLTSELNWLRLGKTNNLEITLGPYEQYTDGLFTFKSAYEFYIHVRDAHS 249
Query: 488 TAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDE 547
+ ++ F D LQ +E LP+ Y++K+++ API V+ +Y +GDV P T A+NLPNDE
Sbjct: 250 SRLLEKFSD-LQFVEDRLPIPEKYRNKELVVAPIVVVNQLYAAGDVAVPMTAAYNLPNDE 308
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
+K G+ +V++KNV E KF+N+L+PIA + ++Q + D+F TH + HE CH G
Sbjct: 309 EAIKKGGSKLVLIKNVQEGKFENVLKPIAKEVLSEDQIHYLSKDAFTTHVLLHEVCHSNG 368
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
PH DG TVR +LQE HSA EEAKADI L+A ++ + + +V+FL
Sbjct: 369 PHHTL--DGH--TVRTKLQEYHSAFEEAKADIAALFAADIMVDCGTIDNVTQREFWVTFL 424
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEIL 726
A FRS+RFG++E+HG GQA+Q N+L EK FI F VDF+K+ AV L+ +IL
Sbjct: 425 ASAFRSIRFGIQEAHGLGQAMQLNYLVEKGGFIYDEQSKLFRVDFEKIRSAVADLTHDIL 484
Query: 727 TIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
+Q GDKEA ++KY T+ K AL ++++ +PVDI P +
Sbjct: 485 ILQGDGDKEAVHTFVKKYGTLHSSTKEALARIDDAGIPVDIRPIY 529
>gi|163749002|ref|ZP_02156253.1| putative orphan protein [Shewanella benthica KT99]
gi|161331378|gb|EDQ02266.1| putative orphan protein [Shewanella benthica KT99]
Length = 567
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 323/580 (55%), Gaps = 70/580 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH- 261
Q L ++ V + A+L+ LSD DK L +I A V+D+++ Q + +N +R +++
Sbjct: 50 QAMLDKFITVDMQADLSSLSDIDKRVLRKLISVADVLDKVYLEQTYENNAEIRKQIQDSN 109
Query: 262 -ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
A+ ++L L ++Y PW +L+ ++ F
Sbjct: 110 LANTAQLLSLYDLHY----GPWDTLEGDKIFFGD-------------------------- 139
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSF---FTVIKRRSEFNLDSSLSG 377
+P+P GA YP DM K EF W + +D +F +TVIKR+ +
Sbjct: 140 --IPRPKGAGVYPTDMTKAEFNQW----IQDHPQDEVAFKSGYTVIKRQGD--------- 184
Query: 378 HIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFL 437
L ++PYS+ Y + + +A+ L+ +A + SLK L +ADAFL
Sbjct: 185 --------------KLVAIPYSQAYATQMQQAATLMREAAALTQDASLKTFLTKRADAFL 230
Query: 438 SNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDN 497
++ Y DS++AW++LD L+V IGPYETY D +FGYK FEAFI +R+ + +A++ ++
Sbjct: 231 NDEYRDSEMAWMDLDGTLEVAIGPYETYTDKLFGYKTFFEAFITVRNPEDSAKLDVYKQY 290
Query: 498 LQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGT 555
L+ +E NLP+ + +K+ + +PI V+ + GD K QT AFNLPNDE + + +G+
Sbjct: 291 LKGMELNLPIPDEHKNFQRGSESPISVVDQVAGGGDNKPAVQTTAFNLPNDEYVREVKGS 350
Query: 556 SMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD 615
VMLKNV AK+K +++PI+ + I K QQ L+ FF + HE HG+GP +I + D
Sbjct: 351 KKVMLKNVLNAKYKAVMQPISALIIAKPQQSLLMERYFFNETLFHELSHGLGPGTI-IKD 409
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVR 675
G+ +TV +LQE +S +EE KAD++G + + FL+ +D+LPKS +M V++ AG FRS+R
Sbjct: 410 GKTTTVSEQLQETYSKIEEGKADVMGAYNMLFLMDKDVLPKSEKNNMLVTYFAGLFRSMR 469
Query: 676 FGLEESHGKGQALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDK 734
FG+ E+HG G A Q+N+ EK+AF S ++V+FDK+ A+ L +I IQA GD
Sbjct: 470 FGVHEAHGAGAAFQYNYFKEKQAFSFDSSTQRYTVNFDKMTQAITDLVRDICMIQALGDY 529
Query: 735 EAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAV 774
+ + L KY M + QK+ Q+P DI P + +
Sbjct: 530 QQSKDFLAKYAVMADEVAALNQKM--AQIPTDIRPNYPKI 567
>gi|371777108|ref|ZP_09483430.1| hypothetical protein AnHS1_06812 [Anaerophaga sp. HS1]
Length = 546
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/590 (34%), Positives = 328/590 (55%), Gaps = 72/590 (12%)
Query: 183 LFNIISQRYKENTMERSL-TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDE 241
+ ++ + ++N +E ++ L++++ Y V L +++GLS A KE L L+ + A +MDE
Sbjct: 13 IVTMLGCQSRQNRLEPAIPNLKQRVDAYQTVQLKTDISGLSSAQKEMLSLLFEVANIMDE 72
Query: 242 IFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKL 301
+F+ Q W +L + +K++ +L + Y IN PW L+ NE F+
Sbjct: 73 LFWQQAWGDKNILLNNIKDN----DLKR----YVKINYGPWDRLNNNEPFI--------- 115
Query: 302 LPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFT 361
KG+ PKP GA FYP DM K EF+ + + S +T
Sbjct: 116 -----------KGIG-------PKPAGARFYPEDMTKKEFQ-------QLSNHNKGSLYT 150
Query: 362 VIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMAS 421
VI+R + G +V +PYS+++ LT+ASELL +A ++A
Sbjct: 151 VIERNDQ--------GKLV--------------VIPYSQKWKKELTKASELLLEASELAE 188
Query: 422 SPSLKRLLHSKADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFI 480
S KR L +A A L+N+YY SD+AW+E+ D+ +D +GP ETYED + G KA FEA++
Sbjct: 189 SEGFKRYLKERAKALLTNDYYKSDLAWMEMKDNLIDFVVGPIETYEDGLMGAKAAFEAYL 248
Query: 481 GIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQT 538
I+D +A++ F L L+++LP+D+ YK++ + + + +IY +GD G +T
Sbjct: 249 LIKDTVWSARLNHFAQFLPQLQKDLPVDDKYKTEMPGSDSDLNAYDVIYYAGDCNAGSKT 308
Query: 539 VAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNI 598
+A NLPND + +G+ + LKN AKF IL PI+ + I +Q++ +DF++FF + +
Sbjct: 309 IAINLPNDPDVQIKKGSRKLQLKNSMRAKFDQILVPISQLLIDPDQRQYIDFNAFFENTM 368
Query: 599 CHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSL 658
HE HG+G + G TVR L+E SA+EE KADI+GL+ + L L
Sbjct: 369 FHEVAHGLGIKTTINGKG---TVREALKETASAIEEGKADILGLYIITHLTEMGELDNKD 425
Query: 659 VKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILH-SDDTFSVDFDKVEGA 717
+++ YV+F+A FRSVRFG +HGK ++FN+ EK+AF + D T+ VDF+K++ A
Sbjct: 426 LRTNYVTFMASIFRSVRFGAASAHGKANMIRFNYFLEKKAFTRNPQDGTYKVDFEKMKEA 485
Query: 718 VESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
++ LS EIL +Q GD E A +L + +T LK L ++ + +PVDI
Sbjct: 486 MQQLSKEILVLQGEGDYEKAKRMLDELGVITPQLKKDLDRINDANIPVDI 535
>gi|162454779|ref|YP_001617146.1| hypothetical protein sce6497 [Sorangium cellulosum So ce56]
gi|161165361|emb|CAN96666.1| hypothetical protein sce6497 [Sorangium cellulosum So ce56]
Length = 521
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 319/575 (55%), Gaps = 65/575 (11%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L ++++++A L A++ L + ++ AL +I+A+ +D +F Q + NP LR+ L
Sbjct: 2 LSEKVKQFAPARLTADIDDLPEPERRALGKLIEASRQLDPVFDRQAYAGNPELREELV-- 59
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
AD + + + Y+ I + PW D + F +
Sbjct: 60 ADGTPEGRDRLAYFDIMRGPWDRQDHHRPF----------------------------AI 91
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSF---FTVIKRRSEFNLDSSLSGH 378
P PPGA FYP D+ E W E+ D +F FT+I+R G
Sbjct: 92 DRPHPPGAGFYPEDLSADELNAW----IEQHPGDKEAFESLFTLIRRDQ---------GR 138
Query: 379 IVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLS 438
+V +VPYS+ Y ++L A LL +A + +S SL+R L S+A AF S
Sbjct: 139 LV--------------AVPYSQAYAAWLGPAGALLEEAAALTASESLRRFLRSRAAAFRS 184
Query: 439 NNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
++YY SD W++LDS ++ TIGPYETYED + G KA+FE+F+ + D A+ ++ + + L
Sbjct: 185 DDYYASDKDWMDLDSRVEATIGPYETYEDELLGLKASFESFVTVSDPDASRKLSKYKELL 244
Query: 499 QVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSM 557
+E+NLP+ K+ +PI+V+ L++++GD K QT+AFNLPNDER+ ++G
Sbjct: 245 PEMERNLPVPEDVKTARGGESPIQVVDLVFSAGDARKSVQTIAFNLPNDERVRAEKGAKK 304
Query: 558 VMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGR 617
V+L+NV E KF+ I+RPIA+ + Q E + D+FF + HE H +GP + T G+
Sbjct: 305 VLLRNVIETKFELIMRPIAERILDPAQLEHLSSDAFFNETLFHELSHSLGP-AFTTASGQ 363
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG 677
+ VR+ L +SA+EEAKAD++G + + F+I R + + +S+ AG FRS RFG
Sbjct: 364 RVEVRIALGPTYSALEEAKADVMGAYNVLFMIQRGHFAADFREKLLISYFAGLFRSTRFG 423
Query: 678 LEESHGKGQALQFN-WLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEA 736
+ E+HGKG ALQ N +L E+ A + F+VD +++E A+ L ++ +Q RGD++A
Sbjct: 424 VAEAHGKGAALQINRFLEERAARFDPATRRFTVDAEELEAAITRLVRDLCMVQHRGDRQA 483
Query: 737 ASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
A LL +Y ++ P++ AL LE +P+DI P +
Sbjct: 484 AGELLARYGEVSAPMQHALGGLEG--IPIDIRPIY 516
>gi|255613836|ref|XP_002539540.1| conserved hypothetical protein [Ricinus communis]
gi|223505130|gb|EEF22843.1| conserved hypothetical protein [Ricinus communis]
Length = 327
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 230/328 (70%), Gaps = 9/328 (2%)
Query: 398 YSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDV 457
YS+EY + L + S+LL A + + SLK+ L+ +ADAFLSN+Y SD AW++LDS +DV
Sbjct: 1 YSDEYRAELQKLSKLLKDAANATDNASLKKFLNLRADAFLSNDYLASDFAWMDLDSPVDV 60
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
TIGPYETY D +FGYKA FEA++ +RD K T ++ FG ++Q LE NLP+D Y++ V
Sbjct: 61 TIGPYETYNDELFGYKAAFEAYVNVRDQKETEKLNFFGKHMQELENNLPLDPKYRNPKVG 120
Query: 518 A-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPI 575
A AP+ V+ +Y +GD G QT A+NLPNDERI++ RG+ VMLKNV EAKF+ L PI
Sbjct: 121 AIAPMVVVNQVYGAGDGNMGVQTAAYNLPNDERIIRQRGSKRVMLKNVQEAKFEATLMPI 180
Query: 576 ADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEA 635
+ + +R Q+ +DFDSFFTH + HE HG+GPH+ T +G+ ST R +L++ +S +EEA
Sbjct: 181 SKLVLRPADQKDLDFDSFFTHILAHEIMHGLGPHATTR-NGQPSTPRQDLKDAYSTIEEA 239
Query: 636 KADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRSVRFGLEESHGKGQALQ 689
KAD+ GLWAL +++ + L +SL + +Y ++LA FR++ FGL +SH +G A+Q
Sbjct: 240 KADVTGLWALTYMMEKGQLKESLGQGAAAERKLYNTYLASAFRTLHFGLTDSHARGMAIQ 299
Query: 690 FNWLFEKEAFILHSDDTFSVDFDKVEGA 717
N+L +K F+ H D TFSVDF K++GA
Sbjct: 300 MNYLLDKGGFVSHGDGTFSVDFAKIKGA 327
>gi|149923843|ref|ZP_01912233.1| hypothetical protein PPSIR1_31088 [Plesiocystis pacifica SIR-1]
gi|149815300|gb|EDM74845.1| hypothetical protein PPSIR1_31088 [Plesiocystis pacifica SIR-1]
Length = 598
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 327/602 (54%), Gaps = 58/602 (9%)
Query: 181 GQLFNIISQRYKENTMERSL-TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVM 239
G L ++ Y T + LQ ++ ++ V L A+LA L + ++EAL +I+AA ++
Sbjct: 47 GPLSELLVSEYALGTEAATAEVLQAKVDQFVPVVLEADLASLPEGEQEALAALIEAARLL 106
Query: 240 DEIFYLQVWYSNPVLRDWLKEHADASE---LDKLKWMYYLINKSPWSSLDENEAFLTTAD 296
D +F QVW P L+ A A L++L+ Y+ I + PW D F
Sbjct: 107 DPVFDRQVWVDYPGHEARLEAAAQAEGAGELERLRLDYFQIMRGPWDRQDHFAPF----- 161
Query: 297 SAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDA 356
+ + PPGA FYPP + +F + + ++ E
Sbjct: 162 -----------------------AIDIAHPPGAGFYPPGLSAEDFRAYADAHPARRGE-L 197
Query: 357 TSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKA 416
S FTV++R + + +L +VPYS+ + +L A+E + A
Sbjct: 198 ESLFTVVQRDPQ--------------------APAELVAVPYSQAFAQWLEPAAERMRAA 237
Query: 417 GDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSELDVTIGPYETYEDAIFGYKATF 476
++ S+ SL L S+ADAF S++YY SD W++LDS ++ TIGPYETYED + G KA+F
Sbjct: 238 AELTSNESLATFLRSRADAFASDDYYQSDKDWMDLDSRVEATIGPYETYEDELLGLKASF 297
Query: 477 EAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDV-KG 535
EAF+ + D A+ ++ ++ + L +EQ+LP+D+A K++ +PIRV+ L++ SGD K
Sbjct: 298 EAFVTVSDPDASKKLSVYKEWLPKMEQHLPVDDAVKTQRGAESPIRVVDLVFTSGDARKS 357
Query: 536 PQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFT 595
QT+AFNLPNDER+ K++G VML+N AKF I+ PIA+ I EQ ++ D+FF
Sbjct: 358 VQTIAFNLPNDERVRKEKGAKKVMLRNAINAKFDAIMTPIAERVIVAEQLPMLSQDAFFN 417
Query: 596 HNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLP 655
+ HE H +GP ++ D R+ VR+ L +S +EE KAD++G W + ++I L P
Sbjct: 418 EVLFHELSHSLGPATVKQGD-REIEVRVALGASYSPLEEGKADVMGAWNILYMIDEGLFP 476
Query: 656 KSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSD-DTFSVDFDKV 714
K + + V++ AG FRSVRFG+ E+HGKG A Q N E +A ++ F+VD K+
Sbjct: 477 KDFREPLLVTYFAGLFRSVRFGVAEAHGKGAAFQINRFLEAKAATFDAETGKFTVDPAKL 536
Query: 715 EGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAV 774
E A+E+L +++ +Q GDK A L Y ++ ++ AL L +P+DI P + A
Sbjct: 537 EQAIEALVRDVVMLQHAGDKGAVDSFLDTYAVVSPEMEQALGSLSG--IPIDIRPVYPAA 594
Query: 775 NK 776
+
Sbjct: 595 GE 596
>gi|157375374|ref|YP_001473974.1| MutT/NUDIX family protein [Shewanella sediminis HAW-EB3]
gi|157317748|gb|ABV36846.1| MutT/NUDIX family protein [Shewanella sediminis HAW-EB3]
Length = 565
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 192/575 (33%), Positives = 316/575 (54%), Gaps = 60/575 (10%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
Q+ L R+ + + A+L LSD DK+ L +I+ A ++DE++ Q + N +R + E +
Sbjct: 48 QEMLDRFVTIDMKADLTALSDIDKQVLKKLIQVADILDEVYLRQTYDDNASIRAQILESS 107
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A + +L Y ++ PW +L+ ++ F
Sbjct: 108 LADK--ELILSLYDLHYGPWDTLEGDKNFFGD---------------------------- 137
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
+ +P GA YP DM K EF W L + + S +TVI+R+ +
Sbjct: 138 IKRPDGAGVYPTDMSKEEFNEW-IKLHPEDEAKFKSGYTVIRRQGD-------------- 182
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
L ++PYS+ Y + ++ L+ +A + SLK L +ADAFL++ Y
Sbjct: 183 ---------KLIAIPYSQFYAKEMKASAALMREAAALTLDQSLKTFLTKRADAFLNDEYR 233
Query: 443 DSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
DS++AW++LD L+V IGPYETY D +FGYK +EAFI +R+ + +A++ ++ L+ +E
Sbjct: 234 DSEMAWMDLDGSLEVAIGPYETYTDKLFGYKTFYEAFITVRNPEDSAKLDVYKKYLKEME 293
Query: 503 QNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVML 560
NLP+ + +K+ + +PI V+ + GD K QT AFNLPNDE + + +G+ VML
Sbjct: 294 LNLPIPDQHKNLQRGSESPISVVDQVAGGGDNKPAVQTTAFNLPNDEYVREVKGSKKVML 353
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
KNV AK+ +++PI+++ I EQQ L+ FF + HE HG+GP SI + DG+ +T
Sbjct: 354 KNVLNAKYNAVMKPISELIIADEQQSLLMEKYFFNETLFHELSHGLGPGSI-IKDGKNTT 412
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
V +LQE +S +EE KAD++G + + FL+ + LPK+ SM V++ AG FRS+RFG+ E
Sbjct: 413 VAEQLQETYSKIEEGKADVMGAYNMLFLMDKGELPKAERDSMLVTYFAGLFRSMRFGVHE 472
Query: 681 SHGKGQALQFNWLFEKEAFILHS-DDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HG G A Q+N+ EK+AF + ++V+ D + ++ L ++ IQA GD + +
Sbjct: 473 AHGAGAAFQYNYFKEKQAFSFDPVSERYTVNLDAMAQSISDLVHDVCMIQALGDYQKSKS 532
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAV 774
L++Y M+ +VA ++ +P DI P + +
Sbjct: 533 FLERYAVMSA--EVAQLNIKMESIPTDIRPNYPTI 565
>gi|345303580|ref|YP_004825482.1| hypothetical protein Rhom172_1731 [Rhodothermus marinus
SG0.5JP17-172]
gi|345112813|gb|AEN73645.1| hypothetical protein Rhom172_1731 [Rhodothermus marinus
SG0.5JP17-172]
Length = 555
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 315/579 (54%), Gaps = 90/579 (15%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVW---------YSNPV 253
Q LR+YA L A+L+GLSD + L L+I+AA MD IF +Q + +P
Sbjct: 41 QALLRKYAPFRLEADLSGLSDNQRRILGLLIEAAREMDAIFKVQAYGNLDSLLATIEDPG 100
Query: 254 LRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWK 313
LR +++ IN PW LD N FL
Sbjct: 101 LRRFVE-----------------INYGPWDRLDGNRPFLEGVG----------------- 126
Query: 314 GLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDS 373
PKPPGANFYPPDM + EFE+ + + E S +T+++R ++
Sbjct: 127 ----------PKPPGANFYPPDMTREEFEVAAA-----ENEALRSLYTMVRRDAQ----- 166
Query: 374 SLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKA 433
G +V ++PY E + ++ RA+ELL +A ++A L+R L +A
Sbjct: 167 ---GRLV--------------AIPYHEFFAPHVRRAAELLRQAAELAEDEGLRRYLTLRA 209
Query: 434 DAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVK 492
+A L+++YY+SD AW+++ + +DV IGP ETYED +FGYKA EAF+ ++D + ++
Sbjct: 210 EALLTDDYYESDRAWLDMKTNTIDVVIGPIETYEDQLFGYKAAAEAFVLLKDRAWSERLG 269
Query: 493 LFGDNLQVLEQNLPMDNAYKSKDV-IAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIV 550
+ L L+ LP+ +AYK + + + +Y +GD G +T+A NLPNDER+
Sbjct: 270 RYATLLPELQAALPVPDAYKREQPGTDSDLGAYDALYYAGDANAGAKTIAINLPNDERVQ 329
Query: 551 KDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG-PH 609
++GT + LKNV AKF+ IL PIADV I ++Q+ + FD+FF + + HE HG+G H
Sbjct: 330 LEKGTRRLQLKNVMRAKFEKILLPIADVLIAEDQRTHITFDAFFGNTMFHEVAHGLGIKH 389
Query: 610 SITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAG 669
+I GR TVR L++L++ MEE KAD++GL+ + +LI R + YV+FLAG
Sbjct: 390 TIA---GR-GTVREALRDLYTTMEEGKADVLGLYMVTWLIDRGEWEADPMDH-YVTFLAG 444
Query: 670 CFRSVRFGLEESHGKGQALQFNWLFEKEAFILH-SDDTFSVDFDKVEGAVESLSTEILTI 728
FRS+RFG +HG+ ++FN+ E+ AF + T+ V ++++ AV +LS +IL +
Sbjct: 445 IFRSIRFGAASAHGRANLIRFNFFKEQGAFTRDAATGTYRVVPERMQAAVAALSEQILRL 504
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD A + +++Y M L+ L +++ +PVDI
Sbjct: 505 QGDGDYAATAAFIERYGQMDDTLRADLARIQQAGIPVDI 543
>gi|262195722|ref|YP_003266931.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262079069|gb|ACY15038.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
Length = 545
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 313/572 (54%), Gaps = 56/572 (9%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L ++ Y V + A++A L +A+++AL +I AA ++D IF QV+ NP L + L
Sbjct: 23 LSAKIAGYVPVQITADVAHLPEAERQALDALIDAARLLDPIFDRQVYLGNPALAETLA-- 80
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
+D + L + ++ Y+ I + PW D F +
Sbjct: 81 SDHTPLGEARYTYFRIMRGPWDRQDHLAPF----------------------------AV 112
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
+ PPGA +YP D+D+ + ++ E Q+E S +T+++R + D
Sbjct: 113 DMAHPPGAGYYPEDLDEAALRDYLAAHPE-QREALMSPYTLVRRDQD------------D 159
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
A L +VPYSE Y +L A+E L +A + + SL R L S+A AF ++Y
Sbjct: 160 AAA--------LVAVPYSEAYAQWLEPAAEKLEEAAALTDNDSLARFLRSRAQAFRDDDY 211
Query: 442 YDSDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
Y SD W++LDS +++TIGPYETYED + G KA FEAF+ + D A+ + F + L +
Sbjct: 212 YQSDKDWMDLDSAVEITIGPYETYEDELMGQKAAFEAFVTVADPAASQALTKFKELLPAM 271
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGP-QTVAFNLPNDERIVKDRGTSMVML 560
E NLP+ + K++ +PIRV+ L++ SGD + QT+AFNLPNDER+ K++G V+L
Sbjct: 272 EANLPVADEVKTQRGAESPIRVVDLVFASGDARSAVQTIAFNLPNDERVRKEKGAKKVLL 331
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
+NV + KF I++P+ + I +Q L+D ++FF + HE H +GP + D
Sbjct: 332 RNVIKTKFDAIMQPVGERVIAADQVALLDAEAFFQETLFHELSHSLGP-AFVGNDEAGGE 390
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
V++ L ++A+EE KAD++G + + ++I P S + V++ AG FRSVRFG+ E
Sbjct: 391 VKVALGASYAALEEGKADVMGAYNVLYMIDEGHFPASFRDRLLVTYFAGLFRSVRFGVAE 450
Query: 681 SHGKGQALQFNWLFEKEAFILHSDD-TFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HG+G ALQ N E A + FSVD +E ++++L +++ Q GDK A
Sbjct: 451 AHGQGAALQINRFIEDGAVTADPESGRFSVDLAALERSIDTLVRDMVMWQHNGDKAAVDA 510
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
+L + +T ++ AL +LE+ +PVDI PT+
Sbjct: 511 VLARLGVLTPAIERALSQLED--IPVDIRPTY 540
>gi|268317328|ref|YP_003291047.1| hypothetical protein Rmar_1775 [Rhodothermus marinus DSM 4252]
gi|262334862|gb|ACY48659.1| putative orphan protein [Rhodothermus marinus DSM 4252]
Length = 555
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 312/579 (53%), Gaps = 90/579 (15%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVW---------YSNPV 253
Q LR+YA L A+L+GLSD + L L+I+AA MD IF +Q + +P
Sbjct: 41 QALLRKYAPFRLEADLSGLSDNQRRMLGLLIEAAREMDAIFKVQAYGNLDSLLATIEDPG 100
Query: 254 LRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWK 313
LR +++ IN PW LD N FL
Sbjct: 101 LRRFVE-----------------INYGPWDRLDGNRPFLEGVG----------------- 126
Query: 314 GLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDS 373
PKPPGANFYPPDM + + + E S +T+++R ++
Sbjct: 127 ----------PKPPGANFYPPDMTRE-----EFEAAAAENEALRSLYTMVRRDAQ----- 166
Query: 374 SLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKA 433
G +V ++PY E + ++ RA+ELL +A ++A L+R L +A
Sbjct: 167 ---GRLV--------------AIPYHEFFAPHVRRAAELLRQAAELAEDEGLRRYLTLRA 209
Query: 434 DAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVK 492
+A L+++YY+SD AW+++ + +DV IGP ETYED +FGYKA EAF+ ++D + ++
Sbjct: 210 EALLTDDYYESDRAWLDMKTNTIDVVIGPIETYEDQLFGYKAAAEAFVLLKDRAWSERLG 269
Query: 493 LFGDNLQVLEQNLPMDNAYKSKDV-IAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIV 550
+ L L+ LP+ +AYK + + + +Y +GD G +T+A NLPNDER+
Sbjct: 270 RYATLLPELQAALPVPDAYKREQPGTDSDLGAYDALYYAGDANAGAKTIAINLPNDERVQ 329
Query: 551 KDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG-PH 609
++GT + LKNV AKF+ IL PIADV I ++Q+ + FD+FF + + HE HG+G H
Sbjct: 330 LEKGTRRLQLKNVMRAKFEKILLPIADVLIAEDQRPHITFDAFFGNTMFHEVAHGLGIKH 389
Query: 610 SITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAG 669
+IT GR TVR L++L++ MEE KAD++GL+ + +LI R + YV+FLAG
Sbjct: 390 TIT---GR-GTVREALRDLYTTMEEGKADVLGLYMVTWLIDRGEWEADPMDH-YVTFLAG 444
Query: 670 CFRSVRFGLEESHGKGQALQFNWLFEKEAFILH-SDDTFSVDFDKVEGAVESLSTEILTI 728
FRS+RFG +HG+ ++FN+ E+ AF + T+ V ++++ AV +LS +IL +
Sbjct: 445 IFRSIRFGAASAHGRANLIRFNFFKEQGAFTRDAATGTYRVVPERMQAAVAALSEQILRL 504
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD A + +++Y M L+ L +++ +PVDI
Sbjct: 505 QGDGDYAATAAFIERYGQMDDTLRADLARIQQAGIPVDI 543
>gi|392389501|ref|YP_006426104.1| Peptidase family M49 [Ornithobacterium rhinotracheale DSM 15997]
gi|390520579|gb|AFL96310.1| Peptidase family M49 [Ornithobacterium rhinotracheale DSM 15997]
Length = 540
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 317/565 (56%), Gaps = 72/565 (12%)
Query: 206 LRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADAS 265
L +Y V L +L+ L+ ++++ + +I+AA VM+++F+ + + L ++LK DA
Sbjct: 32 LAQYTPVKLTTDLSKLTPSERKMIPYLIEAANVMNDLFWYEGYGKKQALLEYLK--GDAR 89
Query: 266 ELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPK 325
+ Y +IN PW LD + F+ KG+ K
Sbjct: 90 K-------YAIINYGPWDRLDNDLPFV--------------------KGVG-------RK 115
Query: 326 PPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNH 385
P GANFYP +M K EFE K++L E S +T ++R ++ G
Sbjct: 116 PLGANFYPTNMTKEEFE--KANLPE-----GKSLYTFVRR--------NMKG-------- 152
Query: 386 SVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD 445
+LY++PY + + + +ELL KA ++ LK L +ADA L++NYY+SD
Sbjct: 153 ------ELYTIPYHQMFEKEVHYVAELLQKAASISEDKELKNYLLKRADAMLTDNYYESD 206
Query: 446 IAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
+AWI + ++ +DV IGP ETYED +FG+KA EA++ I+D + + ++ + L L++
Sbjct: 207 LAWINMKNNTIDVIIGPIETYEDQLFGFKAAHEAYVLIKDKEWSKKLDKYASYLPELQKG 266
Query: 505 LPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKN 562
LP+ YK + + + + +IY +G+ G +T+A NLPNDE+I ++GT + LKN
Sbjct: 267 LPVPAEYKKETPGSDSDLGAYDVIYYAGNANAGSKTIAVNLPNDEKIQLEKGTRRLQLKN 326
Query: 563 VSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVR 622
+AKF IL PI + I EQ++ V+FD+FF + + HE HG+G + +GR TVR
Sbjct: 327 AMQAKFDKILIPIVNTLISPEQRKNVNFDAFFANTMFHEVAHGLGIKNTI--NGR-GTVR 383
Query: 623 LELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESH 682
L+E SA+EE KADI+GL+ + L+ + +L + K V+F+AG FRSVRFG +H
Sbjct: 384 ENLKEYASALEEGKADILGLYMVSELLNKGVLDGN-EKDFMVTFMAGIFRSVRFGASSAH 442
Query: 683 GKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
G ++FN+ E+ AF +SD T+ V+FDK + AVESLS ILT+Q GD E L++
Sbjct: 443 GIANTIRFNYFKEQGAFSKNSDGTYVVNFDKFKDAVESLSRLILTLQGDGDYEGVKRLVE 502
Query: 743 KYCTMTQPLKVALQKLENVQVPVDI 767
KY ++ L+ L KL + +PVDI
Sbjct: 503 KYGKISPELQKDLDKLNHDNIPVDI 527
>gi|124003882|ref|ZP_01688730.1| hypothetical protein M23134_08233 [Microscilla marina ATCC 23134]
gi|123990937|gb|EAY30404.1| hypothetical protein M23134_08233 [Microscilla marina ATCC 23134]
Length = 569
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/566 (35%), Positives = 310/566 (54%), Gaps = 70/566 (12%)
Query: 205 QLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA 264
+L+ Y V L +L+ L+D +K+ + L+I+AA +MD++F+ Q + D K A A
Sbjct: 57 KLKDYQTVKLTTDLSQLTDKEKQMIPLLIEAAQLMDDLFWEQAY------GDKSKALAKA 110
Query: 265 SELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLP 324
D+ K Y IN PW LD N+ F+ +
Sbjct: 111 KNEDEKK--YIAINYGPWDRLDNNKPFIEGVGN--------------------------- 141
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
KP GANFYP DM K E++ + +D S +T+I+R+ + +L+
Sbjct: 142 KPEGANFYPQDMTKEEYD-------QLDNKDKGSLYTIIRRKEDKSLEV----------- 183
Query: 385 HSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDS 444
+PYS Y LT+A+ELL KA ++A +PSLK+ L+ +A+AFL++ Y S
Sbjct: 184 -----------IPYSVAYKEKLTKAAELLKKAAELAENPSLKKYLNLRAEAFLTDQYKAS 232
Query: 445 DIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
D+AW++L D+ LDV IGP E YED I G KA FEA+I ++D + + ++ + L L++
Sbjct: 233 DMAWMDLKDNGLDVIIGPIENYEDKINGAKAAFEAYILVKDKEWSQKLARYATLLPQLQK 292
Query: 504 NLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLK 561
+P+++ YK + + + + ++Y +GD G +T+A NLPNDE I ++GT LK
Sbjct: 293 GIPVEDKYKKETPGSNSQLAAFDVVYYAGDCNAGSKTIAVNLPNDEGIQLEKGTRRSQLK 352
Query: 562 NVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTV 621
N +AKF NI+ PI++V I ++Q+ + FD+FF + + HE HG+G + DG+ TV
Sbjct: 353 NTMKAKFDNIVVPISNVLIAEDQRSNIAFDAFFQNVMFHEVAHGLGIKNTI--DGK-GTV 409
Query: 622 RLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEES 681
R L SA+EE KADI+GL+ + L L + +++ YV+FLA FRS+RFG S
Sbjct: 410 RKALGNTASAIEEGKADILGLYMVTELRKMKELTEGTLQNNYVTFLASIFRSIRFGAASS 469
Query: 682 HGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
HGK + FN+ + AF D T+ VDF+K AV+ L+ ++LT+Q GD EA L
Sbjct: 470 HGKANMVCFNFFQKMGAFTRGEDGTYKVDFEKFPEAVKGLTNKLLTLQGNGDYEATKKFL 529
Query: 742 QKYCTMTQPLKVALQKLENVQVPVDI 767
++ + L L +L+ +P DI
Sbjct: 530 EEMSVQSDVLTKDLARLKTAGIPKDI 555
>gi|410860352|ref|YP_006975586.1| hypothetical protein amad1_03525 [Alteromonas macleodii AltDE1]
gi|410817614|gb|AFV84231.1| hypothetical protein amad1_03525 [Alteromonas macleodii AltDE1]
Length = 564
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 316/579 (54%), Gaps = 70/579 (12%)
Query: 193 ENTMERSLTL-QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN 251
E T E++L + + +L Y V L ++L+ LSD + L L+I A+ +MD++F+ Q ++ +
Sbjct: 39 ETTTEQTLLVDESRLSIYHGVDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFED 98
Query: 252 PVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNG 311
+D D D+ + IN PW L+ + F++ D
Sbjct: 99 ---KDAFLSSID----DEDVRHFAAINYGPWDRLNGDTPFISGYDD-------------- 137
Query: 312 WKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNL 371
K PGA FYP D+DK EF +S +KQ ++++KR NL
Sbjct: 138 -------------KAPGAEFYPHDIDKAEFA--TASFEDKQ-----GLYSMVKRDEAGNL 177
Query: 372 DSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHS 431
YSVPYSE + S L +AS+LL KA ++A S K+ L
Sbjct: 178 ----------------------YSVPYSEAFKSELMKASDLLKKASELAEDESFKQYLQL 215
Query: 432 KADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ 490
+A+A LSN+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ I+D + +
Sbjct: 216 RAEALLSNDYLASDMAWMDMKTNPIELVIGPIESYEDQLFGYRAAFEAYVLIKDLAWSEK 275
Query: 491 VKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDER 548
+ + L L+Q LP+ AYK++ + A + +IY +G G +T+A NLPNDER
Sbjct: 276 LAKYAAFLPELQQGLPVAEAYKAEMPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDER 335
Query: 549 IVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGP 608
+ ++GT + LKN AKF IL PIAD I EQ++ + FD+FF + + HE HG+G
Sbjct: 336 VQLEKGTRRLQLKNAMRAKFDTILVPIADTLIVPEQRKHITFDAFFANTMFHEVAHGLGI 395
Query: 609 HSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLA 668
+ DG TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+A
Sbjct: 396 KNTL--DG-SGTVRGALKEHASALEEGKADILGLYMVQSLLEKGEITEGALEDYYVTFMA 452
Query: 669 GCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTI 728
G FRSVRFG +HGK ++FN+ ++ AF D + V+ +K+ AVE+LS ILT+
Sbjct: 453 GIFRSVRFGASSAHGKANMIRFNFFAQQGAFEKTEDGLYRVNMEKMGAAVEALSELILTL 512
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD + + L++ + L L +LE +PVDI
Sbjct: 513 QGDGDYDGVAELVETMGVIKPDLASDLARLEAASIPVDI 551
>gi|346225860|ref|ZP_08847002.1| hypothetical protein AtheD1_11945 [Anaerophaga thermohalophila DSM
12881]
Length = 544
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 304/570 (53%), Gaps = 71/570 (12%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
++ ++ Y L +L+ LS + KE L L+ + A +MD +F+ Q W + L D +K
Sbjct: 31 IKDRVEAYQSFRLTTDLSALSPSQKEMLPLLFEVADIMDNLFWQQAWGNKEQLLDNIKN- 89
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D L+ Y IN PW L +NE F+ KG+
Sbjct: 90 ------DHLR-RYAEINYGPWDRLHDNEPFI--------------------KGIG----- 117
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP DM EF S+L D +TVI+R +E
Sbjct: 118 --QKPAGARFYPEDMSVNEFRQL-SNL------DKNGLYTVIERDNE------------- 155
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
DL +PYS ++ L+RA+ELL +A ++A KR L +A AFLSN+Y
Sbjct: 156 ---------GDLTVIPYSRKWEEELSRAAELLMRASELAEDQGFKRYLKERAKAFLSNDY 206
Query: 442 YDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
+ SD+AW+++ + +D +GP ETYED + G KA FEA+I I+D +A++ F + L
Sbjct: 207 FRSDMAWMDMKNNIIDFVVGPIETYEDKLMGAKAAFEAYILIKDTVWSARLSHFAELLPQ 266
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVKGP-QTVAFNLPNDERIVKDRGTSMV 558
++Q LP+D YK++ + + + V IY +GD +T+A NLPND + +G+ +
Sbjct: 267 IQQALPVDAEYKNETPGSDSDLNVYDAIYYAGDCNAASKTIAINLPNDPDVQMKKGSRKL 326
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN +AKF+NIL PI+++ I QQ+ +DFD+FF + + HE HG+G + +
Sbjct: 327 QLKNSMKAKFENILVPISEILIDPSQQQYIDFDAFFENTMFHEVAHGLGIKNTI---NEK 383
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L+E SA+EE KADI+GL+ + L L + + YV+F+AG FRSVRFG
Sbjct: 384 GTVREALKETSSAIEEGKADILGLYIVTHLAETGELKNKDLMTNYVTFMAGIFRSVRFGA 443
Query: 679 EESHGKGQALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
+HGK ++FN+ EKEAF + + T+ VDF K++ A+ LS EIL +Q GD E A
Sbjct: 444 ASAHGKANMIRFNYFLEKEAFTRNPETGTYHVDFAKMKEAMNLLSEEILVLQGNGDYEKA 503
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
++ + + L+ L ++ +PVDI
Sbjct: 504 KKMVDESGIINTRLQQDLDRINEAGIPVDI 533
>gi|332140172|ref|YP_004425910.1| hypothetical protein MADE_1003820 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550194|gb|AEA96912.1| hypothetical protein MADE_1003820 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 564
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 310/571 (54%), Gaps = 69/571 (12%)
Query: 200 LTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLK 259
L + +L Y + L ++L+ LSD + L L+I A+ +MD++F+ Q ++ + +D
Sbjct: 47 LVDESRLSIYHGIDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFED---KDVFL 103
Query: 260 EHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKA 319
D ++ + IN PW L+ + F++ D
Sbjct: 104 SSIDDEDVRH----FAAINYGPWDRLNGDTPFISGYDD---------------------- 137
Query: 320 SFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHI 379
K PGA FYP D+DK EF +S +KQ ++++KR NL
Sbjct: 138 -----KAPGAEFYPHDIDKAEFA--TASFEDKQ-----GLYSMVKRDEAGNL-------- 177
Query: 380 VDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN 439
YSVPYSE + S L +AS+LL KA ++A S K+ L +A+A LSN
Sbjct: 178 --------------YSVPYSEAFKSELMKASDLLKKASELAEDESFKQYLQLRAEALLSN 223
Query: 440 NYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ I+D + ++ + L
Sbjct: 224 DYLASDMAWMDMKTNPIELVIGPIESYEDQLFGYRAAFEAYVLIKDLAWSEKLAKYAAFL 283
Query: 499 QVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTS 556
L+Q LP+ AYK++ + A + +IY +G G +T+A NLPNDER+ ++GT
Sbjct: 284 PELQQGLPVAEAYKAEMPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDERVQLEKGTR 343
Query: 557 MVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDG 616
+ LKN AKF IL PIAD I EQ++ + FD+FF + + HE HG+G + DG
Sbjct: 344 RLQLKNAMRAKFDTILVPIADTLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTL--DG 401
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRF 676
TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+AG FRSVRF
Sbjct: 402 -SGTVRGALKEHASALEEGKADILGLYMVQSLLEKGEITEGALEDYYVTFMAGIFRSVRF 460
Query: 677 GLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEA 736
G +HGK ++FN+ ++ AF D + V+ +K+ AVE+LS ILT+Q GD +
Sbjct: 461 GASSAHGKANMIRFNFFAQQGAFEKTEDGLYRVNMEKMGAAVEALSELILTLQGDGDYDG 520
Query: 737 ASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+ L++ + L L +LE +PVDI
Sbjct: 521 VAELVETMGVIKPDLASDLARLEAASIPVDI 551
>gi|407698893|ref|YP_006823680.1| hypothetical protein AMBLS11_03175 [Alteromonas macleodii str.
'Black Sea 11']
gi|407248040|gb|AFT77225.1| hypothetical protein AMBLS11_03175 [Alteromonas macleodii str.
'Black Sea 11']
Length = 564
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 317/579 (54%), Gaps = 70/579 (12%)
Query: 193 ENTMERSLTL-QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN 251
E E++L + + +L Y V L ++L+ LSD + L L+I A+ +MD++F+ Q ++ +
Sbjct: 39 ETAAEQTLLVDESRLSIYHGVDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFDD 98
Query: 252 PVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNG 311
K+ +S D+ + IN PW L+ + F++ D
Sbjct: 99 -------KDAFLSSISDEKVRHFAEINYGPWDRLNGDTPFISGYDD-------------- 137
Query: 312 WKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNL 371
K GA FYP DM+K EF + +KQ ++++KR NL
Sbjct: 138 -------------KALGAEFYPHDMEKEEFA--TADFADKQ-----GLYSIVKRDEAGNL 177
Query: 372 DSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHS 431
YSVPYSE Y S L +AS+LL KA ++A S K+ L
Sbjct: 178 ----------------------YSVPYSEAYKSELMKASDLLKKASELAEDESFKQYLQL 215
Query: 432 KADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ 490
+++A LSN+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ I+D + +
Sbjct: 216 RSEALLSNDYLASDMAWMDMKTNPVELVIGPIESYEDQLFGYRAAFEAYVLIKDLAWSEK 275
Query: 491 VKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDER 548
+ + L L+Q LP+ +AYK++ + A + ++Y +G G +T+A NLPNDER
Sbjct: 276 LAKYAAFLPELQQGLPVADAYKAEMPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDER 335
Query: 549 IVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGP 608
+ ++GT + LKN AKF IL PIAD I EQ+E + FD+FF + + HE HG+G
Sbjct: 336 VQLEKGTRRLQLKNAMRAKFDTILVPIADTLIVPEQREHITFDAFFANTMFHEVAHGLGI 395
Query: 609 HSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLA 668
+ TL DG TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+A
Sbjct: 396 KN-TL-DG-SGTVRGALKEHASALEEGKADILGLYMVQSLLEKGEITEGTLEDYYVTFMA 452
Query: 669 GCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTI 728
G FRSVRFG +HGK ++FN+ ++ AF D + V+ +K+ AVE+LS ILT+
Sbjct: 453 GIFRSVRFGASSAHGKANMIRFNFFAQQGAFEKTEDGMYRVNMEKMGAAVEALSELILTL 512
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD + + L++ + L L +LE +PVDI
Sbjct: 513 QGDGDYDGVAKLVETMGVIKPDLASDLARLEAASIPVDI 551
>gi|56461223|ref|YP_156504.1| Zn-dependent hydrolase [Idiomarina loihiensis L2TR]
gi|56180233|gb|AAV82955.1| Predicted Zn-dependent hydrolase [Idiomarina loihiensis L2TR]
Length = 554
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 313/580 (53%), Gaps = 72/580 (12%)
Query: 192 KENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN 251
++N E +++L Y L +L+ LS+ K+ + L+I A+ +MD +F+ Q + +
Sbjct: 32 QQNNYELVEGAEQRLDIYTPYQLKTDLSHLSNEQKKMVGLLIDASKIMDNLFWQQAFPGD 91
Query: 252 PV-LRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVN 310
L + ++E A + +IN PW L+ N+ FLT
Sbjct: 92 KQKLLNQVEEKARE---------FTVINYGPWDRLNNNQPFLT----------------- 125
Query: 311 GWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFN 370
G E KP GANFYP DM K EFE + L K S +T+++R E
Sbjct: 126 ---GFE-------DKPAGANFYPADMTKTEFE--NAELANKD-----SLYTLLRRNDEG- 167
Query: 371 LDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLH 430
+L +V YSE Y LT+A++LL +A D+A + L
Sbjct: 168 ---------------------ELKTVAYSEAYKESLTKAADLLRQAADLAENKDFSEYLR 206
Query: 431 SKADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
+ADAFLSN Y SD+AW+++ +++DV IGP E YED +FGYK FE+++ I+D +
Sbjct: 207 LRADAFLSNEYQPSDMAWMDMTGNDIDVVIGPIENYEDHLFGYKTAFESYVLIKDKAWSQ 266
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDE 547
+++ + + L L++ LP++ AYK++ A A + ++Y +G G +T+A NLPNDE
Sbjct: 267 RLEKYAEYLPQLQEGLPVEPAYKAEKPGANAQLNAYDVVYYAGHSNAGSKTIAINLPNDE 326
Query: 548 RIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG 607
+ ++GT + LKN +AKF IL PIA I EQ+E + F++FF + + HE HG+G
Sbjct: 327 EVQLEKGTRRLQLKNAMQAKFDKILVPIAAQLIVPEQREDITFNAFFANTMFHEVAHGLG 386
Query: 608 PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFL 667
+ TL D + TVR L+E SA+EE KADI+GL+ + L + +L + +K Y +F+
Sbjct: 387 IKN-TLND--KGTVRSALKEHASALEEGKADILGLYMVTQLFEQGVLAEGELKDYYTTFM 443
Query: 668 AGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILT 727
A FRSVRFG +HGK ++FN+ + AF ++ ++++ DK+ A+ SLS +ILT
Sbjct: 444 ASIFRSVRFGASSAHGKANMIRFNYFADAGAFDRNASGQYAINMDKMREAMNSLSEKILT 503
Query: 728 IQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+Q GD + L+ ++ LK L KL + +PVD+
Sbjct: 504 LQGDGDYNGVAELVATLGVVSPQLKADLDKLTDAGIPVDV 543
>gi|407682544|ref|YP_006797718.1| hypothetical protein AMEC673_03210 [Alteromonas macleodii str.
'English Channel 673']
gi|407244155|gb|AFT73341.1| hypothetical protein AMEC673_03210 [Alteromonas macleodii str.
'English Channel 673']
Length = 564
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 316/579 (54%), Gaps = 70/579 (12%)
Query: 193 ENTMERSLTL-QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN 251
E E++L + + +L Y V L ++L+ LSD + L L+I A+ +MD++F+ Q ++ +
Sbjct: 39 ETASEQTLIVDESRLSIYHGVDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFED 98
Query: 252 PVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNG 311
K+ +S D+ + IN PW L+ + FL+
Sbjct: 99 -------KDAFLSSISDEKVRHFAAINYGPWDRLNGDTPFLS------------------ 133
Query: 312 WKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNL 371
G E KA GA FYP DM+K EF + +KQ ++++KR NL
Sbjct: 134 --GYEDKA-------LGAEFYPHDMEKEEFA--TADFGDKQ-----GLYSMVKRDEAGNL 177
Query: 372 DSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHS 431
YSVPYSE + S L +AS+LL KA ++A S K+ L
Sbjct: 178 ----------------------YSVPYSEAFKSELMKASDLLKKASELAEDESFKQYLQL 215
Query: 432 KADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ 490
+++A LSN+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ I+D + +
Sbjct: 216 RSEALLSNDYLASDMAWMDMKTNPVELVIGPIESYEDQLFGYRAAFEAYVLIKDLAWSEK 275
Query: 491 VKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDER 548
+ + L L+Q LP+ AYK++ + A + +IY +G G +T+A NLPNDER
Sbjct: 276 LAKYAAFLPELQQGLPVTEAYKAEMPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDER 335
Query: 549 IVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGP 608
+ ++GT + LKN AKF IL PIAD I EQ+E + FD+FF + + HE HG+G
Sbjct: 336 VQLEKGTRRLQLKNAMRAKFDTILVPIADTLIVPEQREHITFDAFFANTMFHEVAHGLGI 395
Query: 609 HSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLA 668
+ DG TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+A
Sbjct: 396 KNTL--DG-SGTVRGALKEHASALEEGKADILGLYMVQSLLEKGEITEGTLEDYYVTFMA 452
Query: 669 GCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTI 728
G FRSVRFG +HGK ++FN+ ++ AF D + V+ +K+ AVE+LS ILT+
Sbjct: 453 GIFRSVRFGASSAHGKANMIRFNFFAQQGAFEKTKDGMYRVNMEKMGAAVEALSELILTL 512
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD + + L++ + L L +LE +PVDI
Sbjct: 513 QGDGDYDGVAKLVETMGVIKPDLASDLARLEAASIPVDI 551
>gi|406595581|ref|YP_006746711.1| hypothetical protein MASE_02995 [Alteromonas macleodii ATCC 27126]
gi|406372902|gb|AFS36157.1| hypothetical protein MASE_02995 [Alteromonas macleodii ATCC 27126]
Length = 564
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 316/579 (54%), Gaps = 70/579 (12%)
Query: 193 ENTMERSLTL-QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN 251
E E++L + + +L Y V L ++L+ LSD + L L+I A+ +MD++F+ Q ++ +
Sbjct: 39 ETASEQTLLVDESRLSIYHGVDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFED 98
Query: 252 PVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNG 311
K+ +S D+ + IN PW L+ + FL+
Sbjct: 99 -------KDAFLSSISDEKVRHFAAINYGPWDRLNGDTPFLS------------------ 133
Query: 312 WKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNL 371
G E KA GA FYP DM+K EF + +KQ ++++KR NL
Sbjct: 134 --GYEDKA-------LGAEFYPHDMEKEEFA--TADFGDKQ-----GLYSMVKRDEAGNL 177
Query: 372 DSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHS 431
YSVPYSE + S L +AS+LL KA ++A S K+ L
Sbjct: 178 ----------------------YSVPYSEAFKSELMKASDLLKKASELAEDESFKQYLQL 215
Query: 432 KADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ 490
+++A LSN+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ I+D + +
Sbjct: 216 RSEALLSNDYLASDMAWMDMKTNPVELVIGPIESYEDQLFGYRAAFEAYVLIKDLAWSEK 275
Query: 491 VKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDER 548
+ + L L+Q LP+ AYK++ + A + +IY +G G +T+A NLPNDER
Sbjct: 276 LAKYAAFLPELQQGLPVAEAYKAEMPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDER 335
Query: 549 IVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGP 608
+ ++GT + LKN AKF IL PIAD I EQ+E + FD+FF + + HE HG+G
Sbjct: 336 VQLEKGTRRLQLKNAMRAKFDTILVPIADTLIVPEQREHITFDAFFANTMFHEVAHGLGI 395
Query: 609 HSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLA 668
+ DG TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+A
Sbjct: 396 KNTL--DG-SGTVRGALKEHASALEEGKADILGLYMVQSLLEKGEITEGTLEDYYVTFMA 452
Query: 669 GCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTI 728
G FRSVRFG +HGK ++FN+ ++ AF D + V+ +K+ AVE+LS ILT+
Sbjct: 453 GIFRSVRFGASSAHGKANMIRFNFFAQQGAFEKTEDGMYRVNMEKMGAAVEALSELILTL 512
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD + + L++ + L L +LE +PVDI
Sbjct: 513 QGDGDYDGVAKLVETMGVIKPDLASDLARLEAASIPVDI 551
>gi|407686437|ref|YP_006801610.1| hypothetical protein AMBAS45_03245 [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407289817|gb|AFT94129.1| hypothetical protein AMBAS45_03245 [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 564
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 316/579 (54%), Gaps = 70/579 (12%)
Query: 193 ENTMERSLTL-QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSN 251
E E++L + + +L Y V L ++L+ LSD + L L+I A+ +MD++F+ Q ++ +
Sbjct: 39 ETASEQTLLVDESRLSIYHGVDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFED 98
Query: 252 PVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNG 311
K+ +S D+ + IN PW L+ + FL+
Sbjct: 99 -------KDAFLSSISDEKVRHFAAINYGPWDRLNGDTPFLS------------------ 133
Query: 312 WKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNL 371
G E KA GA FYP DM+K EF + +KQ ++++KR NL
Sbjct: 134 --GYEDKA-------LGAEFYPHDMEKEEFA--TADFGDKQ-----GLYSMVKRDEAGNL 177
Query: 372 DSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHS 431
YSVPYSE + S L +AS+LL KA ++A S K+ L
Sbjct: 178 ----------------------YSVPYSEAFKSELMKASDLLKKASELAEDESFKQYLQL 215
Query: 432 KADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQ 490
+++A LSN+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ I+D + +
Sbjct: 216 RSEALLSNDYLASDMAWMDMKTNPVELVIGPIESYEDQLFGYRAAFEAYVLIKDLAWSEK 275
Query: 491 VKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDER 548
+ + L L+Q LP+ AYK++ + A + +IY +G G +T+A NLPNDER
Sbjct: 276 LAKYAAFLPELQQGLPVAEAYKAEMPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDER 335
Query: 549 IVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGP 608
+ ++GT + LKN AKF IL PIAD I EQ+E + FD+FF + + HE HG+G
Sbjct: 336 VQLEKGTRRLQLKNAMRAKFDTILVPIADTLIVPEQREHITFDAFFANTMFHEVAHGLGI 395
Query: 609 HSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLA 668
+ DG TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+A
Sbjct: 396 KNTL--DG-SGTVRGALKEHASALEEGKADILGLYMVQSLLEKGEITEGTLEDYYVTFMA 452
Query: 669 GCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTI 728
G FRSVRFG +HGK ++FN+ ++ AF D + V+ +K+ AVE+LS ILT+
Sbjct: 453 GIFRSVRFGASSAHGKANMIRFNFFAQQGAFEKTEDGMYRVNMEKMGAAVEALSELILTL 512
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD + + L++ + L L +LE +PVDI
Sbjct: 513 QGDGDYDGVAKLVETMGVIKPDLASDLARLEAASIPVDI 551
>gi|407791345|ref|ZP_11138430.1| MutT/NUDIX family protein [Gallaecimonas xiamenensis 3-C-1]
gi|407200577|gb|EKE70583.1| MutT/NUDIX family protein [Gallaecimonas xiamenensis 3-C-1]
Length = 592
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 307/573 (53%), Gaps = 60/573 (10%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
LQ Q + V ++A + L+ +K+ + +IKAA +M +I+ QV NP +R + +
Sbjct: 73 LQAQRDKIVPVQMSANTSFLTAEEKQVVNKLIKAARLMSDIYLRQVNEQNPQIRAAIAQS 132
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
A++ L + + PW SL F +A
Sbjct: 133 GAANK--ALLLNMFDEHFGPWDSLAAGHPFFGDKANA----------------------- 167
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
PG+ FYP D+ K EF W + K + TS +TVI+R +
Sbjct: 168 -----PGSGFYPQDITKDEFNAWLAK-HPKDKAAFTSLYTVIRRDGD------------- 208
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
L ++PYS+ Y +L A++LL +A + S+PSLK L +A AF +++Y
Sbjct: 209 ----------KLVAIPYSQYYQEWLEPAAKLLEEAAAITSNPSLKHFLTLRAKAFRTDDY 258
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
+ S+IAW++L D+ ++V IGPYETY D +FGYK FEAF+ I+D KA+A++ F L+
Sbjct: 259 FQSEIAWMDLKDTPIEVAIGPYETYTDGLFGYKTAFEAFVTIKDPKASAKLDRFKKYLKD 318
Query: 501 LEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E NLP+ ++YK+ K +PI V I GD V G QT+AFNLPNDER+ + +G V
Sbjct: 319 MEANLPVADSYKNFKRGFESPIAVADQIQGGGDNVPGVQTIAFNLPNDERVREAKGAKKV 378
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
+L NV AKF+ I++P+A + EQ +L+D F + HE H +GP SI + +G+
Sbjct: 379 LLNNVMAAKFERIMKPMAAHILVPEQAKLLDQKYFGYETLFHELSHSLGPGSI-VKNGKA 437
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TV ELQEL+S EE KAD++G + + FL+ + LP + ++ ++ AG FRS+RFG+
Sbjct: 438 TTVAAELQELYSGTEEGKADVMGAYNILFLMKKGELPLAEKNNLLATYAAGLFRSMRFGV 497
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
E+HG G A Q+++ +K A + +DF K+E A+ L +++ +Q GD A
Sbjct: 498 HEAHGIGAAFQYSYFVDKGALNREKSGLYRIDFAKLEQAITDLVHDVVVLQGDGDYAKAK 557
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
L KY + ++ L +VPVDI P +
Sbjct: 558 AFLAKYGHVDDGVRAVNASLG--EVPVDIQPIY 588
>gi|395218875|ref|ZP_10402383.1| hypothetical protein O71_18733 [Pontibacter sp. BAB1700]
gi|394454059|gb|EJF08805.1| hypothetical protein O71_18733 [Pontibacter sp. BAB1700]
Length = 555
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 307/570 (53%), Gaps = 72/570 (12%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
LQ++L Y +V L A+L+GLS+ +++ + L+I+A +MDE+F+ + + L + L +
Sbjct: 42 LQQKLGMYTNVRLTADLSGLSEKERQMIPLLIEAGNIMDELFWYEAYGKKDSLLNALTDD 101
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
A + +IN PW L+ NE F+ P G
Sbjct: 102 A--------ARQFVMINYGPWDRLNNNEPFI---------------PGVG---------- 128
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
PKP ANFYP DM K EFE K++L +D S +T ++R + N
Sbjct: 129 --PKPDAANFYPQDMTKEEFE--KANL-----KDKASQYTFLRRDANGN----------- 168
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
L +VPY ++ + RAS+LL +A +A P LK+ L +ADA L++NY
Sbjct: 169 -----------LITVPYHVQFKEQVKRASDLLRQAAGLAEEPGLKKYLTLRADALLNDNY 217
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD+AW+++ ++ +DV IGP ETYED +FGYKA EA++ I+D + +++ + L
Sbjct: 218 QPSDLAWMDMKNNRIDVVIGPIETYEDKLFGYKAAHEAYVLIKDMDWSKRLEKYAAFLPE 277
Query: 501 LEQNLPMDNAYKSKD-VIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+ YK + + + ++Y +GD G +T+A NLPNDE + +GT +
Sbjct: 278 LQRGLPVPANYKKETPGTDSDLNAYDVVYYAGDCNAGSKTIAINLPNDEEVQLKKGTRRL 337
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN +AKF I+ PIAD I +Q++ + FD+FF + + HE HG+G + G
Sbjct: 338 QLKNAMQAKFDKIMLPIADELIADDQKQHITFDAFFANTMFHEVAHGLGIKNTINGKG-- 395
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L+E SA+EE KADI+GL+ + L + + SL + Y +F+AG FRSVRFG
Sbjct: 396 -TVREALKEHGSALEEGKADILGLYMITQLHKKGEVSGSL-EDYYTTFMAGIFRSVRFGA 453
Query: 679 EESHGKGQALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
+HGK ++FN+ E AF ++ + V++ K+ A++ LS ILT+Q GD
Sbjct: 454 ASAHGKANMVRFNFFKENGAFERDANTGKYRVNYVKMGEAMDKLSELILTLQGNGDYAGV 513
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
LL + ++ L+ L +L +PVD+
Sbjct: 514 GRLLNEQGQISTELQADLDRLSRNNIPVDV 543
>gi|85711182|ref|ZP_01042242.1| Predicted Zn-dependent hydrolase [Idiomarina baltica OS145]
gi|85695095|gb|EAQ33033.1| Predicted Zn-dependent hydrolase [Idiomarina baltica OS145]
Length = 561
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 305/562 (54%), Gaps = 70/562 (12%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 268
Y +L ++++ L+ K+ L L+I+AA +MD++F+ Q + + R +L S +
Sbjct: 56 YTDYTLTSDISHLTANQKDMLGLLIEAAKIMDDLFWQQAFAHDK--RSFL------SAVP 107
Query: 269 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 328
+ IN PW L+ ++ FL E+ KPPG
Sbjct: 108 SQAQSFADINYGPWDRLNGDKPFLR----------------------EFS-----EKPPG 140
Query: 329 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 388
ANFYP DM K EF S + + +T+I+R S +G
Sbjct: 141 ANFYPADMSKAEFNELDSDTKDSE-------YTLIRRDS--------AGQ---------- 175
Query: 389 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 448
L VPY+E Y + L +A++LL +A ++A P + L+ +ADAFLSN+Y SD+AW
Sbjct: 176 ----LKVVPYAEAYANELKQAAKLLRQAAELAEDPDFAKYLNLRADAFLSNDYRPSDLAW 231
Query: 449 IEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 507
+++ ++++D+ IGP ETYED +FGYK FEA++ I+D + + ++ + L L++ LP+
Sbjct: 232 MDMKNNDVDLVIGPIETYEDQLFGYKTAFEAYVLIKDKQWSDRLAKYAQFLPELQRGLPV 291
Query: 508 DNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
++ YK + A A + +Y +G G +T+A NLPNDE + ++GT + LKN
Sbjct: 292 EDKYKQEMPGANAQLNAYDAVYFAGHSNAGSKTIAINLPNDEYVQLEKGTRRLQLKNAMR 351
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKF ILRPIAD I EQ+E + FD+FF + + HE HG+G + + TVR L
Sbjct: 352 AKFDKILRPIADQLIVPEQRENITFDAFFANTMFHEVAHGLGIKNTI---NNKGTVRAAL 408
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
+E SA+EE KADI+GL+ + L + L ++ Y +F+A FRSVRFG +HGK
Sbjct: 409 KEHASALEEGKADILGLYMVTQLFEKGELTTGTLQDYYTTFMASIFRSVRFGASSAHGKA 468
Query: 686 QALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
++FN+ + AF ++D ++++ +K+ A+ SLS +IL +Q G+ + L+Q+
Sbjct: 469 NMIRFNYFANEGAFTRNADGQYAINMEKMRAAMTSLSKKILQLQGDGNYQGVGELVQRLG 528
Query: 746 TMTQPLKVALQKLENVQVPVDI 767
++ L+ L KL + +PVD+
Sbjct: 529 VISPQLQSDLDKLSDAGIPVDV 550
>gi|392546210|ref|ZP_10293347.1| hypothetical protein PrubA2_07527 [Pseudoalteromonas rubra ATCC
29570]
Length = 561
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 193/567 (34%), Positives = 302/567 (53%), Gaps = 69/567 (12%)
Query: 204 KQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHAD 263
++L Y V+LN++L+ L+D K+ L L+I A+ +MDE+F+ Q + N K
Sbjct: 50 ERLDIYTQVTLNSDLSHLNDNQKKMLGLLIDASKIMDELFWKQAFGMN-------KTEFL 102
Query: 264 ASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPL 323
A+ D + IN PW L+ ++ FL+ ++
Sbjct: 103 ANIQDPKVRQFADINYGPWDRLNGDKVFLSGFNA-------------------------- 136
Query: 324 PKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDAT 383
K PGA FYP D+ K E L + +D +++IKR DA
Sbjct: 137 -KAPGAEFYPGDISKDE-------LNQADVKDKAGLYSLIKR---------------DAQ 173
Query: 384 NHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYD 443
LYSVPYSE Y + L A++LL A +A + L+ +ADA ++N+Y
Sbjct: 174 GQ-------LYSVPYSEAYQNELNTAAQLLRDASKLAVDKQFSKYLNLRADALVNNSYQT 226
Query: 444 SDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
SD AW+++ ++ +DV IGP ETYED +FGY+ FE+++ ++D + ++ F L L+
Sbjct: 227 SDFAWMDMKNNPIDVVIGPIETYEDQLFGYRTAFESYVLVKDMAWSERLAKFAAFLPELQ 286
Query: 503 QNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVML 560
Q LP+D YK + + A + +IY +G G +T+A NLPNDE + +GT + L
Sbjct: 287 QGLPVDEQYKQEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLQKGTRRLQL 346
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
KN +AKF IL PIA+ I Q++ + FD+FF + + HE HG+G + G T
Sbjct: 347 KNAMQAKFDKILVPIAEQLIVPTQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG---T 403
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
VR LQE SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+AG FRSVRFG
Sbjct: 404 VRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYVTFMAGIFRSVRFGASS 463
Query: 681 SHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLL 740
+HGK ++FN+ ++ AF ++D ++VD +K+ A+E LS ILT+Q GD + L
Sbjct: 464 AHGKANMIRFNFFKQEGAFSKNADGLYAVDMEKMGAAMEKLSNLILTLQGDGDYQKVDQL 523
Query: 741 LQKYCTMTQPLKVALQKLENVQVPVDI 767
L + + L+ L KL +PVD+
Sbjct: 524 LATHGDIKAELQADLDKLAAANIPVDV 550
>gi|109897374|ref|YP_660629.1| hypothetical protein Patl_1049 [Pseudoalteromonas atlantica T6c]
gi|109699655|gb|ABG39575.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
Length = 562
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/566 (34%), Positives = 303/566 (53%), Gaps = 69/566 (12%)
Query: 205 QLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA 264
+L Y V L A+L+ LS K+ L L+I A+ +MD++F+ Q + N KE +
Sbjct: 49 RLDIYQSVPLTADLSSLSANQKQMLGLLIDASKIMDDLFWQQAYGDN-------KEQFLS 101
Query: 265 SELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLP 324
++ + IN PW L+ ++AFL+
Sbjct: 102 RIANESGRRFADINYGPWDRLNGDKAFLSQTSE--------------------------- 134
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
KP GA FYP DM K EFE KS +K T +++I R E
Sbjct: 135 KPVGAQFYPEDMSKTEFE--KSEFADK-----TGLYSMIVRDQE---------------- 171
Query: 385 HSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDS 444
GS L +VPY+E + L +A+ LL++A ++A P+ L +ADA LSN Y S
Sbjct: 172 ---GS---LKAVPYAEYFAEPLQQAASLLNEAAELADDPAFANYLRLRADALLSNEYQKS 225
Query: 445 DIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
D AW+++ S +++ IGP ETYED +FGY+A FEA++ ++D + ++ + L L+
Sbjct: 226 DFAWMDMKSNPIELVIGPIETYEDQLFGYRAAFEAYVLLKDLSWSERLSKYAAYLPELQT 285
Query: 504 NLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLK 561
NLP+ AYK + A A + +IY +G G +T+A NLPNDE++ ++GT + LK
Sbjct: 286 NLPVGEAYKKEMPGANADLNAYDVIYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQLK 345
Query: 562 NVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTV 621
N AKF+NIL PIA+ + EQ++ + FD+FF + + HE HG+G + +G TV
Sbjct: 346 NAMRAKFENILLPIANELMVPEQRKHITFDAFFANTMFHEVAHGLGVKNTINGNG---TV 402
Query: 622 RLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEES 681
R L+E SA+EE KADI+GL+ + L+ + ++ + ++ Y +F+AG FRSVRFG +
Sbjct: 403 RQALKEHASALEEGKADILGLYMVSQLLDKGVITEGEIEDYYTTFMAGIFRSVRFGASSA 462
Query: 682 HGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
HGK ++FN+ E AF + + + V+ K+ A+++LS ILT+Q GD S L+
Sbjct: 463 HGKANMIRFNFFQEYGAFSRNEEGLYQVNMAKMSKAIDALSRLILTLQGDGDYAGVSQLV 522
Query: 742 QKYCTMTQPLKVALQKLENVQVPVDI 767
+ + L L++L + +PVDI
Sbjct: 523 ADKGLIRETLATDLKRLTDANIPVDI 548
>gi|336316245|ref|ZP_08571145.1| Peptidase family M49 [Rheinheimera sp. A13L]
gi|335879367|gb|EGM77266.1| Peptidase family M49 [Rheinheimera sp. A13L]
Length = 571
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 308/569 (54%), Gaps = 69/569 (12%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
+K+L Y V L A+L+ +S K+ L +I A+ +MD++F+ Q + + + +L +
Sbjct: 58 FEKRLDIYRTVDLTADLSAVSAQHKQMLSKLIDASEIMDQLFWKQAFSEDK--QSFLGKI 115
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
DA K K + +N PW L N+AFLT +Y A
Sbjct: 116 TDA----KTK-AFADVNYGPWDRLQGNQAFLT----------------------DYPA-- 146
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP DM K EFE + D +++++R E G +V
Sbjct: 147 ---KPLGAQFYPSDMTKEEFE-------QTDFADKAGLYSMVQRDKE--------GKLV- 187
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+VPYS+ Y + LT A+ LL +A ++ L +A+AFL++NY
Sbjct: 188 -------------AVPYSQLYKTELTAAAVLLKEAAALSEDKDFANYLTMRAEAFLTDNY 234
Query: 442 YDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+ + + +D+ IGP ETYED +FGY+A FE+++ ++D + ++ + L
Sbjct: 235 QPSDFAWMAMKTNPVDLVIGPIETYEDQLFGYRAAFESYVLLKDLAWSERLAKYAATLPA 294
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+ YK++ + A + +IY +G G +T+A NLPNDE++ ++GT +
Sbjct: 295 LQKGLPVPEQYKTESPGSDADLNAYDVIYYAGHSNSGGKTIAINLPNDEQVQLEKGTRRL 354
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN +AKF++I+ PIADV I Q++ + FD+FF + + HE HG+G + T+ D +
Sbjct: 355 QLKNAMQAKFEHIMLPIADVLIAPSQRQHITFDAFFNNVMFHEVAHGLGIKN-TIND--K 411
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L+E +EE KADI+GL+ + L + LLP + ++ Y +F+AG FRSVRFG
Sbjct: 412 GTVRQSLKEFAGGLEEGKADILGLYMISQLSEQGLLPDAKMEDFYTTFMAGIFRSVRFGA 471
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK + FN+ E+ AF+ + D T+ VDF K++ A+ SLS ILT+Q G+ E +
Sbjct: 472 SSAHGKANMVCFNYFAEQGAFVRNDDGTYQVDFVKMKQAMTSLSQLILTLQGDGNYEGVA 531
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + L L +L + +PVDI
Sbjct: 532 SLMADKGVIKAQLADDLARLTSANIPVDI 560
>gi|442609018|ref|ZP_21023759.1| Nudix hydrolase 3 [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441749630|emb|CCQ09821.1| Nudix hydrolase 3 [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 559
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 315/585 (53%), Gaps = 69/585 (11%)
Query: 186 IISQRYKENTMERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYL 245
I +Q +++ E + T + +L Y V L+A+L+ LS+ K+ +V +I A+ +MD++++
Sbjct: 30 IENQSAEKHGYELTHTDRARLNIYTEVELSADLSHLSETQKQMIVKLIDASKIMDDLYWK 89
Query: 246 QVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDA 305
Q + N D+L A+ D + IN PW L+ ++ FL
Sbjct: 90 QAFGLNKA--DFL-----AAIKDPAVKQFADINYGPWDRLNGDKPFL------------- 129
Query: 306 TKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKR 365
NG+ K GA FYP D+ K E L + D T ++V++R
Sbjct: 130 ----NGFA----------EKALGAEFYPHDVSKEE-------LNASKVNDKTGLYSVVRR 168
Query: 366 RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSL 425
+ +L+S+PYS+ Y + L+ A++LL +A ++ S
Sbjct: 169 DEKG----------------------ELFSIPYSQAYQAELSEAAKLLREASKLSEDTSF 206
Query: 426 KRLLHSKADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRD 484
L +ADA LS+ Y SD AW+++ + +DV IGP ETYED +FGY+A FE+++ I+D
Sbjct: 207 ANYLTMRADALLSDEYQASDFAWMDMKTNPIDVVIGPIETYEDQLFGYRAAFESYVLIKD 266
Query: 485 DKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFN 542
+ ++ F L L++ LP+D YK + + A + +IY +G G +T+A N
Sbjct: 267 MAWSERLAKFAAFLPELQKGLPVDEKYKQEIPGSDADLNAYDVIYYAGHSNAGSKTIAIN 326
Query: 543 LPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHEC 602
LPNDE++ ++GT + LKN AKF I+ PIA+ I EQ++ + FD+FF + + HE
Sbjct: 327 LPNDEQVQLEKGTRRLQLKNAMRAKFDKIMVPIAEQLIVPEQRKHITFDAFFANTMFHEV 386
Query: 603 CHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSM 662
HG+G + T+ D + TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++
Sbjct: 387 AHGLGIKN-TITD--KGTVRQSLQEHASALEEGKADILGLYMVEQLLKQGEITEGTLEDY 443
Query: 663 YVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLS 722
Y++F+AG FRSVRFG +HGK ++FN+ E+ AF + + VD +K+ A+ESLS
Sbjct: 444 YITFMAGIFRSVRFGASSAHGKANMIRFNYFAEQGAFSRNEAGLYQVDMEKMAAAMESLS 503
Query: 723 TEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
ILTIQ GD E S L+ + + L+ L +L +PVD+
Sbjct: 504 QLILTIQGDGDYERVSALIASHGDIKTQLEADLARLAAANIPVDV 548
>gi|389784195|ref|ZP_10195374.1| hypothetical protein UU7_15685 [Rhodanobacter spathiphylli B39]
gi|388433643|gb|EIL90607.1| hypothetical protein UU7_15685 [Rhodanobacter spathiphylli B39]
Length = 578
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 198/579 (34%), Positives = 308/579 (53%), Gaps = 74/579 (12%)
Query: 197 ERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRD 256
E ++K L YA V L A+L+ ++ + L+++AA M+ +++ Q W L
Sbjct: 52 ESVAAVRKHLADYATVKLTADLSKFDAQQQQMIALLVEAADSMNALYWKQGWGDRDAL-- 109
Query: 257 WLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLE 316
L + +D S + + IN PW LD ++ F V+G
Sbjct: 110 -LAKISDPSVRE-----FAEINYGPWDRLDNDKPF-----------------VDGIG--- 143
Query: 317 YKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLS 376
P+P GA FYP DM K +FE +S L +K T +T+++R +
Sbjct: 144 -------PRPAGAQFYPADMTKEQFE--QSPLKDK-----TGLYTLLRRDDK-------- 181
Query: 377 GHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAF 436
G ++ SVPY E Y + L + + LL +A +A ++ L +ADA
Sbjct: 182 GQLI--------------SVPYHEAYKAELEKTAGLLREAAKLAKDAGFRKYLTMRADAL 227
Query: 437 LSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFG 495
LS++Y SD AW+++ S +D+ IGP ETYED +FGYKA++E+++ I+D +A++ F
Sbjct: 228 LSDDYQASDFAWMDMKSNPVDIVIGPIETYEDQLFGYKASYESYVLIKDQAWSAKLARFA 287
Query: 496 DNLQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDR 553
L L++ LP+ + YK+ K A + IY GD G +T+A NLPNDE++ R
Sbjct: 288 KYLPELQRGLPVADKYKAEKPGSDADLNAYFAIYYGGDANVGAKTIAINLPNDEQVQLKR 347
Query: 554 GTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
GT + L+NV +AKF I+ PI I +QQ+ + FD+FF + + HE HG+G ++
Sbjct: 348 GTRRLQLENVMQAKFDKIMLPIGHELIADDQQKNLTFDAFFQNTMFHEVAHGLGIKNVLD 407
Query: 614 PDGRQS--TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCF 671
G S TVR L++ S+ EE KADI+GL+ + L + L KS + YV+FLAG
Sbjct: 408 KSGLDSKVTVRKALKDQASSFEEGKADILGLYMVSKLADKGELDKSRLMDNYVTFLAGIL 467
Query: 672 RSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDT---FSVDFDKVEGAVESLSTEILTI 728
RSVRFG ++H K ++FN+ ++ AF D+T + VDFDK+ A+ +LS ++LTI
Sbjct: 468 RSVRFGASDAHAKANMVRFNFFKQQGAF--SRDETTGRYRVDFDKMTAAMNALSAKLLTI 525
Query: 729 QARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
Q GD EAA L ++ + L L++L+ +PVDI
Sbjct: 526 QGDGDYEAAKQLTEQMGNVDAQLAGDLKRLDQAHIPVDI 564
>gi|407792661|ref|ZP_11139698.1| Zn-dependent hydrolase [Idiomarina xiamenensis 10-D-4]
gi|407217774|gb|EKE87606.1| Zn-dependent hydrolase [Idiomarina xiamenensis 10-D-4]
Length = 559
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 300/567 (52%), Gaps = 80/567 (14%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPV-----LRDWLKEHAD 263
YA V L + L+ LS+ ++ + +I AA +MD++F+ Q +Y + L +K AD
Sbjct: 54 YAPVELTSSLSHLSNQQQQLVGKLIDAAKIMDDLFWQQAYYGDKSELLNGLDGKVKNFAD 113
Query: 264 ASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPL 323
IN PW L+ + FL+ D
Sbjct: 114 -------------INYGPWDRLNNEKPFLSGFDE-------------------------- 134
Query: 324 PKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDAT 383
K GANFYP D+ K EFE + KQ S +T+++R DA
Sbjct: 135 -KAAGANFYPQDLTKAEFE--AADFDGKQ-----SLYTLVRRN--------------DAG 172
Query: 384 NHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYD 443
+LYSVPYSE Y + L +A++ L +A +A S + + L +ADA +SN+Y
Sbjct: 173 --------ELYSVPYSEAYAAPLKQAAQYLREAAQLAESEAFAKYLTMRADALVSNDYQP 224
Query: 444 SDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
SD AW+++ D+++DV IGP ETYED ++GY+A FEA++ ++D + ++ + L L+
Sbjct: 225 SDFAWMDMSDNKIDVVIGPIETYEDQLYGYRAAFEAYVLVKDLAWSEKLAKYAQYLPQLQ 284
Query: 503 QNLPMDNAYKSK-DVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVML 560
+ LP+ + YK + A + ++Y +G G +T+A NLPNDE++ +GT + L
Sbjct: 285 RELPVADEYKQEVPGSGAQLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLQKGTRRLQL 344
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
KN AKF IL PIAD I +Q++ + FD+FF + + HE HG+G + T+ D + T
Sbjct: 345 KNAMRAKFDKILLPIADQLIAPDQRQHITFDAFFANTMFHEVAHGLGIKN-TIND--KGT 401
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
VR L+E SA+EE KADI+GL+ + L+ + +L ++ Y +FLAG FRSVRFG
Sbjct: 402 VRAALKEHASALEEGKADILGLYMVTQLVEQGVLTDGKLEDYYTTFLAGIFRSVRFGASS 461
Query: 681 SHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLL 740
+HGK ++FN+ +K AF D + V+ +K+ A+ LS ILT+Q GD + L
Sbjct: 462 AHGKANMIRFNYFADKGAFSRTEDGHYRVNMEKMRQAMTDLSALILTLQGDGDYQGVDQL 521
Query: 741 LQKYCTMTQPLKVALQKLENVQVPVDI 767
++ + + L L +L + +PVDI
Sbjct: 522 FKQQGNIGEQLAADLTRLSDADIPVDI 548
>gi|410634004|ref|ZP_11344644.1| nudix hydrolase 3 [Glaciecola arctica BSs20135]
gi|410146664|dbj|GAC21511.1| nudix hydrolase 3 [Glaciecola arctica BSs20135]
Length = 530
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 301/568 (52%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+ +L Y V+L+A++ LSD ++ L ++I+A+ +MD++F+ Q + N K+
Sbjct: 18 ENRLNIYFPVTLSADIDHLSDNQRQMLAILIEASVIMDDLFWRQAFGDN-------KDTF 70
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A+ D + IN PW LD ++ FL+ D
Sbjct: 71 LAAIADNKTQNFANINYGPWDRLDGDQVFLSNTDE------------------------- 105
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP DM K EFE S+ +K +++++R
Sbjct: 106 --KPLGAQFYPADMTKTEFE--ASNFADK-----NGLYSMVRR----------------- 139
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
+ L ++PYS + L AS LL KA +A S L +A+A L+NNY
Sbjct: 140 -----DKMGQLIAIPYSTYFAEELKEASTLLTKAATLAEDKSFAAYLKLRAEALLTNNYQ 194
Query: 443 DSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ + +++ GP ETYED +FGY+A FE+++ ++D + ++ + L L
Sbjct: 195 PSDYAWMDMKTNPIELVYGPIETYEDQLFGYRAAFESYVLLKDLAWSERLSKYASFLPEL 254
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+Q LP++ YK++ A A + +IY +G G +T+A NLPNDE + +GT +
Sbjct: 255 QQGLPVEEKYKAQMPGANADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKKGTRRLQ 314
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF NIL PI+ I EQ++ + F +FF + + HE HG+G S+ G +
Sbjct: 315 LKNAMRAKFDNILVPISKQLIVPEQRQHITFSAFFANTMFHEVAHGLGIKSVL---GSEQ 371
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR L+E SA+EE KADI+GL+ ++ L+ + ++ + +++ YV+F+AG FRSVRFG
Sbjct: 372 TVRQALKEHASALEEGKADILGLYMVQQLLAKGVIEEGMLEDYYVTFMAGIFRSVRFGAS 431
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ + +AF + D + VD + A+++LS +ILT+Q GD E +
Sbjct: 432 SAHGKANMIRFNFFQDHQAFSRNEDGLYQVDMQNMSKAIDALSNKILTLQGDGDYEGVTK 491
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L+ L +L +PVD+
Sbjct: 492 LVAEKGVIKALLQQDLDRLTAADIPVDV 519
>gi|392556133|ref|ZP_10303270.1| hypothetical protein PundN2_11892 [Pseudoalteromonas undina NCIMB
2128]
Length = 566
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 306/569 (53%), Gaps = 71/569 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD K + +I A+ +MD++F+ Q + + +D+L
Sbjct: 53 RQRLDIYTDFSLQSDLSHLSDNQKAMVAKLIDASKIMDDLFWKQAFGKDK--QDFL---- 106
Query: 263 DASELDKLKWMYYL-INKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
++LD K + IN PW L+ +E FL+ G+K
Sbjct: 107 --AQLDDEKVRQFADINYGPWDRLNGDEVFLS-----------------GYK-------- 139
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP D+ K E L +D T +++IKR
Sbjct: 140 --EKPLGAGFYPADITKEE-------LNNADVKDKTGLYSLIKRDE-------------- 176
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+ +LYS PYSEEY S L +A+ELL +A +A L+ +ADA S+++
Sbjct: 177 --------LGNLYSTPYSEEYASELAQAAELLREASKLADDKEFANYLNLRADAIQSDDF 228
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+++ ++ +DV IGP E YED +FGY+A +E+++ I+D K + ++ F L
Sbjct: 229 QASDFAWMDMKNNPIDVVIGPIENYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPE 288
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 289 LQKGLPVDSKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRL 348
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 349 QLKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTLTGKG-- 406
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 -TVRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYTTFMAGIFRSVRFGA 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK ++FN+ ++ AF + D +S++ DK+ A+ LS ILT+Q GD E
Sbjct: 466 SSAHGKANMIRFNFFAQEGAFSKNEDGLYSINMDKMGDAMAKLSRLILTLQGDGDYEKVD 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L L+KL +PVD+
Sbjct: 526 QLIATHGDIKAELAKDLEKLSKANIPVDV 554
>gi|325954074|ref|YP_004237734.1| hypothetical protein [Weeksella virosa DSM 16922]
gi|323436692|gb|ADX67156.1| hypothetical protein Weevi_0437 [Weeksella virosa DSM 16922]
Length = 552
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 304/562 (54%), Gaps = 72/562 (12%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 268
YA V L +++ LS +KE L L+IKA+ +MD++F+ Q + + L D K
Sbjct: 49 YASVPLTMDISTLSTNEKEVLKLMIKASEIMDDLFWQQAYGAKVDLMDATKGEQKN---- 104
Query: 269 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 328
Y IN PW ++ + +F+ +G+ PKP G
Sbjct: 105 -----YAKINYGPWDRMNNDASFV--------------------EGIG-------PKPLG 132
Query: 329 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 388
+ FYP DM K EFE ++L D S +TV++R +G
Sbjct: 133 STFYPTDMTKAEFE--AANLV-----DGKSNYTVVRRDR--------AGK---------- 167
Query: 389 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 448
LY++PY Y + L +A+ELL KA ++ LK L +A + L++++Y SD+AW
Sbjct: 168 ----LYTIPYHVLYKNQLQKAAELLVKASELTKDKELKNYLFLRATSLLNDDFYTSDLAW 223
Query: 449 IEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 507
+++ ++ LD+ IGP ETYED +FGYKA++EA++ ++D + + ++ F L L+ NLP+
Sbjct: 224 MDMKNNRLDLVIGPIETYEDQLFGYKASYEAYVLVKDMEWSKKLAKFVQYLPELQANLPV 283
Query: 508 DNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
D YK+ K + + ++Y +GD G +T+A NLPNDER+ ++GT + LKN +
Sbjct: 284 DAKYKTEKPGTDSDLNAYDVVYYAGDCNAGGKTIAINLPNDERVQLEKGTRRLQLKNAMQ 343
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKF IL PIA+ I QQ+ V FD+FF + + HE HG+G + G TVR L
Sbjct: 344 AKFDKILLPIAEELIDPSQQKNVKFDAFFANVMFHEVAHGLGIKNTINGKG---TVREAL 400
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
QE S++EE KADI+GL+ + L+ + L + + +V+FLAG RSVRFG +HG+
Sbjct: 401 QETQSSLEEGKADILGLYMVNQLLAKQEL-EGTQEDYFVTFLAGILRSVRFGASSAHGQA 459
Query: 686 QALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
+ FN+ E+ AF+ +++ + VD K+E A+ LS IL +Q GD + L Q+
Sbjct: 460 NMVCFNYFQEQGAFVKTANNHYRVDVPKMEKAMHGLSALILKLQGDGDYDGVVKLNQEKG 519
Query: 746 TMTQPLKVALQKLENVQVPVDI 767
++ L+ L +L+ +PVDI
Sbjct: 520 KISADLQKDLDRLKAKNIPVDI 541
>gi|336172788|ref|YP_004579926.1| hypothetical protein [Lacinutrix sp. 5H-3-7-4]
gi|334727360|gb|AEH01498.1| hypothetical protein Lacal_1650 [Lacinutrix sp. 5H-3-7-4]
Length = 548
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 302/573 (52%), Gaps = 71/573 (12%)
Query: 198 RSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDW 257
++ ++ +L +Y V L A+L+ LS+ +K+ L L+I AA M+++F+ + + +L
Sbjct: 32 QNTAMETKLDKYVSVKLTADLSVLSENEKQMLPLLIDAANKMNDLFWYESYGDQDLLLTS 91
Query: 258 LKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEY 317
+K+ A + + IN PW LD N+ F+
Sbjct: 92 IKDEATKA--------FVKINYGPWDRLDNNKPFVEGIGE-------------------- 123
Query: 318 KASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSG 377
K GANFYP D+ K EFE E+ +S + ++R E NL
Sbjct: 124 -------KQKGANFYPKDITKEEFE-------NASMENKSSIYNFVRRDKEGNL------ 163
Query: 378 HIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFL 437
Y++PY E++ + S LL +A +A LK+ L +A+A L
Sbjct: 164 ----------------YTIPYHEQFKEEVKEVSNLLIEASRLAEDKGLKKYLELRAEALL 207
Query: 438 SNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGD 496
+NY SD+AW+++ ++ LD+ IGP ETYED +FG KA E ++ I+D + +++ F
Sbjct: 208 DDNYQQSDLAWMDMKNNTLDIVIGPIETYEDQLFGNKAAHEGYVLIKDQAWSEKLEKFSS 267
Query: 497 NLQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRG 554
L L++ LP+ + YK+ K + + +++ +GD G +T+A NLPNDE + ++G
Sbjct: 268 FLPELQKGLPVGDKYKTEKPGTDSDLNAYDVVFYAGDCNAGSKTIAINLPNDEEVQLEKG 327
Query: 555 TSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLP 614
T + LKN +AKF IL PI+ V I + Q++ + FD+FF + + HE HG+G +
Sbjct: 328 TRRLQLKNAMQAKFDKILMPISKVLIDESQRQHITFDAFFENTMFHEVAHGLGIKNTING 387
Query: 615 DGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSV 674
G TVR L+E SA+EE KADI+GL+ ++ L + L L +M V+F+AG FRSV
Sbjct: 388 KG---TVRTALKEYASALEEGKADILGLYMVEQLHSKGELTNDLKDNM-VTFMAGIFRSV 443
Query: 675 RFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDK 734
RFG +HGK ++FN+ + AF + + T+ V+F K+E A+++LS IL Q GD
Sbjct: 444 RFGASSAHGKANMIRFNFFKQMGAFSRNENGTYKVNFSKMELAMQTLSEVILNYQGDGDY 503
Query: 735 EAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+ + + Y + + L+ L +L + +PVD+
Sbjct: 504 DGVAKFVSNYGNIGEVLQNDLNRLSDANIPVDV 536
>gi|452752143|ref|ZP_21951887.1| Nudix hydrolase 3 [alpha proteobacterium JLT2015]
gi|451960663|gb|EMD83075.1| Nudix hydrolase 3 [alpha proteobacterium JLT2015]
Length = 562
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 310/567 (54%), Gaps = 66/567 (11%)
Query: 210 AHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELDK 269
A V +N + + L+ +++ + L+I AA +M EI+ Q + NP +R + D L
Sbjct: 53 APVEMNPDTSFLNAEERQVVNLLIDAAEMMREIYLRQAYARNPEVRAAIAASGDTQAL-- 110
Query: 270 LKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGA 329
+ ++ PW +L+E F W P P GA
Sbjct: 111 ---AMFDLHMGPWDTLNEKHPF--------------------WGDT--------PAPEGA 139
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGS 389
FYP D+ + E + + ++ +++ + +TV++R+ E
Sbjct: 140 GFYPEDLTRQELDAYLAA-HPNEKDSILNGYTVVRRQGE--------------------- 177
Query: 390 IYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWI 449
L +VPYSE Y +L A+ L +A + S+ SLKR L +ADAFLSN+YY+S++AW+
Sbjct: 178 --RLVAVPYSEAYAEWLRPAAAKLREAAAITSNASLKRFLTLRADAFLSNDYYESELAWM 235
Query: 450 ELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMD 508
++ + +++ IGPYE Y D ++G K FEAF+ +++ + A++ + L+ +E NLP+
Sbjct: 236 DVSGTPIEMVIGPYEVYTDELYGQKTAFEAFVTLQNPEEAAKLSHYKALLKDMEANLPVA 295
Query: 509 NAYKS--KDVIAAPIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
+ YK+ +D +PI V + ++ GD +G QT+AFNLPNDER+ + +G V+L+NV
Sbjct: 296 DGYKNFERD-FNSPILVAEQVHGGGDNERGVQTIAFNLPNDERVREAKGAKKVILENVLG 354
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AK+ IL P+A + ++ + V + HE H +GP +I + +GR++TV EL
Sbjct: 355 AKYDRILVPLAKLVLQPQAAAQVSKQYMTLFTLFHELAHSLGPGTIMV-EGRETTVGAEL 413
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
+E++SA EEAKADI+G+W L +++ R LP + + ++ AG FR +RFG++E+HG+G
Sbjct: 414 KEVYSASEEAKADIMGMWNLLYMMERGELPAAEQSELLATYAAGLFRGMRFGIDEAHGRG 473
Query: 686 QALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
ALQ+ W+ +K A + + F VD +K+ A+ESL+ I+T+Q GD ++
Sbjct: 474 AALQYRWMRDKGALVWDEEAGRFRVDEEKMVAAIESLTARIVTLQGDGDYAGMKAFFEET 533
Query: 745 CTMTQPLKVALQKLENVQVPVDIAPTF 771
+ P ++ + +++ VP+DI P +
Sbjct: 534 ARLDGPARMVIASMDS--VPIDIQPIY 558
>gi|410625615|ref|ZP_11336391.1| nudix hydrolase 3 [Glaciecola mesophila KMM 241]
gi|410154825|dbj|GAC23160.1| nudix hydrolase 3 [Glaciecola mesophila KMM 241]
Length = 562
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 303/566 (53%), Gaps = 69/566 (12%)
Query: 205 QLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA 264
+L Y V L A+L+ LS K+ L L+I A+ +MD++F+ Q + S+ +L A
Sbjct: 49 RLDIYQSVPLTADLSSLSANQKQMLGLLIDASKIMDDLFWQQAYGSDKA--QFLARIA-G 105
Query: 265 SELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLP 324
++ K + IN PW L+ ++ FLT
Sbjct: 106 DDVQK----FAAINYGPWDRLNGDKPFLTNTKE--------------------------- 134
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
KP GA FYP DM K EFE KS +K T ++++ R +
Sbjct: 135 KPLGAQFYPEDMGKAEFE--KSEFADK-----TGLYSMVIRDRD---------------- 171
Query: 385 HSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDS 444
GS L +VPY+E + L +A+ LL++A ++A P+ L +ADA LSN Y S
Sbjct: 172 ---GS---LIAVPYAEYFAKPLQQAASLLNEAAELAGDPAFANYLRLRADALLSNEYQKS 225
Query: 445 DIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
D AW+++ S +++ IGP ETYED +FGY+A FEA++ ++D + ++ + L L+
Sbjct: 226 DFAWMDMKSNPIELVIGPIETYEDQLFGYRAAFEAYVLLKDLSWSERLSKYAAYLPELQT 285
Query: 504 NLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLK 561
NLP+ AYK + A A + +IY +G G +T+A NLPNDE++ ++GT + LK
Sbjct: 286 NLPVGEAYKKEMPGANADLNAYDVIYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQLK 345
Query: 562 NVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTV 621
N AKF+NIL PIA+ + EQ++ + FD+FF + + HE HG+G + G TV
Sbjct: 346 NAMRAKFENILLPIANELMVPEQRKHITFDAFFANTMFHEVAHGLGIKNTINGKG---TV 402
Query: 622 RLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEES 681
R L+E SA+EE KADI+GL+ + L+ + ++ + ++ Y +F+AG FRSVRFG +
Sbjct: 403 RQALKEHASALEEGKADILGLYMVSQLLDKGVITEGEIEDYYATFMAGIFRSVRFGASSA 462
Query: 682 HGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
HGK ++FN+ E AF + + + V+ K+ A+++LS ILT+Q GD S L+
Sbjct: 463 HGKANMIRFNFFQEYGAFSRNKEGLYQVNMAKMSKAIDALSKLILTLQGDGDYAGVSQLV 522
Query: 742 QKYCTMTQPLKVALQKLENVQVPVDI 767
+ + L L++L + +PVDI
Sbjct: 523 TDKGVIKETLAADLKRLTDANIPVDI 548
>gi|389805886|ref|ZP_10203032.1| hypothetical protein UUA_01564 [Rhodanobacter thiooxydans LCS2]
gi|388446707|gb|EIM02728.1| hypothetical protein UUA_01564 [Rhodanobacter thiooxydans LCS2]
Length = 569
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 307/573 (53%), Gaps = 71/573 (12%)
Query: 199 SLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWL 258
S +QK L YA V L A+L+ K+ + L+++AA M+ +++ Q W L L
Sbjct: 50 STAVQKHLADYATVKLTADLSKFDARQKKMIALLVEAADSMNALYWKQAWGDRDAL---L 106
Query: 259 KEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYK 318
++ AD + + + IN PW+ LD ++ F+ +
Sbjct: 107 QKIADPATRE-----FAEINYGPWNRLDNDKPFVDGVGA--------------------- 140
Query: 319 ASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGH 378
+P GA FYP DM K EF+ S L +K T+ +T+++R ++ G
Sbjct: 141 ------RPLGAQFYPADMTKAEFD--ASPLKDK-----TALYTLLRRDAQ--------GQ 179
Query: 379 IVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLS 438
+V +VPY E Y + L + + LL +A +A ++ L +ADA LS
Sbjct: 180 LV--------------TVPYHEAYKAELEKTAGLLRQAAKLAKDAGFRKYLMLRADALLS 225
Query: 439 NNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDN 497
++Y SD AW+++ + +D+ IGP ETYED ++GYKA++E+++ I+D +A++ F
Sbjct: 226 DDYQASDFAWMDMKHNPIDLVIGPIETYEDQLYGYKASYESYVLIKDQAWSAKLARFAKY 285
Query: 498 LQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGT 555
L L++ LP+ + YK++ A A + +Y GD G +T+A NLPNDE++ +GT
Sbjct: 286 LPELQRELPVADKYKAEKPGADADLNAYFAVYYGGDANAGAKTIAINLPNDEQVQLKKGT 345
Query: 556 SMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD 615
+ L+NV +AKF+ I+ PIA I +QQ + FD+FF + + HE HG+G D
Sbjct: 346 RRLQLENVMQAKFEQIMLPIARELIADDQQHNLSFDAFFQNTMFHEVAHGLGIKETL--D 403
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVR 675
G+ TVR L++ S+ EE KADI+GL+ + L + L K+ + YV+FLAG RSVR
Sbjct: 404 GK-GTVRKALKDQASSFEEGKADILGLYMVTKLADKGELDKAKLMDNYVTFLAGILRSVR 462
Query: 676 FGLEESHGKGQALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDK 734
FG ++H K ++FN+ ++ AF + + VDFDK+ A+ +LS ++LTIQ GD
Sbjct: 463 FGASDAHAKANMVRFNFFKQQGAFSRDENTGRYRVDFDKMTAAMNALSAKLLTIQGNGDY 522
Query: 735 EAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
EAA L + + L L++L+ +PVDI
Sbjct: 523 EAAKQLTDQMGAVDAELAGDLKRLDQAHIPVDI 555
>gi|290997349|ref|XP_002681244.1| hypothetical protein NAEGRDRAFT_77250 [Naegleria gruberi]
gi|284094867|gb|EFC48500.1| hypothetical protein NAEGRDRAFT_77250 [Naegleria gruberi]
Length = 680
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 307/600 (51%), Gaps = 76/600 (12%)
Query: 202 LQKQLRRYAHVSL--NAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLK 259
+Q L +Y+ V L +S + + KAA VM EI+ Q+W N LR +
Sbjct: 85 VQDHLNKYSTVVLEQTTSYTQISTEYSAVITQLKKAADVMGEIYRDQMWSENSHLRAEIL 144
Query: 260 EHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKA 319
A + L + +N PW + +E+F+ + A KP K
Sbjct: 145 PTACHGKPLAL----FDLNFGPWVRVSNDESFVKEPFDFL-----AEKP---------KH 186
Query: 320 SFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHI 379
P K GA FYP ++ + E + W + L +ATSF+TVIK S
Sbjct: 187 EVPEKKLAGAAFYPENVTESEIKEWINELDSTAHAEATSFYTVIKESSG----------- 235
Query: 380 VDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPS---LKRLLHSKADAF 436
L V YS +Y L +A + LH A ++ ++P LK L +ADAF
Sbjct: 236 ------------KLTPVKYSTQYEKKLAKAVKYLHAAANLLTNPKDSYLKSFLQLRADAF 283
Query: 437 LSNNYYDSDIAWIEL---DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKL 493
SNNY SDIAW+ + +S L+VTIGPYETY+D + G KA FEA+IG +D +T + +
Sbjct: 284 TSNNYELSDIAWLNMTDSNSVLEVTIGPYETYDDELMGLKAAFEAYIGYKDSDSTKFINV 343
Query: 494 FGDNLQVLEQNLPMDNA-YKSKDVIAA-PIRVIQLIYNSGDVKGP-QTVAFNLPNDERIV 550
NLQ +E LPMD Y + V A IRVI IY G G + VA+ LPN E I+
Sbjct: 344 VLANLQAIETGLPMDTTKYPVRSVGAINSIRVINQIYAGGQANGAIKAVAYTLPNTESII 403
Query: 551 KDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHS 610
+ G+ V+LKNV +AKF NIL PI+ + I QQ V F++FFT + HE HG+GP
Sbjct: 404 EQYGSKRVLLKNVQKAKFNNILLPISKLVISSAQQNFVIFNAFFTQVLAHEMMHGLGPQK 463
Query: 611 ITLPDGRQS--TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLL-------------P 655
+ +G ++ T+R L + +S +EE KADI GLW L +++ ++ P
Sbjct: 464 V-FENGAETSKTLREALGKYYSPIEELKADIGGLWMLSYMMDSNITTIDFGLSSVDATAP 522
Query: 656 KSLV--KSMYVSFLAGCFRSVRFGLEES-HGKGQALQFNWLFEKEAFIL---HSDDTFSV 709
+++ K++Y +FLAG FRSVRFG+ ES H A+ FN++ K A + S F+V
Sbjct: 523 ANVLAKKALYTTFLAGIFRSVRFGVSESAHAMANAVAFNYMRAKGAITVSQESSKTVFAV 582
Query: 710 DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKL--ENVQVPVDI 767
+ ++ E A+ L +L IQA GD + A LL+++ +T +K + + E +PVDI
Sbjct: 583 NTNEFESAMTKLLETVLEIQAEGDYDDAKSLLEEHGIVTDEMKKIFEGMTSEESTIPVDI 642
>gi|359440701|ref|ZP_09230614.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20429]
gi|358037407|dbj|GAA66863.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20429]
Length = 566
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 303/574 (52%), Gaps = 81/574 (14%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNP------VLRD 256
+++L Y SL ++L+ LSD + + +I A+ +MDE+F+ Q + N + D
Sbjct: 53 KQRLDIYTDFSLQSDLSHLSDNQRAMVAKLIDASKIMDELFWKQAFGENKDAFLAKLNDD 112
Query: 257 WLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLE 316
++E AD IN PW L+ +EAFL++
Sbjct: 113 KVREFAD-------------INYGPWDRLNGDEAFLSS---------------------- 137
Query: 317 YKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLS 376
YK KP GA FYP D+ K E L ED T ++VIKR + L
Sbjct: 138 YK-----EKPLGAQFYPADITKEE-------LNNADVEDKTGLYSVIKRDEQGKL----- 180
Query: 377 GHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAF 436
YSVPYS+EY + L +A++LL +A +A L+ +ADA
Sbjct: 181 -----------------YSVPYSKEYANELAKAADLLRQASKLADDKEFANYLNLRADAL 223
Query: 437 LSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFG 495
+++ SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D K + ++ F
Sbjct: 224 QKDDFQVSDFAWMDMKNNPVDVVIGPIETYEDQLFGYRAAYESYVLIKDLKWSERLAKFA 283
Query: 496 DNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDR 553
L L++ LP+D YK + + A + ++Y +G G +T+A NLPNDE++ ++
Sbjct: 284 AFLPELQKGLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEK 343
Query: 554 GTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
GT + LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G +
Sbjct: 344 GTRRLQLKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTIT 403
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
G TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRS
Sbjct: 404 GKG---TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTIEDYYTTFMAGIFRS 460
Query: 674 VRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGD 733
VRFG +HGK ++FN+ ++ AF + + + V+ +K+ A+ LS ILT+Q GD
Sbjct: 461 VRFGASSAHGKANMIRFNFFAQEGAFSKNEEGLYRVNMEKMSIAMAKLSRLILTLQGDGD 520
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
E L+ + + + L L+KL +PVD+
Sbjct: 521 YEKVDQLIATHGDIKEELAEDLEKLSKANIPVDV 554
>gi|441501424|ref|ZP_20983537.1| Nudix hydrolase 3 [Fulvivirga imtechensis AK7]
gi|441434821|gb|ELR68252.1| Nudix hydrolase 3 [Fulvivirga imtechensis AK7]
Length = 546
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 297/564 (52%), Gaps = 72/564 (12%)
Query: 208 RYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 267
+Y V L A+L LSD K+ + L+I+ +MDE+F WY RD L A
Sbjct: 38 KYTTVKLTADLTSLSDRQKQMIPLLIEVGKIMDELF----WYEAYGKRDSL---LGALTN 90
Query: 268 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPP 327
D K + +IN PW L N+ F+ KP
Sbjct: 91 DGAK-RFVMINYGPWDRLANNKPFIEGVGD---------------------------KPA 122
Query: 328 GANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV 387
GANFYP DM + EFE + E TS +T I+R
Sbjct: 123 GANFYPEDMTREEFE-------SAEVEGKTSLYTFIRR-------------------DDT 156
Query: 388 GSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA 447
GS L ++PY E + ++RA+ELL +A +A + LK+ L +A+A L++ YY+SD+A
Sbjct: 157 GS---LIAIPYHEMFKDQVSRAAELLREAARLAENAELKKYLELRAEALLTDEYYESDMA 213
Query: 448 WIELDS-ELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLP 506
W+++ + +LD+ GP ETYED ++GYKA E ++ ++D K + +++ + L L++ LP
Sbjct: 214 WMDMKTNQLDIITGPIETYEDQLYGYKAAHETYVLVKDMKWSERLEKYATLLPGLQRGLP 273
Query: 507 MDNAYKSKD-VIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
+ YK ++ + + +IY +GD G +T+A NLPNDE + +GT LKN
Sbjct: 274 VPEVYKREEPGTDSQLAAFDVIYYAGDCNSGSKTIAVNLPNDEEVQLKKGTRRSQLKNAM 333
Query: 565 EAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLE 624
AKF IL PIA I +EQ+ + FD+FF + + HE HG+G + ++ TVR
Sbjct: 334 RAKFDKILVPIAGELIAEEQRRHITFDAFFANTMFHEVAHGLGIKNTI---NKKGTVREA 390
Query: 625 LQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGK 684
L++ SA+EE KAD++GL+ + L + + L+ Y +F+A FRSVRFG +HGK
Sbjct: 391 LKDNASALEEGKADVLGLYMITRLHEQGEIQGELM-DYYTTFMASIFRSVRFGASSAHGK 449
Query: 685 GQALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
++FN+ E+ AF ++ T+++DF+K++ A+ +LS +IL +Q GD E S L+ +
Sbjct: 450 ANMIRFNFFKEQGAFARDAETGTYTIDFEKMQAAMNALSEKILILQGEGDYEGVSTLVAE 509
Query: 744 YCTMTQPLKVALQKLENVQVPVDI 767
+ L+ L +L + +PVDI
Sbjct: 510 KAMIQPELQNDLDRLADKGIPVDI 533
>gi|392533169|ref|ZP_10280306.1| hypothetical protein ParcA3_03988 [Pseudoalteromonas arctica A
37-1-2]
Length = 566
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 309/579 (53%), Gaps = 71/579 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD + + +I A+ +MDE+F+ Q + N +L +
Sbjct: 53 KQRLDIYTDFSLQSDLSHLSDNQRAMVAKLIDASKIMDELFWKQSFGENK--DAFLAKLN 110
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
D DK++ + IN PW L+ +EAFL++ YK
Sbjct: 111 D----DKVR-KFADINYGPWDRLNGDEAFLSS----------------------YK---- 139
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP D+ K E L ED T ++VIKR + L
Sbjct: 140 -EKPLGAQFYPADITKEE-------LNNADVEDKTGLYSVIKRDEQGKL----------- 180
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YSVPYS+EY + L +A++LL +A +A L+ +ADA +++
Sbjct: 181 -----------YSVPYSKEYANELAKAADLLRQASKLADDKEFANYLNLRADALQKDDFQ 229
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D K + ++ F L L
Sbjct: 230 VSDFAWMDMKNNPVDVVIGPIETYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPEL 289
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
++ LP+D YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 290 QKGLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 349
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PI+ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 350 LKNAMRAKFDKILVPISKQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 406
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTIEDYYTTFMAGIFRSVRFGAS 466
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + +S++ +K+ A+ LS ILT+Q GD E
Sbjct: 467 SAHGKANMIRFNFFAQEGAFSKNEAGLYSINMEKMSTAIADLSRLILTLQGDGDYEKVDQ 526
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
L+ + + + L L+KL +PVD+ TF ++L
Sbjct: 527 LIATHGDIKEELAKDLEKLSKANIPVDV--TFKQGKEIL 563
>gi|352086081|ref|ZP_08953660.1| hypothetical protein R2APBS1DRAFT_2802 [Rhodanobacter sp. 2APBS1]
gi|351679715|gb|EHA62849.1| hypothetical protein R2APBS1DRAFT_2802 [Rhodanobacter sp. 2APBS1]
Length = 576
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 307/573 (53%), Gaps = 71/573 (12%)
Query: 199 SLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWL 258
S +Q++L YA V L+A+L+ K+ + L+++AA M+ +++ Q W L L
Sbjct: 57 SAVVQQRLADYATVKLSADLSKFDARQKKMIALLVEAADSMNALYWKQAWGDKDAL---L 113
Query: 259 KEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYK 318
+ AD + + + IN PW LD ++ F V+G G+
Sbjct: 114 AKIADPATRE-----FAGINYGPWDRLDNDKPF-----------------VDGI-GV--- 147
Query: 319 ASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGH 378
+P GA FYP DM K EFE KS+L +K T+ +T+++R ++ G
Sbjct: 148 ------RPAGAQFYPADMSKAEFE--KSTLKDK-----TALYTLLRRDAQ--------GQ 186
Query: 379 IVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLS 438
++ SVPY E Y L +A+ LL A +A ++ L +ADA S
Sbjct: 187 LI--------------SVPYHEAYKPELAKAAGLLRHAAKLAKDAGFRKYLMLRADALQS 232
Query: 439 NNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDN 497
++Y SD AW+++ + +D+ IGP ETYED ++GYKA++E+++ I+D + ++ F
Sbjct: 233 DDYQASDFAWMDMKTNPVDLVIGPIETYEDQLYGYKASYESYVLIKDQAWSKKLARFAKY 292
Query: 498 LQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGT 555
L L++ LP+ + YK+ K A + +Y GD G +T+A NLPNDE++ +GT
Sbjct: 293 LPELQRELPVADKYKAEKPGSDADLNAYFAVYYGGDANVGAKTIAINLPNDEQVQLKKGT 352
Query: 556 SMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD 615
+ L+NV +AKF I+ PIA I +QQ+ + FD+FF + + HE HG+G D
Sbjct: 353 RRLQLENVMQAKFDQIMLPIAKELIADDQQKNLTFDAFFQNTMFHEVAHGLGIKETL--D 410
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVR 675
G+ TVR L++ S+ EE KADI+GL+ + L + L KS + YV+FLAG RSVR
Sbjct: 411 GK-GTVRKALKDQASSFEEGKADILGLYMVTKLADKGELDKSKLMDNYVTFLAGILRSVR 469
Query: 676 FGLEESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTIQARGDK 734
FG ++H K ++FN+ ++ AF + VDFDK+ A+ +LS ++LTIQ GD
Sbjct: 470 FGASDAHAKANMVRFNFFKQQGAFSRDEKTGRYRVDFDKMTAAMNALSAKLLTIQGDGDY 529
Query: 735 EAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+AA L + + L L++L+ +PVDI
Sbjct: 530 DAARQLTDRMGAVDAELAGDLKRLDQAHIPVDI 562
>gi|359432723|ref|ZP_09223084.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20652]
gi|357920664|dbj|GAA59333.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20652]
Length = 566
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 308/569 (54%), Gaps = 71/569 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRD-WLKEH 261
Q++L Y SL ++L+ LSD + + +I A+ +MD +F+ Q + N +D +L +
Sbjct: 53 QQRLDIYTDFSLKSDLSHLSDNQRAMVAKLIDASKIMDALFWKQSFGEN---KDAFLAKL 109
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D DK++ + IN PW L+ +EAFL+ G+K
Sbjct: 110 ND----DKVR-KFADINYGPWDRLNGDEAFLS-----------------GYK-------- 139
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP D+ K E L ED T ++VIKR + L
Sbjct: 140 --EKPLGAQFYPADITKEE-------LNNADVEDKTGLYSVIKRDEQGKL---------- 180
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
YSVPYS+EY + L++A++LL +A +A L+ +ADA +++
Sbjct: 181 ------------YSVPYSKEYANRLSKAADLLRQASKLADDKEFANYLNLRADALQKDDF 228
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D K + ++ F L
Sbjct: 229 QASDFAWMDMKNNPVDVVIGPIETYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPD 288
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L+++LP+D YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 289 LQKDLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRL 348
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 349 QLKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG-- 406
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 -TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTIEDYYTTFMAGIFRSVRFGA 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK ++FN+ ++ AF + + + V+ +K+ A+ LS ILT+Q GD E
Sbjct: 466 SSAHGKANMIRFNFFAQEGAFSKNEEGLYRVNMEKMSIAMAKLSRLILTLQGDGDYEKVD 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + + L L+KL +PVD+
Sbjct: 526 QLIATHGDIKEELAEDLEKLSKANIPVDV 554
>gi|410637608|ref|ZP_11348182.1| nudix hydrolase 3 [Glaciecola lipolytica E3]
gi|410142801|dbj|GAC15387.1| nudix hydrolase 3 [Glaciecola lipolytica E3]
Length = 561
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 309/569 (54%), Gaps = 71/569 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y V+L A+L SD K+ L L+I A+ +MD++F++Q + P + A
Sbjct: 49 KERLDIYFPVALTADLTAYSDNQKQMLSLLIDASKIMDDLFWMQA-FGQP-------KQA 100
Query: 263 DASELDKLKWMYYL-INKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
LD K + IN PW L+ ++ FLT D
Sbjct: 101 FLDSLDDPKVRKFADINYGPWDRLNGDKPFLTQTDE------------------------ 136
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP DM K E+ S++ +K + ++++ R + +G ++D
Sbjct: 137 ---KPLGAQFYPEDMSKEEY--LSSNIEQKD-----NLYSMVSRDT--------NGQLID 178
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+PYSE + L A+ELL KA D+A + + L +A+A L++NY
Sbjct: 179 --------------IPYSEYFADELEAAAELLRKAADLADNEAFANYLKMRAEAMLTDNY 224
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+++ D+ +++ IGP ETYED +FGY+A FEA++ ++D + ++ + L
Sbjct: 225 QASDFAWMQMKDNPIELVIGPIETYEDQLFGYRAAFEAYVLLKDLSWSERLAKYAAYLPE 284
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+ + YK++ + A + +IY +G G +T+A NLPNDE + GT +
Sbjct: 285 LQKGLPVADKYKAEMPGSNADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKNGTRRL 344
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN +AKF++IL PI++ I EQ++ + F +FF + + HE HG+G + DG+
Sbjct: 345 QLKNAMQAKFEHILMPISEQLIVPEQRQHITFTAFFANTMFHEVAHGLGIKNTL--DGK- 401
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+AG FRSVRFG
Sbjct: 402 GTVRGALKEHASALEEGKADILGLYMVEQLLNKGAITEGQLEDYYVTFMAGIFRSVRFGA 461
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK ++FN+ EK AF + +SV+ +K+ A+ +LS ILT+Q GD + +
Sbjct: 462 SSAHGKANMIRFNFFQEKGAFSRDENGLYSVNMEKMSEAISALSERILTLQGDGDYQGVA 521
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + L LQKL + +PVDI
Sbjct: 522 ELVADKGLIKSTLAEDLQKLTDANIPVDI 550
>gi|409197983|ref|ZP_11226646.1| Peptidase family M49 [Marinilabilia salmonicolor JCM 21150]
Length = 543
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 303/571 (53%), Gaps = 71/571 (12%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
+ +++ Y L +L+ LS KE L L+ KAA +MD++F+ Q W ++ L
Sbjct: 28 NVAEKVNAYESFPLTTDLSILSANQKEMLPLLFKAADIMDDLFWEQTWGG----KETLLS 83
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
+ D +L + Y IN PW L+ ++ F+ KG+
Sbjct: 84 NIDNPDLRR----YTEINYGPWDRLNNHKPFI--------------------KGIG---- 115
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
PKP G+ YP DM EF + D + +T+I+R
Sbjct: 116 ---PKPLGSKLYPKDMTMEEF-------NQLPNHDKANQYTIIERNG------------- 152
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
I L VPY +++N LT A++ L +A +A S + ++ L+++ADA LS +
Sbjct: 153 ---------IGKLMVVPYHKKWNKELTLAADYLRQAATLADSEAFQKYLNARADALLSGD 203
Query: 441 YYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQ 499
YY SD+ W+++ D+ +D +GP ETYED + G K FEA+I I+D +A+++ F L
Sbjct: 204 YYKSDMCWMDMKDNLVDFVVGPIETYEDRLLGTKTAFEAYILIKDTAWSARLERFAALLP 263
Query: 500 VLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVKGP-QTVAFNLPNDERIVKDRGTSM 557
+L++NLP D YK++ + + + V IY +GD +T+A NLPND + +G+
Sbjct: 264 LLQENLPADPEYKTETPGSESDLNVYDAIYYAGDCNAASKTIAINLPNDPDVQMKKGSRK 323
Query: 558 VMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGR 617
+ LKN +AKF+ IL PI+++ I Q++ +DFD+FF + + HE HG+G I
Sbjct: 324 LQLKNSMQAKFEKILVPISNIVIHPSQRKYIDFDAFFENTMFHEVAHGLG---IKETING 380
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG 677
+ TVR L+E SA+EE+KADI+GL+ + L L + + YV+F+AG FRSVRFG
Sbjct: 381 KGTVREALKETASAIEESKADILGLYIVTQLAETGELKDKDLMTNYVTFMAGIFRSVRFG 440
Query: 678 LEESHGKGQALQFNWLFEKEAFILHSD-DTFSVDFDKVEGAVESLSTEILTIQARGDKEA 736
+HGK ++FN+ E+ AF S+ +T+ +DF+K++ A+ LS EIL +Q GD
Sbjct: 441 AGSAHGKANMIRFNYFLEQGAFDKDSESETYRIDFEKMKQAMNRLSEEILVLQGNGDYNK 500
Query: 737 ASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
A +++ L+ L K+ N +PVDI
Sbjct: 501 ALTMIETMGQTGPELQKDLDKINNAGIPVDI 531
>gi|409201460|ref|ZP_11229663.1| hypothetical protein PflaJ_08967 [Pseudoalteromonas flavipulchra
JG1]
Length = 566
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 301/568 (52%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
Q +L Y V+L +L+ L+D K+ L L+I A+ +MD++F+ Q + + +L + +
Sbjct: 54 QDRLDIYTPVTLETDLSHLNDNQKKMLALLIDASVIMDDLFWQQAFGEDKAT--FLSKIS 111
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
D +K++ + IN PW L+ ++ FL+ G E KA
Sbjct: 112 D----EKVR-QFADINYGPWDRLNGDQVFLS--------------------GFEEKA--- 143
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
GA FYP D+ K E L + +D T ++VI+R L
Sbjct: 144 ----LGAEFYPSDITKDE-------LNNAEVKDKTGLYSVIRRDENGKL----------- 181
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YS YS Y + L +A+ELL +A +A L+ +ADA ++N+Y
Sbjct: 182 -----------YSTSYSSAYKAELDKAAELLRQASKLAQDKEFANYLNLRADALVNNSYQ 230
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+A FE+++ ++D + ++ F L L
Sbjct: 231 ASDFAWMDMKNNPIDVVIGPIETYEDQLFGYRAAFESYVLVKDLAWSERLAKFAAFLPEL 290
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+ LP+D+ YK + + A + +IY +G G +T+A NLPNDE + +GT +
Sbjct: 291 QTGLPVDDKYKQEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLQKGTRRLQ 350
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PIAD I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 351 LKNAMRAKFDKILVPIADQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 407
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y++F+AG FRSVRFG
Sbjct: 408 TVRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYITFMAGIFRSVRFGAS 467
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ E+ AF + D + V+ +K+ A+E LS ILT+Q GD +
Sbjct: 468 SAHGKANMIRFNFFKEEGAFSKNKDGLYQVNMEKMGAAMEKLSNLILTLQGDGDYQKVDQ 527
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L+ L KL +PVD+
Sbjct: 528 LIATHGDIKAELQKDLDKLSKANIPVDV 555
>gi|392541640|ref|ZP_10288777.1| hypothetical protein PpisJ2_07418 [Pseudoalteromonas piscicida JCM
20779]
Length = 566
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 301/568 (52%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
Q +L Y V+L +L+ L+D K+ L L+I A+ +MD++F+ Q + + +L + +
Sbjct: 54 QDRLDIYTPVTLETDLSHLNDNQKKMLALLIDASVIMDDLFWQQAFGEDKAT--FLSKIS 111
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
D +K++ + IN PW L+ ++ FL+ G E KA
Sbjct: 112 D----EKVR-QFADINYGPWDRLNGDQVFLS--------------------GFEEKA--- 143
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
GA FYP D+ K E L +D T ++VI+R L
Sbjct: 144 ----LGAEFYPSDITKDE-------LNNADVKDKTGLYSVIRRDENGKL----------- 181
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YS YS Y + L +A+ELL +A +A L+ +ADA ++N+Y
Sbjct: 182 -----------YSTSYSSAYKAELDKAAELLRQASKLAQDKEFANYLNLRADALVNNSYQ 230
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+A FE+++ ++D + ++ F L L
Sbjct: 231 ASDFAWMDMKNNPIDVVIGPIETYEDQLFGYRAAFESYVLVKDLAWSERLAKFAAFLPEL 290
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+ LP+D+ YK + + A + +IY +G G +T+A NLPNDE + +GT +
Sbjct: 291 QTGLPVDDKYKQEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLQKGTRRLQ 350
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PIAD I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 351 LKNAMRAKFDKILVPIADQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 407
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y++F+AG FRSVRFG
Sbjct: 408 TVRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYITFMAGIFRSVRFGAS 467
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ E+ AF ++D + V+ +K+ A+E LS ILT+Q GD +
Sbjct: 468 SAHGKANMIRFNFFKEEGAFSKNTDGLYQVNMEKMGAAMEKLSNLILTLQGDGDYQKVDQ 527
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L+ L KL +PVD+
Sbjct: 528 LIATHGDIKAELQKDLDKLSKANIPVDV 555
>gi|359437740|ref|ZP_09227794.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20311]
gi|359446243|ref|ZP_09235939.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20439]
gi|358027592|dbj|GAA64043.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20311]
gi|358039926|dbj|GAA72188.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20439]
Length = 566
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 303/569 (53%), Gaps = 71/569 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD K + +I A+ +MD++F+ Q + N +D+L
Sbjct: 53 RQRLDIYTDFSLQSDLSHLSDNQKAMVAKLIDASKIMDDLFWKQAFGKNK--QDFL---- 106
Query: 263 DASELDKLKWMYYL-INKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
++LD K + IN PW L+ +E FL+ G K
Sbjct: 107 --AQLDDEKVRQFADINYGPWDRLNGDEVFLS-----------------GNK-------- 139
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP D+ K E L +D T +++IKR
Sbjct: 140 --EKPLGAGFYPADITKEE-------LNNADVKDKTGLYSLIKRDE-------------- 176
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+ +LYS PYSEEY L +A+ELL +A +A L+ +ADA ++++
Sbjct: 177 --------LGNLYSTPYSEEYAVELAQAAELLREASKLADDKEFANYLNLRADAIQNDDF 228
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+++ ++ +DV IGP E YED +FGY+A +E+++ I+D K + ++ F L
Sbjct: 229 QASDFAWMDMKNNPIDVVIGPIENYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPE 288
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 289 LQKGLPVDSKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRL 348
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 349 QLKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTLTGKG-- 406
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 -TVRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYTTFMAGIFRSVRFGA 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK ++FN+ ++ AF D +S++ DK+ A+ LS ILT+Q GD E
Sbjct: 466 SSAHGKANMIRFNFFAQEGAFSKSEDGLYSINMDKMGDAMAKLSRLILTLQGDGDYEKVD 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L L+KL +PVD+
Sbjct: 526 QLIATHGDIKAELAKDLEKLSKANIPVDV 554
>gi|336451139|ref|ZP_08621584.1| Peptidase family M49 [Idiomarina sp. A28L]
gi|336281984|gb|EGN75230.1| Peptidase family M49 [Idiomarina sp. A28L]
Length = 554
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 311/574 (54%), Gaps = 69/574 (12%)
Query: 197 ERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRD 256
+ S + + +L Y V L+ +L+ LSD KE + L+I AA +MD +F+ Q + + +D
Sbjct: 36 QASASAEGRLDIYVPVRLDVDLSHLSDDQKELISLLIDAAEIMDNLFWQQAYAGD---KD 92
Query: 257 WLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLE 316
L + D + +N PW L+ + L +G+E
Sbjct: 93 MLLNNI----ADPRVREFVNVNYGPWDRLNNMQPIL--------------------QGIE 128
Query: 317 YKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLS 376
KP GAN+YP DM + EF+ + L K +T+++R
Sbjct: 129 -------AKPLGANYYPADMTREEFD--AADLPGKD-----DLYTLVRR----------- 163
Query: 377 GHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAF 436
+ G +LY++PYSE Y L++A+ +L A +A ++ R L +A+AF
Sbjct: 164 --------NEAG---ELYTIPYSEAYREELSQAAAILRAAATVADDETMARYLEMRANAF 212
Query: 437 LSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFG 495
LSN Y SD W+++ +S++DV IGP ETYED +FGYKA FEA++ ++D + + +++++
Sbjct: 213 LSNEYQASDYVWMDITESDVDVIIGPIETYEDRLFGYKAGFEAYVLVKDTEWSQRLEVYA 272
Query: 496 DNLQVLEQNLPMDNAYKSKDV-IAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDR 553
+L L++ LP+ + YK+++ A + ++Y +G G +T+A NLPNDE + +
Sbjct: 273 QHLPSLQRGLPVADEYKAEEPGTDAQLNAYDIVYYAGHSNAGSKTIAVNLPNDEEVQLAK 332
Query: 554 GTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
GT LKN +AKF IL PIAD+ I EQ++ + FD+FF + + HE HG+G ++
Sbjct: 333 GTRRSQLKNAMQAKFDKILVPIADLLIVPEQRQHITFDAFFANTMFHEVAHGLGIKNLVN 392
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
+G TVR L+E S +EE KADI+GL+ + L+ +L + ++ YV+FLAG FRS
Sbjct: 393 GEG---TVRGALREYASPIEEGKADILGLYMVTQLLEEGVLTEGQLEDYYVTFLAGIFRS 449
Query: 674 VRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGD 733
VRFG +HG+ ++FN+ E AF+ + +SVD + + A+ SLS IL +Q GD
Sbjct: 450 VRFGASSAHGQANMIRFNYFAEHGAFVRNEQGEYSVDMENMRSAMNSLSDLILRLQGDGD 509
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+ L + ++ L+ L ++++ +PVDI
Sbjct: 510 YAGVAQLFSEMGSVNAGLQGDLDRIDSANIPVDI 543
>gi|333894429|ref|YP_004468304.1| hypothetical protein ambt_14960 [Alteromonas sp. SN2]
gi|332994447|gb|AEF04502.1| hypothetical protein ambt_14960 [Alteromonas sp. SN2]
Length = 568
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 309/571 (54%), Gaps = 69/571 (12%)
Query: 200 LTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLK 259
L + +L Y V L ++L+ LSD ++ + L+I A+ +MD++F+ Q ++ +
Sbjct: 52 LVNESRLSIYHPVELTSDLSHLSDNQQKMIGLLIDASKIMDDLFWKQAFFGDK------N 105
Query: 260 EHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKA 319
++ E D +K + IN PW L+ + AFL+ G E KA
Sbjct: 106 AFLNSIENDDVKH-FASINYGPWDRLNGDNAFLS--------------------GYEEKA 144
Query: 320 SFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHI 379
GA FYP +M K F ++ +KQ ++++K+ NL
Sbjct: 145 L-------GAEFYPHNMTKAGFA--TATFDDKQ-----GLYSLVKQDEAGNL-------- 182
Query: 380 VDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN 439
YSVPYSE Y S LT AS +L +A ++A PS K L +A A L++
Sbjct: 183 --------------YSVPYSEAYKSELTAASNILKEAAELAEDPSFKAYLTLRAQALLTD 228
Query: 440 NYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
+Y SD+AW+++ + +++ IGP E+YED +FGY+A FEA++ ++D + ++ + L
Sbjct: 229 DYLASDMAWMDMKTNPVELVIGPIESYEDQLFGYRAAFEAYVLVKDLAWSEKLAKYAAFL 288
Query: 499 QVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTS 556
L++ LP+ YK++ + A + ++Y +G G +T+A NLPNDER+ ++GT
Sbjct: 289 PELQKGLPVPAQYKAEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDERVQLEKGTR 348
Query: 557 MVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDG 616
+ LKN AKF NIL PIAD+ I EQ++ + FD+FF + + HE HG+G + DG
Sbjct: 349 RLQLKNAMRAKFDNILIPIADMLIAPEQRDHITFDAFFANTMFHEVAHGLGIKNTL--DG 406
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRF 676
TVR L+E SA+EE KADI+GL+ ++ L+ + + + ++ YV+F+AG FRSVRF
Sbjct: 407 -SDTVRGSLKEHASALEEGKADILGLYMIQSLLEKGEISEGTLEDYYVTFMAGIFRSVRF 465
Query: 677 GLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEA 736
G +HGK ++FN+ ++ AF + + V+ +K+ AV +LS ILT+Q GD +
Sbjct: 466 GASSAHGKANMIRFNFFAQEGAFEQTEEGVYRVNVEKMGAAVAALSELILTLQGDGDYDG 525
Query: 737 ASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+ L+ + L L +LE +PVDI
Sbjct: 526 VAELVANMGVIKPQLAADLARLEAANIPVDI 556
>gi|389796876|ref|ZP_10199924.1| hypothetical protein UUC_04159 [Rhodanobacter sp. 116-2]
gi|388448071|gb|EIM04059.1| hypothetical protein UUC_04159 [Rhodanobacter sp. 116-2]
Length = 576
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 307/573 (53%), Gaps = 71/573 (12%)
Query: 199 SLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWL 258
S +Q+ L YA V L+A+L+ K+ + L+++AA M+ +++ Q W L L
Sbjct: 57 SAAVQQHLADYATVKLDADLSKFDARQKKMIALLVEAADSMNALYWKQAWGDKDAL---L 113
Query: 259 KEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYK 318
+ AD + + + IN PW LD ++ F V+G G+
Sbjct: 114 AKIADPATRE-----FAGINYGPWDRLDNDKPF-----------------VDGI-GV--- 147
Query: 319 ASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGH 378
+P GA FYP DM K EFE KS+L +K T+ +T+++R ++ G
Sbjct: 148 ------RPAGAQFYPADMSKAEFE--KSTLKDK-----TALYTLLRRDAQ--------GQ 186
Query: 379 IVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLS 438
++ SVPY E Y L +A+ LL +A +A ++ L +ADA S
Sbjct: 187 LI--------------SVPYHEAYKPELAKAAGLLRQAAKLAKDAGFRKYLMLRADALQS 232
Query: 439 NNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDN 497
++Y SD AW+++ + +D+ IGP ETY D ++GYKA++E+++ I+D + ++ F
Sbjct: 233 DDYQVSDFAWMDMKTNPVDLVIGPIETYADQLYGYKASYESYVLIKDQAWSKKLARFAQY 292
Query: 498 LQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGT 555
L L++ LP+ + YK++ A A + +Y GD G +T+A NLPNDE++ +GT
Sbjct: 293 LPELQRGLPVPDRYKAEKPGADADLNAYFAVYYGGDANVGAKTIAINLPNDEQVQLKKGT 352
Query: 556 SMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD 615
+ L+NV +AKF I+ PIA I +QQ+ + FD+FF + + HE HG+G D
Sbjct: 353 RRLQLENVMQAKFDQIMLPIAKELIADDQQKNLTFDAFFQNTMFHEVAHGLGIKETL--D 410
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVR 675
G+ TVR L++ S+ EE KADI+GL+ + L + L KS + YV+FLAG RSVR
Sbjct: 411 GK-GTVRKALKDQASSFEEGKADILGLYMVTKLADKGELDKSKLMDNYVTFLAGILRSVR 469
Query: 676 FGLEESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTIQARGDK 734
FG ++H K ++FN+ ++ AF + VDFDK+ A+ +LS ++LTIQ GD
Sbjct: 470 FGASDAHAKANMVRFNFFKQQGAFSRDEKTGRYRVDFDKMTAAMNALSAKLLTIQGDGDY 529
Query: 735 EAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
+AA L + + L L++L+ +PVDI
Sbjct: 530 DAARQLTDRMGAVDAELAGDLKRLDQAHIPVDI 562
>gi|332534892|ref|ZP_08410714.1| hypothetical protein PH505_bv00250 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035691|gb|EGI72180.1| hypothetical protein PH505_bv00250 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 566
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 314/596 (52%), Gaps = 72/596 (12%)
Query: 187 ISQRYKENTMERSLTLQKQ-LRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYL 245
++Q+ + + + + KQ L Y SL ++L+ LSD + + +I A+ +MDE+F+
Sbjct: 36 LAQKSSAQSGPKLINVDKQRLDIYTDFSLQSDLSHLSDNQRAMVAKLIDASKIMDELFWK 95
Query: 246 QVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDA 305
Q + N +D + ++ K + IN PW L+ +EAFL++
Sbjct: 96 QAFGEN---KDAFLAKLNDEKVRK----FADINYGPWDRLNGDEAFLSS----------- 137
Query: 306 TKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKR 365
YK KP GA FYP D+ K E L ED T ++VIKR
Sbjct: 138 -----------YK-----EKPLGAQFYPADITKEE-------LNNADVEDKTGLYSVIKR 174
Query: 366 RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSL 425
+ L YSVPYS+EY L +A+++L +A +A
Sbjct: 175 DEQGKL----------------------YSVPYSKEYADELAKAADILREASKLADDKEF 212
Query: 426 KRLLHSKADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRD 484
L+ +ADA +++ SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D
Sbjct: 213 ANYLNLRADALQKDDFQVSDFAWMDMKNNPVDVVIGPIETYEDQLFGYRAAYESYVLIKD 272
Query: 485 DKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFN 542
K + ++ F L L++ LP+D YK + + A + ++Y +G G +T+A N
Sbjct: 273 LKWSERLAKFAAFLPELQKGLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAIN 332
Query: 543 LPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHEC 602
LPNDE++ ++GT + LKN AKF IL PI++ I EQ++ + FD+FF + + HE
Sbjct: 333 LPNDEQVQLEKGTRRLQLKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEV 392
Query: 603 CHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSM 662
HG+G + G TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++
Sbjct: 393 AHGLGIKNTITGKG---TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTIEDY 449
Query: 663 YVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLS 722
Y +F+AG FRSVRFG +HGK ++FN+ ++ AF + + + V+ +K+ A+ LS
Sbjct: 450 YTTFMAGIFRSVRFGASSAHGKANMIRFNFFAQEGAFSKNEEGLYRVNMEKMSIAMAKLS 509
Query: 723 TEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
ILT+Q GD E L+ + + + L L+KL +PVD+ TF ++L
Sbjct: 510 RLILTLQGDGDYEKVDQLIATHGDIKEELAKDLEKLSKANIPVDV--TFKQGKEIL 563
>gi|389794531|ref|ZP_10197683.1| hypothetical protein UU9_09952 [Rhodanobacter fulvus Jip2]
gi|388432337|gb|EIL89351.1| hypothetical protein UU9_09952 [Rhodanobacter fulvus Jip2]
Length = 574
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 302/571 (52%), Gaps = 71/571 (12%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
++ ++L YA V L A+L+ + K+ + L+++AA M+ I++ Q W L + +
Sbjct: 57 SVAQRLASYAPVKLEADLSAFNKRQKKMIALLVEAADSMNAIYWRQSWGDKDALLSRITD 116
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
A + +N PW L+ ++ F+ D V+
Sbjct: 117 PATRE--------FAELNYGPWDRLNNDKPFV---DGVVE-------------------- 145
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
+PPGA FYP DM + +F+ +S L +K TS +T+++R ++ G ++
Sbjct: 146 ----RPPGAQFYPADMTREQFD--QSPLKDK-----TSLYTLLRRDAQ--------GQLI 186
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
+VPY E Y + L +A+ LL A +A ++ L +ADA LS+N
Sbjct: 187 --------------TVPYHEAYKAELEKAAGLLRDAAKLAQDAGFRKYLTLRADALLSDN 232
Query: 441 YYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQ 499
Y SD+AW+++ +D+ IGP ETYED ++GYKA++E+++ I+D +A++ F L
Sbjct: 233 YQPSDLAWMDMKKNPVDIVIGPIETYEDQLYGYKASYESYVLIKDQAWSAKLARFAKYLP 292
Query: 500 VLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSM 557
L++ LP+ + YK+ K A + +Y GD G +T+A NLPNDE++ +GT
Sbjct: 293 ELQRGLPVPDRYKAEKPGSDADLNAYFAVYYGGDANAGAKTIAINLPNDEQVQLKKGTRR 352
Query: 558 VMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGR 617
+ L+NV +AKF I+ PI + I +QQ+ + FD+FF + + HE HG+G DG+
Sbjct: 353 LQLENVMKAKFDTIMLPIGKLLIADDQQQNLTFDAFFQNTMFHEVAHGLGIKQTL--DGK 410
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG 677
TVR L++ S+ EE KAD++GL+ + L + L K+ + YV+FLAG RSVRFG
Sbjct: 411 -GTVRKALKDQASSFEEGKADVLGLYMVVKLADKGELDKTRLMDNYVTFLAGILRSVRFG 469
Query: 678 LEESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEA 736
++H + ++FN+ + AF + VDFDK+ A+ SLST++LTIQ GD +A
Sbjct: 470 ASDAHARANMVRFNYFKQAGAFTRDERTGRYRVDFDKMTAAMSSLSTKLLTIQGDGDYDA 529
Query: 737 ASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
A L + L L +L +PVDI
Sbjct: 530 AKQLTDQLGAADAKLAGDLNRLAEANIPVDI 560
>gi|119472118|ref|ZP_01614349.1| putative orphan protein [Alteromonadales bacterium TW-7]
gi|119445138|gb|EAW26431.1| putative orphan protein [Alteromonadales bacterium TW-7]
Length = 562
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 302/568 (53%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD K + ++I A+ +MD +F+ Q + + KE
Sbjct: 49 EQRLNIYTDFSLQSDLSHLSDNQKAMIAILIDASKIMDALFWKQAFGED-------KETF 101
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A D+ + IN PW L+ +E FL+ G+K
Sbjct: 102 LAKLTDQQIRKFADINYGPWDRLNGDETFLS-----------------GYK--------- 135
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP D+ K E L ED +++IKR + L
Sbjct: 136 -EKPLGAQFYPADITKEE-------LNNADVEDKAGLYSIIKRDEQGKL----------- 176
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YSVPYS+EY + L +A++LL +A +A + L+ +ADA +++
Sbjct: 177 -----------YSVPYSKEYATELAKAADLLRQASKLADNKEFANYLNLRADALQKDDFQ 225
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+ +E+++ I+D K + ++ F L L
Sbjct: 226 VSDFAWMDMKNNPIDVVIGPIETYEDQLFGYRTAYESYVLIKDLKWSERLAKFAAFLPEL 285
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 286 QKGLPVDDKYKHEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 345
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 346 LKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 402
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y++F+AG FRSVRFG
Sbjct: 403 TVRQSLQEHASALEEGKADILGLYMVEQLLNKGEISEGTIEDYYITFMAGIFRSVRFGAS 462
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + + + V+ +K+ A+ LS ILT+Q GD +
Sbjct: 463 SAHGKANMIRFNFFAQEGAFSKNEEGFYRVNMEKMSIAMAKLSRLILTLQGDGDYQKVDQ 522
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + + L L+KL +PVD+
Sbjct: 523 LIATHGDIKESLTKDLEKLSQANIPVDV 550
>gi|359455010|ref|ZP_09244263.1| hypothetical protein P20495_3027 [Pseudoalteromonas sp. BSi20495]
gi|358047976|dbj|GAA80512.1| hypothetical protein P20495_3027 [Pseudoalteromonas sp. BSi20495]
Length = 566
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 306/579 (52%), Gaps = 71/579 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD + + +I A+ VMDE+F+ Q + N K+
Sbjct: 53 KQRLDIYTDFSLQSDLSHLSDNQRAMVAKLIDASKVMDELFWKQAFGDN-------KDAF 105
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A D+ + IN PW L+ ++AFL++ YK
Sbjct: 106 LAKLSDEKVRQFADINYGPWDRLNGDKAFLSS----------------------YK---- 139
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP D+ K E L +D T ++VIKR + L
Sbjct: 140 -EKPLGAQFYPADITKEE-------LNNADVKDKTGLYSVIKRDEQGKL----------- 180
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YSVPYS+EY + L +A++LL +A +A L+ +ADA +++
Sbjct: 181 -----------YSVPYSKEYAAELAKAADLLREASKLADDKEFASYLNLRADALQKDDFQ 229
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D K + ++ F L L
Sbjct: 230 VSDFAWMDMKNNPIDVVIGPIETYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPEL 289
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+++LP+D YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 290 QKDLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 349
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 350 LKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 406
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTIEDYYTTFMAGIFRSVRFGAS 466
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + + V+ +K+ A+ LS ILT+Q GD E
Sbjct: 467 SAHGKANMIRFNFFAQEGAFSKNEAGLYRVNMEKMSIAMAKLSRLILTLQGDGDYEKVDQ 526
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
L+ + + + L L KL +PVD+ TF K+L
Sbjct: 527 LIATHGDIKEELAKDLDKLSKANIPVDV--TFKQGKKVL 563
>gi|414070778|ref|ZP_11406758.1| Nudix hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806795|gb|EKS12781.1| Nudix hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 566
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 302/568 (53%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD + + +I A+ VMDE+F+ Q + N K+
Sbjct: 53 KQRLDIYTDFSLQSDLSHLSDNQRAMVAKLIDASKVMDELFWKQAFGDN-------KDAF 105
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A D+ + IN PW L+ ++AFL++ YK
Sbjct: 106 LAKLSDEKVRQFADINYGPWDRLNGDKAFLSS----------------------YK---- 139
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP D+ K E L +D T ++VIKR + L
Sbjct: 140 -EKPLGAQFYPADITKEE-------LNNADVKDKTGLYSVIKRDEQGKL----------- 180
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YSVPYS+EY + L +A++LL +A +A L+ +ADA +++
Sbjct: 181 -----------YSVPYSKEYAAELAKAADLLREASKLADDKEFASYLNLRADALQKDDFQ 229
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D K + ++ F L L
Sbjct: 230 VSDFAWMDMKNNPIDVVIGPIETYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPEL 289
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+++LP+D YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 290 QKDLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 349
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 350 LKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 406
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTIEDYYTTFMAGIFRSVRFGAS 466
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + + V+ +K+ A+ LS ILT+Q GD E
Sbjct: 467 SAHGKANMIRFNFFAQEGAFSKNEAGLYRVNMEKMSIAMAKLSRLILTLQGDGDYEKVDQ 526
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + + L L+KL +PVD+
Sbjct: 527 LIATHGDIKEELAKDLEKLSKANIPVDV 554
>gi|359447918|ref|ZP_09237477.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20480]
gi|358046278|dbj|GAA73726.1| nudix hydrolase 3 [Pseudoalteromonas sp. BSi20480]
Length = 562
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 302/568 (53%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD K + ++I A+ +MD +F+ Q + + KE
Sbjct: 49 EQRLNIYTDFSLQSDLSHLSDNQKAMIAILIDASKIMDALFWKQAFGED-------KETF 101
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A D+ + IN PW L+ +E FL+ G+K
Sbjct: 102 LAKLTDQQIRKFADINYGPWDRLNGDETFLS-----------------GYK--------- 135
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
K GA FYP D+ K E L ED T +++IKR + L
Sbjct: 136 -EKSLGAQFYPADITKEE-------LNNADVEDKTGLYSIIKRDEQGKL----------- 176
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YSVPYS+EY + L +A++LL +A +A + L+ +ADA +++
Sbjct: 177 -----------YSVPYSKEYATELAKAADLLRQASKLADNKEFANYLNLRADALQKDDFQ 225
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+ +E+++ I+D K + ++ F L L
Sbjct: 226 VSDFAWMDMKNNPIDVVIGPIETYEDQLFGYRTAYESYVLIKDLKWSERLAKFAAFLPEL 285
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 286 QKGLPVDDKYKHEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 345
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 346 LKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 402
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y++F+AG FRSVRFG
Sbjct: 403 TVRQSLQEHASALEEGKADILGLYMVEQLLNKGEISEGTIEDYYITFMAGIFRSVRFGAS 462
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + + + V+ +K+ A+ LS ILT+Q GD +
Sbjct: 463 SAHGKANMIRFNFFAQEGAFSKNEEGFYRVNMEKMSIAMAKLSRLILTLQGDGDYQKVDQ 522
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + + L L+KL +PVD+
Sbjct: 523 LIATHGDIKESLTKDLEKLSQANIPVDV 550
>gi|315125790|ref|YP_004067793.1| hypothetical protein PSM_A0692 [Pseudoalteromonas sp. SM9913]
gi|315014304|gb|ADT67642.1| hypothetical protein PSM_A0692 [Pseudoalteromonas sp. SM9913]
Length = 566
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 302/569 (53%), Gaps = 71/569 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LS+ K + +I A+ +MD++F+ Q + + + +
Sbjct: 53 RQRLDIYTDFSLQSDLSHLSENQKAMVAKLIDASKIMDDLFWKQAFGED--------KQS 104
Query: 263 DASELDKLKWMYYL-INKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
++LD K + IN PW L+ +E FL+ G+K
Sbjct: 105 FLAQLDDEKVRQFADINYGPWDRLNGDEVFLS-----------------GYK-------- 139
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KP GA FYP D+ K E L +D T +++IKR
Sbjct: 140 --EKPLGAGFYPADITKEE-------LNNADVKDKTGLYSLIKRDE-------------- 176
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
+ +LYS PYSEEY L +A++LL A +A L+ +ADA S+++
Sbjct: 177 --------LGNLYSTPYSEEYAVELAQAAKLLRDASKLADDKEFANYLNLRADAIQSDDF 228
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+++ ++ +DV IGP E YED +FGY+A +E+++ I+D K + ++ F L
Sbjct: 229 QASDFAWMDMKNNPIDVVIGPIENYEDQLFGYRAAYESYVLIKDLKWSERLAKFAAFLPE 288
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 289 LQKGLPVDSKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRL 348
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN AKF IL PIA+ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 349 QLKNAMRAKFDKILVPIAEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG-- 406
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 407 -TVRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYTTFMAGIFRSVRFGA 465
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK ++FN+ ++ AF + D +S++ DK+ A+ LS ILT+Q GD E
Sbjct: 466 SSAHGKANMIRFNFFAQEGAFSKNEDGLYSINMDKMGDAMAKLSRLILTLQGDGDYEKVD 525
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L L+KL +PVD+
Sbjct: 526 QLIATHGDIKAELAKDLEKLSKANIPVDV 554
>gi|392539661|ref|ZP_10286798.1| hypothetical protein Pmarm_16207 [Pseudoalteromonas marina mano4]
Length = 562
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 302/568 (53%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+++L Y SL ++L+ LSD K + ++I A+ +MD +F+ Q + + KE
Sbjct: 49 EQRLNIYTDFSLQSDLSHLSDNQKAMIAILIDASKIMDALFWKQAFGED-------KETF 101
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A D+ + IN PW L+ +E FL+ G+K
Sbjct: 102 LAKLTDQQIRKFADINYGPWDRLNGDETFLS-----------------GYK--------- 135
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
K GA FYP D+ K E L ED T +++IKR + L
Sbjct: 136 -EKSLGAQFYPADITKEE-------LNNADVEDKTGLYSIIKRDEQGKL----------- 176
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YSVPYS+EY + L +A++LL +A +A + L+ +ADA +++
Sbjct: 177 -----------YSVPYSKEYATELAQAADLLRQASKLADNKEFANYLNLRADALQKDDFQ 225
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +DV IGP ETYED +FGY+ +E+++ I+D K + ++ F L L
Sbjct: 226 VSDFAWMDMKNNPIDVVIGPIETYEDQLFGYRTAYESYVLIKDLKWSERLAKFAAFLPEL 285
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT +
Sbjct: 286 QKGLPVDDKYKHEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 345
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 346 LKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTITGKG--- 402
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y++F+AG FRSVRFG
Sbjct: 403 TVRQSLQEHASALEEGKADILGLYMVEQLLNKGEISEGTIEDYYITFMAGIFRSVRFGAS 462
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + + + V+ +K+ A+ LS ILT+Q GD +
Sbjct: 463 SAHGKANMIRFNFFAQEGAFSKNEEGFYRVNMEKMSIAMAKLSRLILTLQGDGDYQKVDQ 522
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + + L L+KL +PVD+
Sbjct: 523 LIATHGDIKESLTKDLEKLSQANIPVDV 550
>gi|410665693|ref|YP_006918064.1| hypothetical protein M5M_16010 [Simiduia agarivorans SA1 = DSM
21679]
gi|409028050|gb|AFV00335.1| hypothetical protein M5M_16010 [Simiduia agarivorans SA1 = DSM
21679]
Length = 560
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 294/568 (51%), Gaps = 68/568 (11%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 268
YA V+L A+L+ LSD+ + + L+I A+ +MD++F+ Q + L D + + A
Sbjct: 46 YADVTLQADLSHLSDSQRTMVALLIDASEIMDDLFWRQAYGDKASLLDRIPDPATRR--- 102
Query: 269 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 328
+ IN PW L + F+ D+ KP G
Sbjct: 103 -----FAEINYGPWDRLAGDAPFIQGVDA---------------------------KPLG 130
Query: 329 ANFYPPDMDKMEFELWKSSLTEKQQEDAT---SFFTVIKRRSEFNLDSSLSGHIVDATNH 385
A FYP DM K E+E W+S + Q D T +++I+R +
Sbjct: 131 AAFYPADMTKAEYEAWRSE--NQTQMDTTRDLELYSLIRR-------------------N 169
Query: 386 SVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD 445
+ G +L VPYS+ + L +A+ LL +A A S K+ L +A A +++Y SD
Sbjct: 170 AAG---ELQFVPYSKAFAPELQKAAFLLREAAKYAEDASFKQYLIMRASALETDDYQPSD 226
Query: 446 IAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
+AW+++ + +++ IG ETYED +FGY+A +E+++ I+D + ++ + L L+
Sbjct: 227 MAWMDMKTNPVELVIGAIETYEDMLFGYRAAYESYVLIKDQAWSERLAKYAAFLPELQAG 286
Query: 505 LPMDNAYKSKDV-IAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKN 562
LP+D AYK++ A + ++Y +G G +T+A NLPNDE++ ++GT + LKN
Sbjct: 287 LPVDAAYKTETPGTDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQLKN 346
Query: 563 VSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVR 622
AKF IL PIA+ I +QQ+ + FD+FF + + HE HG+G + G VR
Sbjct: 347 AMRAKFDKILVPIAEQLIVADQQQHITFDAFFGNTMFHEVAHGLGIKNTINGKG---LVR 403
Query: 623 LELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESH 682
L+E S+MEE KAD++GL+ + L R+ + + YV+FLAG FRSVRFG +H
Sbjct: 404 TALKEHASSMEEGKADVLGLYMISELYKRNQIDDGELMDNYVTFLAGIFRSVRFGASSAH 463
Query: 683 GKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
GK ++FN+ + AF +D + VDFDK+ AV LS +LT+Q GD + L+
Sbjct: 464 GKANMVRFNFFKDAGAFSTDADGRYRVDFDKMTQAVNDLSNLLLTLQGNGDYDGVHALVA 523
Query: 743 KYCTMTQPLKVALQKLENVQVPVDIAPT 770
+ M L L KL +PVDI T
Sbjct: 524 EKGEMGADLMAELDKLTQANIPVDIVFT 551
>gi|77361299|ref|YP_340874.1| hypothetical protein PSHAa2383 [Pseudoalteromonas haloplanktis
TAC125]
gi|76876210|emb|CAI87432.1| putative orphan protein [Pseudoalteromonas haloplanktis TAC125]
Length = 564
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 305/570 (53%), Gaps = 69/570 (12%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
T +++L Y SL +L+ LSD K + +I A+ +MD++F+ Q + N +L +
Sbjct: 49 TDKQRLDIYTDFSLQTDLSHLSDNQKAMVAKLIDASIIMDDLFWQQAFGENK--ESFLAK 106
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
AD DK++ + IN PW L+ ++ FL++ YK
Sbjct: 107 LAD----DKVR-KFADINYGPWDRLNGDKVFLSS----------------------YK-- 137
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
K GA FYP D+ K E L K+ L +K +++IKR + NL
Sbjct: 138 ---EKATGAQFYPADITKEE--LNKADLADK-----NGLYSIIKRDEQGNL--------- 178
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
YSVPYS+EY + L A+ LL +A +A L+ +ADA L+++
Sbjct: 179 -------------YSVPYSKEYATELLEAANLLREASKLADDKEFANYLNLRADALLNDD 225
Query: 441 YYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQ 499
+ SD AW+++ ++ +DV IGP ETYED +FGY+A +E+++ I+D + ++ F L
Sbjct: 226 FQASDFAWMDMKNNPVDVVIGPIETYEDQLFGYRAAYESYVLIKDLAWSERLAKFAAFLP 285
Query: 500 VLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSM 557
L++ LP+D+ YK + + A + ++Y +G G +T+A NLPNDE++ ++GT
Sbjct: 286 ELQKGLPVDDKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTRR 345
Query: 558 VMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGR 617
+ LKN AKF IL PIA+ I EQ++ + FD+FF + + HE HG+G + G
Sbjct: 346 LQLKNAMRAKFDKILVPIAEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTLTGKG- 404
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG 677
TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FRSVRFG
Sbjct: 405 --TVRQSLQEHASALEEGKADILGLYMIEQLLKKGEITEGTLEDYYTTFMAGIFRSVRFG 462
Query: 678 LEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
+HGK ++FN+ ++ AF + + V+ +K+ A+ LS ILTIQ GD +
Sbjct: 463 ASSAHGKANMIRFNFFAQEGAFSKNEAGLYRVNMEKMSHAMAKLSRLILTIQGDGDYQKV 522
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L L+KL +PVD+
Sbjct: 523 DQLIATHGNIKAELAEDLEKLSQANIPVDV 552
>gi|224073104|ref|XP_002303973.1| predicted protein [Populus trichocarpa]
gi|222841405|gb|EEE78952.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 165/206 (80%), Gaps = 19/206 (9%)
Query: 10 HLDVLTMTGQKTGITKPRS-------------------EVHRVGDYHRTVNAWIFAESTQ 50
LDVL TGQKTGI+KPR EVHR GDYHR V+ WI++ESTQ
Sbjct: 18 RLDVLNKTGQKTGISKPRQSPISLLPLSISSSIILLLREVHRDGDYHRAVHVWIYSESTQ 77
Query: 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL 110
ELLLQRRAD KDSWPG WDISSAGHISAGDSSL+SAQRELQEELGI+LPKDAFE +F +L
Sbjct: 78 ELLLQRRADCKDSWPGQWDISSAGHISAGDSSLVSAQRELQEELGISLPKDAFELIFIYL 137
Query: 111 QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
Q+ VINDGKFINNEF DVYLVTT++PIPLEAFTLQ+TEVSAVKYI++EEY++LL K+DP
Sbjct: 138 QECVINDGKFINNEFNDVYLVTTVDPIPLEAFTLQETEVSAVKYISFEEYRSLLVKEDPD 197
Query: 171 FVPYDVNGGYGQLFNIISQRYKENTM 196
+VPYDV+ YGQLF II +RY + +
Sbjct: 198 YVPYDVDEQYGQLFEIIMKRYAKQYL 223
>gi|149278249|ref|ZP_01884387.1| putative orphan protein [Pedobacter sp. BAL39]
gi|149231015|gb|EDM36396.1| putative orphan protein [Pedobacter sp. BAL39]
Length = 575
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 290/562 (51%), Gaps = 71/562 (12%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 268
Y V L L L+ ++E L L+I+AA +MDE+F+ Q + L +K+ S
Sbjct: 70 YEKVKLTTNLNELTPKEREILPLLIQAAQIMDELFWKQAYPKRDSLLSTIKDEKTRS--- 126
Query: 269 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 328
+ IN PW L+ ++ F+ + KP
Sbjct: 127 -----FLTINYGPWDRLNGDKPFIAGIGA---------------------------KPDA 154
Query: 329 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 388
A+FYPP M K E E KS + +D ++VI+R S +G +V
Sbjct: 155 ASFYPPGMTKEELE--KSDV-----KDKMGLYSVIQRDS--------TGKLV-------- 191
Query: 389 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 448
SVPY Y S L +AS LL +A +A K L+ +ADA +S+NY SD AW
Sbjct: 192 ------SVPYHILYASELQKASNLLKQAALLAEDAGFKNYLNLRADALVSDNYTASDYAW 245
Query: 449 IELDS-ELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 507
+++ + LD+ IGP E YED +F +A++EA++ ++D + ++ + L L++ LP+
Sbjct: 246 MDMKTNNLDIIIGPIENYEDKLFNARASYEAYVLVKDKVWSKRLAKYVSMLPQLQEGLPV 305
Query: 508 DNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
D YK K + + +IY +GD G +T+A NLPNDE I + +GT LKN +
Sbjct: 306 DAKYKKEKPGTDSELNAYDVIYYAGDCNAGSKTIAVNLPNDEIIQQKKGTRRSQLKNAMK 365
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKF IL PIA+ I K+Q + V+FDSFF++ + HE HG+G G V+ L
Sbjct: 366 AKFDKILIPIANELIDKDQLQYVNFDSFFSNVMFHEVAHGLGIKQTVTGKG---FVKEAL 422
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
QE +S +EE KAD++GL+ + L+ + L L KS Y +++AG RSVRFG +HGK
Sbjct: 423 QEQYSWLEEGKADVLGLYMVTGLLKKGELEGDL-KSFYTTYMAGILRSVRFGAASAHGKA 481
Query: 686 QALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
FN+ E+ AF+ +++ T+ VDF K E A+ LS I+T+Q GDK A ++
Sbjct: 482 NMQCFNFFKEQGAFVRNANGTYKVDFAKFETAMNGLSKLIITLQGNGDKAAVEKTQKEKA 541
Query: 746 TMTQPLKVALQKLENVQVPVDI 767
++ L+ L +L +PVDI
Sbjct: 542 VISAELQADLNRLTEKGIPVDI 563
>gi|372267428|ref|ZP_09503476.1| hypothetical protein AlS89_05999 [Alteromonas sp. S89]
Length = 580
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 300/579 (51%), Gaps = 83/579 (14%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL- 267
YA V LNA+L+ LSD ++ + +I A+ +MD++F WL+ + A EL
Sbjct: 73 YAPVELNADLSSLSDNQRQLIGKLIDASKIMDQLF-------------WLQSYGPAQELL 119
Query: 268 ----DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPL 323
D + IN PW L++N+ F+ G+
Sbjct: 120 SGIDDSAARKFAEINYGPWDRLNDNKPFIA-----------------GYG---------- 152
Query: 324 PKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDAT 383
KP GA FYP DM K EFE W QQ +++++R SG
Sbjct: 153 DKPLGAEFYPEDMTKQEFEAW-------QQPGKDGLYSLVRRDE--------SGK----- 192
Query: 384 NHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYD 443
L +PY + Y + L +A+ LL +A +A L +ADA L + +
Sbjct: 193 ---------LTLIPYHQAYKAELEKAATLLREAAALAEDAEFAGYLKLRADALLDDEFRA 243
Query: 444 SDIAWIELDS-ELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
SD+AW+++ S +DV IGP E YED +F Y+ + +++ ++D + ++ F L L+
Sbjct: 244 SDMAWMDMKSNRIDVVIGPIENYEDQLFAYRTAYSSYVLLKDMAWSEKLAKFAAFLPELQ 303
Query: 503 QNLPMDNAYKSKDV-IAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVML 560
+ LP+D YKS+ + + ++Y +GD G +T+A NLPNDE + +GT + L
Sbjct: 304 RGLPVDEKYKSETPGTDSDLNAYDVLYYAGDSNAGSKTIAINLPNDEEVQLKKGTRRLQL 363
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
KN AKF IL PIA V I ++Q++ + FD+FF + + HE HG+G T+ DG +
Sbjct: 364 KNAMRAKFDQILVPIAGVLIAEDQRKHITFDAFFANTMFHEVAHGLGIKK-TVTDG--AN 420
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
VR L+E SA+EE KADI+GL+ + L G+ L + YV+FLAG FRSVRFG
Sbjct: 421 VRQVLKETSSALEEGKADILGLYMITELHGKGELEDGELMDNYVTFLAGIFRSVRFGAAS 480
Query: 681 SHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + +SVDF K++ A+ LS+ ILTIQ GD + +
Sbjct: 481 AHGKANMMRFNFFKQEGAFSRDEASGLYSVDFTKMQAAMSKLSSVILTIQGDGDYKKSKA 540
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
LL++ ++ L+ L +L+ ++PVD+ TF ++L
Sbjct: 541 LLEEMGVVSAELQADLDRLKAAKIPVDV--TFIQGKEIL 577
>gi|256822792|ref|YP_003146755.1| hypothetical protein Kkor_1575 [Kangiella koreensis DSM 16069]
gi|256796331|gb|ACV26987.1| putative orphan protein [Kangiella koreensis DSM 16069]
Length = 577
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 293/574 (51%), Gaps = 73/574 (12%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 268
YA +L ++L+ LS K+ + L+I A +MD +F+ Q + KE A D
Sbjct: 70 YAPFTLTSDLSHLSANQKKMISLLIDAGKIMDNLFWKQAYGD--------KEALLAKIED 121
Query: 269 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 328
+ +IN PW LD N+ F+ D K G
Sbjct: 122 PKAKQFAIINYGPWDRLDGNKPFIEGYDV---------------------------KNKG 154
Query: 329 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 388
A FYP DM +FE W +Q+D +++++R L
Sbjct: 155 AQFYPADMTVAQFEAW-------EQKDKDGLYSLVRRDENGKLKL--------------- 192
Query: 389 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 448
VPYS + L AS LL A +A + K+ L +ADA L++NY SD AW
Sbjct: 193 -------VPYSVAFKDQLEEASRLLKGAALLAENEGFKKYLELRADALLTDNYQPSDFAW 245
Query: 449 IELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 507
+++ + ++V IGP E YED +FGYK F A++ I+D + ++ F L L++ LP+
Sbjct: 246 MDMKTNPVEVVIGPIENYEDQLFGYKTAFSAYVLIKDLAWSERLSRFAAFLPELQKGLPV 305
Query: 508 DNAYKSK-DVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
D YK + + + ++Y +GD G +T+A NLPNDE++ +GT + LKN +
Sbjct: 306 DEKYKQEMPGTDSDLNAYDVVYYAGDSNAGSKTIAINLPNDEQVQLAKGTRRLQLKNAMQ 365
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKF IL PI++ I EQ++ + FD+FF + + HE HG+G + DG +TVR L
Sbjct: 366 AKFDKILVPISEQLITPEQRKHITFDAFFANTMFHEVAHGLGIKNTI--DG-SNTVRAAL 422
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
++ SA+EE KADI+GL+ + L + + + YV+FLAG FRSVRFG +HG+
Sbjct: 423 KDTASALEEGKADILGLYMVSKLYEKGEIKDGELMDNYVTFLAGIFRSVRFGASSAHGRA 482
Query: 686 QALQFNWLFEKEAFILHSDDT-FSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
++FN+ E AF + +SV+FD++ A+++LS +ILTIQ GD E A LL++
Sbjct: 483 NMVRFNFFKEAGAFSRDPETGYYSVNFDRMTVAIDALSNKILTIQGDGDYEGAQKLLEEQ 542
Query: 745 CTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
+ L L+ LE Q+PVD+ TF ++L
Sbjct: 543 GIIDDQLASDLKLLEEKQIPVDV--TFNQGKEVL 574
>gi|71278966|ref|YP_267921.1| hypothetical protein CPS_1178 [Colwellia psychrerythraea 34H]
gi|71144706|gb|AAZ25179.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 576
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 298/569 (52%), Gaps = 69/569 (12%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
+++L Y V+L A+L+ LS K+ + L+I A+ +MD++F+ Q + + K
Sbjct: 63 FEQRLNIYKEVTLTADLSHLSANQKQMVALLIDASKIMDDLFWQQAFSQD-------KAS 115
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
AS D + IN PW L+ ++ FL+ +
Sbjct: 116 FLASISDLTVRRFAEINYGPWDRLNGDKVFLSQTTT------------------------ 151
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
K GA FYP DM K EFE +S ++K+ ++V++R ++ L
Sbjct: 152 ---KAHGAEFYPADMTKAEFE--QSEFSDKK-----GLYSVVRRDNDGKL---------- 191
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
SVP+SE Y+ +TRA+ +L +A A L +A A ++ Y
Sbjct: 192 ------------MSVPFSEIYHDQMTRAAAILDEAAKFADDKEFANYLTMRAQALRTDEY 239
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
SD AW+++ ++ +DV IGP E+YED ++GY+A FE+++ I+D + ++ + L
Sbjct: 240 QASDFAWMDMKNNPIDVVIGPIESYEDQLYGYRAAFESYVLIKDLAWSEKLAKYAQFLPE 299
Query: 501 LEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMV 558
L++ LP+ YK++ + A + +IY +G G +T+A NLPNDE + +GT +
Sbjct: 300 LQKGLPVGKKYKAEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLKKGTRRL 359
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
LKN AKF I+ PIAD I EQ++ V F FF + + HE HG+G + TL Q
Sbjct: 360 QLKNAMRAKFDAIMLPIADTLIVPEQRKNVTFTGFFANTMFHEVAHGLGIKN-TL--NGQ 416
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
VR L+E SA+EE KADI+GL+ ++ L+ + + ++ Y +F+AG FRS+RFG
Sbjct: 417 GPVRQALKEHASALEEGKADILGLYMIRQLLVKGAITDGTLEDYYTTFMAGIFRSIRFGA 476
Query: 679 EESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAAS 738
+HGK ++FN+ EK AF + +S++ DK+ A++SLS ILT+Q GD +
Sbjct: 477 SSAHGKANMVRFNYFQEKGAFSRNEQGLYSINVDKMTAAIDSLSELILTLQGNGDYQGVD 536
Query: 739 LLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+++ + + L L +LE ++PVDI
Sbjct: 537 SLVKESGVIGETLAADLARLEEAKIPVDI 565
>gi|449527576|ref|XP_004170786.1| PREDICTED: nudix hydrolase 3-like, partial [Cucumis sativus]
Length = 189
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 162/189 (85%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MA+ QEE+ DVLT TG+KTG++KPR +VHR GDYHR V+ IFAESTQELLLQ+RAD
Sbjct: 1 MAKPHTQEEYFDVLTKTGEKTGVSKPRGDVHRDGDYHRAVHVCIFAESTQELLLQQRADC 60
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
KDSWPG+WDISSAGHISAGDSSL +A++EL+EELGI LPKDAFE +F FLQ+ + N G+F
Sbjct: 61 KDSWPGLWDISSAGHISAGDSSLATARKELREELGIILPKDAFELIFVFLQETITNGGQF 120
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGY 180
I+NEFADVYLVTTLNPIP EAFTLQ++EVSAVKY+ Y E+K+LLA DP + PYDVN Y
Sbjct: 121 IDNEFADVYLVTTLNPIPFEAFTLQESEVSAVKYVHYLEFKSLLASKDPEYFPYDVNAQY 180
Query: 181 GQLFNIISQ 189
GQLF+II++
Sbjct: 181 GQLFDIIAK 189
>gi|392396486|ref|YP_006433087.1| Peptidase family M49 [Flexibacter litoralis DSM 6794]
gi|390527564|gb|AFM03294.1| Peptidase family M49 [Flexibacter litoralis DSM 6794]
Length = 561
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 304/562 (54%), Gaps = 69/562 (12%)
Query: 209 YAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELD 268
YA+ L +++ LS+++K+ + L+I+AA +MD +F+ Q + + +D L +
Sbjct: 55 YANFKLTTDISQLSESEKKMIPLLIEAAKIMDGLFWKQAYNGD---KDSLLATIKNQDAQ 111
Query: 269 KLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPG 328
K + IN W L++N F+ +G+E KP G
Sbjct: 112 K----FVQINYGLWDRLEQNRPFI--------------------EGVE-------EKPLG 140
Query: 329 ANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVG 388
ANFYP DM K E+E ++ ++ +S +T+++R SE L
Sbjct: 141 ANFYPTDMTKEEYEAFEG-------DEKSSLYTLLRRDSEGKL----------------- 176
Query: 389 SIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW 448
+VPY + Y + L + ++ L +A ++A SLK+ L +ADA ++++Y SD+AW
Sbjct: 177 -----MTVPYHKIYKTELEKTADYLRQAAEVAEDASLKKYLTLRADALVTDDYMASDMAW 231
Query: 449 IELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPM 507
+++ + +D+ IG ETYED +FG KA F +++ ++D + +++ + L L+++LP+
Sbjct: 232 MDMKTNGIDIIIGAIETYEDHLFGQKAAFSSYVLVKDKSWSERLEKYAALLPQLQKDLPV 291
Query: 508 DNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
+ YK+ K + + +++ GD G +T+A NLPNDE++ +GT LKN +
Sbjct: 292 EAKYKAEKPGSDSQLNAYDVVFYGGDCNAGSKTIAVNLPNDEQVQLKKGTRRSQLKNAMK 351
Query: 566 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLEL 625
AKF IL PI+++ I EQ++ + FD+FF + + HE HG+G + ++ TVR L
Sbjct: 352 AKFDQILLPISEMLITPEQRKHITFDAFFENTMFHEVAHGLGIKNTI---NKKGTVRESL 408
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKG 685
+++ SA+EE KAD++GL+ + L L + + Y +FLAG FRSVRFG +HGK
Sbjct: 409 KDMASALEEGKADVLGLYMVTKLREMGELSEGELMDNYTTFLAGIFRSVRFGAASAHGKA 468
Query: 686 QALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
++FN+ EK AF D T+ V+ +K+ AV LS +I+T+Q GD E + + +
Sbjct: 469 NMIRFNFFNEKGAFEKLEDGTYKVNPEKMAIAVNELSAKIITLQGDGDYEGVTKMTNEMG 528
Query: 746 TMTQPLKVALQKLENVQVPVDI 767
+ L+ L +L + +PVDI
Sbjct: 529 IIKADLQADLDRLSDANIPVDI 550
>gi|392309010|ref|ZP_10271544.1| hypothetical protein PcitN1_10126 [Pseudoalteromonas citrea NCIMB
1889]
Length = 560
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 307/575 (53%), Gaps = 74/575 (12%)
Query: 196 MERSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLR 255
+ERS +L Y V+L A+L+ L++ K+ L +I A+ +MD++F+ Q + +
Sbjct: 46 IERS-----RLDIYTEVTLTADLSHLNENQKKMLSKLIDASKIMDDLFWKQSFGMDKA-- 98
Query: 256 DWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGL 315
++L+ D DK + + IN PW L+ ++ FL+ G+
Sbjct: 99 EFLENIKD----DKAR-QFADINYGPWDRLNGDKVFLS-----------------GFTA- 135
Query: 316 EYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL 375
K PGA FYP D+ K E +S + QQ +++IKR ++ L
Sbjct: 136 ---------KTPGAEFYPHDISKDELN---TSTVKDQQ----GLYSLIKRDAQGKL---- 175
Query: 376 SGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADA 435
+SV YSE + S L +A+ LL +A ++A L+ +ADA
Sbjct: 176 ------------------FSVSYSEAFQSELVKAASLLREASNLARDKEFANYLNLRADA 217
Query: 436 FLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLF 494
L+N+Y SD AW+++ ++ +DV IGP ETYED +FGY+A FE+++ ++D + ++ F
Sbjct: 218 LLNNSYQRSDFAWMDMKNNPIDVVIGPIETYEDQLFGYRAGFESYVLVKDLAWSERLAKF 277
Query: 495 GDNLQVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKD 552
L L+ LP++ YK + + A + +IY +G G +T+A NLPNDE++ +
Sbjct: 278 AAFLPELQTGLPVEEKYKQEVPGSDADLNAYDVIYYAGHSNAGSKTIAINLPNDEQVQLE 337
Query: 553 RGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSIT 612
+GT + LKN AKF I+ PI++ I EQ++ + FD+FF + + HE HG+G +
Sbjct: 338 KGTRRLQLKNAMRAKFDKIMLPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTI 397
Query: 613 LPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFR 672
G TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y +F+AG FR
Sbjct: 398 TGKG---TVRQSLQEHASALEEGKADILGLYMVEQLLKKGEITEGTLEDYYTTFMAGIFR 454
Query: 673 SVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARG 732
SVRFG +HGK ++FN+ E+ AF + + V+ K+ A+++LS ILT+Q G
Sbjct: 455 SVRFGASSAHGKANMIRFNYFKEQGAFSKNEQGLYKVNMQKMAIAMKNLSQLILTLQGDG 514
Query: 733 DKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
D + S L+ + + L+ L KL +PVD+
Sbjct: 515 DYDKVSKLIATHGDIKAELQADLAKLSAANIPVDV 549
>gi|410646961|ref|ZP_11357402.1| nudix hydrolase 3 [Glaciecola agarilytica NO2]
gi|410133462|dbj|GAC05801.1| nudix hydrolase 3 [Glaciecola agarilytica NO2]
Length = 560
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 300/568 (52%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+ +L Y V L A+L+ LS K+ L L+I A+ +MD++F+ Q + S+ K
Sbjct: 45 ENRLDIYQAVPLTADLSSLSVNQKKMLSLLIDASKIMDDLFWQQAYGSD-------KAQF 97
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A DK + IN PW L+ ++ FLT
Sbjct: 98 LARIADKDVQKFAAINYGPWDRLNGDKPFLTNTKE------------------------- 132
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP DM K EFE + Q D T ++++ R N D SL+
Sbjct: 133 --KPLGAQFYPQDMTKDEFE-------QSQFADKTGLYSMVVR----NEDGSLA------ 173
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
SVPY+E ++ L +A+ LL+KA +A L+ +A A LSN Y
Sbjct: 174 ------------SVPYAEYFSEPLQKAAALLNKAATLADDAEFAHYLNLRAKALLSNEYQ 221
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +++ IGP ETYED +FGY+A FEA++ ++D + ++ + L L
Sbjct: 222 ASDFAWMDMKNNPIELVIGPIETYEDQLFGYRAAFEAYVLLKDLSWSERLSKYAAFLPEL 281
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+ NLP+ +AYK + A A + +IY +G G +T+A NLPNDE++ ++GT +
Sbjct: 282 QANLPVSDAYKKEMPGANADLNAYDVIYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 341
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF+NIL PIA+ I EQ+ + F++FF + + HE HG+G + +
Sbjct: 342 LKNAMRAKFENILVPIANELIVPEQRSNITFNAFFANTMFHEVAHGLGVKNTI---NNKG 398
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR L+E SA+EE KADI+GL+ + L+ + ++ + ++ Y +F+AG FRSVRFG
Sbjct: 399 TVRQALKEHASALEEGKADILGLYMVSQLLEKGVISEGTLEDYYTTFMAGIFRSVRFGAS 458
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ E AF ++D + V+ K+ A+++LS ILT+Q GD S
Sbjct: 459 SAHGKANMIRFNFFQEYGAFSRNADGLYKVNMAKMSEAIDALSRLILTLQGDGDYAGVSK 518
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + L L +L ++PVDI
Sbjct: 519 LVSDKGVIKPGLLADLARLTQAEIPVDI 546
>gi|410643660|ref|ZP_11354153.1| nudix hydrolase 3 [Glaciecola chathamensis S18K6]
gi|410136740|dbj|GAC12340.1| nudix hydrolase 3 [Glaciecola chathamensis S18K6]
Length = 560
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 304/568 (53%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+ +L Y V L A+L+ LS K+ L L+I A+ +MD++F+ Q + S+ +L A
Sbjct: 45 ENRLDIYQAVPLTADLSSLSANQKKMLSLLIDASKIMDDLFWQQAYGSDKA--QFLARIA 102
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
D +++ K + IN PW L+ ++ FLT
Sbjct: 103 D-NDVQK----FAAINYGPWDRLNGDKPFLTNTKE------------------------- 132
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
KP GA FYP +M K EFE + Q D T ++++ R N D SL+
Sbjct: 133 --KPLGAQFYPQNMTKDEFE-------QSQFADKTGLYSMVVR----NEDGSLA------ 173
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
SVPY+E ++ L +A+ LL+KA +A L+ +A A LSN Y
Sbjct: 174 ------------SVPYAEYFSEPLQKAAALLNKAATLADDAEFAHYLNLRAKALLSNEYQ 221
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +++ IGP ETYED +FGY+A FEA++ ++D + ++ + L L
Sbjct: 222 ASDFAWMDMKNNSIELVIGPIETYEDQLFGYRAAFEAYVLLKDLSWSERLSKYAAFLPEL 281
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+ NLP+ +AYK + A A + +IY +G G +T+A NLPNDE++ ++GT +
Sbjct: 282 QANLPVSDAYKKEMPGANADLNAYDVIYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 341
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF+NIL PIA+ I EQ+ + F++FF + + HE HG+G + +
Sbjct: 342 LKNAMRAKFENILVPIANELIVPEQRSNITFNAFFANTMFHEVAHGLGVKNTI---NNKG 398
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR L+E SA+EE KADI+GL+ + L+ + ++ + ++ Y +F+AG FRSVRFG
Sbjct: 399 TVRQALKEHASALEEGKADILGLYMVSQLLEKGVISEGTLEDYYTTFMAGIFRSVRFGAS 458
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ E AF ++D + V+ K+ A+++LS ILT+Q GD S
Sbjct: 459 SAHGKANMIRFNFFQEYGAFSRNADGLYKVNMAKMSEAIDALSRLILTLQGDGDYAGVSK 518
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + L L +L ++PVDI
Sbjct: 519 LVSDKGVIKPGLLADLARLTQAEIPVDI 546
>gi|255534124|ref|YP_003094496.1| hypothetical protein Phep_4243 [Pedobacter heparinus DSM 2366]
gi|255347108|gb|ACU06434.1| conserved hypothetical protein [Pedobacter heparinus DSM 2366]
Length = 552
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 299/591 (50%), Gaps = 79/591 (13%)
Query: 188 SQRYKENTMERSLTLQKQLRRYAH--------VSLNAELAGLSDADKEALVLVIKAATVM 239
SQ+ N + + + L+RY + V L L L+ +++ L L+I+AA +M
Sbjct: 18 SQKKSNNETKNNSSGNDSLQRYVNERLGIYETVKLTTNLNDLTVNERKILPLLIQAAKIM 77
Query: 240 DEIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAV 299
DE+F+ Q + L +K+ + ++ IN PW L+ ++ F+
Sbjct: 78 DELFWKQAYPQRDSLLSTIKDEKTKAFVE--------INYGPWDRLNGDKPFIAGIG--- 126
Query: 300 KLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSF 359
PKP ANFYP M K E E KS + +D
Sbjct: 127 ------------------------PKPAAANFYPAGMTKEELE--KSDV-----KDKFGL 155
Query: 360 FTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDM 419
++VI+R + +G L +VPY Y + L +AS LL +A +
Sbjct: 156 YSVIQRDT--------AGK--------------LTAVPYHILYAAELQKASNLLKQAALL 193
Query: 420 ASSPSLKRLLHSKADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEA 478
A K+ L+ +ADA +++ Y SD AW+++ + LD+ IGP E YED +F +A +E+
Sbjct: 194 AEDAGFKKYLNLRADALVTDVYGPSDYAWLDMKTNTLDIIIGPIENYEDKLFNARAAYES 253
Query: 479 FIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GP 536
++ ++D + ++ + L L++ LP++ YK+ K + + ++Y +GD G
Sbjct: 254 YVLVKDKVWSKRLAKYVSMLPDLQKGLPVEAKYKTEKPGTDSELNAYDVLYYAGDCNAGS 313
Query: 537 QTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTH 596
+T+A NLPNDE I + +GT LKN +AKF IL PIA I KEQQ+ V+FD+FF +
Sbjct: 314 KTIAVNLPNDEVIQQKKGTRRSQLKNAMKAKFDKILVPIAKELIDKEQQQYVNFDAFFAN 373
Query: 597 NICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPK 656
+ HE HG+G G V+ LQE +S +EE KAD++GL+ + L+ + L +
Sbjct: 374 VMFHEVAHGLGIKKTVTGKG---FVKEALQEQYSWLEEGKADVLGLYMVTGLLKKAEL-Q 429
Query: 657 SLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEG 716
+K+ Y +++AG RSVRFG +HGK FN+ E AFI +SD T+ VDF K EG
Sbjct: 430 GDIKAFYTTYMAGILRSVRFGAASAHGKANMQCFNFFKENGAFIRNSDGTYKVDFSKFEG 489
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
A+ LS I+ +Q GDK A +K ++ L+ L KL +PVDI
Sbjct: 490 AMNKLSRMIIMLQGNGDKAAVESTQKKMAVISPELQGDLDKLTKRGIPVDI 540
>gi|348028923|ref|YP_004871609.1| hypothetical protein GNIT_1498 [Glaciecola nitratireducens FR1064]
gi|347946266|gb|AEP29616.1| hypothetical protein GNIT_1498 [Glaciecola nitratireducens FR1064]
Length = 569
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 299/568 (52%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+ +L Y V+L A+L+ S ++ L L+I A+ +MD++F+ Q + +L +
Sbjct: 56 ESRLDIYYPVNLTADLSAYSVEQQKMLSLLIDASKIMDDLFWKQAFGKEK--SSFLAGIS 113
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
D K+K + IN PW L+ + AFL S +K
Sbjct: 114 DP----KIK-AFADINYGPWDRLNGDTAFL----SGIK---------------------- 142
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
K GA FYP DM K EFE +D ++++ R L +
Sbjct: 143 -EKSKGAEFYPADMSKEEFE-------AADFDDKEGLYSIVVRDESGKLSTK-------- 186
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
YS+ Y + LT A+ LL +A +A PS L+ +A A L+++Y
Sbjct: 187 --------------QYSQVYKAELTAAATLLEQAAKLAKDPSFANYLNMRAKALLTDDYQ 232
Query: 443 DSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ + +D+ IGP E YED ++GY+A FE+++ ++D + ++ + L L
Sbjct: 233 ASDFAWMDMKTNPIDIVIGPIEVYEDQLYGYRAAFESYVLLKDLSWSEKLAKYAAYLPEL 292
Query: 502 EQNLPMDNAYKSK-DVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
++ LP+ +AYK + A + +IY +G G +T+A NLPNDE + +GT +
Sbjct: 293 QKGLPVADAYKVQMPGTDADLNAYDVIYYAGHSNAGSKTIAINLPNDEEVQLQKGTRRLQ 352
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF +I+ PIA+ I +Q++ + FD+FF + + HE HG+G ++ +G
Sbjct: 353 LKNAMRAKFDHIMLPIAEQLIVAQQRQHITFDAFFGNTMFHEVAHGLGIKNLLNGEG--- 409
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR L+E SA+EE KADI+GL+ ++ L+ + ++ + +++ YV+F+AG FRS+RFG
Sbjct: 410 TVRQALKEHSSALEEGKADILGLYMVRQLLDKGVITEGILEDYYVTFMAGIFRSIRFGAS 469
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ ++ AF + + + VD +K+ A+++LS +IL +Q GD S
Sbjct: 470 SAHGKANMVRFNFFKQEGAFKRNEEGLYLVDIEKMGNAIDALSNKILVLQGDGDYAGVSD 529
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + L LQKL + Q+PVDI
Sbjct: 530 LVNSMGLIKPDLAADLQKLADAQIPVDI 557
>gi|339779711|gb|AEK06400.1| hypothetical protein [uncultured bacterium DY94]
Length = 566
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 294/572 (51%), Gaps = 73/572 (12%)
Query: 201 TLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
T +L Y SL +L+ LSD K + +I A+ +MDE+F+ Q + +
Sbjct: 51 TAASRLDIYTDFSLTTDLSHLSDNQKALIAKLIDASKIMDELFWRQAFGEDKA------- 103
Query: 261 HADASELDKLKWMYYL-INKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKA 319
A ++++ K + IN PW L+ ++ FL+ G E
Sbjct: 104 -AFLAKINDPKVQKFADINYGPWDRLNGDQTFLS--------------------GYE--- 139
Query: 320 SFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHI 379
K GA FYP D+ K E L D ++VIKR L
Sbjct: 140 ----EKTAGAQFYPADISKEE-------LNNADVTDKNGLYSVIKRDENGKL-------- 180
Query: 380 VDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN 439
YSV YS EY L +A+ LL +A +A L+ +ADA ++
Sbjct: 181 --------------YSVAYSIEYAQALEKAANLLREASKLADDKEFANYLNLRADALQND 226
Query: 440 NYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
+Y SD AW+++ ++ +DV IGP ETYED +FGY+A FE+++ ++D + ++ F L
Sbjct: 227 DYQASDFAWMDMKNNPIDVVIGPIETYEDQLFGYRAAFESYVLVKDLAWSERLAKFAAFL 286
Query: 499 QVLEQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTS 556
L++ LP+D YK + + A + ++Y +G G +T+A NLPNDE++ ++GT
Sbjct: 287 PELQKGLPVDAKYKQEVPGSDADLNAYDVVYYAGHSNAGSKTIAINLPNDEQVQLEKGTR 346
Query: 557 MVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG-PHSITLPD 615
+ LKN AKF IL PI++ I EQ++ + FD+FF + + HE HG+G ++IT
Sbjct: 347 RLQLKNAMRAKFDKILVPISEQLIVPEQRKHITFDAFFANTMFHEVAHGLGIKNTIT--- 403
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVR 675
+ TVR LQE SA+EE KADI+GL+ ++ L+ + + + ++ Y++F+AG FRSVR
Sbjct: 404 -NKGTVRQSLQEHASALEEGKADILGLYMVEQLLNKGEITEGTLEDYYITFMAGIFRSVR 462
Query: 676 FGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKE 735
FG +HGK ++FN+ ++ AF + +SV+ +K+ A+ LS ILT+Q GD +
Sbjct: 463 FGASSAHGKANMIRFNFFAQEGAFAKNEQGLYSVNMEKMGQAMAKLSRLILTLQGDGDYQ 522
Query: 736 AASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + + L L+KL +PVD+
Sbjct: 523 KVDQLIATHGDIKAELAKDLEKLSQANIPVDV 554
>gi|410622835|ref|ZP_11333657.1| hypothetical protein GPAL_2170 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410157600|dbj|GAC29031.1| hypothetical protein GPAL_2170 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 563
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 312/598 (52%), Gaps = 79/598 (13%)
Query: 192 KENTMERS--------LTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIF 243
+ENT E++ L + +L Y V L A+L+ S K+ L ++I A+ +MD++F
Sbjct: 31 QENTSEQTPVAAQSTLLVDESRLDIYYPVELTADLSSYSPNQKKMLSVLIDASKIMDDLF 90
Query: 244 YLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLP 303
+ Q + + K AS D + IN PW L+ + AFL+
Sbjct: 91 WKQAFGQD-------KSGFLASIEDPKIRAFADINYGPWDRLNGDTAFLS---------- 133
Query: 304 DATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVI 363
G+E K+ GA FYP DM K EFE ED ++++
Sbjct: 134 ----------GMEEKSK-------GAQFYPADMSKEEFE-------AANFEDKQGLYSIV 169
Query: 364 KRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSP 423
R NL + YS+ Y S LT A+ELL +A +A +
Sbjct: 170 VRDKNGNLSTQ----------------------KYSQVYKSELTAAAELLEQAATLAENK 207
Query: 424 SLKRLLHSKADAFLSNNYYDSDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGI 482
S L+ +A A L++NY SD AW+++ + +DV IGP E YED ++GY+A FE+++ +
Sbjct: 208 SFASYLNMRAKALLTDNYQASDFAWMDMKTNPIDVVIGPIEVYEDQLYGYRAAFESYVLL 267
Query: 483 RDDKATAQVKLFGDNLQVLEQNLPMDNAYKSK-DVIAAPIRVIQLIYNSGDVK-GPQTVA 540
+D + ++ + L L++ LP+D AYK++ A + +IY +G G +T+A
Sbjct: 268 KDLSWSEKLAKYAAYLPELQKGLPVDEAYKAQMPGTDADLNAYDVIYYAGHSNAGSKTIA 327
Query: 541 FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICH 600
NLPNDE + +GT + LKN AKF I+ PIA I ++Q++ V FD+FF + + H
Sbjct: 328 INLPNDEEVQLQKGTRRLQLKNAMRAKFDFIMLPIAQQLIVEQQRKHVTFDAFFGNTMFH 387
Query: 601 ECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK 660
E HG+G ++ +G TVR L+E SA+EE KADI+GL+ ++ L+ + + + +++
Sbjct: 388 EVAHGLGIKNLLSGEG---TVRQALKEHSSALEEGKADILGLYMVRQLLEKGAITEGVLE 444
Query: 661 SMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVES 720
YV+F+AG FRS+RFG +HGK ++FN+ ++ AF + + + VD +K+ A+++
Sbjct: 445 DYYVTFMAGIFRSIRFGASSAHGKANMVRFNFFKQEGAFKRNEEGLYLVDIEKMGNAIDA 504
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
LS +IL +Q G+ S ++ + L LQKL + Q+PVDI TF K+L
Sbjct: 505 LSNKILVLQGDGNYAGVSDMVATMGVIKPDLAADLQKLSDAQIPVDI--TFKQGKKIL 560
>gi|399060822|ref|ZP_10745776.1| Peptidase family M49 [Novosphingobium sp. AP12]
gi|398036958|gb|EJL30163.1| Peptidase family M49 [Novosphingobium sp. AP12]
Length = 568
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 303/574 (52%), Gaps = 61/574 (10%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L Q + A + ++ + A L+ +++ + L+IKA+ +M E++ Q + NP +R + +
Sbjct: 48 LAAQKAKLATIPMDVDTAFLTPEERDVVNLLIKASDLMSEVYLRQRYAENPQVRRAVSMN 107
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
A D L M+ N PW + + F T
Sbjct: 108 RRADR-DLLVEMFDR-NFGPWDEMADLHPFWGTT-------------------------- 139
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P P GA FYP D+ + + + + ++ + ++ S +TV++R E
Sbjct: 140 --PMPEGAGFYPEDLTRAQLDAYVAAHPD-EKAALLSPYTVVRREGE------------- 183
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
L +VPYS EY +L AS+LL +A S+ SLK+ L +A AF++++Y
Sbjct: 184 ----------KLVAVPYSVEYREWLEPASKLLEQAAARTSNASLKKFLSLRAKAFMTDDY 233
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
Y S++AW++L + ++V IGPYE Y D + G K +FE+F+ ++D + +A + + + L+
Sbjct: 234 YASELAWMDLAGTPIEVAIGPYEVYTDRLMGAKTSFESFVTLKDPEESAALAKYKNYLKD 293
Query: 501 LEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E NLP+++ YK+ +PI V + + GD V G QT+AFNLPNDER+ + +G V
Sbjct: 294 MEANLPIEDRYKNFARGFESPIAVAEQVRGGGDNVPGSQTIAFNLPNDERVREAKGAKKV 353
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
+L NV AKF+ IL+P+ + ++ +Q LV + HE H +GP SI + +G +
Sbjct: 354 ILSNVLGAKFERILQPMGPLVLKADQASLVAKSYMQYETLFHELSHSLGPGSIVV-NGEK 412
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TV L+E +SA+EEAKAD+ G+W + ++ + LP + ++ ++ G FR+VRFG
Sbjct: 413 TTVDKALKEQNSALEEAKADVAGVWNILLMMQKGELPAAERPQLFATYFTGIFRAVRFGA 472
Query: 679 EESHGKGQALQFNWLFEKEAFILH-SDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
E+HG+G ALQ+ +L AF + + VD K+E +++L +IL +QA GD
Sbjct: 473 VEAHGQGAALQYAYLRAHGAFTYDAAAKRYVVDDAKMEAGLKALLHDILMLQANGDYAGT 532
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
+ K+ + + A+ + +PVDI P +
Sbjct: 533 KAFMAKWAKLDAEAEAAIAAMGT--LPVDIRPVY 564
>gi|325279273|ref|YP_004251815.1| hypotheticak protein [Odoribacter splanchnicus DSM 20712]
gi|324311082|gb|ADY31635.1| hypotheticak protein [Odoribacter splanchnicus DSM 20712]
Length = 544
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 294/564 (52%), Gaps = 71/564 (12%)
Query: 208 RYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 267
+YA L +L+ L++ +K+ L L+I+AA M+ I++ Q Y + KE
Sbjct: 37 QYAEFPLTTDLSKLTEKEKQMLPLLIEAADQMEAIYW-QTAYGD-------KEQLFEGIT 88
Query: 268 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPP 327
D Y IN PW LD N FL TA PKP
Sbjct: 89 DPALLKYLSINYGPWDRLDANRPFLETAG---------------------------PKPL 121
Query: 328 GANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV 387
GANFYP DM K EFE +L + ++ D ++++++R + L
Sbjct: 122 GANFYPQDMTKSEFE----ALQDPRKND---WYSIVRRDDKGALKV-------------- 160
Query: 388 GSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA 447
+PY E Y + +A+ LL +A +A L+ L +++A L+++Y SD+A
Sbjct: 161 --------IPYHEAYPEQIRKAASLLKQAAQLAEDEGLRNYLTLRSEALLTDDYLKSDLA 212
Query: 448 WIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLP 506
W+++ D+ LD+ IGP ETYEDA+FGYKA+ I ++D + ++ L+ L L++NLP
Sbjct: 213 WMDMKDNTLDIVIGPIETYEDALFGYKASHSGQILVKDKDWSKKLSLYAQYLPKLQENLP 272
Query: 507 MDNAYKSKDVIAAP-IRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
+ AYK + A P + +IY +GD G + +A NLPND R+ +G+ + LKN
Sbjct: 273 VPAAYKKEKANANPDMNAYDVIYYAGDCNAGSKNIAINLPNDPRVHAAKGSRKLQLKNSM 332
Query: 565 EAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLE 624
+AKF ++ PIA + I EQQ+ + FD+FF + + HE HG+G TL G Q VR
Sbjct: 333 QAKFDKMVVPIARLVIDPEQQKHIRFDAFFENTMFHEVAHGLGV-KYTL-QGNQD-VRGA 389
Query: 625 LQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGK 684
L++ ++++EE KADI+GL+ + L ++ + YV+F+AG FRS RFG +HGK
Sbjct: 390 LKDNYTSIEEGKADILGLFCITKLAEWGVIQNKDLMDNYVTFIAGIFRSCRFGAASAHGK 449
Query: 685 GQALQFNWLFEKEAFILHSDDT-FSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
+QF E A +D +++DF+K++ +E ++ E +T++ GD + AS L+
Sbjct: 450 ANMMQFAHFIESGAITRDTDKGYYTIDFEKMKKDIEIIAGEYITLEGDGDYDKASQLIAT 509
Query: 744 YCTMTQPLKVALQKLENVQVPVDI 767
++ L+ L ++ +P DI
Sbjct: 510 KGIVSSILQKDLDRIAQAGIPKDI 533
>gi|332307710|ref|YP_004435561.1| hypothetical protein Glaag_3359 [Glaciecola sp. 4H-3-7+YE-5]
gi|332175039|gb|AEE24293.1| hypothetical protein Glaag_3359 [Glaciecola sp. 4H-3-7+YE-5]
Length = 560
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 303/568 (53%), Gaps = 69/568 (12%)
Query: 203 QKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHA 262
+ +L Y V L A+L+ LS K+ L L+I A+ +MD++F+ Q + S+ K
Sbjct: 45 ENRLDIYQAVPLTADLSSLSANQKKMLSLLIDASKIMDDLFWQQAYGSD-------KAKF 97
Query: 263 DASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFP 322
A DK + IN PW L+ ++ FLT ++ KLL
Sbjct: 98 LARIADKDVQKFAAINYGPWDRLNGDKPFLT--NTKEKLL-------------------- 135
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
GA FYP DM K EFE + Q D T ++++ R N D SL+
Sbjct: 136 -----GAQFYPQDMTKDEFE-------QSQFADKTGLYSMVVR----NEDGSLA------ 173
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYY 442
SVPY+E ++ L +A+ LL+KA +A L+ +A A LSN Y
Sbjct: 174 ------------SVPYAEYFSEPLQKAAALLNKAATLADDAEFAHYLNLRAKALLSNEYQ 221
Query: 443 DSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
SD AW+++ ++ +++ IGP ETYED +FGY+A FEA++ ++D + ++ + L L
Sbjct: 222 ASDFAWMDMKNNPIELVIGPIETYEDQLFGYRAAFEAYVLLKDLSWSERLSKYAAFLPEL 281
Query: 502 EQNLPMDNAYKSKDVIA-APIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVM 559
+ NLP+ +AYK + A A + +IY +G G +T+A NLPNDE++ ++GT +
Sbjct: 282 QANLPVSDAYKKEMPGANADLNAYDVIYYAGHSNAGSKTIAINLPNDEQVQLEKGTRRLQ 341
Query: 560 LKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
LKN AKF+NIL PIA+ I EQ+ + F++FF + + HE HG+G + +
Sbjct: 342 LKNAMRAKFENILVPIANELIVPEQRSNITFNAFFANTMFHEVAHGLGVKNTI---NNKG 398
Query: 620 TVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLE 679
TVR L+E SA+EE KADI+GL+ + L+ + ++ + ++ Y +F+AG FRSVRFG
Sbjct: 399 TVRQALKEHASALEEGKADILGLYMVSQLLEKGVISEGTLEDYYTTFMAGIFRSVRFGAS 458
Query: 680 ESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASL 739
+HGK ++FN+ E AF +++ + V+ K+ A+++LS ILT+Q GD S
Sbjct: 459 SAHGKANMIRFNFFQEYGAFSRNAEGLYKVNMAKMSEAIDALSRLILTLQGDGDYAGVSK 518
Query: 740 LLQKYCTMTQPLKVALQKLENVQVPVDI 767
L+ + L L +L ++PVDI
Sbjct: 519 LVSDKGVIKPGLLADLARLTQAEIPVDI 546
>gi|359398212|ref|ZP_09191236.1| MutT/NUDIX family protein [Novosphingobium pentaromativorans US6-1]
gi|357600630|gb|EHJ62325.1| MutT/NUDIX family protein [Novosphingobium pentaromativorans US6-1]
Length = 563
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 305/574 (53%), Gaps = 61/574 (10%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L Q + A + ++ E L+ ++ + L+IKA+ +M EI+ Q + NP +R + +
Sbjct: 43 LPAQKEKLATIRMDVETGFLNQEQRDVVNLLIKASDLMSEIYLRQRYAENPQVRRAVSMN 102
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
S+ D L M+ N PW L E F W S
Sbjct: 103 -RRSDRDLLVEMFDR-NFGPWDELAELHPF--------------------W------GST 134
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P+P+ GA FYP D+ + E + ++ E Q+E S +TV+KR +
Sbjct: 135 PMPE--GAGFYPEDLTREALEAYIAAHPE-QKEALLSPYTVVKREGD------------- 178
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
L +VPYS EY +L A++LL +A + SLK+ L +A AF +++Y
Sbjct: 179 ----------RLVAVPYSVEYRQWLEPAAQLLEQAAARTGNASLKKFLSLRARAFRTDDY 228
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
++S++AW++L + ++V IGPYE Y D + G K FE+F+ ++D + +A + + + L+
Sbjct: 229 FESELAWMDLTGTPIEVAIGPYEVYTDRLMGAKTAFESFVTLKDPQESAALAKYKNYLKD 288
Query: 501 LEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E NLP+++ YK+ + A+PI V + ++ GD V G QT+AFNLPNDER+ + +G V
Sbjct: 289 MEANLPIEDRYKNFQRGFASPIAVAEQVHGGGDNVPGVQTIAFNLPNDERVREAKGAKKV 348
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
+L NV AKF+ IL+P+ + + +Q LVD + HE H +GP +I + +G
Sbjct: 349 ILSNVLGAKFERILKPMGSLVLEPDQAALVDKKYMQFETLFHELSHSLGPGTIVV-NGET 407
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TV L+E SA+EEAKAD+ G+W + ++ + +P + ++ ++ G FR+VRFG
Sbjct: 408 TTVDKMLKEQGSALEEAKADVAGVWNILLMMRKGEIPAAEKPQLFATYFTGIFRAVRFGA 467
Query: 679 EESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
E+HGKG ALQ+ +L +K AF + + +D ++E V L +IL +QA GD
Sbjct: 468 VEAHGKGAALQYAYLLDKGAFRWDEAAGRYVIDDARMEAGVRDLLHDILMLQAHGDYAGT 527
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
+ K+ + + A+ + + +PVDI P +
Sbjct: 528 KAFMDKWAKLDAHAEAAIASMGS--LPVDIRPIY 559
>gi|334141216|ref|YP_004534422.1| MutT/NUDIX family protein [Novosphingobium sp. PP1Y]
gi|333939246|emb|CCA92604.1| MutT/NUDIX family protein [Novosphingobium sp. PP1Y]
Length = 563
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 182/574 (31%), Positives = 305/574 (53%), Gaps = 61/574 (10%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
L Q + A + ++ E L+ ++ + L+IKA+ +M EI+ Q + NP +R + +
Sbjct: 43 LPAQKEKLATIRMDVETGFLNQEQRDVVNLLIKASDLMSEIYLRQRYAENPQVRRAVSMN 102
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
S+ D L M+ N PW L E F W S
Sbjct: 103 -RRSDRDLLVEMFDR-NFGPWDELAELHPF--------------------W------GST 134
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
P+P+ GA FYP D+ + E + ++ + Q+E S +TV+KR +
Sbjct: 135 PMPE--GAGFYPEDLTREALEAYIAAHPD-QKEALLSPYTVVKREGD------------- 178
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
L +VPYS EY +L A++LL +A + SLK+ L +A AF +++Y
Sbjct: 179 ----------RLVAVPYSVEYRQWLEPAAQLLEQAAARTGNASLKKFLSLRARAFRTDDY 228
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
++S++AW++L + ++V IGPYE Y D + G K FE+F+ ++D + +A + + + L+
Sbjct: 229 FESELAWMDLTGTPIEVAIGPYEVYTDRLMGAKTAFESFVTLKDPQESAALAKYKNYLKD 288
Query: 501 LEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGD-VKGPQTVAFNLPNDERIVKDRGTSMV 558
+E NLP+++ YK+ + A+PI V + ++ GD V G QT+AFNLPNDER+ + +G V
Sbjct: 289 MEANLPIEDRYKNFQRGFASPIAVAEQVHGGGDNVPGVQTIAFNLPNDERVREAKGAKKV 348
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
+L NV AKF+ IL+P+ + + +Q LVD + HE H +GP +I + +G
Sbjct: 349 ILSNVLGAKFERILKPMGSLVLEPDQAALVDKKYMQFETLFHELSHSLGPGTIVV-NGET 407
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL 678
+TV L+E SA+EEAKAD+ G+W + ++ + +P + ++ ++ G FR+VRFG
Sbjct: 408 TTVDKMLKEQGSALEEAKADVAGVWNILLMMRKGEIPAAEKPQLFATYFTGIFRAVRFGA 467
Query: 679 EESHGKGQALQFNWLFEKEAFIL-HSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAA 737
E+HGKG ALQ+ +L +K AF + + +D ++E V L +IL +QA GD
Sbjct: 468 VEAHGKGAALQYAYLLDKGAFRWDEAAGRYVIDNTRMEAGVRDLLHDILMLQAHGDYAGT 527
Query: 738 SLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
+ K+ + + A+ + + +PVDI P +
Sbjct: 528 KAFMDKWAKLDAHAEAAIASMGS--LPVDIRPIY 559
>gi|374384873|ref|ZP_09642388.1| hypothetical protein HMPREF9449_00774 [Odoribacter laneus YIT
12061]
gi|373227264|gb|EHP49580.1| hypothetical protein HMPREF9449_00774 [Odoribacter laneus YIT
12061]
Length = 544
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 296/565 (52%), Gaps = 73/565 (12%)
Query: 208 RYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASEL 267
+YA +L + + L++ +K+ + L++KAA VM+ I++ + + L D ++
Sbjct: 36 QYAEFTLTTDTSTLTENEKQVIPLLMKAADVMEVIYWQNAYGNRAALLDTVQ-------- 87
Query: 268 DKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPP 327
D Y IN PW L+ N F+ + KP
Sbjct: 88 DPYLAKYIAINYGPWDRLNGNAPFIPGVQA---------------------------KPL 120
Query: 328 GANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSV 387
GANFYP DM EFE K T +++V++R NL
Sbjct: 121 GANFYPTDMTTEEFEALKDPRK-------TDWYSVLRRDENGNLK--------------- 158
Query: 388 GSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA 447
VP+ E Y + +A++LL +A + LK L+ +A A LS++Y SD+A
Sbjct: 159 -------VVPFHEAYPAETAQAADLLKQAAALTEDAELKNYLNLRAAALLSDDYLASDLA 211
Query: 448 WIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLP 506
W+++ ++ LD+ IGP ETYEDA+FGYKA+ + ++D + ++ L+ L L++NLP
Sbjct: 212 WMDMKNNTLDIVIGPIETYEDALFGYKASHSGQVLVKDKDWSKKLALYAGYLPKLQENLP 271
Query: 507 MDNAYKSKDVIAAP-IRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
++ AYK + A P + V ++IY +GD G + +A NLPND R+ +G+ + LKN
Sbjct: 272 VEAAYKKEKANANPDMNVYEVIYYAGDCNAGSKNIAINLPNDPRVHAAKGSRKLQLKNAM 331
Query: 565 EAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLE 624
+AKF NIL PI+ + I EQQ+ + FD+FF + + HE HG+G I + +R
Sbjct: 332 QAKFDNILVPISQLVITPEQQKHIRFDAFFENTMFHEVAHGLG---IKYTLKNKQDIRTA 388
Query: 625 LQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGK 684
L++ ++++EE KADI+GL+ + L ++L + YV+F+AG FRS RFG +HGK
Sbjct: 389 LKDNYTSIEEGKADILGLYCITKLAEWNVLENKDLMDNYVTFIAGIFRSCRFGAASAHGK 448
Query: 685 GQALQFNWLFEKEAFILHSDDT--FSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
+QF E A I +T ++V+F+K++ + +++ E +T++ G+ E A+ L+Q
Sbjct: 449 ANMMQFAHFIESGA-ITQDPETGYYTVNFEKMKADITAIAREYITLEGDGNYEKATQLIQ 507
Query: 743 KYCTMTQPLKVALQKLENVQVPVDI 767
+ ++ L+ L K+ N +P DI
Sbjct: 508 EKGIVSPALQKDLDKIANAGIPKDI 532
>gi|409098405|ref|ZP_11218429.1| hypothetical protein PagrP_08359 [Pedobacter agri PB92]
Length = 559
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 292/567 (51%), Gaps = 71/567 (12%)
Query: 204 KQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHAD 263
++L Y V L L LS D++ L L+I+AA +MD++++ Q + L +K+
Sbjct: 49 QRLPIYEKVKLTTNLNQLSINDRKILPLLIQAAEIMDDLYWKQAYPQRDSLLATIKDEKT 108
Query: 264 ASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPL 323
++ IN PW L+ + F+ +
Sbjct: 109 REFVN--------INYGPWDRLNNEKPFVAGVGA-------------------------- 134
Query: 324 PKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDAT 383
KP GA+FYP + K E E KS+L +K ++VI++ + +G
Sbjct: 135 -KPEGASFYPYGITKAEIE--KSNLADK-----FGAYSVIQKDT--------AGK----- 173
Query: 384 NHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYD 443
L +VPY + + L RAS LL +A +A LK+ L+ +ADA +++N+
Sbjct: 174 ---------LTTVPYHVLFAAELQRASSLLKQAALIAEDAGLKKYLNLRADALVTDNFTA 224
Query: 444 SDIAWIELDSE-LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
SD AW+++ + LD+ IGP E YED +F + ++EA++ I+D + + ++ + L L+
Sbjct: 225 SDYAWLDMKTNGLDIIIGPIENYEDKLFNARTSYEAYVLIKDKEWSMRLAKYVKMLPELQ 284
Query: 503 QNLPMDNAYKSKD-VIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVML 560
+NLP+ YK++ + + ++Y +GD G +T+A NLPNDE+I +++GT L
Sbjct: 285 KNLPVAAKYKTESPGTDSELNAYDVVYYAGDCNAGSKTIAVNLPNDEKIQQEKGTRRSQL 344
Query: 561 KNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
KN +AKF IL PI+ I +QQ+ + FD+FF + + HE HG+G G
Sbjct: 345 KNAMQAKFDKILVPISKELIDADQQKYIKFDAFFANVMFHEVAHGLGIKKTITGKG---F 401
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE 680
VR L+E +S +EE KAD++GL+ + L+ + L +K Y +F+AG RSVRFG+ E
Sbjct: 402 VREALKEQYSWLEEGKADVLGLYMVTGLLKKGELAGD-IKDYYTTFMAGILRSVRFGVSE 460
Query: 681 SHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLL 740
+HGK FN+ EK AF S T+ V+F+K A+ LS I+T+Q GDK A
Sbjct: 461 AHGKANMQCFNYFQEKGAFERTSKGTYKVNFEKFATAMNELSAFIITLQGNGDKVAVEKA 520
Query: 741 LQKYCTMTQPLKVALQKLENVQVPVDI 767
++ ++ L+ L +L +PVD+
Sbjct: 521 QKEKAVISTELQKDLDRLTRKSIPVDV 547
>gi|111226842|ref|XP_643691.2| hypothetical protein DDB_G0275419 [Dictyostelium discoideum AX4]
gi|90970798|gb|EAL69775.2| hypothetical protein DDB_G0275419 [Dictyostelium discoideum AX4]
Length = 540
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 298/575 (51%), Gaps = 76/575 (13%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
+K + +Y+ +SL +++ LS DK + ++ A+ ++D+IF+ Q + K+
Sbjct: 24 FKKLINQYSVISLEKDISYLSKNDKLMIEILFNASKIVDDIFWKQTLGKS-------KQQ 76
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
+ DK Y IN PW L+ + +F+ +
Sbjct: 77 FLVNYKDKDIREYCSINYGPWDRLNNDNSFIDGIGN------------------------ 112
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVD 381
KPP NFYP D+ + EF+ + +SL + S +TV++R +
Sbjct: 113 ---KPPTLNFYPLDITEDEFDNFNNSLKK-------SSYTVLRRDN-------------- 148
Query: 382 ATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY 441
G +L + Y++EY + + + S LL KA + +S K L ++ A ++ Y
Sbjct: 149 ------GQSKNLKCIWYNQEYKTEVMKISNLLMKASNYSSDKGFKEYLKKRSIALSNDQY 202
Query: 442 YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQV 500
YDSDI W+E+ ++ +++ IGP ETY+D G KA+F++ + I+D + ++K + L
Sbjct: 203 YDSDITWMEMTNNPIEIVIGPIETYDDTFKGLKASFQSQLLIKDLVWSEKIKKYNSMLPE 262
Query: 501 LEQNLPM-DNAYKSKDVIAAP--IRVIQLI--YNSGDVKGPQTVAFNLPNDERIVKDRGT 555
L++NLP+ D YKS+ ++ + V LI Y SG+ GP+ +A NLPND ++ D+GT
Sbjct: 263 LQENLPVEDKKYKSEKSGSSKGDMYVYDLIASYGSGNA-GPKNIAINLPNDPKVQLDKGT 321
Query: 556 SMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNIC-HECCHGIGPHSITLP 614
+ +KN+ +AKF IL PIA I Q + V F++ F N+ HE HG+G L
Sbjct: 322 RKIQIKNLMKAKFDEILMPIAKRVIDPTQLKHVTFENGFFENVMFHEISHGLGVK--FLV 379
Query: 615 DGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSV 674
DG ++V L+ +S +EEAKADI+G++ + +L +L+ + YVS++AG FRSV
Sbjct: 380 DGSGTSVHQALEVYYSPLEEAKADILGIYFITYLAEHNLISNKDLMDNYVSYIAGIFRSV 439
Query: 675 RFGLEESHGKGQALQFNWLFEKEAFILHS-DDTFSVDFDKVEGAVESLSTEILTIQARGD 733
RFG +H K L FN+L + AF +S + FSV+F+K++ A+ L IL IQ G+
Sbjct: 440 RFGSSNAHAKANTLNFNFLHKYGAFEKNSTTNYFSVNFNKMKLAIPKLVNHILVIQGNGN 499
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIA 768
K+AA Q + L + ++ +P+DI
Sbjct: 500 KKAA----QSWINEMGTLNIEDIIIDYSGIPIDIV 530
>gi|224075732|ref|XP_002304741.1| predicted protein [Populus trichocarpa]
gi|222842173|gb|EEE79720.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/162 (75%), Positives = 142/162 (87%), Gaps = 1/162 (0%)
Query: 290 AFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLT 349
AFLTT DSA+KLLP+ATKPV+GWKGLEYKA+FP+ KPPGANFYPPDMDK EF+LW SLT
Sbjct: 5 AFLTTTDSAIKLLPEATKPVSGWKGLEYKAAFPMLKPPGANFYPPDMDKKEFKLWNDSLT 64
Query: 350 EKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRA 409
EK+Q DA FFTVIKR SEF+LDSS H V TNH + + +DLYSVPYS+EYNS+L +A
Sbjct: 65 EKEQNDAMGFFTVIKRHSEFSLDSSSPNHAVHGTNH-LMTAHDLYSVPYSKEYNSFLRKA 123
Query: 410 SELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIEL 451
+ELLH+AGD+A SPSLKRLLHSKADAFLSN+YY+SDIAW+EL
Sbjct: 124 AELLHEAGDLAGSPSLKRLLHSKADAFLSNDYYESDIAWMEL 165
>gi|330789572|ref|XP_003282873.1| hypothetical protein DICPUDRAFT_73875 [Dictyostelium purpureum]
gi|325087157|gb|EGC40537.1| hypothetical protein DICPUDRAFT_73875 [Dictyostelium purpureum]
Length = 530
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 280/567 (49%), Gaps = 73/567 (12%)
Query: 206 LRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADAS 265
L +Y+ L A + L++ DK+ L + K + +MD+IF+L+ S D+LK
Sbjct: 23 LNQYSEFKLEANIDHLNEDDKKMLNYLFKVSDIMDDIFWLE---SIGEKSDFLKSIKSKD 79
Query: 266 ELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKP-VNGWKGLEYKASFPLP 324
E + Y IN PW E KP +NG+
Sbjct: 80 EKE-----YAKINYGPWDKFTE-------------------KPFINGYG----------K 105
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
KP GA FYP D+ + EF+ K+ ++ S++T++KR
Sbjct: 106 KPKGAKFYPDDITEKEFDQLKN-------KEKDSWYTLLKR-----------------NK 141
Query: 385 HSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDS 444
H LY+ Y EE+ + +A+ LL A +++ S K L +A A ++ YY+S
Sbjct: 142 HG-----QLYTKWYHEEFADQIKKAASLLESASKYSTNQSFKNYLKLRAKALRTDEYYES 196
Query: 445 DIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
DIAW++L ++ +D +GP E+Y D G KA A I I+D + +++ + L L++
Sbjct: 197 DIAWMDLTNNTIDFIVGPIESYADGFKGIKAAHSAQILIKDLDWSKRIEKYNGMLPQLQE 256
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSMVMLKN 562
NLP+ + YK + V L+Y GD G + +A NLPND + K +GT + LKN
Sbjct: 257 NLPVSSLYKQDQTSKGDMYVYYLVYCRGDYNWGSKNIAINLPNDPNVQKVKGTRKLQLKN 316
Query: 563 VSEAKFKNILRPIADVCIRKEQQELVDFD-SFFTHNICHECCHGIGPHSITLPDGRQSTV 621
+AK++ IL P+A++ + + Q + V FD FF + + HE HG G + +V
Sbjct: 317 AMQAKYERILIPMANILVDESQLKHVVFDDGFFQNTMFHEVAHGFGVKFVVT--NSSISV 374
Query: 622 RLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEES 681
R L+E +S++EEAKADI G++ +++L+ + L ++ Y S+LAG RS+RFG +
Sbjct: 375 RKALEETYSSLEEAKADITGIFFIQYLVNKGELKLDIM-DCYTSYLAGVLRSIRFGESTA 433
Query: 682 HGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
HG + +N++ E F + VD DK+E AV L I+TIQ G+K+ A +
Sbjct: 434 HGLANMISYNFITEMGGFNKTELGKYRVDKDKMEKAVSELVKRIITIQGDGNKKVAQKFI 493
Query: 742 QKYCTMTQPLKVALQKLENVQVPVDIA 768
+KY + LK L + +P DI
Sbjct: 494 EKYGYIKDELKEHLDTISKAGIPKDIV 520
>gi|116620129|ref|YP_822285.1| Zn-dependent hydrolase [Candidatus Solibacter usitatus Ellin6076]
gi|116223291|gb|ABJ82000.1| Zn-dependent hydrolase [Candidatus Solibacter usitatus Ellin6076]
Length = 536
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 289/579 (49%), Gaps = 71/579 (12%)
Query: 199 SLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWL 258
+LT ++L ++ V + + LS +++ + L+ A ++DE+++ Q S+ +
Sbjct: 22 ALTPAQRLAQWKPVEMPFAASNLSANERKMIALLGDACRLLDEVYWQQ---SDKTGFELY 78
Query: 259 KEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYK 318
+ DA +L +L I S W LDEN F+
Sbjct: 79 RTTKDA-DLKRL----LQIMGSRWDLLDENRPFVGNE----------------------- 110
Query: 319 ASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSF--FTVIKRRSEFNLDSSLS 376
P PPG +P D+ + + E + + + E A + +V+KR+ +
Sbjct: 111 -----PMPPGHELFPHDLTRAQIEQY---VQQHPGEKAALYDEHSVVKRQGQ-------- 154
Query: 377 GHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAF 436
L +VPY EY +L ++ L +A +A + L +ADA
Sbjct: 155 ---------------RLIAVPYHVEYKRWLEPMAKDLREAAALAPDTAFANFLRLRADAL 199
Query: 437 LSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFG 495
L+++YY SD+AW++L D ++DV PYETY D + G K ++ A I IR++ +A++ ++
Sbjct: 200 LTDDYYPSDLAWLDLKDPKIDVIFAPYETYTDDLLGIKTSYGASILIRNEPESAKLAVYQ 259
Query: 496 DNLQVLEQNLPMDNAYK-SKDVIAAPIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDR 553
+ ++ LP+D A + SK P+ V+ Y +GD+ G Q VA NLPND RI + +
Sbjct: 260 KYVPEIQDALPLDPADRPSKRGHLTPMEVMDAPYRTGDLLHGYQAVADNLPNDPRIHEKK 319
Query: 554 GTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
G+ + KN +A+ ++ PIA ++ Q + + + HE CHG+GP + +
Sbjct: 320 GSKKIFFKNFMDARVNFVILPIAQKLMQPAQAAKASGEGYLAGTLLHEICHGLGP-AFSR 378
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
G+Q +R + +S +EEAKAD+VG++ LK+L+ LP ++ Y S++AG FR+
Sbjct: 379 KAGKQVDIREGIGPAYSGLEEAKADVVGMFGLKWLVDHKALPAGRLEEYYASYVAGLFRT 438
Query: 674 VRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGD 733
+RFG E+HG+ + ++FN+L E A + H++ +++D+ ++ + L+ E+L I+A GD
Sbjct: 439 LRFGTGEAHGRAEMMEFNYLLENHA-LSHANGRYTIDYSRMPATLAQLAKELLQIEATGD 497
Query: 734 KEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFT 772
+ A KY M P + +PVDI P +
Sbjct: 498 RARAESWFAKYDNM--PAALTAALAATKGIPVDIEPIYA 534
>gi|189461234|ref|ZP_03010019.1| hypothetical protein BACCOP_01881 [Bacteroides coprocola DSM 17136]
gi|189432051|gb|EDV01036.1| hypothetical protein BACCOP_01881 [Bacteroides coprocola DSM 17136]
Length = 549
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 170/591 (28%), Positives = 285/591 (48%), Gaps = 82/591 (13%)
Query: 186 IISQRYKENTMERSLTLQKQLRRYAHVSLNAELAG-LSDADKEALVLVIKAATVMDEIFY 244
+ S + +T ++ ++ ++ YAHV L ++L L+D +KE + + + + D++F
Sbjct: 18 VASTLFSCSTQQQESPMKAKVEEYAHVELKSDLVNNLNDKEKELVKIFFQVGEITDDLF- 76
Query: 245 LQVWYSNPVLRDWLKEHADASELDKLKWMYY----LINKSPWSSLDENEAFLTTADSAVK 300
W + D S+LD + Y +I+ W LD N+ FL
Sbjct: 77 ------------WQQTFGDKSQLDTITDSYAKEFAMIHYGAWDRLDNNKPFLA------- 117
Query: 301 LLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF 360
G+ KP N+YP D+ EF+ ++ + + S++
Sbjct: 118 ----------GYG----------EKPAVCNYYPHDITAEEFDAFEDA-------NKNSWY 150
Query: 361 TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA 420
TVI+R N D SL SV Y E Y + R LL KA +A
Sbjct: 151 TVIRR----NEDGSLK------------------SVWYHEAYAEEIGRICALLEKAVTLA 188
Query: 421 SSPSLKRLLHSKADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAF 479
P L+ L + +AF +++Y +SD+AW+++ DS++D GP E+Y+D KA++E+F
Sbjct: 189 EDPGLENYLEKRIEAFKTDDYLESDLAWMDMKDSKIDFVTGPIESYDDKFQETKASYESF 248
Query: 480 IGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQ 537
I ++D+ + + F L L++ LP YK+ ++ + V +Y +GD G +
Sbjct: 249 ILLKDEARSKDLAKFVAMLPALQKELPCAPEYKTFVPGTSSDLNVYDAVYYAGDCNAGSK 308
Query: 538 TVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHN 597
T+A NLPNDER+ +GT + L+N +AKF IL PI + + EQQ+ ++FD+FF +
Sbjct: 309 TIAINLPNDERVHALKGTRRLQLRNSMKAKFDKILMPIGQLIVTPEQQKYLNFDAFFWNV 368
Query: 598 ICHECCHGIG-PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPK 656
HE HG+G +I + + + E ++ EEAKADI+GL+ + LI +
Sbjct: 369 TFHEVAHGLGVKQTINTNESVDAVMGTE----KTSWEEAKADILGLFMVTKLIEMGEITN 424
Query: 657 SLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEG 716
+ +++AG RSVRFG SHGK + FN++ + AF + + +DF K +
Sbjct: 425 ITAEDAIATYIAGILRSVRFGAASSHGKANMMCFNYMEKAGAFSRDAKGQYVIDFGKAKE 484
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
A+ + IL Q G+ E A+ + +T L+ L K+ +P DI
Sbjct: 485 AMNGWAALILQTQGDGNVEFATKYRAENGGITPALQADLDKINGAGIPRDI 535
>gi|224023907|ref|ZP_03642273.1| hypothetical protein BACCOPRO_00624 [Bacteroides coprophilus DSM
18228]
gi|224017129|gb|EEF75141.1| hypothetical protein BACCOPRO_00624 [Bacteroides coprophilus DSM
18228]
Length = 549
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 284/591 (48%), Gaps = 82/591 (13%)
Query: 186 IISQRYKENTMERSLTLQKQLRRYAHVSLNAELAG-LSDADKEALVLVIKAATVMDEIFY 244
+ S + ++ ++ ++ ++ YA V L ++L LSD +KE + + + + D++F
Sbjct: 18 VASTLFSCSSQQQESPMKAKVEEYASVELKSDLVNNLSDKEKELVRIFFQVGKITDDLF- 76
Query: 245 LQVWYSNPVLRDWLKEHADASELDKLKWMYY----LINKSPWSSLDENEAFLTTADSAVK 300
W + D S+LD + Y +I W LD+N+ FLT
Sbjct: 77 ------------WKQTFGDKSKLDTITDSYAKQFAMIQYGAWDRLDDNKPFLT------- 117
Query: 301 LLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF 360
G+ KP N+YP D+ + EF ++ + D S++
Sbjct: 118 ----------GYG----------EKPDVCNYYPLDITEAEFNAFEDA-------DKDSWY 150
Query: 361 TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA 420
TVI+R N D SL SV Y E Y + + LL KA +A
Sbjct: 151 TVIRR----NDDGSLK------------------SVWYHEAYAPEIRQICALLEKAVTLA 188
Query: 421 SSPSLKRLLHSKADAFLSNNYYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAF 479
P LK L + +AF +++Y DSD+AW+++ DS++D GP ETY+D KA++E+F
Sbjct: 189 EDPGLKNYLEKRIEAFKTDDYLDSDLAWMDMKDSKVDFVAGPIETYDDKFRETKASYESF 248
Query: 480 IGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQ 537
I ++D+ + + F L L++ LP YK+ ++ + V +Y +GD G +
Sbjct: 249 ILLKDEARSKDLAKFVAMLPALQKELPCPPEYKTFVPGTSSDLNVYDAVYYAGDCNAGSK 308
Query: 538 TVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHN 597
T+A NLPNDER+ +GT + L+N +AKF IL PI + + EQQ+ ++FD+FF +
Sbjct: 309 TIAINLPNDERVHALKGTRRLQLRNSMKAKFDKILLPIGQLVVTPEQQKYLNFDAFFWNV 368
Query: 598 ICHECCHGIG-PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPK 656
HE HG+G +I + + + E ++ EEAKADI+GL+ + LI +
Sbjct: 369 TFHEVAHGLGVKQTIRTNESVDAVMGTE----KTSWEEAKADILGLFMVTKLIEMGEITN 424
Query: 657 SLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEG 716
+ +++AG RSVRFG SHGK + FN++ + AF + + +DF K +
Sbjct: 425 ITPEDAITTYIAGILRSVRFGAASSHGKANMMCFNYMEKAGAFSRDAKGQYVIDFTKAKE 484
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
A+ + IL Q G+ E A + +T L+ L ++ +P DI
Sbjct: 485 AMNGWAALILQTQGDGNVEFAKKYRAENGGITPALQADLDRINGAGIPRDI 535
>gi|198274877|ref|ZP_03207409.1| hypothetical protein BACPLE_01036 [Bacteroides plebeius DSM 17135]
gi|198272324|gb|EDY96593.1| hypothetical protein BACPLE_01036 [Bacteroides plebeius DSM 17135]
Length = 549
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/571 (29%), Positives = 274/571 (47%), Gaps = 74/571 (12%)
Query: 202 LQKQLRRYAHVSLNAELAG-LSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKE 260
++ ++ YA V L ++L LSD +KE + + + + D++F+ Q + +L
Sbjct: 34 MKAKVEEYASVELKSDLVNNLSDKEKELVRIFFQVGKITDDLFWKQTFGDKSLLDTITDS 93
Query: 261 HADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKAS 320
+A + +I+ W LD N+ FL G+
Sbjct: 94 YAKE---------FAMIHYGAWDRLDNNKPFLA-----------------GYG------- 120
Query: 321 FPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIV 380
KP N+YP D+ + EF + + E+ S++TVI+R N D SL
Sbjct: 121 ---EKPDVCNYYPLDITEAEFNAF-------EDENKDSWYTVIRR----NEDGSLK---- 162
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
SV Y E Y + R LL KA +A P LK L + +AF +++
Sbjct: 163 --------------SVWYHEAYAPEIERICALLEKAVALAEDPGLKTYLEKRIEAFKTDD 208
Query: 441 YYDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQ 499
Y SD+AW+++ DS++D GP ETY+D KA++E+FI ++D+ + + F L
Sbjct: 209 YLASDLAWMDMKDSKIDFVTGPIETYDDKFRETKASYESFILLKDEARSKDLAKFVAMLP 268
Query: 500 VLEQNLPMDNAYKS-KDVIAAPIRVIQLIYNSGDVK-GPQTVAFNLPNDERIVKDRGTSM 557
L++ LP YK+ ++ + V +Y +GD G +T+A NLPNDER+ +GT
Sbjct: 269 ALQKELPCPPEYKTFVPGTSSDLNVYDAVYYAGDCNAGSKTIAINLPNDERVHALKGTRR 328
Query: 558 VMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIG-PHSITLPDG 616
+ L+N +AKF IL PI + + EQQ+ ++FD+FF + HE HG+G +I +
Sbjct: 329 LQLRNSMKAKFDKILLPIGQLVVTPEQQKYLNFDAFFWNVTFHEVAHGLGVKQTIRTNES 388
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRF 676
+ + E ++ EEAKADI+GL+ + LI + K +++AG RSVRF
Sbjct: 389 VDAVMGTE----KTSWEEAKADILGLFMVTKLIEMGEITNITAKDAMATYIAGILRSVRF 444
Query: 677 GLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEA 736
G SHGK + FN++ + AF + +DF K + A+ + IL Q G+ E
Sbjct: 445 GAASSHGKANMMCFNYMEKAGAFSRDDKGQYVIDFAKAKEAMNGWAALILQTQGDGNVEF 504
Query: 737 ASLLLQKYCTMTQPLKVALQKLENVQVPVDI 767
A ++ +T L+ L ++ +P DI
Sbjct: 505 AKKYREENGGITPALQADLDRINGAGIPRDI 535
>gi|94970474|ref|YP_592522.1| Zn-dependent hydrolase [Candidatus Koribacter versatilis Ellin345]
gi|94552524|gb|ABF42448.1| Zn-dependent hydrolase [Candidatus Koribacter versatilis Ellin345]
Length = 574
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 215/389 (55%), Gaps = 6/389 (1%)
Query: 392 DLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIEL 451
+L ++PY Y ++L A+ L +A +A + L +ADA L+++YY SD+AW+EL
Sbjct: 188 ELQAIPYHVAYRAFLEPAARALKEASALARDKAFANFLRMRADALLNDDYYPSDVAWLEL 247
Query: 452 -DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNA 510
+ D+ + PYETY D + G + ++ A + IR+D + ++ L+ + ++Q LP+
Sbjct: 248 QNPRFDIIMAPYETYLDDLLGVRTSYGAAVLIRNDHESRRLDLYEKYVPEMQQALPLTAE 307
Query: 511 YK-SKDVIAAPIRVIQLIYNSGDV-KGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKF 568
K SK+ P+ V+ + +GD+ G Q VA NLPND +I ++GT + KN +A+
Sbjct: 308 DKPSKEGQRMPMEVMDAPFRTGDLGHGYQAVADNLPNDPKIHAEKGTKKIFFKNFMDARV 367
Query: 569 KNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQEL 628
++ P+A + + Q V + + + HE HG+GP P+ + +R +
Sbjct: 368 NYVVIPMAQLVMDSVQATKVTAEGYLATTLMHEIAHGLGPAFARGPN-KLVDIREAIGAS 426
Query: 629 HSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQAL 688
+S +EEAKAD G+ L+++I +P++ Y++++A FR++RFG E+H + +
Sbjct: 427 YSGLEEAKADTAGMICLQWMIDHGYIPRTKSDEYYITYVADLFRAMRFGAGEAHSAAETM 486
Query: 689 QFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMT 748
+FN+L E+ A ++ +SVD K+ AV +L+ E+L I+A GD++ Y +
Sbjct: 487 EFNYLAEQGAIKRDANGRYSVDTGKIPAAVAALAKELLEIEATGDRDRCEKWFSHYGSFP 546
Query: 749 QPLKVALQKLENVQVPVDIAPTFTAVNKL 777
L +L +N VPVDI P F+ KL
Sbjct: 547 PELTKSLDAAKN--VPVDIDPVFSFPRKL 573
>gi|255543395|ref|XP_002512760.1| conserved hypothetical protein [Ricinus communis]
gi|223547771|gb|EEF49263.1| conserved hypothetical protein [Ricinus communis]
Length = 130
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 117/128 (91%)
Query: 651 RDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVD 710
++LLPKSLVKSMYVSFLAGCFRSVRFGLEE+HGKGQA+QFNWLFEKEAFILH D+TFSVD
Sbjct: 2 QNLLPKSLVKSMYVSFLAGCFRSVRFGLEEAHGKGQAVQFNWLFEKEAFILHPDETFSVD 61
Query: 711 FDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPT 770
F+KVE AVESLS EILTIQA+G+K AA+LLLQKYC MT+PLK+AL KLE VQVPVDI PT
Sbjct: 62 FEKVEEAVESLSREILTIQAKGEKAAANLLLQKYCKMTEPLKLALDKLEAVQVPVDIVPT 121
Query: 771 FTAVNKLL 778
F ++++
Sbjct: 122 FPIADEIV 129
>gi|224075736|ref|XP_002304743.1| predicted protein [Populus trichocarpa]
gi|222842175|gb|EEE79722.1| predicted protein [Populus trichocarpa]
Length = 118
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 106/116 (91%)
Query: 662 MYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESL 721
MYVSFLAGCFRSVRFGLEE+HGKGQALQFNW++EKEAFILH D+TFSVDF KVE AVESL
Sbjct: 1 MYVSFLAGCFRSVRFGLEEAHGKGQALQFNWMYEKEAFILHPDETFSVDFAKVEEAVESL 60
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKL 777
S EILTIQA+GDKEAA LLLQKYC MT+PLK AL+KLE+VQVPVDI P F+ VN++
Sbjct: 61 SREILTIQAKGDKEAADLLLQKYCKMTRPLKHALEKLESVQVPVDIYPIFSTVNEI 116
>gi|449532785|ref|XP_004173359.1| PREDICTED: nudix hydrolase 3-like, partial [Cucumis sativus]
Length = 134
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 106/126 (84%)
Query: 653 LLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFD 712
LLP + +KS+Y +FLAGCFRSVRFGL ++HGKGQALQFNWLFEKEAF+L+ D+TFSV+FD
Sbjct: 2 LLPGASLKSVYATFLAGCFRSVRFGLSKAHGKGQALQFNWLFEKEAFVLNPDETFSVNFD 61
Query: 713 KVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFT 772
KVE AVESLS E+LTIQARGDK++A L LQKY +++PLK+AL LE +QVPVD+A F
Sbjct: 62 KVEDAVESLSREVLTIQARGDKDSAKLFLQKYGVISEPLKLALHNLERIQVPVDLAAEFP 121
Query: 773 AVNKLL 778
++L
Sbjct: 122 IAKEIL 127
>gi|26450678|dbj|BAC42449.1| unknown protein [Arabidopsis thaliana]
Length = 114
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 94/109 (86%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EEH DVLT +G+KTG++KPR EVHR GDYHR V+ WIF E+TQ+LLLQ R+D KDSWPG
Sbjct: 3 EEHFDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQ 62
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116
WDISSAGHISAGD+SL+SAQREL+EELG+ LPKDAFE +F FLQ+ ++
Sbjct: 63 WDISSAGHISAGDTSLLSAQRELEEELGVKLPKDAFEKIFVFLQEWFVS 111
>gi|330794520|ref|XP_003285326.1| hypothetical protein DICPUDRAFT_46012 [Dictyostelium purpureum]
gi|325084690|gb|EGC38112.1| hypothetical protein DICPUDRAFT_46012 [Dictyostelium purpureum]
Length = 202
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 116/191 (60%), Gaps = 9/191 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E++DV G + G + PR+E+H+ G YHR V+ WI +S +L+Q+R KDS+P MW
Sbjct: 3 EYIDVCDEKGNQLGYSLPRAEIHQKGLYHRVVHVWI-VDSNGMVLIQKRTASKDSYPSMW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D S AGHI AG S +A +EL EELG+ ++ E +F+ LQ N++N+GKFI+NE +DV
Sbjct: 62 DKSCAGHIEAGMGSKETAVKELSEELGLLFSENRLELLFSTLQCNILNEGKFIDNEISDV 121
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP-YDV-------NGGY 180
YL+T P L+ LQ EVS K + ++ ++ DP+F P YD + Y
Sbjct: 122 YLITLGKPFDLQKLKLQVEEVSEAKLVNHQNLYEMIKNQDPTFTPLYDSHKYPNFNDAPY 181
Query: 181 GQLFNIISQRY 191
+ F I+++R+
Sbjct: 182 FKFFQILTERF 192
>gi|444912012|ref|ZP_21232179.1| Nudix hydrolase 3 [Cystobacter fuscus DSM 2262]
gi|444717379|gb|ELW58211.1| Nudix hydrolase 3 [Cystobacter fuscus DSM 2262]
Length = 609
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 209/449 (46%), Gaps = 31/449 (6%)
Query: 324 PKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL---SGHIV 380
P+ P N YPPD + E + + ++ E Q+E TV++R + NL L H V
Sbjct: 144 PQVPARNVYPPDATRAEVDAYLAAHPE-QRESLLGELTVVRRATTDNLRQDLKVLQAHPV 202
Query: 381 DATNH-----------SVGSIYDLYSVPYSEEYNSYLTRASELLHKAGD--MASSPSLKR 427
T H LY+VPY+ Y + + LL +A + AS L R
Sbjct: 203 LDTLHPGLRESLQVRAKQPDAKALYAVPYAVAYGPEMVKVYGLLMRAAEHVRASDEELAR 262
Query: 428 LLHSKADAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDK 486
L ++A LSN+Y D AW+ +L+V G YETY+DA++G KA + + + ++
Sbjct: 263 YLRNRARDMLSNDYESGDAAWVTGRFKKLNVHFGAYETYDDALYGVKAFYGVSVLLLNED 322
Query: 487 ATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPND 546
AT +++ LQ +E LP + ++ I P+ V +++ + G +G T LPND
Sbjct: 323 ATRELRKRLSGLQGVEDALPYTAKKQVREDI--PVGVYEVVADFGQARGTNTATI-LPND 379
Query: 547 ERIVKDRGTSMVMLKNVSEAK--FKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCH 604
+ G ++++ +N+ F R + ++L + F + HE H
Sbjct: 380 PLYSRRYGRTILLRENIMRNPELFAADERIWRTATVDAHAKDLTS-EGNFQRTLWHEVGH 438
Query: 605 GIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYV 664
+GP D + T+ + L++ AMEE K+D+V L+AL L + ++++
Sbjct: 439 YLGPDR----DAKGRTLDVALEDYADAMEEMKSDLVSLFALHAFNKSGSLDAASLRAVQA 494
Query: 665 SFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDT--FSVDFDKVEGAVESLS 722
S + ++VR ++ + + Q LQFNW F I T ++ +D+ V SL
Sbjct: 495 SGIRRTLQNVRPREDQPYQRMQLLQFNW-FLDHGLIRADPKTARLTIQYDRYVDTVGSLL 553
Query: 723 TEILTIQARGDKEAASLLLQKYCTMTQPL 751
E+L +Q GDK A + +++ T T L
Sbjct: 554 EEVLALQHAGDKAATAKFFERWSTWTPEL 582
>gi|328866129|gb|EGG14515.1| hypothetical protein DFA_12291 [Dictyostelium fasciculatum]
Length = 289
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 123/189 (65%), Gaps = 8/189 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E++DV+ G TG + PRSE+HR+G +H+ ++ W+ + ++L+Q+RA K+S+ MW
Sbjct: 14 EYIDVMNEDGTPTGTSLPRSEIHRLGIWHKVIHVWL-VDCNGDVLIQQRAANKESFASMW 72
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFAD 127
DIS AGHI AG +S SA +EL EEL ++L ++ E++FT ++ V+++GK+++NE AD
Sbjct: 73 DISCAGHIEAGMNSRDSAIKELSEELSVHLNNQEQLEYLFTSKKKFVLHNGKYLDNEIAD 132
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNG------GYG 181
VYL+T PI ++++ LQ EV VK I + E +++ + DP+FVP + Y
Sbjct: 133 VYLLTYDQPIDVKSYKLQVEEVQGVKLIKHSELRDMAERIDPTFVPLRLENQPFEECTYK 192
Query: 182 QLFNIISQR 190
QLF+ +R
Sbjct: 193 QLFDYSIKR 201
>gi|338534048|ref|YP_004667382.1| hypothetical protein LILAB_22025 [Myxococcus fulvus HW-1]
gi|337260144|gb|AEI66304.1| hypothetical protein LILAB_22025 [Myxococcus fulvus HW-1]
Length = 604
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 215/448 (47%), Gaps = 41/448 (9%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL----SGHIVDATNH 385
N YP D+ + E + + ++ ++ S TV++R + NL + + ++D +
Sbjct: 146 NVYPVDVTRAEVDAFLAA-NPGERAAVLSEKTVVRRATAANLRQDVKVLQTYPVLDTLHP 204
Query: 386 SVGSIYD----------LYSVPYSEEYNSYLTRASELLHKAGDM--ASSPSLKRLLHSKA 433
+ LY+VPY+ Y L +A L+ +A AS L R L ++A
Sbjct: 205 GLREALQAKAKRPDARVLYAVPYAVAYGPELVKAYGLVMRAARRLEASDVELARYLRNRA 264
Query: 434 DAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVK 492
LSN+Y D AW+ +L+V +G YETY+DA+FG KA + +R+++AT +++
Sbjct: 265 RDLLSNDYESGDAAWVTGRFQKLNVQLGAYETYDDALFGVKAFHSLSVLLRNEEATQELR 324
Query: 493 LFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKD 552
LQ +E LP + ++ I P+ V ++I + G +G T + LPND +
Sbjct: 325 KRLGGLQAVEDALPYAAKKRVREDI--PVGVYEVIADFGQSRGTNTASI-LPNDALTARR 381
Query: 553 RGTSMVMLKNVSE-----AKFKNILR-PIADVCIRKEQQELVDFDSFFTHNICHECCHGI 606
G ++++ +N+ A + I R +AD R ELV + F + HE H +
Sbjct: 382 YGRTILLRENIMRNPDLFASDERIWRAAVADAHAR----ELVS-EGNFQRTLWHEVGHYL 436
Query: 607 GPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSF 666
GP D + + L++ A+EE KAD+V L++L + L + ++++ S
Sbjct: 437 GPDR----DAKGRNLDDALEDYAGAVEEMKADLVSLFSLHAFHKKGTLDAAGLRAVQASG 492
Query: 667 LAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDT---FSVDFDKVEGAVESLST 723
+ ++VR ++ + + Q +QFNW E +L +D S+ +DK V +L
Sbjct: 493 IRRTLQNVRPREDQPYQRMQLVQFNWFLEHG--LLQADPKTARLSIQYDKYPAVVTALLE 550
Query: 724 EILTIQARGDKEAASLLLQKYCTMTQPL 751
++L +Q GDK A + Q++ T L
Sbjct: 551 KVLALQHGGDKAATAAFFQRWSAWTPEL 578
>gi|108758370|ref|YP_631061.1| hypothetical protein MXAN_2850 [Myxococcus xanthus DK 1622]
gi|108462250|gb|ABF87435.1| conserved domain protein [Myxococcus xanthus DK 1622]
Length = 617
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 208/444 (46%), Gaps = 33/444 (7%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSS---LSGHIVDATNH- 385
N YP D+ + E + + ++ +++ S TV++R + NL L H V T H
Sbjct: 159 NVYPVDVTRAEVDAFLAA-NPGERQSLLSEKTVVRRATAANLRQDVKVLQTHPVLDTLHP 217
Query: 386 ----------SVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDM--ASSPSLKRLLHSKA 433
LY+VPY+ Y L +A L+ +A AS L R L +A
Sbjct: 218 GLRQALQAKAKRPDAKALYAVPYAVAYGPELVKAYGLVMRAAQRLEASDVELARYLRYRA 277
Query: 434 DAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVK 492
L+N+Y D AW+ +L+V +G YETY+DA+FG KA + + ++ AT +++
Sbjct: 278 RDLLTNDYESGDAAWVTGRFQKLNVQLGAYETYDDALFGVKAFHSLSVLLSNEAATQELR 337
Query: 493 LFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKD 552
LQ +E LP + ++ I P+ V +I + G +G T + LPND +
Sbjct: 338 KRLGGLQAVEDALPYAAKKRVREDI--PVGVYDVIADFGQSRGTNTASI-LPNDALAARR 394
Query: 553 RGTSMVMLKNVSEAK--FKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHS 610
G ++++ +N+ F + R + +ELV + F + HE H +GP
Sbjct: 395 YGRTILLRENIMRNPDLFASDERIWRAAVVDAHARELVS-EGNFQRTLWHEVGHYLGPDR 453
Query: 611 ITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGC 670
D + T+ L++ A+EE KAD+V L++L + L + ++++ S +
Sbjct: 454 ----DQKGRTLDDALEDYAGAVEEMKADLVSLFSLHDFHKKGALDAAGLRAVQASGIRRT 509
Query: 671 FRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDD---TFSVDFDKVEGAVESLSTEILT 727
++VR ++ + + Q +QFNW E +L +D S+ +DK V SL ++L
Sbjct: 510 LQNVRPREDQPYQRMQLVQFNWFLEHG--LLQADPQTARLSIQYDKYPAVVTSLLEKVLA 567
Query: 728 IQARGDKEAASLLLQKYCTMTQPL 751
+Q GDK A + Q++ T L
Sbjct: 568 LQHGGDKAATAAFFQRWSAWTPEL 591
>gi|405354829|ref|ZP_11024174.1| hypothetical protein A176_0295 [Chondromyces apiculatus DSM 436]
gi|397092034|gb|EJJ22818.1| hypothetical protein A176_0295 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 621
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 211/443 (47%), Gaps = 41/443 (9%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSS---LSGHIVDATNH- 385
N YP D+ + E + + ++ + + E S TV++R + NL L H V T H
Sbjct: 163 NVYPVDVTRAEVDAFLAAHPDAR-EKLLSEKTVVRRATAANLRQDVKVLQAHPVLDTLHP 221
Query: 386 -------SVGSIYD---LYSVPYSEEYNSYLTRASELLHKAGD--MASSPSLKRLLHSKA 433
+ D LY+VPY+ Y L +A + +A D S L R L ++A
Sbjct: 222 GLRQSLQAQAKKPDAKVLYAVPYAVAYGPELVKAYGHIMRAADRLAPSDAELARYLRNRA 281
Query: 434 DAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVK 492
LSN+Y D AW+ +L+V +G YETY+DA++G KA + + ++ AT +++
Sbjct: 282 RDLLSNDYESGDAAWVTGRFQKLNVQLGAYETYDDALYGVKAFHSLSVLLSNEPATQELR 341
Query: 493 LFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKD 552
LQ +E LP + ++ I P+ V +I + G +G T + LPND +
Sbjct: 342 KRLGGLQAVEDALPYAAKKRVREDI--PVGVYDVIADFGQSRGTNTASI-LPNDPLAARR 398
Query: 553 RGTSMVMLKNVSE-----AKFKNILR-PIADVCIRKEQQELVDFDSFFTHNICHECCHGI 606
G ++++ +N+ A + I R +AD QELV + F + HE H +
Sbjct: 399 YGRTILLRENIMRNPELFASDERIWRAAVADA----HAQELVP-EGNFQRTLWHEVGHYL 453
Query: 607 GPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSF 666
GP D + ++ + L++ AMEE KAD+V L++L + L + ++++ S
Sbjct: 454 GPDR----DQKGRSLDVALEDYAGAMEEMKADLVSLFSLHDFHKKGTLDAAGLRAVQASG 509
Query: 667 LAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDD---TFSVDFDKVEGAVESLST 723
+ ++VR ++ + + Q +QFNW E ++ +D S+ +DK V L
Sbjct: 510 IRRTLQNVRPREDQPYQRMQLVQFNWFLEHG--LIQADPQTARLSIHYDKYPAVVTKLLE 567
Query: 724 EILTIQARGDKEAASLLLQKYCT 746
++L +Q GDK A + Q++
Sbjct: 568 QVLALQHGGDKAATAAFFQRWSA 590
>gi|449532787|ref|XP_004173360.1| PREDICTED: nudix hydrolase 3-like, partial [Cucumis sativus]
Length = 86
Score = 139 bits (350), Expect = 6e-30, Method: Composition-based stats.
Identities = 66/86 (76%), Positives = 72/86 (83%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MAE QEEH DVLT TG+KTG +K R +VHR GDYHR V+ WIFAESTQELLLQ RAD
Sbjct: 1 MAEPRKQEEHFDVLTKTGEKTGFSKSRCDVHRDGDYHRAVHVWIFAESTQELLLQLRADC 60
Query: 61 KDSWPGMWDISSAGHISAGDSSLISA 86
KDSWPG+WDISSAGHISAGDSSL +A
Sbjct: 61 KDSWPGLWDISSAGHISAGDSSLETA 86
>gi|66825841|ref|XP_646275.1| hypothetical protein DDB_G0269784 [Dictyostelium discoideum AX4]
gi|60474305|gb|EAL72242.1| hypothetical protein DDB_G0269784 [Dictyostelium discoideum AX4]
Length = 201
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E++DV G G + PRSE+H G +HR V+ WI +S +L+Q+RA K+S P MW
Sbjct: 3 EYIDVCNEDGTSAGYSAPRSEIHEKGLWHRVVHIWI-VDSNGMVLIQKRAAHKESNPSMW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DIS AGHI AG +S +A +EL EELG+ ++ E +F++ +++++N+GK+++ E DV
Sbjct: 62 DISCAGHIEAGMNSKETAIKELFEELGLLYSQNDLELLFSYNKKSILNNGKYLDFEIPDV 121
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP-YDVNGG------YG 181
YL+T +P+ L LQ EVS K + E L+ +++ +F P YD + Y
Sbjct: 122 YLITLAHPLNLGTLNLQIEEVSDAKLVTPNELYQLITEENSTFAPLYDADDKPFKAHPYF 181
Query: 182 QLFNIISQRYKENT 195
+LF +++++ T
Sbjct: 182 KLFETLAEKFPTPT 195
>gi|440799607|gb|ELR20651.1| hydrolase, NUDIX domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 192
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
EE L+V T G+ TG K R +H G +H+ V+ W +T+ +LLQRR+ K + P
Sbjct: 6 HEELLEVWTQDGRPTGEIKTRKVIHEQGLWHKIVHVWCVDPATRRVLLQRRSADKCTNPD 65
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
WDIS AGHI AG++SL A +EL EELGI + +F+FT V +G + +NE
Sbjct: 66 KWDISCAGHIEAGETSLQGALKELHEELGITAQPEKLQFLFTAPASGVYMNGTYFDNELQ 125
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
D+YL T + + + LQ EV+ K++ ++E++ L D S V + G YG LF +
Sbjct: 126 DIYLYET--DVSVSSLVLQPEEVTDAKWVGWDEFEAQLDSGDESLVAVE-KGEYGPLFAL 182
Query: 187 ISQRY 191
+ +RY
Sbjct: 183 LRERY 187
>gi|413924241|gb|AFW64173.1| hypothetical protein ZEAMMB73_296869 [Zea mays]
Length = 85
Score = 132 bits (333), Expect = 5e-28, Method: Composition-based stats.
Identities = 61/80 (76%), Positives = 67/80 (83%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE LDVL G K G++KPRSEVHR GDYHR V+ WI++EST ELLLQRRAD KDSWPG
Sbjct: 6 EERLDVLNAAGDKIGVSKPRSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDSWPGQ 65
Query: 68 WDISSAGHISAGDSSLISAQ 87
WDISSAGHISAG+SSL SAQ
Sbjct: 66 WDISSAGHISAGESSLFSAQ 85
>gi|298248850|ref|ZP_06972655.1| NUDIX hydrolase [Ktedonobacter racemifer DSM 44963]
gi|297551509|gb|EFH85375.1| NUDIX hydrolase [Ktedonobacter racemifer DSM 44963]
Length = 192
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
Query: 11 LDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDI 70
+DVL+ +G +TG PR+E+HR+G YHR V+ ++ S +E+LLQRRA D +PG + I
Sbjct: 5 IDVLSASGLRTGEILPRAEIHRLGKYHRAVHLYLL-NSNKEVLLQRRALTVDHFPGFFGI 63
Query: 71 SSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
S GH+ AG+ S +RE++EELGI + F+F+F+F Q+ ++N+ +I+ +F DVY+
Sbjct: 64 SVTGHVRAGECSSDCVRREVEEELGIKSSQLQFDFLFSFFQEAILNE-TYIDRQFHDVYV 122
Query: 131 VTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
T I E+ ++EVS VK++ +E ++ + + P
Sbjct: 123 --TRADIQPESIQFDRSEVSEVKFVPFERFRAMALGESADLAP 163
>gi|302339585|ref|YP_003804791.1| hypothetical protein Spirs_3097 [Spirochaeta smaragdinae DSM 11293]
gi|301636770|gb|ADK82197.1| hypothetical protein Spirs_3097 [Spirochaeta smaragdinae DSM 11293]
Length = 587
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 229/538 (42%), Gaps = 45/538 (8%)
Query: 221 LSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLR---DWLKEHADASELDKLKWMYYLI 277
LS ++ E L + AA M+E+F Q ++ D + +A+ E + L +L+
Sbjct: 34 LSSSEAELLHYLCLAAEEMNEVFCWQFCPDTSIILHFLDTITPYANEHEGESLSAYRHLL 93
Query: 278 --NKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPD 335
+PWS L + VK L + + + + +P P +FYPPD
Sbjct: 94 LLQNAPWSLQPRKNHLLEIEEERVKALAELAGSLEAFLHIRRYLFDLVPVPGRCSFYPPD 153
Query: 336 MDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYS 395
+ E E S E + V+ R ++ +D+
Sbjct: 154 LTDEELESLGSPAGEVNR--------VLFRGNDGGVDT---------------------- 183
Query: 396 VPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIA---WIELD 452
+ + + RA++ L KA +++ + S K L +K + + +A WI D
Sbjct: 184 IRNEQLFPEACGRAADYLRKAWELSDNISFKLYLDAKITELETGSLEARRVADYLWIRHD 243
Query: 453 SELDVTIG-PYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 511
S +D+ I E Y DA K A + D K+ +K + LE P
Sbjct: 244 SPIDIVISTALEVYLDAWKNNKGAACAAVTRIDTKSDRLIKDLLGLVPELEATAPWKWKR 303
Query: 512 KSKDVIAAP-IRVIQLIYNSGD-VKGPQTV-AFNLPNDERIVKDRGTSMVMLKNVSEAKF 568
DV P ++ + ++ SGD V GP TV A +LPNDE I K+ GT ++ +N A
Sbjct: 304 SEIDVHCLPRLKFVDVLLWSGDYVTGPMTVGAQSLPNDEWIGKNIGTVNMVYQNTGRAVH 363
Query: 569 KNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD-GRQSTVRLELQE 627
+AD + +E ++V S F H H IG H+ L D Q + L
Sbjct: 364 SLSGSILADQFLPREILDIVG-KSLFEGGQLHSALHEIG-HTTGLQDPDHQGEASVWLGG 421
Query: 628 LHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQA 687
+S EE +A++ G+WA + + ++ + L + + + L RS+ F +++H +
Sbjct: 422 EYSTFEELRAELFGMWACEKAVAASVIDRPLADAAHYAMLLTMLRSLAFVPDQAHTNARN 481
Query: 688 LQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
+ F++ EK A + ++ F DF + AVE L E+ I+A G+ AA L +++C
Sbjct: 482 IMFHYFEEKRAIVSTTEGRFRYDFALLHPAVERLLAEVADIKASGNLSAAKGLKERFC 539
>gi|406982307|gb|EKE03643.1| hypothetical protein ACD_20C00173G0002 [uncultured bacterium]
Length = 637
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 247/585 (42%), Gaps = 94/585 (16%)
Query: 217 ELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYL 276
E L + DK+AL +IKAA MD +FY Q N ++ L++ A + + + + +
Sbjct: 92 EFKVLKEGDKKALGHLIKAAMAMDNVFYKQDDPKNLEMKAALEKAAKSGDKNAQQTLKIF 151
Query: 277 INKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDM 336
+ +L P+ PV +KGLE KP G FYP D+
Sbjct: 152 -------------NIFKGVEGDDRLSPE---PVKLFKGLE--------KPEGKGFYPSDL 187
Query: 337 DKMEF-ELWKSSLTEKQQEDATSFF---TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYD 392
K EF + K LTE + ++ T++ R + D
Sbjct: 188 KKEEFVSIIKRMLTEDKDKEVAKILSQRTIVVRDGD-----------------------D 224
Query: 393 LYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY---YDSDIAWI 449
L V Y++EY + A++ L +A + +K L +A+A + Y +D +W+
Sbjct: 225 LKGVDYTQEYQKEFSEAAKHLEEASKTVTHDGMKEYLQLQAEALRKEDAELDYKADSSWV 284
Query: 450 EL-DSELDVTIGPYETYEDAIFG--------------------YKATFEAFIGIRDDKAT 488
+L DS L+ TI E+Y+D + G K + +GI D + T
Sbjct: 285 KLQDSPLEFTIS-RESYDDKLTGAVLEDEELSQMLKERDIQANTKDSIGIRVGITDMETT 343
Query: 489 AQVKLFGDNLQVLEQNLPMDNAYK----SKDVIAAPIRVIQLIY---NSGDVKGPQTVAF 541
+ + +++ L + +P + Y S + I I ++L+ + G V+G A
Sbjct: 344 KGIIDYKKHIKNLAKLMPYSDQYTQSVDSGEEIKQSIVDVKLLCLKGHYGAVRGGIVAAQ 403
Query: 542 NLPNDERIVKDRGTSMVMLKNVSEAKFKNIL-RPIADVCIRKEQQELVDFDSFFTHNICH 600
NLPND+++ RG+ + + F+N L R + + I Q +L D + H + H
Sbjct: 404 NLPNDDKLAVQRGSGRRNVFHQQILNFENPLRRKLLETVINPSQWDLYDIKASNNHIVGH 463
Query: 601 ECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK 660
E H +GP + + L S +EEAKAD+ + + ++ K+
Sbjct: 464 ELTHSLGPG---------NEYKSALGNYGSIIEEAKADLGASTFTDYFLEKEKYTKTDKD 514
Query: 661 SMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDT-FSVDFDKVEGAVE 719
+ +++ + GL +++G + + N+L ++ A + D T SVD DK + A
Sbjct: 515 KVLFNWVFDNLPISKPGLNDTYGIMRLMTLNYLRDQGAITMKQDGTNISVDTDKTQKASA 574
Query: 720 SLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVP 764
+ +I+ IQ D + A ++K+ ++ + ++++ P
Sbjct: 575 QMLDDIVAIQLDKDPDKAKTYIEKWSKWDDTMETLSKTVKDIVKP 619
>gi|325104169|ref|YP_004273823.1| Dipeptidyl-peptidase III [Pedobacter saltans DSM 12145]
gi|324973017|gb|ADY52001.1| Dipeptidyl-peptidase III [Pedobacter saltans DSM 12145]
Length = 685
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 190/394 (48%), Gaps = 41/394 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSP----SLKRLLHSKADAFLSNNYYDSDIAWI-ELDSELD 456
Y + L + L KA ++ + +LK+L+H L + + D IAW+ + S LD
Sbjct: 252 YGAALEKVVYWLQKAVEVTETDQQRLALKKLIHYYQTGDLKD-FDDYSIAWVADTASHLD 310
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
V G E Y DAI G K TFE+ + ++D++AT ++KL D Q E N P+ ++K K+V
Sbjct: 311 VINGFIEVYNDAI-GKKGTFESVVSMKDEEATKRIKLISDQAQWFEDNSPLMPSHKKKNV 369
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIA 576
RVI +I SGD + NLPN + I +D G+ V L N+ + N++ +
Sbjct: 370 KGITARVITVIQESGDSSPSTPIGINLPNSDWIRRDYGSKSVSLSNIVHS--YNVMSNTS 427
Query: 577 DVC--------IRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQEL 628
+ ++K +E + S H HEC IG S + G ++ + L+
Sbjct: 428 GMLDEFAYGDEVKKRIREYGNLSSDL-HTDMHEC---IGHASGQINPGVETPDKT-LKTY 482
Query: 629 HSAMEEAKADIVGLWAL--KFLIGRDLLPKSLV-KSMYVSFLAGCFRS----VRFG--LE 679
S +EEA+AD+V L+ + + L+ ++P V K+ Y S++ S ++ G LE
Sbjct: 483 ASTLEEARADLVALYYIMDQKLVDIGVMPSLEVGKAEYDSYIMNGLISQLTRIKPGHNLE 542
Query: 680 ESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQAR 731
E+H + + L W++EK F+ + T++ D+ K+ L EI I++
Sbjct: 543 EAHMRNRQLNAMWVYEKGKKDNVIEFVKRNGKTYTKINDYQKLRVLFGELLREIQRIKSE 602
Query: 732 GDKEAASLLLQKYCTMTQP--LKVALQKLENVQV 763
GD AA L++ Y LK L++ + V
Sbjct: 603 GDYAAAKNLVETYGVKVDQNLLKEVLERFAKLNV 636
>gi|281211705|gb|EFA85867.1| hypothetical protein PPL_01099 [Polysphondylium pallidum PN500]
Length = 182
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 102/166 (61%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E++DV+ G G + PRSE+H G +HR V+ W+ ++ LL+Q+R+ K+S+ W
Sbjct: 3 EYIDVINEDGSPAGYSLPRSEIHSKGMWHRVVHVWL-VDTEGNLLIQQRSANKESFASYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDA-FEFVFTFLQQNVINDGKFINNEFAD 127
DIS AGHI AG +S+ +A +EL EELG+++ + E++FT+ NE AD
Sbjct: 62 DISCAGHIEAGMNSIDTAIKELDEELGLHITDASKLEYLFTY-------------NELAD 108
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
VYL T + L F LQ+ EV A+K++ Y + +++++DP+FVP
Sbjct: 109 VYLYTFSKHMELSEFKLQEEEVQALKWLHYTKLFEMVSRNDPTFVP 154
>gi|115377615|ref|ZP_01464811.1| putative orphan protein [Stigmatella aurantiaca DW4/3-1]
gi|310822755|ref|YP_003955113.1| hypothetical protein STAUR_5516 [Stigmatella aurantiaca DW4/3-1]
gi|115365366|gb|EAU64405.1| putative orphan protein [Stigmatella aurantiaca DW4/3-1]
gi|309395827|gb|ADO73286.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 586
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 199/446 (44%), Gaps = 38/446 (8%)
Query: 324 PKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFF---TVIKRRSEFNLD---SSLSG 377
P PG N YP + K + + ++ EK + S TV++R +L +L
Sbjct: 123 PVVPGKNVYPWGITKTQVQ----AVLEKHPDLQASLLAPRTVVRRADAASLRQDLGTLER 178
Query: 378 HIVDATNH--------SVGSIYD---LYSVPYSEEYNSYLTRASELLHKAGDMASS--PS 424
H V + H ++ D LY++PYS Y + +A LL +A +
Sbjct: 179 HPVISGLHPGLSEQLRALAKKPDPALLYALPYSVAYAPQMMKAHGLLWEAANAVEGDDAE 238
Query: 425 LKRLLHSKADAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIR 483
L ++A LS++Y D +W+ L+ IG YE Y+D +FG K + + +R
Sbjct: 239 FAGYLRNRARDLLSDDYESGDASWVRGRFRRLNAQIGSYEVYDDELFGAKTFYSLSVLLR 298
Query: 484 DDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAA--PIRVIQLIYNSGDVKGPQTVAF 541
DD ATA+++ LQ LE +LP Y +++ P+ V +I + + T
Sbjct: 299 DDAATAKLEKGLQGLQALEDSLP----YGPHKTVSSDIPVGVYNVIADFAQARSTNTATI 354
Query: 542 NLPNDERIVKDRGTSMVMLKNV-SEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICH 600
LPND + G ++++ N+ + + R + + + + + + F + H
Sbjct: 355 -LPNDPLHARRYGRTILLRSNIMTHPNLFSNGRTLWESVVAEPFRSHLGPSGGFNRTLWH 413
Query: 601 ECCHGIGPHSITLPDGRQSTVRLE-LQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV 659
E H +G D + +V + L+E SA+EE K+D+V L+ K L R + +
Sbjct: 414 EVGHYLGVDR----DVKGRSVNSDALEENSSALEEMKSDLVSLYIGKQLRERGFYDDTTL 469
Query: 660 KSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVE 719
+ +Y S + + VR ++ + Q +Q N+ ++ L D + ++K V
Sbjct: 470 RELYASGILRVLQVVRPRRDQPYQTMQLMQLNYFLDQGLLELRPDG-LHIHYEKYPETVG 528
Query: 720 SLSTEILTIQARGDKEAASLLLQKYC 745
+L E+L IQ GDK A+ ++KY
Sbjct: 529 NLLREVLAIQRAGDKPASDRFIEKYT 554
>gi|147773403|emb|CAN73438.1| hypothetical protein VITISV_040987 [Vitis vinifera]
Length = 228
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTMERSLTLQKQ 205
++EVSAVKYI+ EEYK LLAK+DP +VPYDVNG YGQLF+II+QRYKEN ERSLTLQKQ
Sbjct: 25 ESEVSAVKYISCEEYKRLLAKEDPEYVPYDVNGKYGQLFDIIAQRYKENMEERSLTLQKQ 84
Query: 206 LRRYAHVSLNAELAGL 221
LRRY +SL AE++ +
Sbjct: 85 LRRYVPISLEAEISSV 100
>gi|408411325|ref|ZP_11182490.1| NUDIX hydrolase [Lactobacillus sp. 66c]
gi|407874513|emb|CCK84296.1| NUDIX hydrolase [Lactobacillus sp. 66c]
Length = 185
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 8/170 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF----AESTQELLLQRRADFKDSW 64
E LDV+ TG+ G T R E HR G +HRT + WI ES E+LLQ+R+D KDS+
Sbjct: 2 EILDVVDETGKPLGRTVEREEAHRDGVWHRTASVWIVRKSNTESGWEVLLQKRSDIKDSY 61
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFIN 122
PG +D SSAGHI AGD L + REL EELGI+ F F+ TF V + +F N
Sbjct: 62 PGCYDTSSAGHIDAGDEPLETIIRELGEELGIHAAPGDFTFIGTFHNNYDEVFHGSEFHN 121
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
E A V++ P+ + LQ+ EVS V + ++ +DP+F
Sbjct: 122 REVAFVHVYD--KPVDIADLVLQEEEVSGVAWFDLDDVWKKATSNDPAFC 169
>gi|402494238|ref|ZP_10840982.1| MutT (Nudix) family hydrolase [Aquimarina agarilytica ZC1]
Length = 187
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+LT G TG K +SE H+ G +H +V WI+ + +L+Q+RA KD++P +
Sbjct: 3 DELIDILTPNGTLTGEVKLKSEAHKKGLWHASVQIWIYTPDGK-ILIQKRAKNKDTYPNL 61
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDIS AGH++AGDS + +A RE++EE+G + KD F+ T + ++ I+NEF
Sbjct: 62 WDISVAGHLTAGDSPIDAAIREIEEEIGYRVFKDNLIFLKTIKKSKQVSSS-IIDNEFNY 120
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
+Y+V PI + LQ EV+ V I+ +++N L FVP+ Y + N I
Sbjct: 121 LYIVKL--PIIISKLKLQIEEVAEVTLISISDFENQLKNHPNIFVPHGA-SYYNFIINTI 177
Query: 188 SQR 190
Q+
Sbjct: 178 KQK 180
>gi|225376374|ref|ZP_03753595.1| hypothetical protein ROSEINA2194_02015 [Roseburia inulinivorans DSM
16841]
gi|225211750|gb|EEG94104.1| hypothetical protein ROSEINA2194_02015 [Roseburia inulinivorans DSM
16841]
Length = 339
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 7/162 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE---STQELLLQRRADFKDSWP 65
E D+L G KTG+ K R HR G H TV+ WI E S ++LLQ+R+D KDS+P
Sbjct: 157 ELFDILNEDGSKTGVVKERGVAHREGALHGTVHIWIVRENDKSGYDVLLQKRSDNKDSYP 216
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFE-FVFTFLQQNVINDGK-FINN 123
G +DISSAGHISAGD + SA RE +EELG++ + E F T ++ GK F +N
Sbjct: 217 GCYDISSAGHISAGDGVMESALREFEEELGLSAQPEQLELFGTTLVKFGTTFAGKIFRDN 276
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165
EF++ ++ P+ + LQ++EV+ V ++ YEE + +A
Sbjct: 277 EFSNDFVYR--QPVDIGKLKLQESEVAEVCWMDYEECREKIA 316
>gi|326790393|ref|YP_004308214.1| NUDIX hydrolase [Clostridium lentocellum DSM 5427]
gi|326541157|gb|ADZ83016.1| NUDIX hydrolase [Clostridium lentocellum DSM 5427]
Length = 180
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 66/155 (42%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWP 65
E LD++ G+ TGI K RS+VH GD HRT + WI ++ + ++LLQ+R+ KDS P
Sbjct: 2 EMLDIVDENGEPTGIIKERSKVHAEGDLHRTSHVWIVRDNGKGGLDVLLQKRSKDKDSHP 61
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQQNVINDGKFINN 123
G +DISSAGHI AG + + SA REL+EELGI + E + + N+ FI+N
Sbjct: 62 GCYDISSAGHIPAGSTYVDSALRELEEELGIKASSEELEERMIRRIAETNIFYGKAFIDN 121
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 158
+ VY + N I L LQQ E+ AV ++ YE
Sbjct: 122 QITRVYRLKR-NDIDLSKLKLQQEEIEAVMWMDYE 155
>gi|116513992|ref|YP_812898.1| NUDIX family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116093307|gb|ABJ58460.1| NUDIX family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 183
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ GQ TG T R+E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGQPTGQTIERNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+AGD L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAGDEPLATIIRELEEELGIKSQDADFTFIGTFHNCYDEVFHQAEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQKEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|409349485|ref|ZP_11232926.1| NUDIX hydrolase [Lactobacillus equicursoris CIP 110162]
gi|407878114|emb|CCK84984.1| NUDIX hydrolase [Lactobacillus equicursoris CIP 110162]
Length = 185
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 93/170 (54%), Gaps = 8/170 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF----AESTQELLLQRRADFKDSW 64
E LDV+ TG+ G T R E HR G +HRT + WI ES E+LLQ+R+D KDS+
Sbjct: 2 EILDVVDETGKPLGRTVEREEAHRDGVWHRTASVWIVRKSNTESDWEVLLQKRSDIKDSY 61
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFIN 122
PG +D SSAGHI AGD L + REL EELGI+ F F+ TF V + +F N
Sbjct: 62 PGCYDTSSAGHIDAGDEPLETIIRELGEELGIHAAPGDFTFIGTFHNNYDEVFHGSEFHN 121
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
E A V++ P+ + LQ+ EVS V + ++ +D +F
Sbjct: 122 REVAFVHVYD--KPVDIADLVLQEEEVSGVAWFDLDDVWKKATSNDSAFC 169
>gi|300813022|ref|ZP_07093405.1| hydrolase, NUDIX family [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300495992|gb|EFK31131.1| hydrolase, NUDIX family [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 183
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T R+E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGRPTGQTIERNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+AGD L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAGDEPLATIIRELEEELGIKSQAADFTFIGTFHNCYDKVFHQAEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQEEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|385815644|ref|YP_005852035.1| NUDIX hydrolase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325125681|gb|ADY85011.1| NUDIX hydrolase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 183
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T R+E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGRPTGQTIERNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+AGD L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAGDEPLATIIRELEEELGIKSQAADFTFIGTFHNCYDEVFHQAEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQEEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|291549122|emb|CBL25384.1| Isopentenyldiphosphate isomerase [Ruminococcus torques L2-14]
Length = 339
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDSWP 65
E DV+ G KTG K R HR G H TV+ WI ES ++LLQ+R++ KDS P
Sbjct: 157 ELFDVIDEDGNKTGQVKERGVAHRDGTLHATVHIWIVRPNQESGYDVLLQKRSECKDSNP 216
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINN 123
G +DISSAGH+SAGD + SA RE++EELGI+ +D +F+ T Q + F +N
Sbjct: 217 GAYDISSAGHVSAGDELMESALREMEEELGIHAREDQLQFIGTHRGQFEAEFHGKPFRDN 276
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
E + VYL P+ ++ LQ++EV V ++ +EE +
Sbjct: 277 ERSTVYLYR--EPVDIKNLKLQESEVEEVIWMDFEECR 312
>gi|104773982|ref|YP_618962.1| hypothetical protein Ldb0969 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|418034857|ref|ZP_12673324.1| Hydrolase acting on acid anhydrides [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103423063|emb|CAI97771.1| Hypothetical protein Ldb0969 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|354691696|gb|EHE91611.1| Hydrolase acting on acid anhydrides [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 183
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T R+E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGRPTGQTIERNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+AGD L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAGDEPLATIIRELEEELGIKSQAADFTFIGTFHNCYDEVFHQTEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQKEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|418029617|ref|ZP_12668152.1| Hydrolase acting on acid anhydrides [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354689618|gb|EHE89601.1| Hydrolase acting on acid anhydrides [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 180
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T R+E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGRPTGQTIERNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+AGD L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAGDEPLATIIRELEEELGIKSQAADFTFIGTFHNCYDEVFHQTEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQKEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|389578149|ref|ZP_10168177.1| isopentenyldiphosphate isomerase [Eubacterium cellulosolvens 6]
gi|389313634|gb|EIM58567.1| isopentenyldiphosphate isomerase [Eubacterium cellulosolvens 6]
Length = 192
Score = 111 bits (278), Expect = 1e-21, Method: Composition-based stats.
Identities = 74/172 (43%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWI---FAESTQELLLQRRADFKD 62
++EE LD++ GQ TG + PRS+ H G HRT + W+ F + ++LLQ+RA KD
Sbjct: 1 MEEERLDIVDEKGQPTGASVPRSKAHAEGIRHRTAHIWVVRRFGDKV-DVLLQKRALSKD 59
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF-LQQNVINDGK-F 120
S+PG +D SSAGHI AGD L SA REL EELGI D FV TF +Q GK F
Sbjct: 60 SFPGCYDTSSAGHIQAGDEPLESAARELSEELGIQADPDDIHFVGTFPIQYEKEFHGKMF 119
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE-YKNLLAKDDPSF 171
+ E A VY+ I ++ T+Q+ E+ V++ EE YK L D F
Sbjct: 120 KDQEIAFVYVYD--KEISVDDLTIQKEELDGVEWFDLEEVYKACLPPRDEKF 169
>gi|363582333|ref|ZP_09315143.1| NUDIX hydrolase [Flavobacteriaceae bacterium HQM9]
Length = 184
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L TG TG K +S H+ G +H + WI+ + Q +L+Q+RA KD++P +
Sbjct: 3 DELIDILDATGSLTGEIKLKSIAHKHGLWHASAQIWIYTPTGQ-VLIQKRAINKDTYPNL 61
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDIS AGH+SAGD+ +A RE+QEE+G+ + ++ F+ T + N I++ I+NEF
Sbjct: 62 WDISVAGHLSAGDTPSTAAVREIQEEIGVKISEEKLFFLKTIRKSNRISN-TIIDNEFNH 120
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+Y++ + + LQ EV+AVK I + + L SFVP+
Sbjct: 121 LYVLEF--AVNINELKLQTEEVTAVKLIDINDLEKQLKIVPASFVPH 165
>gi|336422232|ref|ZP_08602384.1| hypothetical protein HMPREF0993_01761 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009142|gb|EGN39140.1| hypothetical protein HMPREF0993_01761 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 341
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE---STQELLLQRRADFKDSWP 65
E D+L G KTGI + R HR G H T + W+ + S ++LLQ+R+ KDS P
Sbjct: 156 ELFDILNPDGSKTGIVRERGVAHREGSLHATAHIWVVRKNLKSGYDVLLQKRSACKDSNP 215
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ--QNVINDGKFINN 123
G +DISSAGH+++GD+ + SA RE++EELGI ++ +V ++V F +N
Sbjct: 216 GCYDISSAGHVTSGDTVIESAIREMKEELGITASEEELHYVGVHHGAFEDVFYGRMFRDN 275
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
E + VY+ + P+ +E TLQ++EV V ++ YEE
Sbjct: 276 ELSSVYVY--IEPVDIEELTLQESEVEEVIWMDYEE 309
>gi|345867273|ref|ZP_08819288.1| NUDIX domain protein [Bizionia argentinensis JUB59]
gi|344048316|gb|EGV43925.1| NUDIX domain protein [Bizionia argentinensis JUB59]
Length = 183
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 5/184 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
++EE +D+++ TG+ TG T +SE+HR G YH T + W + E + LL QR A K +P
Sbjct: 1 MEEEIIDIVSKTGKPTGKTALKSEIHRKGYYHNTAHIWFYTEDGKILLAQRAAS-KAIYP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
+WD+S AGH+ AG++ +A RE QEE+ + +P+ + + F + G I+NEF
Sbjct: 60 LLWDVSVAGHVDAGETIEQAAIRETQEEISLKIPECDLQKIGFFPCFRSYDSG-IIDNEF 118
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQ-LF 184
Y+ +PL+ Q EV A+K + +E++K+LLA + + N GY + +
Sbjct: 119 HHTYIAKL--QVPLKNLKPQPGEVEALKLVTFEKFKSLLANSESNSYFVASNRGYYEFVL 176
Query: 185 NIIS 188
N+I+
Sbjct: 177 NVIT 180
>gi|422843644|ref|ZP_16890354.1| hypothetical protein HMPREF5505_0019 [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|325686270|gb|EGD28311.1| hypothetical protein HMPREF5505_0019 [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 183
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T R+E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGRATGQTIERNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+A D L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAVDEPLATIIRELEEELGIKSQAADFTFIGTFHNCYDKVFHQAEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQEEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|313123620|ref|YP_004033879.1| nudix family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280183|gb|ADQ60902.1| NUDIX family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 183
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T +E HR+G +HR + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 EILDIVDKEGRPTGQTIEWNEAHRIGAWHRCASVWIIRQKAGKWQVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINNE 124
+D SSAGHI+AGD L + REL+EELGI F F+ TF V + +F N E
Sbjct: 62 CFDTSSAGHIAAGDEPLATIIRELEEELGIKSQAADFTFIGTFHNCYDKVFHQAEFKNRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ V++ + P+ LQ+ EVSAV + +E DP F
Sbjct: 122 VSFVHVYS--KPVDENKLVLQEEEVSAVAWFDLDEVWEKAQAKDPDFC 167
>gi|167758003|ref|ZP_02430130.1| hypothetical protein CLOSCI_00340 [Clostridium scindens ATCC 35704]
gi|167664435|gb|EDS08565.1| hydrolase, NUDIX family [Clostridium scindens ATCC 35704]
Length = 371
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE---STQELLLQRRADFKDSWP 65
E D+L G KTGI + R HR G H T + W+ + S ++LLQ+R+ KDS P
Sbjct: 186 ELFDILNPDGSKTGIVRERGVAHREGSLHATAHIWVVRKNLKSGYDVLLQKRSACKDSNP 245
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ--QNVINDGKFINN 123
G +DISSAGH+++GD+ + SA RE++EELGI ++ +V ++V F +N
Sbjct: 246 GCYDISSAGHVTSGDTVIESAIREMKEELGITASEEELHYVGVHHGAFEDVFYGRMFRDN 305
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
E + VY+ + P+ +E TLQ++EV V ++ YEE
Sbjct: 306 ELSSVYVY--IEPVDIEELTLQESEVEEVIWMDYEE 339
>gi|160941728|ref|ZP_02089055.1| hypothetical protein CLOBOL_06624 [Clostridium bolteae ATCC
BAA-613]
gi|158435225|gb|EDP12992.1| hypothetical protein CLOBOL_06624 [Clostridium bolteae ATCC
BAA-613]
Length = 344
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 10/164 (6%)
Query: 1 MAESVV---QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLL 54
++E+V+ Q E DVL G+KTG+ + RS VH G HRT + W+ + T +LLL
Sbjct: 148 LSEAVLNGKQLELFDVLDADGKKTGVVRERSLVHMDGVPHRTAHIWVVRKNKDKTYDLLL 207
Query: 55 QRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV--FTFLQQ 112
Q+R+ KDS+PG +DISSAGH+ AGD L SA REL+EELGI ++ EF +
Sbjct: 208 QKRSRGKDSYPGCYDISSAGHVQAGDEFLPSAIRELKEELGIEAGEEDLEFAGYHKGYME 267
Query: 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
V F ++E + VY+ + P+ + TLQ+ EV +V ++
Sbjct: 268 EVFYGRMFRDSEVSAVYVYS--KPVDADRLTLQKEEVESVMWMG 309
>gi|166030563|ref|ZP_02233392.1| hypothetical protein DORFOR_00226 [Dorea formicigenerans ATCC
27755]
gi|166029565|gb|EDR48322.1| hydrolase, NUDIX family [Dorea formicigenerans ATCC 27755]
Length = 343
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDSWP 65
E D+L G KTGI + R HR G H TV+ WI +S ++LLQ+R+ KDS P
Sbjct: 157 ELFDILNPDGSKTGIVRERVVAHREGSLHATVHMWIVRPNEKSGYDVLLQKRSQTKDSNP 216
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ--QNVINDGKFINN 123
G +DISSAGH+ AGD L SA REL+EELGI + ++ + F +
Sbjct: 217 GSYDISSAGHVDAGDEILESAIRELKEELGIEAKPEELHYIGVHYGAFEAEFYGKMFRDR 276
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162
E + VY+ T P+ +E LQ+ EV AV+++ YEE +
Sbjct: 277 ELSSVYVYT--EPVEIENLKLQKEEVEAVRWMDYEECRQ 313
>gi|315925180|ref|ZP_07921396.1| mutator MutT protein [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621551|gb|EFV01516.1| mutator MutT protein [Pseudoramibacter alactolyticus ATCC 23263]
Length = 341
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 6/152 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E DVL G+KTG+ + R HR G H TV+ W+ E+ E+LLQRRA KDS PG
Sbjct: 157 ELFDVLDENGRKTGVVRERGVAHRDGSLHGTVHMWVVRRGEAGPEVLLQRRAQSKDSNPG 216
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ--QNVINDGKFINNE 124
+DISSAGHI AG + +A RE++EELG+ + + ++ ++ + F +NE
Sbjct: 217 CYDISSAGHIVAGGEVMDAAVREMREELGLTVRPEELHYLGPHRGGFRSRFHGHPFWDNE 276
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
+ V++ T NP+ ++ TLQ EV+AV+++
Sbjct: 277 LSHVFVYT--NPVTVDDLTLQPEEVAAVRWMG 306
>gi|365119408|ref|ZP_09337530.1| hypothetical protein HMPREF1033_00876 [Tannerella sp.
6_1_58FAA_CT1]
gi|363648729|gb|EHL87883.1| hypothetical protein HMPREF1033_00876 [Tannerella sp.
6_1_58FAA_CT1]
Length = 670
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 160/357 (44%), Gaps = 35/357 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S++D G ETY D + G KA++EA + ++ +A+ + ++ +N Q E N
Sbjct: 284 ILWVGDLNSDIDFVNGFTETYGDPL-GMKASWEALVNFKNKEASRRTEIISNNAQWFESN 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+DN +K ++V +VI GD + NLPN I D G+ V ++N++
Sbjct: 343 SPVDNQFKKENVKGVSAKVITAAILGGDSYPSTAIGINLPNSNWIRHDHGSKSVTIENIT 402
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQS 619
+A K + E F + H HEC +G S L G
Sbjct: 403 DAYDKAAQGNGFAEEFVWSDTERNWMEKYGFQADNLHTDLHEC---LGHASGKLLPGTDP 459
Query: 620 TVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--V 674
L+ S +EEA+AD+ L+ A ++ LLP + KS Y ++ +
Sbjct: 460 DA---LKAYTSTLEEARADLFALYYIADPKIVSLGLLPTADAYKSEYYKYMMNGLMTQLT 516
Query: 675 RFG----LEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLS 722
R +EE+H + + L W+ EK A F + TF V D+DK+ + L
Sbjct: 517 RIAPGKNIEEAHMRNRQLIAAWVLEKGAQDKVVEFKKKNGKTFVVINDYDKMRTLLGELL 576
Query: 723 TEILTIQARGDKEAASLLLQKYCTMTQP--LKVALQKLENVQV-PVD--IAPTFTAV 774
EI I++ GD EA L++ Y P K L + E + + P I P +T V
Sbjct: 577 AEIQRIKSTGDYEAGKNLVETYAVKVDPDLHKEVLARYEKLNIAPYKGFINPVYTPV 633
>gi|167747742|ref|ZP_02419869.1| hypothetical protein ANACAC_02463 [Anaerostipes caccae DSM 14662]
gi|167653104|gb|EDR97233.1| hydrolase, NUDIX family [Anaerostipes caccae DSM 14662]
Length = 339
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 10/159 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E D+LT G+ TGI K RS VH GD H T + W+ ++LLQ+R+ KD++PG
Sbjct: 158 ELFDILTSDGKPTGIVKERSIVHTGGDLHGTSHIWLVRRKQNGFDVLLQKRSKEKDAFPG 217
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND---GK-FIN 122
+D+SSAGH++AGD L +A REL EELG+ + F+F+ ++ +V+ D GK F N
Sbjct: 218 YYDVSSAGHMAAGDDYLNTAVRELSEELGVTAEPEEFKFI--GMRDSVVKDIFHGKPFHN 275
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+E + VY+ T + E F LQ+ EV +V ++ + E++
Sbjct: 276 HELSAVYVYET--DLAEEQFRLQKEEVDSVLWMDFGEFE 312
>gi|254495483|ref|ZP_05108407.1| NUDIX hydrolase [Polaribacter sp. MED152]
gi|85819838|gb|EAQ40995.1| NUDIX hydrolase [Polaribacter sp. MED152]
Length = 184
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+LT G+ TG T +SE H+ G YH TV+ W+F + +++LLQ+RA K +PG+
Sbjct: 2 DELIDILTADGKPTGKTALKSEAHKYGWYHATVHIWLFTKD-EKILLQKRALTKKVFPGL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDIS AGHI+AG++ L SA+RE+ EE+G+ L + + T + Q V + I+NE
Sbjct: 61 WDISVAGHIAAGETILSSAKREIFEEIGLALDEKDLIKIGTRIHQ-VSHANGIIDNEHHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVK 153
V++ +P++ +Q+ EV+A+K
Sbjct: 120 VFIAEL--KVPVDELKIQKEEVAAIK 143
>gi|163788688|ref|ZP_02183133.1| Hydrolase of MutT (Nudix) family protein [Flavobacteriales
bacterium ALC-1]
gi|159875925|gb|EDP69984.1| Hydrolase of MutT (Nudix) family protein [Flavobacteriales
bacterium ALC-1]
Length = 183
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E++D++T G TG +S+ H+ G YH T++ W++ E+LLQ+R+ K +P +
Sbjct: 2 DEYIDIVTKEGNPTGKVALKSDAHKNGWYHNTIHLWLYTRKG-EILLQQRSRKKKIYPLL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S+AGHI AG+ + +A RE +EE+G+ L + TFL + N G +NEF
Sbjct: 61 WDVSTAGHIDAGEIFIEAALRETKEEIGLTLKPKHLHKIGTFLHET--NYGDIQDNEFHQ 118
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
VY+ + L T Q+ EV A+K +++E +K LL + + +
Sbjct: 119 VYIAEL--TVDLNKLTPQKNEVEALKLVSFETFKKLLEQSETN 159
>gi|218133226|ref|ZP_03462030.1| hypothetical protein BACPEC_01090 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992099|gb|EEC58103.1| hydrolase, NUDIX family [[Bacteroides] pectinophilus ATCC 43243]
Length = 200
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF-----AESTQELLLQ 55
M E++ EE L++L G+ TG K R VHR GD H T + WI ++ ++LLQ
Sbjct: 5 MQENISSEEMLEILDNNGRPTGRAKARRLVHRDGDAHATSHVWIIRADNVGKTGYDILLQ 64
Query: 56 RRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEF--VFTFLQQN 113
+R+ KDS+P +DISSAGHI G + SA REL+EELGI+ ++ EF V +
Sbjct: 65 KRSHNKDSFPDCYDISSAGHIPFGQGYIESAIRELKEELGIDASEEELEFIGVHDAFNRA 124
Query: 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162
F+N+E ++VYL+ P +E F LQ EV +V +I ++E N
Sbjct: 125 EFYGQPFLNHEISNVYLLER-GPEAVE-FRLQPEEVQSVMWIDFDECYN 171
>gi|291560562|emb|CBL39362.1| Isopentenyldiphosphate isomerase [butyrate-producing bacterium
SSC/2]
Length = 333
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E D+L G KTG K RS VH GD H TV+ WI E +LLLQ+R+ KDS+PG
Sbjct: 159 EFFDILDENGNKTGKIKERSLVHEDGDIHGTVHIWIRRKTEKGYDLLLQKRSKEKDSFPG 218
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+DISSAGHISAGD L +A REL+EELGI + + V + + +N GKF EF
Sbjct: 219 CYDISSAGHISAGDEPLETALRELKEELGIKAEPEQLKKV--CMHEGSMN-GKFYGREFK 275
Query: 127 DVYLVTTL---NPIPLEAFTLQQTEVSAVKYIAYEE 159
+ + T + + LQ+ EV V ++ EE
Sbjct: 276 NHEISTVYMYEETVDITKLKLQKEEVEEVMWMDQEE 311
>gi|317473481|ref|ZP_07932773.1| NUDIX domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316898992|gb|EFV21014.1| NUDIX domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 339
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 10/159 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E D+LT G+ TGI K RS VH GD H T + W+ ++LLQ+R+ KD++PG
Sbjct: 158 ELFDILTPDGKPTGIVKERSIVHTGGDLHGTSHIWLVRRKQHGFDVLLQKRSKEKDAFPG 217
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND---GK-FIN 122
+D+SSAGH++ GD L +A REL EELG+ + F+F+ ++ +V+ D GK F N
Sbjct: 218 CYDVSSAGHMAVGDDYLHTAVRELSEELGVTAEPEDFKFI--GMRDSVVKDTFHGKPFHN 275
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+E + VY+ T + E F LQ+ EV +V ++ + E++
Sbjct: 276 HELSAVYVYET--DLSEEKFRLQKEEVDSVLWMDFREFE 312
>gi|167768610|ref|ZP_02440663.1| hypothetical protein CLOSS21_03169 [Clostridium sp. SS2/1]
gi|167710134|gb|EDS20713.1| hydrolase, NUDIX family [Clostridium sp. SS2/1]
Length = 346
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E D+L G KTG K RS VH GD H TV+ WI E +LLLQ+R+ KDS+PG
Sbjct: 172 EFFDILDENGNKTGKIKERSLVHEDGDIHGTVHIWIRRKTEKGYDLLLQKRSKEKDSFPG 231
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+DISSAGHISAGD L +A REL+EELGI + + V + + +N GKF EF
Sbjct: 232 CYDISSAGHISAGDEPLETALRELKEELGIKAEPEQLKKV--CMHEGSMN-GKFYGREFK 288
Query: 127 DVYLVTTL---NPIPLEAFTLQQTEVSAVKYIAYEE 159
+ + T + + LQ+ EV V ++ EE
Sbjct: 289 NHEISTVYMYEETVDITKLKLQKEEVEEVMWMDQEE 324
>gi|406985372|gb|EKE06170.1| hypothetical protein ACD_19C00067G0005 [uncultured bacterium]
Length = 185
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 11 LDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDI 70
+D++ G+ G + + VH++G +HR V+ WI + +E+L+Q+R+ D++P +WD
Sbjct: 4 IDIINEDGEVVG-QQDKDLVHQLGSWHRAVHIWII-NNKREILIQKRSPNVDAYPNLWDF 61
Query: 71 SSAGHISAGDSSLISAQRELQEELGI-NLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 129
S GH+ A + L AQRE QEELG+ ++ F F+F F +N GK+INNE VY
Sbjct: 62 SCGGHVDADEDLLTCAQRETQEELGLTDVLSLKFVFLFDFKDSFTLNGGKYINNEIDSVY 121
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
LV +L+ L+ ++Q E+S ++++ Y+E + + + FVP
Sbjct: 122 LV-SLDSSNLK-ISMQTEELSQIEWVNYQELEKRIIEHPEGFVP 163
>gi|29347256|ref|NP_810759.1| dipeptidyl-peptidase III [Bacteroides thetaiotaomicron VPI-5482]
gi|383125122|ref|ZP_09945778.1| hypothetical protein BSIG_4411 [Bacteroides sp. 1_1_6]
gi|29339155|gb|AAO76953.1| putative dipeptidyl-peptidase III [Bacteroides thetaiotaomicron
VPI-5482]
gi|382983454|gb|EES66674.2| hypothetical protein BSIG_4411 [Bacteroides sp. 1_1_6]
Length = 675
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 190/427 (44%), Gaps = 43/427 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF+ +K + E + L+ +V ++ + + Y + +
Sbjct: 197 QQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGGL-----YTQAIEKIVY 251
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + + D D I W+ +LDS +D G E+Y D
Sbjct: 252 WLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 311
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D AT + ++ N Q E + P+D ++K + V +VI
Sbjct: 312 PL-GVKASWESLVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 370
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD---VCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K + VC +E+
Sbjct: 371 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNEEFVCNDEER 430
Query: 585 QELVDFDSFFT--HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADIV 640
Q + + H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 431 QRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADLF 482
Query: 641 GLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFN 691
GL+ A L+ L+P + K+ Y +FL + VR +EE+H + + L
Sbjct: 483 GLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLIAR 542
Query: 692 WLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
W+FEK A + T+ V D++KV L EI I++ GD E A L++
Sbjct: 543 WVFEKGAPDKVVEMVKKDGKTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLVEN 602
Query: 744 YCTMTQP 750
Y P
Sbjct: 603 YAVKVDP 609
>gi|410633698|ref|ZP_11344338.1| dipeptidyl-peptidase III [Glaciecola arctica BSs20135]
gi|410146358|dbj|GAC21205.1| dipeptidyl-peptidase III [Glaciecola arctica BSs20135]
Length = 702
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 200/449 (44%), Gaps = 58/449 (12%)
Query: 364 KRRSEFNLDSSLS---GHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMA 420
KR+ + L+S L+ G +V+ VG +YD +T + L KA +A
Sbjct: 242 KRKVSWGLNSKLTKTDGQLVEQV-WKVGGMYD-----------KSITEIVQWLDKAATVA 289
Query: 421 SSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDAIFGYKATF 476
+ K+ L A + S + D D I W+ +++S++DV G E Y+D + Y+ +F
Sbjct: 290 ENAQQKKALTLLAKYYRSGDLKDFDDYSIEWVKDVNSDVDVVNGFIEVYDDPL-AYRGSF 348
Query: 477 EAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGP 536
E+ + ++D AT + Q E N P+ A+K K+V + I ++ SGD
Sbjct: 349 ESVVSVKDHHATKVISKIAAQAQWFEDNSPLIEAHKKKEVKGITGKAITVVVESGDASPS 408
Query: 537 QTVAFNLPNDERIVKDRGTSMVMLKNVSEA----KFKNILRPIADVCIRKEQQELVDFDS 592
+ NLPN I + G+ V L N+ +A K ++ D K +E S
Sbjct: 409 TPIGINLPNANWIRAEHGSKSVSLTNIVDAYDNVKGGSLAEFAWDEAELKRGKEFGPLAS 468
Query: 593 FFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIG 650
++ HE IG S + G T + L++ SA+EE +AD+V L+ L + LI
Sbjct: 469 HLLTDL-HEV---IGHASGQINPGV-GTPKETLKQYSSALEEGRADLVALYYLMDEKLIE 523
Query: 651 RDLLPK-SLVKSMYVSFLAGC----FRSVRFG--LEESHGKGQALQFNWLFEK------- 696
++P K+ Y S++ R ++ G +EE+H + + L +W+FEK
Sbjct: 524 LGIMPSLETGKAAYDSYIRNGMMLQLRRLKKGEVIEEAHMRNRQLVASWVFEKGATENVI 583
Query: 697 EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCT-----MTQP 750
E + F V D+ K+ G L E+ I++ GD + L++ Y + Q
Sbjct: 584 EKRVRDGKTYFFVNDYIKLRGLFGDLLRELQRIKSEGDFASGQALIENYAVKVNDDIHQE 643
Query: 751 LKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
+ +KL DIAP +N L+
Sbjct: 644 VLARYEKL-------DIAPYSGFINPKLE 665
>gi|298387433|ref|ZP_06996985.1| peptidase, M49 family [Bacteroides sp. 1_1_14]
gi|298259640|gb|EFI02512.1| peptidase, M49 family [Bacteroides sp. 1_1_14]
Length = 682
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 190/427 (44%), Gaps = 43/427 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF+ +K + E + L+ +V ++ + + Y + +
Sbjct: 204 QQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGGL-----YTQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + + D D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D AT + ++ N Q E + P+D ++K + V +VI
Sbjct: 319 PL-GVKASWESLVNFKDLGATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD---VCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K + VC +E+
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNEEFVCNDEER 437
Query: 585 QELVDFDSFFT--HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADIV 640
Q + + H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 438 QRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADLF 489
Query: 641 GLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFN 691
GL+ A L+ L+P + K+ Y +FL + VR +EE+H + + L
Sbjct: 490 GLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLIAR 549
Query: 692 WLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
W+FEK A + T+ V D++KV L EI I++ GD E A L++
Sbjct: 550 WVFEKGAPDKVVEMVKKDGKTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLVEN 609
Query: 744 YCTMTQP 750
Y P
Sbjct: 610 YAVKVDP 616
>gi|345514775|ref|ZP_08794281.1| hypothetical protein BSEG_03830 [Bacteroides dorei 5_1_36/D4]
gi|345455786|gb|EEO47689.2| hypothetical protein BSEG_03830 [Bacteroides dorei 5_1_36/D4]
Length = 670
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 284 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 343 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 402
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K AD VC +E++ + + H HEC HG G LP Q
Sbjct: 403 DAYNKAAHGNGFADEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 459
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L +I L P K+ Y +++ +
Sbjct: 460 DA----LKAYGSTIEEARADLFGLYYLPDDKMIELGLTPDGDAFKAEYYTYMMNGLMTQL 515
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 516 VRIELGNMVEEAHMRNRQLIARWTFEKGAADEVVEMVKKDGKTYVKINDYQKLRTLFGQL 575
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 576 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 605
>gi|423228782|ref|ZP_17215188.1| hypothetical protein HMPREF1063_01008 [Bacteroides dorei
CL02T00C15]
gi|423247593|ref|ZP_17228642.1| hypothetical protein HMPREF1064_04848 [Bacteroides dorei
CL02T12C06]
gi|392631923|gb|EIY25890.1| hypothetical protein HMPREF1064_04848 [Bacteroides dorei
CL02T12C06]
gi|392635521|gb|EIY29420.1| hypothetical protein HMPREF1063_01008 [Bacteroides dorei
CL02T00C15]
Length = 670
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 284 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 343 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 402
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K AD VC +E++ + + H HEC HG G LP Q
Sbjct: 403 DAYNKAAHGNGFADEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 459
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L +I L P K+ Y +++ +
Sbjct: 460 DA----LKAYGSTIEEARADLFGLYYLPDDKMIELGLTPDGDAFKAEYYTYMMNGLMTQL 515
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 516 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVEMVKKDGKTYVKINDYQKLRTLFGQL 575
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 576 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 605
>gi|212693850|ref|ZP_03301978.1| hypothetical protein BACDOR_03372 [Bacteroides dorei DSM 17855]
gi|423239787|ref|ZP_17220903.1| hypothetical protein HMPREF1065_01526 [Bacteroides dorei
CL03T12C01]
gi|212663602|gb|EEB24176.1| peptidase family M49 [Bacteroides dorei DSM 17855]
gi|392645827|gb|EIY39550.1| hypothetical protein HMPREF1065_01526 [Bacteroides dorei
CL03T12C01]
Length = 670
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 284 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 343 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 402
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K AD VC +E++ + + H HEC HG G LP Q
Sbjct: 403 DAYNKAAHGNGFADEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 459
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L +I L P K+ Y +++ +
Sbjct: 460 DA----LKAYGSTIEEARADLFGLYYLPDDKMIELGLTPDGDAFKAEYYTYMMNGLMTQL 515
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 516 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVEMVKKDGKTYVKINDYQKLRTLFGQL 575
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 576 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 605
>gi|224164015|ref|XP_002338630.1| predicted protein [Populus trichocarpa]
gi|222873050|gb|EEF10181.1| predicted protein [Populus trichocarpa]
Length = 85
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 662 MYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKV 714
MYVSFLAGCFRSVRFGLEE+HGKGQALQFNW++EKEAFILH D+TFSVDF KV
Sbjct: 1 MYVSFLAGCFRSVRFGLEEAHGKGQALQFNWMYEKEAFILHPDETFSVDFAKV 53
>gi|429763104|ref|ZP_19295466.1| hydrolase, NUDIX family [Anaerostipes hadrus DSM 3319]
gi|429179759|gb|EKY20997.1| hydrolase, NUDIX family [Anaerostipes hadrus DSM 3319]
Length = 346
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 10/157 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E D+L G KTG K RS VH GD H TV+ WI E +LLLQ+R+ KDS+PG
Sbjct: 172 EFFDILDENGNKTGKIKERSLVHEDGDIHGTVHIWIRRKTEKGYDLLLQKRSKQKDSFPG 231
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG----KFIN 122
+DISSAGHISAGD L +A REL+EELGI + + V + + +N +F N
Sbjct: 232 CYDISSAGHISAGDEPLETALRELEEELGIKAEPEQLKKV--CMHEGSMNGNFYGREFKN 289
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
+E + VY+ + + LQ+ EV V ++ EE
Sbjct: 290 HEISTVYMYE--ETVDITKLKLQKEEVEEVMWMDQEE 324
>gi|237708474|ref|ZP_04538955.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457403|gb|EEO63124.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 674
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 288 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 346
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 347 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 406
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K AD VC +E++ + + H HEC HG G LP Q
Sbjct: 407 DAYNKAAHGNGFADEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 463
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L +I L P K+ Y +++ +
Sbjct: 464 DA----LKAYGSTIEEARADLFGLYYLPDDKMIELGLTPDGDAFKAEYYTYMMNGLMTQL 519
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 520 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVEMVKKDGKTYVKINDYQKLRTLFGQL 579
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 580 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 609
>gi|225026341|ref|ZP_03715533.1| hypothetical protein EUBHAL_00583 [Eubacterium hallii DSM 3353]
gi|224956351|gb|EEG37560.1| hydrolase, NUDIX family [Eubacterium hallii DSM 3353]
Length = 186
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 11/158 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWP 65
E LD+ G TG K RS VH GD H T + WI ++ + +LLLQ+R++ KD++P
Sbjct: 2 EFLDIRDKNGNPTGEVKERSLVHADGDIHGTSHVWIVRKNEKGSYDLLLQKRSENKDAFP 61
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND---GK-FI 121
G +DISSAGH+ AG L SA REL+EELGI + F+ L + + GK F
Sbjct: 62 GCYDISSAGHLPAGQDYLSSALRELEEELGIKAKPEQLHFM--GLHEGCCEETFYGKPFK 119
Query: 122 NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
N+E + VYL P+ +E TLQ+ EV V ++ ++E
Sbjct: 120 NHEISHVYLYQ--EPVNIEDLTLQKEEVQEVCWLDFKE 155
>gi|238922217|ref|YP_002935731.1| hypothetical protein EUBELI_20452 [Eubacterium eligens ATCC 27750]
gi|238873889|gb|ACR73597.1| Hypothetical protein EUBELI_20452 [Eubacterium eligens ATCC 27750]
Length = 191
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G+ TG T R H G HRT + WI +S + E+LLQ+RA KDS+PG
Sbjct: 8 ELLDIVDENGKPTGETVERKTAHSEGIRHRTAHVWIVRKSDEGAEVLLQKRAMNKDSFPG 67
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINNE 124
+D SSAGHI AGD SA REL EELGI D +FV TF+ Q F ++E
Sbjct: 68 RYDTSSAGHIQAGDEPEESAIRELHEELGIKASVDDLQFVDTFVIQYEKEFYGKMFKDSE 127
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 158
A VY+ T P+ ++ TLQ+ E+ V++ E
Sbjct: 128 IAFVYVYT--KPVNIDELTLQKEELDGVEWFNLE 159
>gi|265751365|ref|ZP_06087428.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263238261|gb|EEZ23711.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 674
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 288 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 346
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 347 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 406
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K AD VC +E++ + + H HEC HG G LP Q
Sbjct: 407 DAYNKAAHGNGFADEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 463
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L +I L P K+ Y +++ +
Sbjct: 464 DA----LKAYGSTIEEARADLFGLYYLPDDKMIELGLTPDGDAFKAEYYTYMMNGLMTQL 519
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 520 VRIELGNMVEEAHMRNRQLIARWTFEKGAADEVVEMVKKDGKTYVKINDYQKLRTLFGQL 579
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 580 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 609
>gi|291518933|emb|CBK74154.1| Isopentenyldiphosphate isomerase [Butyrivibrio fibrisolvens 16/4]
Length = 243
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWP 65
EE D++ GQ TG T RS+ H G HRT + W+ ++ E+LLQ+RA KDS+P
Sbjct: 3 EEIFDIVDEKGQPTGETVTRSQAHAEGVRHRTAHIWVVRDNGDKTEVLLQKRALNKDSFP 62
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF-LQQNVINDGK-FINN 123
G +D SSAGHI AGD L SA REL EELGI D F TF +Q GK F +N
Sbjct: 63 GRYDTSSAGHIQAGDEPLESAIRELSEELGIQADADDLNFAGTFPIQYEKEFHGKMFRDN 122
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE-YKNLLAKDDPSFV 172
E A VY+ + ++ T+Q+ E+ +V++ EE Y+ D F
Sbjct: 123 EIAFVYVYD--EDVDIDKLTIQKEELDSVEWFDLEEVYRACQPPRDEKFC 170
>gi|261415539|ref|YP_003249222.1| NUDIX hydrolase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|385790455|ref|YP_005821578.1| putative isopentenyl-diphosphate delta-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371995|gb|ACX74740.1| NUDIX hydrolase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327268|gb|ADL26469.1| putative isopentenyl-diphosphate delta-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 182
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ EE +D+L G G ++ R+EVH G +HRTV+ W FA + ++ Q R+ K++ P
Sbjct: 1 MAEEMIDILNSDGTPAGYSRSRTEVHAKGLWHRTVHIWAFAPDGR-IVFQLRSHLKENNP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
+ D S AGHI+AGD S + REL+EE+GI + E++F +N +N+ + +NE+
Sbjct: 60 NLLDTSCAGHITAGDDSRHAGVRELREEMGITKRPEDLEYLFEATHENALNNRTYFDNEY 119
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
D Y + TL+ +E Q EV + +E+ + A++ FV
Sbjct: 120 YDTYKI-TLSDEEVEHLVPQPGEVDDFILMTRDEFLAMFAQNPEKFV 165
>gi|294776078|ref|ZP_06741573.1| peptidase family M49 [Bacteroides vulgatus PC510]
gi|294450070|gb|EFG18575.1| peptidase family M49 [Bacteroides vulgatus PC510]
Length = 670
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 284 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 343 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 402
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
EA K D VC +E++ + + H HEC HG G LP Q
Sbjct: 403 EAYNKAAHGNGFTDEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 459
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L ++ L P K+ Y +++ +
Sbjct: 460 DA----LKAYGSTIEEARADLFGLYYLPDDKMVELGLTPDGDAFKAEYYTYMMNGLMTQL 515
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 516 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVELVKKDGKTYVKINDYQKLRTLFGQL 575
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 576 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 605
>gi|313203325|ref|YP_004041982.1| dipeptidyl-peptidase iii [Paludibacter propionicigenes WB4]
gi|312442641|gb|ADQ78997.1| Dipeptidyl-peptidase III [Paludibacter propionicigenes WB4]
Length = 672
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 215/499 (43%), Gaps = 72/499 (14%)
Query: 279 KSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDK 338
K P S + +A +T KL P P K A L K N+Y ++ +
Sbjct: 142 KLPLSKGETVDALIT------KLTPVLFDPTVYPKRTNQAAGVDLIKTSANNYYGDNITQ 195
Query: 339 MEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL---SGHIVDATNHSVGSIYDLYS 395
E E + + ++ S+ L+S L G +V+ T + VG +Y
Sbjct: 196 AEVEAFYDKMKNPNDKEPVSY----------GLNSKLVKEKGVLVEKT-YKVGGLY---- 240
Query: 396 VPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-EL 451
+ R L KA +A + K +++S + + + + Y + I W+ +L
Sbjct: 241 -------GKAIARIVGWLEKAATVAENDKQKDVINSLTEFYKTGSLKTYDEYSIKWVKDL 293
Query: 452 DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 511
S++D G ETY D + G KA++E+ + ++ +AT + ++ N Q E + P+D +
Sbjct: 294 ASQVDFVNGFTETYGDPL-GMKASWESIVNFKNIEATKRTQIISSNAQWFEDHSPIDAKF 352
Query: 512 KSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNI 571
K + V +VI +GD + NLPN I + G+ V ++N++EA +
Sbjct: 353 KKETVKGVSAKVITATILAGDCYPATPIGVNLPNSNWIRHEYGSKSVTIENITEAYDQAS 412
Query: 572 LRP-------IADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITL-PDGRQSTVR 622
L ++DV RK +E + H HEC HG G + PD
Sbjct: 413 LGNGFAEEFMLSDVE-RKRAKEFASLTNNL-HTDLHECLGHGSGKLLPGVDPDA------ 464
Query: 623 LELQELHSAMEEAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCFRS----VR 675
L+ S +EEA+AD+ GL+ + ++ LLP K K+ Y S++ + ++
Sbjct: 465 --LKAYGSTIEEARADLFGLYYMADPKIVELGLLPDKEAFKAEYYSYIMNGLMTQLTRIQ 522
Query: 676 FG--LEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEI 725
G +EE+H + + L +W FEK F+ +TF D+ K+ L EI
Sbjct: 523 PGKDIEEAHMRNRQLIASWAFEKGKAENVIEFVTRDGETFVKVNDYQKLRTLFGQLLAEI 582
Query: 726 LTIQARGDKEAASLLLQKY 744
I++ GD E L++ Y
Sbjct: 583 QRIKSTGDFEGGKNLVETY 601
>gi|408370328|ref|ZP_11168105.1| NUDIX family hydrolase [Galbibacter sp. ck-I2-15]
gi|407744086|gb|EKF55656.1| NUDIX family hydrolase [Galbibacter sp. ck-I2-15]
Length = 183
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 8/170 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G+ TG + +SE H+ G +H T + WI+ + E+L+Q+R+ K+++P
Sbjct: 2 DELVDILDKQGKSTGTSLLKSEAHKKGLFHATAHVWIYNRNG-EILIQKRSGNKETYPNK 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGHI AG+ + +A RE EE+G+ L K + + + VI++ I+ EF
Sbjct: 61 WDVSVAGHICAGEDPVTTAIRETSEEIGLRLQKSDLYKIGQY-RSTVIHNKDLIDCEFNH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD---DPSFVPY 174
+YL T +P+ +Q TEV+A+K+I Y+ L KD S+VP+
Sbjct: 120 IYL--TELKVPIGELRIQTTEVAAIKFIDINIYRESL-KDFSLLKSYVPH 166
>gi|392398031|ref|YP_006434632.1| Peptidase family M49 [Flexibacter litoralis DSM 6794]
gi|390529109|gb|AFM04839.1| Peptidase family M49 [Flexibacter litoralis DSM 6794]
Length = 720
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 147/571 (25%), Positives = 236/571 (41%), Gaps = 73/571 (12%)
Query: 241 EIFYLQVWYSNPVLRDWLKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVK 300
E + +VW+SN + H SE + Y +S ++ D+ L A
Sbjct: 135 ETYLKRVWFSNGI-------HHHYSEKKLMPEFSYEFFESLVTNSDQTGFSLAEGQDATA 187
Query: 301 LLP-------DAT---KPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTE 350
L DA K VN KG + L K ANFY ++ + E E + +
Sbjct: 188 FLAMLKPVIFDANVDGKKVNKTKGQD------LVKTSAANFYE-NITQKEVEAFYKNFAN 240
Query: 351 KQQEDATSFF---TVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLT 407
E S+ +IK + N+ L V + +G+ +Y + L
Sbjct: 241 PNDETPISYGLNSQLIKGEAPDNILVGLQKDGVYEYKYGIGT------AEKRGKYAAALE 294
Query: 408 RASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWIE-LDSELDVTIGPYE 463
+ L KA +A S K+++ + + + + + IAW E D+ +D G E
Sbjct: 295 KMVFWLEKASTVAESAGQKKVIDLLVQYYKTGDLKTFDEMSIAWAESTDTNIDFINGFIE 354
Query: 464 TYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRV 523
Y D + GY+A +E+ I + D +A+ ++ + +N Q E N + +K K+V R+
Sbjct: 355 VYGDPL-GYRANYESVIFMDDKEASKRMAVLSENAQYFEDNSSIMEEHKKKNVKGVTYRI 413
Query: 524 IQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA-----KFKNILRPIADV 578
I +I +GD + NLPN I + G+ V L N+ +A K I
Sbjct: 414 ITVINEAGDAAPSTPIGINLPNANWIRQQHGSKSVSLGNIEDAYNHASGGKTIAEFYPTE 473
Query: 579 CIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKAD 638
++ Q+E D H HE IG S + G T + L+ S +EEA+AD
Sbjct: 474 ELQNRQKEYGDVGGKM-HTALHEV---IGHASGQINKG-VGTPKETLKNYSSTLEEARAD 528
Query: 639 IVGLWAL--KFLIGRDLLPK-SLVKSMYVSFLAGC----FRSVRFG--LEESHGKGQALQ 689
+V L+ L L+ LLP K+ Y S++ R + G +EE H + + L
Sbjct: 529 LVALYYLLDPKLVDLGLLPSVEAGKAEYDSYIMNGMMLQLRRLDEGADIEEDHMRNRQLV 588
Query: 690 FNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W FEK E ++ F V D+DK+ L EI +++ GD AA L+
Sbjct: 589 AKWAFEKGQAENVIEKKMIDGKTYFLVNDYDKLRVIFGELLKEIQRLKSEGDYAAAEKLV 648
Query: 742 QKYCTMTQPLKVALQKLENVQ---VPVDIAP 769
+ Y +KV + L+ V+ DIAP
Sbjct: 649 EGYG-----VKVDAEMLKEVKERYAQFDIAP 674
>gi|355679517|ref|ZP_09061350.1| hypothetical protein HMPREF9469_04387 [Clostridium citroniae
WAL-17108]
gi|354812094|gb|EHE96714.1| hypothetical protein HMPREF9469_04387 [Clostridium citroniae
WAL-17108]
Length = 344
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 7/156 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWP 65
E D+L G++TG + R+ VH GD H T + WI + +LLLQ+R+ KDS+P
Sbjct: 153 ELFDILDDHGERTGRVRERTMVHLDGDIHGTAHIWIVRKGPYGGFDLLLQKRSRCKDSYP 212
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEF--VFTFLQQNVINDGKFINN 123
G +DIS+AGH+ AGD L +A REL+EELGI ++ EF + T + F ++
Sbjct: 213 GCYDISAAGHVQAGDDFLPTALRELKEELGIEASQEDLEFAGIHTGYMEEEFYGSMFKDS 272
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
E++ VY+ P+ E LQ+ EV +V ++ +E
Sbjct: 273 EYSHVYVYR--RPVEAENLKLQEEEVESVMWMGLDE 306
>gi|423312432|ref|ZP_17290369.1| hypothetical protein HMPREF1058_00981 [Bacteroides vulgatus
CL09T03C04]
gi|392688916|gb|EIY82200.1| hypothetical protein HMPREF1058_00981 [Bacteroides vulgatus
CL09T03C04]
Length = 670
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 284 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 343 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 402
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K D VC +E++ + + H HEC HG G LP Q
Sbjct: 403 DAYNKAAHGNGFTDEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 459
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L ++ L P K+ Y +++ +
Sbjct: 460 DA----LKAYGSTIEEARADLFGLYYLPDDKMVELGLTPDGDAFKAEYYTYMMNGLMTQL 515
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 516 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVELVKKDGKTYVKINDYQKLRTLFGQL 575
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 576 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 605
>gi|319643552|ref|ZP_07998173.1| dipeptidyl-peptidase III [Bacteroides sp. 3_1_40A]
gi|345518436|ref|ZP_08797887.1| hypothetical protein BSFG_02283 [Bacteroides sp. 4_3_47FAA]
gi|254835827|gb|EET16136.1| hypothetical protein BSFG_02283 [Bacteroides sp. 4_3_47FAA]
gi|317384816|gb|EFV65774.1| dipeptidyl-peptidase III [Bacteroides sp. 3_1_40A]
Length = 670
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 284 IAWVKDLDSHVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 342
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 343 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 402
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K D VC +E++ + + H HEC HG G LP Q
Sbjct: 403 DAYNKAAHGNGFTDEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 459
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L ++ L P K+ Y +++ +
Sbjct: 460 DA----LKAYGSTIEEARADLFGLYYLPDDKMVELGLTPDGDAFKAEYYTYMMNGLMTQL 515
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 516 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVELVKKDGKTYVKINDYQKLRTLFGQL 575
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 576 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 605
>gi|319902945|ref|YP_004162673.1| peptidase 3 [Bacteroides helcogenes P 36-108]
gi|319417976|gb|ADV45087.1| Dipeptidyl-peptidase III [Bacteroides helcogenes P 36-108]
Length = 686
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 173/383 (45%), Gaps = 47/383 (12%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y S L + L KA D+A +P K ++ + + + + D I W+ +LDS +D
Sbjct: 253 YGSALEKIVYWLKKAEDVAETPEQKAVIAKLVEFYETGDLKTFDEYAILWVKDLDSRIDF 312
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D AT + +L N Q E + P++ +K + V
Sbjct: 313 INGFTESYGDPL-GMKASWESLVNFKDMVATHRTELISSNAQWFEDHSPVEKQFKKEKVK 371
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK-------N 570
+VI +GD+ + NLPN I G+ V + N+++A K N
Sbjct: 372 GVSAKVITAAILAGDLYPATAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 431
Query: 571 ILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLEL 625
+D +R L+D + T H HEC HG G + PD L
Sbjct: 432 EEFVYSDAELR-----LIDKYADLTGELHTDLHECLGHGSGKLLPGVDPDA--------L 478
Query: 626 QELHSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF---- 676
+ S +EEA+AD+ GL+ A L+ L P + K+ Y +FL + VR
Sbjct: 479 KAYGSTIEEARADLFGLYYVADPKLVELGLTPDADAYKAEYYTFLMNGLMTQLVRIEPGN 538
Query: 677 GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTI 728
+EE+H + + L W+FEK A I T+ V D++K+ L EI +
Sbjct: 539 NVEEAHMRNRQLIARWIFEKGAAEKVVEMIKKDGKTYVVVNDYEKLRSLFGELLAEIQRV 598
Query: 729 QARGDKEAASLLLQKYCTMTQPL 751
++ GD +AA L++ Y P+
Sbjct: 599 KSTGDFKAARNLVETYAVKVDPV 621
>gi|347530725|ref|YP_004837488.1| NUDIX hydrolase [Roseburia hominis A2-183]
gi|345500873|gb|AEN95556.1| NUDIX hydrolase [Roseburia hominis A2-183]
Length = 183
Score = 103 bits (257), Expect = 3e-19, Method: Composition-based stats.
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 10/157 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWPG 66
E LD++ G TG T PR HR G HRT + WIF ++LLQ+R+D KDS PG
Sbjct: 2 ELLDIVDEKGNPTGETVPREVAHREGIRHRTAHVWIFRRRGGVVQILLQKRSDNKDSDPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT----FLQQNVINDGKFIN 122
+DISSAGHI AG + SA REL+EELG+++ D E ++ F + + F +
Sbjct: 62 CYDISSAGHIPAGSDYIPSAVRELKEELGVDMNGD--ELIYCGQRRFRFEREFHGSMFRD 119
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
N+ ++VY + EAF LQ+ EVS V+++ + +
Sbjct: 120 NQVSNVYALWLDR--EEEAFVLQEEEVSEVRWMDFAD 154
>gi|150004560|ref|YP_001299304.1| dipeptidyl-peptidase III [Bacteroides vulgatus ATCC 8482]
gi|149932984|gb|ABR39682.1| putative dipeptidyl-peptidase III [Bacteroides vulgatus ATCC 8482]
Length = 677
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 32/330 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 291 IAWVKDLDSRVDFVNGFIESYGDPL-GLKASWESIVNFKDLEATKRTEIISANAQWFEDH 349
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI GD+ + NLPN I G+ V + N++
Sbjct: 350 SPVDHRFKKKEVKGVSAKVITAAMLGGDLYPATAIGINLPNSNWIRSVHGSKSVTIGNLT 409
Query: 565 EAKFKNIL-RPIAD--VCIRKEQQELVDFDSFFT--HNICHECC-HGIGPHSITLPDGRQ 618
+A K D VC +E++ + + H HEC HG G LP Q
Sbjct: 410 DAYNKAAHGNGFTDEFVCGAEEKEWIKKYADLTGDLHTDLHECLGHGSGQ---LLPGVDQ 466
Query: 619 STVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S +EEA+AD+ GL+ L ++ L P K+ Y +++ +
Sbjct: 467 DA----LKAYGSTIEEARADLFGLYYLPDDKMVELGLTPDGDAFKAEYYTYMMNGLMTQL 522
Query: 674 VRFGL----EESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESL 721
VR L EE+H + + L W FEK A ++ D V D+ K+ L
Sbjct: 523 VRIELGNMVEEAHMRNRQLIARWTFEKGAADKVVELVKKDGKTYVKINDYQKLRTLFGQL 582
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQPL 751
EI I++ GD EAA L++KY P+
Sbjct: 583 LAEIQRIKSEGDFEAARKLVEKYAVKIDPV 612
>gi|317497912|ref|ZP_07956221.1| NUDIX domain-containing protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894791|gb|EFV16964.1| NUDIX domain-containing protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 226
Score = 103 bits (257), Expect = 4e-19, Method: Composition-based stats.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E D+L G KTG K RS VH GD H TV+ WI E +LLLQ+R+ KDS+PG
Sbjct: 52 EFFDILDENGNKTGKIKERSLVHEDGDIHGTVHIWIRRKTEKGYDLLLQKRSKEKDSFPG 111
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+DISSAGHISAGD L +A REL+EELGI + + V + + +N GKF EF
Sbjct: 112 CYDISSAGHISAGDEPLETALRELKEELGIKAEPEQLKKV--CMHEGSMN-GKFYGREFK 168
Query: 127 DVYLVTTL---NPIPLEAFTLQQTEVSAVKYIAYEE 159
+ + T + + LQ+ EV V ++ EE
Sbjct: 169 NHEISTVYMYEETVDITKLKLQKEEVEEVMWMDQEE 204
>gi|380696492|ref|ZP_09861351.1| dipeptidyl-peptidase III [Bacteroides faecis MAJ27]
Length = 675
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 191/429 (44%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF+ +K + E + L+ +V ++ + + Y + +
Sbjct: 197 QQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGGL-----YTQAIEKIVY 251
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + + D D I W+ +LDS +D G E+Y D
Sbjct: 252 WLKKAESVAENDAQKAVIGKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 311
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D +AT + ++ N Q E + P+D ++K + V +VI
Sbjct: 312 PL-GVKASWESLVNFKDLEATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 370
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N + E
Sbjct: 371 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNE--EFVYNDE 428
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+++ +D T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 429 ERQRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 480
Query: 639 IVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQ 689
+ GL+ A L+ L+P + K+ Y +FL + VR +EE+H + + L
Sbjct: 481 LFGLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLI 540
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK A + T+ V D++KV L EI I++ GD E A L+
Sbjct: 541 ARWVFEKGAPDKVVEMVKKDGKTYVVVNDYEKVRELFGELLAEIQRIKSTGDFEGARTLV 600
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 601 ENYAVKVDP 609
>gi|299149454|ref|ZP_07042511.1| peptidase, M49 family [Bacteroides sp. 3_1_23]
gi|298512641|gb|EFI36533.1| peptidase, M49 family [Bacteroides sp. 3_1_23]
Length = 682
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 41/368 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 260 LKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 319
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 320 L-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAI 378
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKEQ 584
+GD+ P + NLPN I G+ V + N+++A K N + +
Sbjct: 379 LAGDLYPPTAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDAE 436
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADI 639
+L+D S T H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 437 IQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADL 488
Query: 640 VGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQF 690
GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 489 FGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLIA 548
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ KV L EI I++ GD E A L++
Sbjct: 549 RWVFEKGAADKAVELVKKDGKTYVVINDYQKVRQLFGELLAEIQRIKSTGDFEGARTLVE 608
Query: 743 KYCTMTQP 750
Y P
Sbjct: 609 NYAVKVDP 616
>gi|333382396|ref|ZP_08474066.1| hypothetical protein HMPREF9455_02232 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828707|gb|EGK01399.1| hypothetical protein HMPREF9455_02232 [Dysgonomonas gadei ATCC
BAA-286]
Length = 690
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 181/398 (45%), Gaps = 45/398 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIE-LDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + S + D +AW+E L+S++D G E Y DA
Sbjct: 268 LEKAQAVAENDAQKNVISKLISYYKSGDLKTFDQYAVAWVEDLNSQVDFVNGFTEVYGDA 327
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + ++ +AT + ++ N Q E + P+D ++K + V +VI +
Sbjct: 328 L-GIKASWESIVNFKNVEATKRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITVAQ 386
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAK---------FKNILRPIADVC 579
GD + NLPN + I KD G+ V ++N+ EA + + A+V
Sbjct: 387 LGGDCYPATPIGINLPNADWIRKDHGSKSVTIENIMEAYDAAGAHTGFGEEFMWSDAEVN 446
Query: 580 IRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKAD 638
I KE + D H HEC HG G LP+ + L E S +EEA+AD
Sbjct: 447 IIKEYGFITD----VLHTDLHECLGHGSGK---LLPEVDPNA----LGEFSSTIEEARAD 495
Query: 639 IVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQ 689
+ GL+ L L+ ++P + K+ Y F+ + VR +EE+H + + L
Sbjct: 496 LFGLYFLADAKLVELGIIPNADAYKAEYYKFMMNGLMTQLVRIEPGKDIEEAHMRNRQLI 555
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W++EK + + T+ V D+ K+ L EI I++ GD A ++
Sbjct: 556 AKWVYEKGKADNVVEYKVRDGKTYVVVNDYTKLRTLFGDLLAEIQRIKSEGDFNGAKAIV 615
Query: 742 QKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
Y K+ + LE + +++ P VN + Q
Sbjct: 616 ANYAVKVDQ-KLHKEVLERYKT-LNMKPYKGFVNPVFQ 651
>gi|375011451|ref|YP_004988439.1| Peptidase family M49 [Owenweeksia hongkongensis DSM 17368]
gi|359347375|gb|AEV31794.1| Peptidase family M49 [Owenweeksia hongkongensis DSM 17368]
Length = 676
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 201/467 (43%), Gaps = 62/467 (13%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTV-IKRRSEFNLDSSLSGHIVDATNHSVG 388
NFY PD+ +E+A +F+ I ++ + L+ +V A + S+
Sbjct: 193 NFYDPDI---------------TEEEAIAFYKKQIDPNTKTPISYGLNSKLVRAEDGSIK 237
Query: 389 SIYDLYSVPYSEE--YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYD 443
V +S E Y S +T L KA +A + + + L D + + + + +
Sbjct: 238 E------VKWSAEGMYGSAITEIIGWLEKAQGVAENEAQGKALGILIDYYKTGDLKKWDE 291
Query: 444 SDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
+IAW+E + ++D E Y+D + GYKAT+E + I+D A+ ++ + DN+Q E
Sbjct: 292 YNIAWVEATEGDIDYINSFIEVYDDPL-GYKATYETVVQIKDFDASKKMAVISDNIQYFE 350
Query: 503 QNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKN 562
N P+ + +K +V +++ + +G + NLPN I + G+ V L N
Sbjct: 351 DNSPIMDEHKKPNVKGVTYKMVNVAGEAGATTPSTPIGVNLPNANWIRAEHGSKSVSLAN 410
Query: 563 V----SEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
+ EAK L E+ + +S H HE +G S L DG
Sbjct: 411 IEHAYEEAKGAGFLEEFTFTKEELERAKKYAGNSSKMHTALHEV---VGHASGKLNDG-V 466
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYV----------SFLA 668
T + L+ S +EE +AD+V L+ +++ L+ L+ +M V + L
Sbjct: 467 GTPKETLRNYASTLEEGRADLVALY---YIMDPKLMEMGLIDTMEVGKAEYDNYIRNGLM 523
Query: 669 GCFRSVRFG--LEESHGKGQALQFNWLFE--KEAFILHSD----DTFSV--DFDKVEGAV 718
R + G +EE H + + L W +E KE I+ T+ V D+DK+
Sbjct: 524 LQLRRLEVGEIIEEDHMRNRQLVAKWAYETGKEDNIIEKKTLDGKTYFVINDYDKLREIF 583
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPL--KVALQKLENVQV 763
EI I++ GD EA L++ Y P K L + E + +
Sbjct: 584 GDQLREIQRIKSEGDYEAGKKLVETYGVQVDPAIHKEVLARTEKLHI 630
>gi|325261663|ref|ZP_08128401.1| mutator MutT protein [Clostridium sp. D5]
gi|324033117|gb|EGB94394.1| mutator MutT protein [Clostridium sp. D5]
Length = 348
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE---STQELLLQRRADFKD 62
++ E D+L G +TGI + R HR G H T + W+ + S ++LLQ+R+ KD
Sbjct: 159 IEMELFDILNPDGSRTGIVRERGVAHREGSLHATSHIWVVQKNEKSGYDVLLQKRSAAKD 218
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ--QNVINDGKF 120
S G +DISSAGH++AGD L SA RE+QEELGI + +FV ++V F
Sbjct: 219 SNAGCYDISSAGHVAAGDEYLNSAVREMQEELGIQADPEELQFVGIHHGGFEDVFYGMPF 278
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
++E + VY+ + P+ + +LQQ EV V ++ Y E +
Sbjct: 279 RDDELSSVYVYS--EPVDIAGLSLQQEEVEEVIWMDYSECR 317
>gi|167753200|ref|ZP_02425327.1| hypothetical protein ALIPUT_01471 [Alistipes putredinis DSM 17216]
gi|167659131|gb|EDS03261.1| peptidase family M49 [Alistipes putredinis DSM 17216]
Length = 657
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 181/405 (44%), Gaps = 46/405 (11%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y+ + + L KA +A P K + + D + + N +D D I W+ + S +D
Sbjct: 227 YSPAIEKIVYWLEKAQGVAQEPQ-KATIAALIDYYKTGNLHDFDRYNILWVRDTVSNVDF 285
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G KA++E+ + D +A + ++ +N Q E + P+D+AY+ K V
Sbjct: 286 VNGFIEDYGDPL-GRKASWESLVNFMDKEACRRTEVISENAQWFEDHSPVDSAYRKKVVK 344
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP--I 575
+VI GD + NLPN + I K+ G+ V + N++ A + +
Sbjct: 345 GVSAKVITAAMLGGDCYPATPIGINLPNADWIRKEHGSKSVTIDNITYAYAQAAHGDGFL 404
Query: 576 ADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSA 631
+ +R E +E +D H HEC HG G + + G EL+ S
Sbjct: 405 EEFMLRPEDRERIDKYGKLADDLHTDLHECLGHGSGQLAPGVKGG-------ELKNYTST 457
Query: 632 MEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL------------- 678
+EEA+AD+ GL+ +L ++ L+ S+ V++ A R + G+
Sbjct: 458 LEEARADLFGLY---YLGDPKMVELGLIPSLDVAY-AEYARYIMNGMMTQLARIEPGKNV 513
Query: 679 EESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQA 730
EE+H + + L W +E+ ++ T+ V D+ K+ + + E+ I++
Sbjct: 514 EEAHMRNRKLIAEWCYEQGKPDNVIEWVEQDGKTYVVVNDYTKLRELLGRMLREVQRIKS 573
Query: 731 RGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVN 775
GD EA L++KY P K+ + L + +DI P VN
Sbjct: 574 EGDFEAGKALVEKYAVTVDP-KLHAEVLTRYKA-LDIEPYSGFVN 616
>gi|115378007|ref|ZP_01465188.1| putative dipeptidyl-peptidase III [Stigmatella aurantiaca DW4/3-1]
gi|310819624|ref|YP_003951982.1| peptidase m49 family protein, dipeptidyl-peptidase III [Stigmatella
aurantiaca DW4/3-1]
gi|115364984|gb|EAU64038.1| putative dipeptidyl-peptidase III [Stigmatella aurantiaca DW4/3-1]
gi|309392696|gb|ADO70155.1| Peptidase M49 family protein, dipeptidyl-peptidase III [Stigmatella
aurantiaca DW4/3-1]
Length = 709
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 156/351 (44%), Gaps = 28/351 (7%)
Query: 402 YNSYLTRASELLHKAGDMASSPS-LKRLLHSKADAFLSNNYYD---SDIAWIELDSELDV 457
Y L R + L +A M S+P K +L A F + N D +IAW++ + +D
Sbjct: 250 YAVELGRVVDHLEEA--MKSAPKDQKAVLGKLARYFQTGNPKDWEAFNIAWVKANPRVDA 307
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
T+G ETY D + G K +E + RD + ++L G Q E+ +P AYK K V
Sbjct: 308 TLGFVETYVDPL-GQKGLWEGLVNYRDPQENRVMELIGKRAQYFEERMPWPQAYKRKRVS 366
Query: 518 AAPIRVIQLIYNSGDVKGPQTVA-FNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIA 576
+ I L+ PQ A NLPN++ I + G+ V++ NV E P+A
Sbjct: 367 LPVAKAIHLVATY-----PQPPAGINLPNEQHIREKYGSKSVLVANVMEVASALRRLPLA 421
Query: 577 DVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD---GRQSTVRLELQELHSAME 633
R E+ T H + H+ D G+Q R L+E + +E
Sbjct: 422 VEFSRTEEDRAQARKHSATARKWLVAFHEVLGHASGQVDKKLGKQPPSRF-LKEYDNTLE 480
Query: 634 EAKADIVGLWALKFLIGRDLLP--KSLVKSMYVSFLAGC---FRSVRFG--LEESHGKGQ 686
EA+AD+V LW +L P + + + MY FL + V G EE H +G
Sbjct: 481 EARADLVALWHAFDPALAELSPEHEQIAQQMYRDFLVEGLTNLQRVEKGDEFEEDHQRGH 540
Query: 687 ALQFNWLFEKEAF--ILHSDDTF--SVDFDKVEGAVESLSTEILTIQARGD 733
+ N+L EK + T+ VDF K+ AV L ++++ I+A GD
Sbjct: 541 HMTVNFLIEKGVVRQTVEGGRTYWGVVDFAKMREAVGELLSKLMVIKATGD 591
>gi|383113299|ref|ZP_09934072.1| hypothetical protein BSGG_3005 [Bacteroides sp. D2]
gi|313695470|gb|EFS32305.1| hypothetical protein BSGG_3005 [Bacteroides sp. D2]
Length = 682
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 188/429 (43%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF++V+K + E + L+ +V ++ + + Y + +
Sbjct: 204 QKEAESFYSVLKDPKDETPVSYGLNSRLVKENGKLTEKVWKVGGL-----YTQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + + D D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAEGVAENEAQKAVITKLIQFYETGDLKDFDEYSILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 319 PL-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDA 435
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+ +L+D S T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 436 EIQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 487
Query: 639 IVGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQ 689
+ GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 488 LFGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLI 547
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK A + T+ V D+ KV L EI I++ GD E A L+
Sbjct: 548 ARWVFEKGAADKAVELVKKDGKTYVVINDYQKVRQLFGELLAEIQRIKSTGDFEGARTLV 607
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 608 ENYAVKVDP 616
>gi|340616033|ref|YP_004734486.1| NUDIX hydrolase [Zobellia galactanivorans]
gi|339730830|emb|CAZ94094.1| NUDIX hydrolase [Zobellia galactanivorans]
Length = 182
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G+ TG T +SE HR G +H TV+ W++ + LLLQ+RA KD P +
Sbjct: 2 DELIDILDSEGKPTGKTAMKSEAHRKGWFHPTVHIWLYT-ANGRLLLQQRARTKDIHPLL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGHI AG++ ISA RE+QEE+G+ +P +A E + F +D + ++ EF
Sbjct: 61 WDVSVAGHIGAGEAIEISAIREIQEEIGLTVPPEALEKIGVFKSMQKPSD-ELMDYEFHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
+L PL Q++EV +K I+
Sbjct: 120 TFLCELKE--PLHHLKKQESEVEDLKLIS 146
>gi|225574605|ref|ZP_03783215.1| hypothetical protein RUMHYD_02682 [Blautia hydrogenotrophica DSM
10507]
gi|225038219|gb|EEG48465.1| hydrolase, NUDIX family [Blautia hydrogenotrophica DSM 10507]
Length = 342
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWPG 66
E +VL G G K RS VHR GD+H TV+ WI E+ ELL Q+R++ K+S+PG
Sbjct: 158 ELFEVLNEDGSSAGRIKERSLVHRDGDWHGTVHTWIVRRRENEWELLFQKRSEQKESFPG 217
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND---GK-FIN 122
+DISSAGH AG+ +L +A REL+EELG+ + + EF+ L++ V+ + GK + +
Sbjct: 218 KYDISSAGHRQAGEDALAAAVRELREELGLCVKPEDLEFL--RLRKGVVQENFHGKPYYD 275
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
E A +YL P+ + Q EV +V +++ + + + D +
Sbjct: 276 REIASLYLYE--KPMDTKKLVFQDGEVESVHWVSLKVCREEILAGDSRYC 323
>gi|357054196|ref|ZP_09115287.1| hypothetical protein HMPREF9467_02259 [Clostridium clostridioforme
2_1_49FAA]
gi|355385081|gb|EHG32134.1| hypothetical protein HMPREF9467_02259 [Clostridium clostridioforme
2_1_49FAA]
Length = 344
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDS 63
Q E DVL G+KTG+ + RS VH G H T + W+ + T +LLLQ+R+ KDS
Sbjct: 157 QMELFDVLDEDGRKTGVVRERSLVHMDGVPHGTAHIWVVRKNGDKTYDLLLQKRSRGKDS 216
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV--FTFLQQNVINDGKFI 121
+PG +DISSAGH+ AGD L SA REL+EELGI ++ EF +++ F
Sbjct: 217 YPGCYDISSAGHVQAGDEFLPSAVRELKEELGIEAREEDLEFAGFHKGYMEDMFYGSMFR 276
Query: 122 NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYI 155
++E + VY+ + + TLQ+ EV +V ++
Sbjct: 277 DSEVSAVYVYR--KTVDADQLTLQKEEVESVMWM 308
>gi|170760156|ref|YP_001786153.1| isopentenyl-diphosphate delta-isomerase [Clostridium botulinum A3
str. Loch Maree]
gi|169407145|gb|ACA55556.1| isopentenyl-diphosphate delta-isomerase family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 175
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E +D+ GQK G T+ + E H+ H+ V WI S E+LLQ R + + +P M
Sbjct: 2 EMIDIYDELGQKCGKTEGKYEAHKKALIHKGVCVWII-NSNDEILLQTRNN-QVMFPNMM 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DIS +GHI AG++SL +A RE +EELGI+L D +++F+ + + DG +I NE DV
Sbjct: 60 DISFSGHIQAGETSLEAAIREGKEELGIDLEIDKLQYLFSCREYGEV-DG-YIENEIDDV 117
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+L T I LE ++ EV V Y++ E++K ++ +PY
Sbjct: 118 FLYRT--DILLEEYSFYDNEVKEVSYVSLEKFKIMVETHSTMLMPY 161
>gi|336173888|ref|YP_004581026.1| NUDIX hydrolase [Lacinutrix sp. 5H-3-7-4]
gi|334728460|gb|AEH02598.1| NUDIX hydrolase [Lacinutrix sp. 5H-3-7-4]
Length = 182
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+++ TG+ TG T +S +H G YH TV+ W F +T E+LLQ+RA K P +
Sbjct: 2 DELIDIVSNTGETTGKTALKSVIHSKGLYHNTVHIW-FYTTTGEILLQQRAATKAICPLL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGHI AG++ A RE++EE+G+++ +D + TF ++G I+NEF
Sbjct: 61 WDVSVAGHIDAGETLKKGATREIEEEIGLSICEDDLTKIGTFKCFKKYDNG-IIDNEFHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL--AKDDPSFV 172
Y+ + + T Q+ EV A+K ++ E ++ LL +K + FV
Sbjct: 120 TYIAQL--KVDINKLTPQKEEVEALKLVSTETFQKLLNHSKTNGHFV 164
>gi|154491516|ref|ZP_02031142.1| hypothetical protein PARMER_01127 [Parabacteroides merdae ATCC
43184]
gi|154088317|gb|EDN87362.1| peptidase family M49 [Parabacteroides merdae ATCC 43184]
Length = 685
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 61/405 (15%)
Query: 397 PYSEEYNSYLTRAS----ELLHKAGDMASSPSLKRLLH--SKADAFLSNN---------- 440
P S NS L + + E + K G + SP+L++++ KA AF N+
Sbjct: 225 PISYGLNSRLVKENGKLVEKVWKVGGL-YSPALEKIVSELQKAVAFAENDAQKSIIGKLI 283
Query: 441 -YYDS---------DIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
YY + I W+E S++D G ETY D + G KA++E+ + + +AT
Sbjct: 284 EYYQTGDLKIFDAYSILWVEDTASDVDFVNGFIETYGDPL-GMKASWESTVNFINKEATK 342
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ K+ DN Q E + P+D +K + V +VI + GD + NLPN + I
Sbjct: 343 RTKVISDNAQWFEDHSPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWI 402
Query: 550 VKDRGTSMVMLKNVSEAKFK-NILRPIAD--VCIRKEQQELVDFDSFFTHNI---CHECC 603
+D G+ V ++N++EA K + D V KE++ L + F T+N+ HEC
Sbjct: 403 RRDHGSKSVTIENITEAYDKASQGNGFNDEFVWSDKEREGLKKY-GFITNNLHTDLHECL 461
Query: 604 -HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LV 659
HG G LPD L+ S +EEA+AD+ GL+ L L+ L+P +
Sbjct: 462 GHGSGK---LLPDTDPDA----LKAYSSTLEEARADLFGLYYLGDAKLVELGLVPDAEAY 514
Query: 660 KSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFNWLFEK----EAFILHSDD--TF 707
K+ Y ++ + VR +EE+H + + L W++EK L D T+
Sbjct: 515 KAEYYKYIMNGLMTQLVRIEQGKNVEEAHMRNRQLIAKWVYEKGKADNVIELKQRDGKTY 574
Query: 708 SV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
V D+ K+ +L E+ I++ GD A L+++Y P
Sbjct: 575 VVVNDYAKLRELFGTLLAEVQRIKSEGDFSAGKKLVEEYAVKVDP 619
>gi|423724652|ref|ZP_17698794.1| hypothetical protein HMPREF1078_02691 [Parabacteroides merdae
CL09T00C40]
gi|409236612|gb|EKN29418.1| hypothetical protein HMPREF1078_02691 [Parabacteroides merdae
CL09T00C40]
Length = 677
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 61/405 (15%)
Query: 397 PYSEEYNSYLTRAS----ELLHKAGDMASSPSLKRLLH--SKADAFLSNN---------- 440
P S NS L + + E + K G + SP+L++++ KA AF N+
Sbjct: 217 PISYGLNSRLVKENGKLVEKVWKVGGL-YSPALEKIVSELQKAVAFAENDAQKSIIGKLI 275
Query: 441 -YYDS---------DIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
YY + I W+E S++D G ETY D + G KA++E+ + + +AT
Sbjct: 276 EYYQTGDLKIFDAYSILWVEDTASDVDFVNGFIETYGDPL-GMKASWESTVNFINKEATK 334
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ K+ DN Q E + P+D +K + V +VI + GD + NLPN + I
Sbjct: 335 RTKVISDNAQWFEDHSPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWI 394
Query: 550 VKDRGTSMVMLKNVSEAKFK-NILRPIAD--VCIRKEQQELVDFDSFFTHNI---CHECC 603
+D G+ V ++N++EA K + D V KE++ L + F T+N+ HEC
Sbjct: 395 RRDHGSKSVTIENITEAYDKASQGNGFNDEFVWSDKEREGLKKY-GFITNNLHTDLHECL 453
Query: 604 -HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LV 659
HG G LPD L+ S +EEA+AD+ GL+ L L+ L+P +
Sbjct: 454 GHGSGK---LLPDTDPDA----LKAYSSTLEEARADLFGLYYLGDAKLVELGLVPDAEAY 506
Query: 660 KSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFNWLFEK----EAFILHSDD--TF 707
K+ Y ++ + VR +EE+H + + L W++EK L D T+
Sbjct: 507 KAEYYKYIMNGLMTQLVRIEQGKNVEEAHMRNRQLIAKWVYEKGKADNVIELKQRDGKTY 566
Query: 708 SV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
V D+ K+ +L E+ I++ GD A L+++Y P
Sbjct: 567 VVVNDYAKLRELFGTLLAEVQRIKSEGDFSAGKKLVEEYAVKVDP 611
>gi|160886581|ref|ZP_02067584.1| hypothetical protein BACOVA_04592 [Bacteroides ovatus ATCC 8483]
gi|423289733|ref|ZP_17268583.1| hypothetical protein HMPREF1069_03626 [Bacteroides ovatus
CL02T12C04]
gi|156108466|gb|EDO10211.1| peptidase family M49 [Bacteroides ovatus ATCC 8483]
gi|392667444|gb|EIY60954.1| hypothetical protein HMPREF1069_03626 [Bacteroides ovatus
CL02T12C04]
Length = 682
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 41/368 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A S + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 260 LKKAEGVAESEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 319
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 320 L-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAI 378
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K N + +
Sbjct: 379 LAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNE--EFVYSDAE 436
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADI 639
+L+D S T H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 437 IQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADL 488
Query: 640 VGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQF 690
GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 489 FGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLIA 548
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ KV L EI I++ GD E A L++
Sbjct: 549 RWVFEKGAADKAVELVKKDGKTYVVINDYQKVRQLFGELLAEIQRIKSTGDFEGARTLVE 608
Query: 743 KYCTMTQP 750
Y P
Sbjct: 609 NYAVKVDP 616
>gi|239625588|ref|ZP_04668619.1| NUDIX hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239519818|gb|EEQ59684.1| NUDIX hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 344
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 11/154 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA---ESTQELLLQRRADFKDSWP 65
E D+ GQ+TG+ + R VH GD H T + WI + ++LLQ+R+ KDS+P
Sbjct: 159 ELFDIRDGEGQRTGMVRERIMVHMDGDLHGTAHTWIVRGRRDGGFDILLQKRSQGKDSYP 218
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND---GK-FI 121
G +DISSAGH+ AGD L +A REL+EELGI DA + F + + + + GK F
Sbjct: 219 GCFDISSAGHVQAGDDFLPTALRELEEELGIQ--ADAGQLEFAGVHKGYMEEEFYGKMFR 276
Query: 122 NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYI 155
++E++ VY+ P+ ++ LQ+ EV +V ++
Sbjct: 277 DSEYSHVYVYR--EPVDIQGLKLQKEEVESVMWM 308
>gi|333029865|ref|ZP_08457926.1| Dipeptidyl-peptidase III [Bacteroides coprosuis DSM 18011]
gi|332740462|gb|EGJ70944.1| Dipeptidyl-peptidase III [Bacteroides coprosuis DSM 18011]
Length = 682
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 155/337 (45%), Gaps = 37/337 (10%)
Query: 440 NYYDSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
++ D I W+ +LDS +D G ETY D + G KA++E+ + +D +AT + + N
Sbjct: 291 DFNDYSIQWVKDLDSRVDFVNGFTETYGDPL-GLKASWESLVNFKDLEATRRTETISANA 349
Query: 499 QVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMV 558
Q E N P+D +K ++V +VI +GD+ + NLPN I G+ V
Sbjct: 350 QWFEDNSPVDKQFKKEEVKGVSAKVITAAILAGDLYPATAIGINLPNANWIRSHYGSKSV 409
Query: 559 MLKNVSEAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHS 610
+ N+++A K N + + +L+D + T H HEC HG G
Sbjct: 410 TIGNITDAYNKAAHGNGFNE--EFVYSNVELDLIDRYADMTDDLHTDIHECLGHGSGK-- 465
Query: 611 ITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPK--SLVKSMYVSF 666
+P G++ L+ S +EEA+AD+ GL+ L L+ L+P + + + Y
Sbjct: 466 -VMP-GKEDA----LKAYGSTIEEARADLFGLYYLGDNKLVELGLVPNNDAYLAAYYNYM 519
Query: 667 LAGCFRS-VRFGL----EESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDK 713
+ G VR L EE+H + + L W ++K + T+ V D++K
Sbjct: 520 MNGLMTQLVRIELGNTVEEAHMRNRQLIAQWAYQKGKADKVVELVKKEGKTYVVVNDYEK 579
Query: 714 VEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
+ G L EI I++ GD EAA +++ Y P
Sbjct: 580 LRGLFGELLAEIQRIRSTGDFEAARTMVETYAVNVDP 616
>gi|298480718|ref|ZP_06998914.1| peptidase, M49 family [Bacteroides sp. D22]
gi|336406154|ref|ZP_08586815.1| hypothetical protein HMPREF0127_04128 [Bacteroides sp. 1_1_30]
gi|298273152|gb|EFI14717.1| peptidase, M49 family [Bacteroides sp. D22]
gi|335935403|gb|EGM97355.1| hypothetical protein HMPREF0127_04128 [Bacteroides sp. 1_1_30]
Length = 682
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 187/428 (43%), Gaps = 45/428 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF++ +K + E + L+ +V ++ + + Y + +
Sbjct: 204 QKEAESFYSALKDPKDETPVSYGLNSRLVKENGKLEEKVWKVGGL-----YTQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 319 PL-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDA 435
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADI 639
+ +L+D S T H HEC HG G LP+ L+ S +EEA+AD+
Sbjct: 436 EIQLIDAYSDLTDELHTDLHECLGHGSGK---LLPEVDPDA----LKAYGSTIEEARADL 488
Query: 640 VGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQF 690
GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 489 FGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQLIA 548
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ KV L EI I++ GD E A L++
Sbjct: 549 RWVFEKGAADKVVELVKKDGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARSLVE 608
Query: 743 KYCTMTQP 750
Y P
Sbjct: 609 NYAVKVDP 616
>gi|225569223|ref|ZP_03778248.1| hypothetical protein CLOHYLEM_05305 [Clostridium hylemonae DSM
15053]
gi|225162022|gb|EEG74641.1| hypothetical protein CLOHYLEM_05305 [Clostridium hylemonae DSM
15053]
Length = 339
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 7/161 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWP 65
E DV G +GI + R HR G H TV+ W+ E+ + ++LLQ+R+ KDS P
Sbjct: 157 ELFDVRNPDGSPSGIVRERGVAHREGSLHATVHIWVVRENDKSGFDVLLQKRSASKDSHP 216
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ--QNVINDGKFINN 123
G +DISSAGHI+AG+ L SA REL EELGI+ + ++V ++V F +
Sbjct: 217 GFYDISSAGHIAAGEDYLPSAVRELSEELGISASESELQYVGIHRGGFEDVFYGRPFKDE 276
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
E + VY+ P+ LQ++EV V +I YEE + +
Sbjct: 277 ELSAVYVYA--EPVRAGELRLQESEVEEVVWIDYEECRKRM 315
>gi|153809528|ref|ZP_01962196.1| hypothetical protein BACCAC_03846 [Bacteroides caccae ATCC 43185]
gi|149127836|gb|EDM19059.1| peptidase family M49 [Bacteroides caccae ATCC 43185]
Length = 682
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 167/372 (44%), Gaps = 47/372 (12%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 260 LKKAETVAENEAQKAVISKLIRFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 319
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D A+K +V +VI
Sbjct: 320 L-GMKASWESLVNFKDIESTHRTEIISSNAQWFEDHSPVDKAFKKDEVKGVSAKVITAAI 378
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK-------NILRPIADVCIR 581
+GD+ + NLPN I G+ V + N+++A K N +D I+
Sbjct: 379 LAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNEEFVYSDAEIK 438
Query: 582 KEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAK 636
L+D + T H HEC HG G + PD L+ S +EEA+
Sbjct: 439 -----LIDTYADLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEAR 485
Query: 637 ADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCFRS--VRF----GLEESHGKGQA 687
AD+ GL+ + K + + L K+ Y ++L + VR +EE+H + +
Sbjct: 486 ADLFGLYYVADPKLVELKLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQ 545
Query: 688 LQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASL 739
L W+FEK A + T+ V D+ KV L EI I++ GD E A
Sbjct: 546 LIARWVFEKGAADKVVEMVKKDGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARA 605
Query: 740 LLQKYCTMTQPL 751
L++ Y P+
Sbjct: 606 LVENYAVKVDPV 617
>gi|371778016|ref|ZP_09484338.1| dipeptidyl-peptidase III [Anaerophaga sp. HS1]
Length = 650
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 210/453 (46%), Gaps = 41/453 (9%)
Query: 353 QEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASEL 412
Q++A +F+ K + L L+ ++ ++ + E Y++ + + E
Sbjct: 179 QQEAEAFYADRKNKDNL-LSHGLNTQLIKEDGQIKEKVWKI-----GEMYSTAIEKIVEW 232
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + K+++ D + + + + + +IAW+ + DS +D G ETY D
Sbjct: 233 LDKAMTVAENDRHKKVIRLLIDFYKTGDLKVFNEYNIAWLADQDSAVDFINGFIETYGDP 292
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G K ++E+ + ++ +AT + ++ N Q E + P+D +K + V +VI +
Sbjct: 293 L-GLKGSWESVVNFKNKEATRRTEIISANAQWFEDHSPVDPRFKKEKVRGVSAKVINVAM 351
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA--KFKNILRPIADVCIRKEQQE 586
GD + NLPN + I K+ G+ V ++N++ A + + + C +E+ +
Sbjct: 352 LGGDCYPHTPIGINLPNADWIRKEYGSKSVTIENITYAYDQASKGTGFLEEFCFSQEEID 411
Query: 587 LVDFDSFFTHNI---CHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLW 643
F T N+ HEC +G S L +G EL+ + +EEA+AD+ L+
Sbjct: 412 RYYGYGFLTGNLHTDLHEC---LGHGSGQLLEGITGN---ELKAYGAVIEEARADLFALY 465
Query: 644 --ALKFLIGRDLLP-KSLVKSMYVSFLAGCFRS----VRFG--LEESHGKGQALQFNWLF 694
A K L+ +LLP + K+ Y +++ + +R G +EE H + + L W F
Sbjct: 466 YIADKKLVELNLLPDEEAYKAEYDTYIRNGLMTQLTRIRLGEDIEEPHMRNRQLIAAWCF 525
Query: 695 E---KEAFILHSD---DTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCT 746
E K+ I + TF V D+ + L EI +++ GD A+ L++ Y
Sbjct: 526 EKGQKDKVIERKNKDGKTFFVINDYIALRNLFAKLLAEIQRVKSEGDYHTANHLVETYGV 585
Query: 747 MTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
++ + LE Q +++AP VN +L+
Sbjct: 586 KVNK-ELHQEVLERYQ-KLNLAPYSGFVNPVLR 616
>gi|423219541|ref|ZP_17206037.1| hypothetical protein HMPREF1061_02810 [Bacteroides caccae
CL03T12C61]
gi|392624746|gb|EIY18824.1| hypothetical protein HMPREF1061_02810 [Bacteroides caccae
CL03T12C61]
Length = 675
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 165/371 (44%), Gaps = 45/371 (12%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 253 LKKAETVAENEAQKAVISKLIRFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 312
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D A+K +V +VI
Sbjct: 313 L-GMKASWESLVNFKDIESTHRTEIISSNAQWFEDHSPVDKAFKKDEVKGVSAKVITAAI 371
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK---------NILRPIADVC 579
+GD+ + NLPN I G+ V + N+++A K + A++
Sbjct: 372 LAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNEEFVYSDAEIK 431
Query: 580 IRKEQQELVDFDSFFTHNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKA 637
+ +L D H HEC HG G + PD L+ S +EEA+A
Sbjct: 432 LIDTYADLTD----ELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARA 479
Query: 638 DIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCFRS--VRF----GLEESHGKGQAL 688
D+ GL+ + K + + L K+ Y ++L + VR +EE+H + + L
Sbjct: 480 DLFGLYYVADPKLVELKLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQL 539
Query: 689 QFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLL 740
W+FEK A + T+ V D+ KV L EI I++ GD E A L
Sbjct: 540 IARWVFEKGAADKVVEMVKKDGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARAL 599
Query: 741 LQKYCTMTQPL 751
++ Y P+
Sbjct: 600 VENYAVKVDPV 610
>gi|260063152|ref|YP_003196232.1| MutT (Nudix) family hydrolase [Robiginitalea biformata HTCC2501]
gi|88782857|gb|EAR14032.1| Hydrolase of MutT (Nudix) family protein [Robiginitalea biformata
HTCC2501]
Length = 182
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+ G TG T +SE HR G YH TV+ W F S +LLQRRA+ K + PG+
Sbjct: 2 DERIDIWDADGNPTGKTALKSEAHREGWYHPTVHVW-FYTSDGRVLLQRRAEDKATDPGV 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGH+ AG+S L A RE++EE+G+ + D T ++ + + G + EF
Sbjct: 61 WDVSVAGHVGAGESPLEGAVREIREEIGLEVSADQL-IPITTVKDSRDHPGGIRDREFRH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
VYL P A T QQ+EV+ ++ I ++
Sbjct: 120 VYLCRLSQ--PFGALTPQQSEVAELRLIPLLQF 150
>gi|295085100|emb|CBK66623.1| Peptidase family M49. [Bacteroides xylanisolvens XB1A]
Length = 682
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 187/429 (43%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF++ +K + E + L+ +V ++ + + Y + +
Sbjct: 204 QKEAESFYSALKDPKDETPVSYGLNSRLVKENGKLEEKVWKVGGL-----YTQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 319 PL-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNE--EFVYSDA 435
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+ +L+D S T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 436 EIQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 487
Query: 639 IVGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQ 689
+ GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 488 LFGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQLI 547
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK A + T+ V D+ KV L EI I++ GD E A L+
Sbjct: 548 ARWVFEKGAADKVVELVKKGGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARSLV 607
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 608 ENYAVKVDP 616
>gi|386821158|ref|ZP_10108374.1| isopentenyldiphosphate isomerase [Joostella marina DSM 19592]
gi|386426264|gb|EIJ40094.1| isopentenyldiphosphate isomerase [Joostella marina DSM 19592]
Length = 183
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G TG +SE H+ G +H T + W++ + + L+ +R AD K ++P
Sbjct: 2 DELVDILDSEGNATGKVLLKSEAHKKGLFHPTAHVWLYTQEGKVLIQKRVAD-KKTFPNK 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGHISAG+++ +SA RE+QEE+G+ + + E + + +V++ I+ EF
Sbjct: 61 WDVSVAGHISAGETAEVSAVREVQEEIGLTISEKDLEKIGVH-RSSVVHSKDVIDCEFHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVK 153
++LV PLE +LQ++EV+ +K
Sbjct: 120 IFLVELKQ--PLETLSLQESEVAEIK 143
>gi|423216122|ref|ZP_17202647.1| hypothetical protein HMPREF1074_04179 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690973|gb|EIY84224.1| hypothetical protein HMPREF1074_04179 [Bacteroides xylanisolvens
CL03T12C04]
Length = 682
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 187/429 (43%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF++ +K + E + L+ +V ++ + + Y + +
Sbjct: 204 QKEAESFYSALKDPKDETPVSYGLNSRLVKENGKLEEKVWKVGGL-----YTQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 319 PL-GMKASWESLVNFKDLESTRRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNE--EFVYSDA 435
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+ +L+D S T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 436 EIQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 487
Query: 639 IVGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQ 689
+ GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 488 LFGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQLI 547
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK A + T+ V D+ KV L EI I++ GD E A L+
Sbjct: 548 ARWVFEKGAADKVVELVKKDGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARSLV 607
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 608 ENYAVKVDP 616
>gi|237723402|ref|ZP_04553883.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|423298261|ref|ZP_17276320.1| hypothetical protein HMPREF1070_04985 [Bacteroides ovatus
CL03T12C18]
gi|229447924|gb|EEO53715.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|392663677|gb|EIY57225.1| hypothetical protein HMPREF1070_04985 [Bacteroides ovatus
CL03T12C18]
Length = 682
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 41/368 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 260 LKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 319
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 320 L-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAI 378
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K N + +
Sbjct: 379 LAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDAE 436
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADI 639
+L+D S T H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 437 IQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADL 488
Query: 640 VGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQF 690
GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 489 FGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLIA 548
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ KV L EI I++ GD E A L++
Sbjct: 549 RWVFEKGAVDKAVELVKKDGKTYVVINDYQKVRQLFGELLAEIQRIKSTGDFEGARTLVE 608
Query: 743 KYCTMTQP 750
Y P
Sbjct: 609 NYAVKVDP 616
>gi|293373223|ref|ZP_06619585.1| peptidase family M49 [Bacteroides ovatus SD CMC 3f]
gi|292631871|gb|EFF50487.1| peptidase family M49 [Bacteroides ovatus SD CMC 3f]
Length = 675
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 41/368 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 253 LKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 312
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 313 L-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAI 371
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K N + +
Sbjct: 372 LAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDAE 429
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADI 639
+L+D S T H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 430 IQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADL 481
Query: 640 VGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQF 690
GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 482 FGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLIA 541
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ KV L EI I++ GD E A L++
Sbjct: 542 RWVFEKGAVDKAVELVKKDGKTYVVINDYQKVRQLFGELLAEIQRIKSTGDFEGARTLVE 601
Query: 743 KYCTMTQP 750
Y P
Sbjct: 602 NYAVKVDP 609
>gi|423347135|ref|ZP_17324822.1| hypothetical protein HMPREF1060_02494 [Parabacteroides merdae
CL03T12C32]
gi|409218392|gb|EKN11363.1| hypothetical protein HMPREF1060_02494 [Parabacteroides merdae
CL03T12C32]
Length = 677
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 185/405 (45%), Gaps = 61/405 (15%)
Query: 397 PYSEEYNSYLTRAS----ELLHKAGDMASSPSLKRLLH--SKADAFLSNN---------- 440
P S NS L + + E + K G + SP++++++ KA AF N+
Sbjct: 217 PISYGLNSRLVKENGKLVEKVWKVGGL-YSPAIEKIVSELQKATAFAENDAQKSIIGKLI 275
Query: 441 -YYDS---------DIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
YY + I W+E S++D G ETY D + G KA++E+ + + +AT
Sbjct: 276 EYYQTGDLKIFDAYSILWVEDTVSDVDFVNGFIETYGDPL-GMKASWESTVNFINKEATK 334
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ K+ DN Q E + P+D +K + V +VI + GD + NLPN + I
Sbjct: 335 RTKVISDNAQWFEDHSPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWI 394
Query: 550 VKDRGTSMVMLKNVSEAKFK-NILRPIAD--VCIRKEQQELVDFDSFFTHNI---CHECC 603
+D G+ V ++N++EA K + D V KE++ L + F T N+ HEC
Sbjct: 395 RRDHGSKSVTIENITEAYDKASQGNGFNDEFVWSDKEREGLKKY-GFITDNLHTDLHECL 453
Query: 604 -HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LV 659
HG G LPD L+ S +EEA+AD+ GL+ L L+ L+P +
Sbjct: 454 GHGSGK---LLPDTDPDA----LKAYSSTLEEARADLFGLYYLGDAKLVELGLVPDAEAY 506
Query: 660 KSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFNWLFEK----EAFILHSDD--TF 707
K+ Y ++ + VR +EE+H + + L W++EK L D T+
Sbjct: 507 KAEYYKYIMNGLMTQLVRIEQGKNVEEAHMRNRQLIAKWVYEKGKVDNVIELKQRDGKTY 566
Query: 708 SV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
V D+ K+ +L E+ I++ GD A L+++Y P
Sbjct: 567 VVVNDYAKLRELFGTLLAEVQRIKSEGDFSAGKKLVEEYAVKVDP 611
>gi|336417151|ref|ZP_08597480.1| hypothetical protein HMPREF1017_04588 [Bacteroides ovatus
3_8_47FAA]
gi|335936776|gb|EGM98694.1| hypothetical protein HMPREF1017_04588 [Bacteroides ovatus
3_8_47FAA]
Length = 682
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 41/368 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 260 LKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGDP 319
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 320 L-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAI 378
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K N + +
Sbjct: 379 LAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDAE 436
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADI 639
+L+D S T H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 437 IQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADL 488
Query: 640 VGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQF 690
GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 489 FGLYYVADPKLVELGLLSSPDAYKAQYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLIA 548
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ KV L EI I++ GD E A L++
Sbjct: 549 RWVFEKGAADKAVELVKKDGKTYVVINDYQKVRQLFGELLAEIQRIKSTGDFEGARTLVE 608
Query: 743 KYCTMTQP 750
Y P
Sbjct: 609 NYAVKVDP 616
>gi|329955318|ref|ZP_08296226.1| peptidase family M49 [Bacteroides clarus YIT 12056]
gi|328525721|gb|EGF52745.1| peptidase family M49 [Bacteroides clarus YIT 12056]
Length = 682
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 43/427 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A +F+ +K + E + L+ +V ++ + + Y + +
Sbjct: 204 QKEAEAFYNAMKDPKDETPVSYGLNSRLVKENGKIQEKVWKVGGL-----YGQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDSELDVTIGPYETYED 467
L KA +A +P K ++ + + + + + D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAEGVAENPEQKAVIAKLIEFYETGDLKTFDDYAILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D +AT + ++ N Q E + P++ +K + V +VI
Sbjct: 319 PL-GMKASWESLVNFKDLEATRRTEIISSNAQWFEDHSPVEKQFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQEL 587
+GD+ + NLPN I G+ V + N+++A K + EL
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFNEEFVYSDAEL 437
Query: 588 VDFDSFF-----THNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADIV 640
D + H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 438 QLIDKYADTTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADLF 489
Query: 641 GLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFN 691
GL+ A L+ L P + K+ Y ++L + VR +EE+H + + L
Sbjct: 490 GLYYVADPKLVELGLTPNADAYKAQYYTYLMNGLMTQLVRIEPGNNVEEAHMRNRQLIAR 549
Query: 692 WLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
W++EK A + T+ V D+ KV L EI I++ GD EAA L++
Sbjct: 550 WVYEKGAADKVVELVKKDGKTYVVINDYGKVRELFGELLAEIQRIKSTGDYEAAHKLVEA 609
Query: 744 YCTMTQP 750
Y P
Sbjct: 610 YAVKVDP 616
>gi|153810416|ref|ZP_01963084.1| hypothetical protein RUMOBE_00797 [Ruminococcus obeum ATCC 29174]
gi|149833595|gb|EDM88676.1| hydrolase, NUDIX family [Ruminococcus obeum ATCC 29174]
Length = 186
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWP 65
EE D++ G TG T R + H G HRT + WI E E+LLQ+R+ KDS+P
Sbjct: 2 EEIFDIIDTQGNPTGETVTREKAHAEGIPHRTAHIWIIREKYGRTEVLLQKRSMNKDSFP 61
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINN 123
G +D SSAGHI AGD L SA REL EELGI + F TF + F +
Sbjct: 62 GKFDTSSAGHIQAGDEPLESALRELGEELGIQATPEQLVFAGTFPISFAKEFHGKMFRDE 121
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
E A VY+ P+ + LQ+ EV AV++ A EE
Sbjct: 122 ELAFVYIYD--QPVDIADLVLQKEEVEAVEWFALEE 155
>gi|423343335|ref|ZP_17321049.1| hypothetical protein HMPREF1077_02479 [Parabacteroides johnsonii
CL02T12C29]
gi|409215776|gb|EKN08770.1| hypothetical protein HMPREF1077_02479 [Parabacteroides johnsonii
CL02T12C29]
Length = 677
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 184/405 (45%), Gaps = 61/405 (15%)
Query: 397 PYSEEYNSYLTRAS----ELLHKAGDMASSPSLKRLLH--SKADAFLSNN---------- 440
P S NS L + + E + K G + SP++++++ KA AF N+
Sbjct: 217 PISYGLNSRLVKENGKLVEKVWKVGGL-YSPAIEKIVSELQKAVAFAENDAQKAIIGKLI 275
Query: 441 -YYDS---------DIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
YY + I W+E S++D G ETY D + G KA++E+ + + +AT
Sbjct: 276 EYYQTGDLKTFDVYSILWVEDTVSDVDFVNGFIETYGDPL-GMKASWESTVNFINKEATK 334
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ K+ DN Q E + P+D +K + V +VI + GD + NLPN + I
Sbjct: 335 RTKVISDNAQWFEDHSPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWI 394
Query: 550 VKDRGTSMVMLKNVSEAKFKNILRPIAD---VCIRKEQQELVDFDSFFTHNI---CHECC 603
+D G+ V ++N++EA K + V KE++ L + F T N+ HEC
Sbjct: 395 RRDHGSKSVTIENITEAYDKASQGNGFNEEFVWSGKEREGLKKY-GFITDNLHTDLHECL 453
Query: 604 -HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LV 659
HG G LPD L+ S +EEA+AD+ GL+ L L+ L+P +
Sbjct: 454 GHGSGK---LLPDTDPDA----LKAYSSTLEEARADLFGLYYLGDTKLVELGLVPDAEAY 506
Query: 660 KSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFNWLFEK----EAFILHSDD--TF 707
K+ Y ++ + VR +EE+H + + L W++EK L D T+
Sbjct: 507 KAEYYKYIMNGLMTQLVRIEQGKNVEEAHMRNRQLIAKWVYEKGKADNVIELKRRDGKTY 566
Query: 708 SV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
V D+ K+ +L E+ I++ GD A L+++Y P
Sbjct: 567 VVVGDYAKLRELFGTLLAEVQRIKSEGDFAAGKKLVEEYAVKVDP 611
>gi|218263558|ref|ZP_03477639.1| hypothetical protein PRABACTJOHN_03327 [Parabacteroides johnsonii
DSM 18315]
gi|218222681|gb|EEC95331.1| hypothetical protein PRABACTJOHN_03327 [Parabacteroides johnsonii
DSM 18315]
Length = 685
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 184/405 (45%), Gaps = 61/405 (15%)
Query: 397 PYSEEYNSYLTRAS----ELLHKAGDMASSPSLKRLLH--SKADAFLSNN---------- 440
P S NS L + + E + K G + SP++++++ KA AF N+
Sbjct: 225 PISYGLNSRLVKENGKLVEKVWKVGGL-YSPAIEKIVSELQKAVAFAENDAQKAIIGKLI 283
Query: 441 -YYDS---------DIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
YY + I W+E S++D G ETY D + G KA++E+ + + +AT
Sbjct: 284 EYYQTGDLKTFDVYSILWVEDTASDVDFVNGFIETYGDPL-GMKASWESTVNFINKEATK 342
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ K+ DN Q E + P+D +K + V +VI + GD + NLPN + I
Sbjct: 343 RTKVISDNAQWFEDHSPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWI 402
Query: 550 VKDRGTSMVMLKNVSEAKFKNILRPIAD---VCIRKEQQELVDFDSFFTHNI---CHECC 603
+D G+ V ++N++EA K + V KE++ L + F T N+ HEC
Sbjct: 403 RRDHGSKSVTIENITEAYDKASQGNGFNEEFVWSDKEREGLKKY-GFITDNLHTDLHECL 461
Query: 604 -HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LV 659
HG G LPD L+ S +EEA+AD+ GL+ L L+ L+P +
Sbjct: 462 GHGSGK---LLPDTDPDA----LKAYSSTLEEARADLFGLYYLGDTKLVELGLVPDAEAY 514
Query: 660 KSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFNWLFEK----EAFILHSDD--TF 707
K+ Y ++ + VR +EE+H + + L W++EK L D T+
Sbjct: 515 KAEYYKYIMNGLMTQLVRIEQGKNVEEAHMRNRQLIAKWVYEKGKADNVIELKRRDGKTY 574
Query: 708 SV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
V D+ K+ +L E+ I++ GD A L+++Y P
Sbjct: 575 VVVGDYAKLRELFGTLLAEVQRIKSEGDFAAGKKLVEEYAVKVDP 619
>gi|423298846|ref|ZP_17276871.1| hypothetical protein HMPREF1057_00012 [Bacteroides finegoldii
CL09T03C10]
gi|408474195|gb|EKJ92714.1| hypothetical protein HMPREF1057_00012 [Bacteroides finegoldii
CL09T03C10]
Length = 675
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 151/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 289 ILWVKDLDSRIDFVNGFTESYGDPL-GMKASWESLVNFKDLEATRRTEIISSNAQWFEDH 347
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++K +V +VI +GD+ + NLPN I G+ V + N++
Sbjct: 348 SPVDKSFKKDEVKGVSAKVITAAILAGDLYPSTAIGINLPNANWIRAHHGSKSVTIGNIT 407
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D S T H HEC HG G + PD
Sbjct: 408 DAYNKAAHGNGFNE--EFVYSDAERQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPD 465
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ + K + + L K+ Y ++L
Sbjct: 466 A--------LKAYGSTIEEARADLFGLYYVADPKLVELKLLSSPEAYKAQYYTYLMNGLM 517
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W++EK A + T+ V D+ KV
Sbjct: 518 TQLVRIEPGNNVEEAHMRNRQLIARWVYEKGAADKVVELVKKDGKTYVVINDYPKVRELF 577
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD E A L++ Y P
Sbjct: 578 GELLAEIQRIKSTGDFEGARSLVENYAVKVDP 609
>gi|262409279|ref|ZP_06085822.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644710|ref|ZP_06722459.1| peptidase family M49 [Bacteroides ovatus SD CC 2a]
gi|345509362|ref|ZP_08788961.1| hypothetical protein BSAG_03766 [Bacteroides sp. D1]
gi|262352731|gb|EEZ01828.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639973|gb|EFF58242.1| peptidase family M49 [Bacteroides ovatus SD CC 2a]
gi|345454813|gb|EEO52052.2| hypothetical protein BSAG_03766 [Bacteroides sp. D1]
Length = 682
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 186/429 (43%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF++ +K + E + L+ +V ++ + + Y + +
Sbjct: 204 QKEAESFYSALKDPKDETPVSYGLNSRLVKENGKLEEKVWKVGGL-----YTQAIEKIVY 258
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 259 WLKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 318
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 319 PL-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 377
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 378 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFNE--EFVYSDA 435
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+ +L+D S T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 436 EIQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 487
Query: 639 IVGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQ 689
+ GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 488 LFGLYYVADPKLVELGLLYSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQLI 547
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK A T+ V D+ KV L EI I++ GD E A L+
Sbjct: 548 ARWVFEKGAADKVVELTKKDGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARSLV 607
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 608 ENYAVKVDP 616
>gi|333379884|ref|ZP_08471602.1| hypothetical protein HMPREF9456_03197 [Dysgonomonas mossii DSM
22836]
gi|332884788|gb|EGK05044.1| hypothetical protein HMPREF9456_03197 [Dysgonomonas mossii DSM
22836]
Length = 696
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 188/422 (44%), Gaps = 41/422 (9%)
Query: 353 QEDATSFFTVIKRRSEFN-LDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++ +F+ +K ++ + L+ +V N V ++ + + Y+ + R
Sbjct: 218 QKEVQAFYGAMKDTTDQTPISYGLNSRLVKQGNKLVEDVWKVGGL-----YSPAIERIVG 272
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIE-LDSELDVTIGPYETYED 467
L KA +A + K ++ + + + D IAW+E L S++D G E Y D
Sbjct: 273 WLEKAEAVAENDQQKAVITKLISYYKTGDLKTFDEYAIAWVEDLKSQVDFVNGFTEVYGD 332
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + ++ +AT + ++ N Q E + P+D +K + V +VI +
Sbjct: 333 PL-GIKASWESVVNFKNVEATKRTEVISSNAQWFEDHSPVDKRFKKESVKGVSAKVITVA 391
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA-KFKNILRPIADVCIRKEQQ- 585
GD + NLPN + I KD G+ V ++N+ EA D + E++
Sbjct: 392 QLGGDCYPATPIGINLPNADWIRKDHGSKSVTIENIMEAYDAAGAHTGFNDEFMWSEREV 451
Query: 586 ---ELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVG 641
+ F + H HEC HG G LP+ + L E S +EEA+AD+ G
Sbjct: 452 NSVKQYGFITDVLHTDLHECLGHGSGK---LLPEVDPNA----LGEFSSTIEEARADLFG 504
Query: 642 LWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFNW 692
L+ L L+ ++P K+ Y F+ + VR +EESH + + L W
Sbjct: 505 LYFLADPKLVELGIIPNGDAYKAEYYKFMMNGLMTQLVRIEPGKNIEESHMRNRQLIAKW 564
Query: 693 LFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
++EK + + T+ V D++K+ L EI I++ GD + A +++ Y
Sbjct: 565 VYEKGKADNVVEYKVRDGKTYVVVNDYNKLRTLFGDLLAEIQRIKSEGDFKGAKAIVENY 624
Query: 745 CT 746
Sbjct: 625 AV 626
>gi|317477613|ref|ZP_07936831.1| dipeptidyl-peptidase III [Bacteroides eggerthii 1_2_48FAA]
gi|316906218|gb|EFV27954.1| dipeptidyl-peptidase III [Bacteroides eggerthii 1_2_48FAA]
Length = 682
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 41/379 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDSELDV 457
Y L + L KA +A +P K ++ + + + + + D + W+ +LDS +D
Sbjct: 249 YGQALEKIVYWLKKAEGVAENPEQKAVIAKLVEFYETGDLKTFDDYAVLWVKDLDSRIDF 308
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + ++ N Q E + P++ +K ++V
Sbjct: 309 VNGFTESYGDPL-GMKASWESLVNFKDLEATRRTEIISSNAQWFEDHSPVEKQFKKEEVK 367
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILR 573
+VI +GD+ + NLPN I G+ V + N+++A K N
Sbjct: 368 GVSAKVITAAILAGDLYPSTAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 427
Query: 574 PIADVCIRKEQQELVDFDSFFTHNI---CHECC-HGIGPHSITL-PDGRQSTVRLELQEL 628
+ + +L+D + T N+ HEC HG G + + PD L+
Sbjct: 428 E--EFVYSDAELKLIDQYADITDNLHTDLHECLGHGSGKLLLGVDPDA--------LKAY 477
Query: 629 HSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLE 679
S +EEA+AD+ GL+ A L+ L P + K+ + ++L + VR +E
Sbjct: 478 GSTIEEARADLFGLYYVADPKLVELGLTPSADAYKAQFYTYLMNGLMTQLVRIEPGNNVE 537
Query: 680 ESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQAR 731
E+H + + L W++EK A + T+ V D+ KV L EI I++
Sbjct: 538 EAHMRNRQLIARWVYEKGAADKVVELVKKDGKTYVVINDYAKVRELFGELLAEIQRIKST 597
Query: 732 GDKEAASLLLQKYCTMTQP 750
GD +AA L++ Y P
Sbjct: 598 GDYDAARKLVEAYAVKVDP 616
>gi|149924332|ref|ZP_01912701.1| putative membrane attached peptidase [Plesiocystis pacifica SIR-1]
gi|149814815|gb|EDM74384.1| putative membrane attached peptidase [Plesiocystis pacifica SIR-1]
Length = 703
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 176/397 (44%), Gaps = 39/397 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIE-LDSELDV 457
Y + + L KA +A + + +L + S + D D IAW++ S++D
Sbjct: 274 YGPAIQEIVKWLVKARSVAENDQQRAVLEKLIAYYNSGDLADFDAYNIAWVQDTKSQVDT 333
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y+DA+ GY+ ++EA + ++D +A+ ++ Q E N P+ A+K K+V+
Sbjct: 334 VNGFIEVYDDAL-GYRGSWEAVVSVKDREASERIAAISGQAQWFEDNSPLIEAHKKKNVV 392
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA--KFKNILRPI 575
+VI ++ +GD + NLPN I G+ V L N+ EA K+ +
Sbjct: 393 GVSAKVITVVVEAGDAAPSTPIGINLPNANWIRAQHGSKSVNLGNIVEAYEHAKSGNGQL 452
Query: 576 ADVCIRKEQQELVDFDSF--FTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAME 633
+ + EL F H + H H + H+ + T + L++ SA+E
Sbjct: 453 EEFTF--DDAELARAQEFGGLAHKL-HVDMHEVIGHASGQINPGVGTPKETLKQYASALE 509
Query: 634 EAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL-------------EE 680
E +AD+VGL+ +++ L+ L+ S+ V A +R GL EE
Sbjct: 510 EGRADLVGLY---YIMDPKLVELGLMPSLEVG-KAAYDEYIRNGLMVQLTRLEPGEDVEE 565
Query: 681 SHGKGQALQFNWLFEKEAF------ILHSDDTFSV--DFDKVEGAVESLSTEILTIQARG 732
SH + + L W +E+ + T+ V D+D++ L E+ I++ G
Sbjct: 566 SHMRNRQLVAAWAYEQGKAKGVIERVQKDGKTYFVVRDYDELRVLFGQLLRELQRIKSEG 625
Query: 733 DKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAP 769
D EA L++ Y P ++ + LE +DI P
Sbjct: 626 DFEAGKALIETYGVEVDP-QIHAEVLER-NAALDIPP 660
>gi|299140767|ref|ZP_07033905.1| peptidase, M49 family [Prevotella oris C735]
gi|298577733|gb|EFI49601.1| peptidase, M49 family [Prevotella oris C735]
Length = 644
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 194/442 (43%), Gaps = 70/442 (15%)
Query: 381 DATNHSVGSIYDLYSV-----PYSEEYNSYLTRA----SELLHKAGDMASSPSLKRLLH- 430
D + V S Y+ V P S NS LT+ +EL++KA M + +++++H
Sbjct: 171 DVSQSKVESFYNGMKVEGDARPVSYGLNSKLTKQNGKLTELVYKANGMYGNK-IRQIIHW 229
Query: 431 -SKADAFLSN-------------------NYYDS-DIAWI-ELDSELDVTIGPYETYEDA 468
+KA + N Y+D I W+ E D ++D G E Y D
Sbjct: 230 LTKASQYAENEQQKKVIAILIKYYQTGDLKYFDEYSIEWLKEQDGQVDFINGFIEVYGDP 289
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G K ++E + +D +AT + +L +N Q E + P+D +K K V VI
Sbjct: 290 L-GLKGSWEGIVEYKDAEATKRTRLISENAQWFEDHSPVDRRFKKKTVRGVTANVICAAM 348
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP---IADVCIRKEQQ 585
GD + NLPN + I + G+ V + N+++A + R + + I E +
Sbjct: 349 LGGDEYPSTAIGINLPNADWIRAEHGSKSVTIGNLTDA-YSKASRGNGFMQEFVIDDETR 407
Query: 586 ELVDFDSFFT---HNICHECC-HGIGP-HSITLPDGRQSTVRLELQELHSAMEEAKADIV 640
L+D H HEC HG G T PD L+ + +EEA+AD+
Sbjct: 408 ALIDRYGDLCDELHTDLHECLGHGSGQLLKETDPDA--------LKAYGNTIEEARADLF 459
Query: 641 GLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCF--RSVRFGL----EESHGKGQALQFN 691
GL+ L L+ L P + KS Y +++ ++VR L EE+H + +AL N
Sbjct: 460 GLYYLADDKLVELGLTPDREAYKSQYYTYMQNGLLTQAVRIELGNDIEEAHMRNRALIAN 519
Query: 692 WLFEKE------AFILHSDDTF-SV-DFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
W + + A +H + SV D++ + G EI I++ GD AA L++K
Sbjct: 520 WALDMDVEQQIVALEMHGGKHYVSVKDYEGLRGIFACQLGEIQRIKSEGDFNAARALVEK 579
Query: 744 YCTM--TQPLKVALQKLENVQV 763
Y +Q + L++ E + +
Sbjct: 580 YAVHIDSQLHREILERYEKLGI 601
>gi|294805929|ref|ZP_06764796.1| peptidase family M49 [Bacteroides xylanisolvens SD CC 1b]
gi|294446811|gb|EFG15411.1| peptidase family M49 [Bacteroides xylanisolvens SD CC 1b]
Length = 675
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 186/429 (43%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A SF++ +K + E + L+ +V ++ + + Y + +
Sbjct: 197 QKEAESFYSALKDPKDETPVSYGLNSRLVKENGKLEEKVWKVGGL-----YTQAIEKIVY 251
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + + K ++ + + N D D I W+ +LDS +D G E+Y D
Sbjct: 252 WLKKAEGVAENEAQKAVITKLIQFYETGNLKDFDEYAILWVKDLDSRIDFVNGFTESYGD 311
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D ++T + ++ N Q E + P+D ++K + V +VI
Sbjct: 312 PL-GMKASWESLVNFKDLESTHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAA 370
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
+GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 371 ILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDA 428
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+ +L+D S T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 429 EIQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 480
Query: 639 IVGLW--ALKFLIGRDLL--PKSLVKSMYVSFLAGCFRS-VRF----GLEESHGKGQALQ 689
+ GL+ A L+ LL P + Y + G VR +EE+H + + L
Sbjct: 481 LFGLYYVADPKLVELGLLYSPDAYKAQYYTYLMNGLMTQLVRIEPGNTVEEAHMRNRQLI 540
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK A T+ V D+ KV L EI I++ GD E A L+
Sbjct: 541 ARWVFEKGAADKVVELTKKDGKTYVVINDYQKVRELFGELLAEIQRIKSTGDFEGARSLV 600
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 601 ENYAVKVDP 609
>gi|167763149|ref|ZP_02435276.1| hypothetical protein BACSTE_01519 [Bacteroides stercoris ATCC
43183]
gi|167698443|gb|EDS15022.1| peptidase family M49 [Bacteroides stercoris ATCC 43183]
Length = 702
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 189/427 (44%), Gaps = 43/427 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A +F++ +K + E + L+ +V ++ + + Y + + +
Sbjct: 224 QQEAEAFYSAMKDPKDETPVSYGLNSRLVKENGKIQEKVWKVGGL-----YGAAIGKIVY 278
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDSELDVTIGPYETYED 467
L KA +A +P K ++ + + + + + D I W+ +LDS +D G E+Y D
Sbjct: 279 WLKKAEGVAENPEQKAVIAKLIEFYETGDLKTFDDYAILWVKDLDSRIDFVNGFTESYGD 338
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D +AT + ++ N Q E + P++ +K + V +VI
Sbjct: 339 PL-GMKASWESLVNFKDLEATRRTEIISSNAQWFEDHSPVEKQFKKEKVKGVSAKVITAA 397
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQEL 587
+GD+ + NLPN I G+ V + N+++A K + EL
Sbjct: 398 ILAGDLYPSTAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFNEEFVYSNAEL 457
Query: 588 VDFDSFF-----THNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADIV 640
D + H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 458 QLIDKYADTTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADLF 509
Query: 641 GLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQFN 691
GL+ A L+ L P + K+ + ++L + VR +EE+H + + L
Sbjct: 510 GLYYVADPKLVELGLTPSADAYKAQFYTYLMNGLMTQLVRIEPGNNVEEAHMRNRQLIAR 569
Query: 692 WLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
W++EK A + T+ V D++KV L EI I++ GD +AA L++
Sbjct: 570 WVYEKGAADKVVELVKKDGKTYVVINDYEKVRELFGELLAEIQRIKSTGDYDAARELVES 629
Query: 744 YCTMTQP 750
Y P
Sbjct: 630 YAVKVDP 636
>gi|397690271|ref|YP_006527525.1| dipeptidyl-peptidase III [Melioribacter roseus P3M]
gi|395811763|gb|AFN74512.1| dipeptidyl-peptidase III [Melioribacter roseus P3M]
Length = 678
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 31/373 (8%)
Query: 398 YSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDS 453
Y Y+ + + + L KA +A + K+ L +++ N + +I WI + +S
Sbjct: 241 YKGMYHLAIDKITYWLEKAMAVAENEQQKKALDLLVKYYVTGNLKLWDQYNIEWIKDTNS 300
Query: 454 ELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKS 513
+DV G ETY D + GYKA FE+ + +D +AT ++K DN Q E N P+ +K
Sbjct: 301 VVDVINGFIETYNDPL-GYKANFESVVSFKDFEATKRIKAISDNAQWFEDNSPIMPEHKK 359
Query: 514 KDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV--SEAKFKNI 571
K+V +VI ++ SGD + NLPN I K+ G+ V L N+ S K
Sbjct: 360 KNVKGISAKVITVVVESGDASPSTPIGINLPNANWIRKEYGSKSVNLGNIVHSYNKASES 419
Query: 572 LRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSA 631
I + +E+ E ++ + IG S L G L+ S
Sbjct: 420 SGLIEEFAYSQEEIERAKKYGALASDLHTDMHEVIGHASGQLNPGVGQPNET-LKNYASV 478
Query: 632 MEEAKADIVGLWALKFLIGRDLLPKSLVKSM------YVSFLAGCFRS----VRFG--LE 679
+EEA+AD+V L+ F++ L+ ++ S+ Y +++ + + G +E
Sbjct: 479 LEEARADLVALY---FIMDPKLVEIGVMPSLDAGKAEYDAYIRNGLMTQLARIELGDDIE 535
Query: 680 ESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQAR 731
++H + + L W++EK E + F + D+ K+ L EI I++
Sbjct: 536 QAHMRNRQLVSKWVYEKGMNDNVIEKKVKDGKTYFVINDYRKLRALFGELLREIQRIKSE 595
Query: 732 GDKEAASLLLQKY 744
GD EA L++ Y
Sbjct: 596 GDYEAGKNLVENY 608
>gi|163814522|ref|ZP_02205911.1| hypothetical protein COPEUT_00673 [Coprococcus eutactus ATCC 27759]
gi|158450157|gb|EDP27152.1| hydrolase, NUDIX family [Coprococcus eutactus ATCC 27759]
Length = 185
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E D+ G TG RSE H G HRT + WI + ++LLQ+RA KDS+PG
Sbjct: 2 ELFDICDEQGNPTGDIVERSEAHAKGICHRTAHIWIAKQENGRYKVLLQKRAMNKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF-LQQNVINDGK-FINNE 124
+D SSAGHI AGD L SA REL EELGI +F TF +Q GK F +NE
Sbjct: 62 RYDTSSAGHIQAGDEPLESALRELGEELGIKAEASDLDFAGTFRIQYEKEFHGKMFRDNE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
A V++ P+ + T+Q+ E+ V + EE D F
Sbjct: 122 VAFVFVYQ--KPVDIADLTIQKEELDGVSWFDLEETYEACKNHDQKFC 167
>gi|150010345|ref|YP_001305088.1| dipeptidyl-peptidase III [Parabacteroides distasonis ATCC 8503]
gi|149938769|gb|ABR45466.1| putative dipeptidyl-peptidase III [Parabacteroides distasonis ATCC
8503]
Length = 686
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 300 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 358
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 359 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 418
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 419 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 477
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 478 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 530
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ + T+ V D+ ++ +
Sbjct: 531 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRNGKTYVVVNDYPRLRELFGT 590
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 591 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMR 647
>gi|404405457|ref|ZP_10997041.1| topoisomerase IA [Alistipes sp. JC136]
Length = 666
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 36/333 (10%)
Query: 445 DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
+I W+ + S +D G E Y D + G KA +E + D +A + ++ DN Q E
Sbjct: 281 NIGWVKDTVSNVDFINGFIEDYGDPL-GRKAAWEGNVNFMDKEACHRTEVISDNAQWFED 339
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV 563
+ P+D AY+ V +VI + GD + NLPN + I K+ G+ V + N+
Sbjct: 340 HSPVDEAYRKPVVKGVSAKVITVAMLGGDCYPSTPIGINLPNADWIRKEYGSKSVTIDNI 399
Query: 564 SE----AKFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPD 615
+ A N + +R E +E +D H HEC HG G + +
Sbjct: 400 TYAYDMAAHGNGFN--EEFVLRAEDRERMDKYGKLADDLHTDLHECLGHGSGQLAPGVKG 457
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPK-SLVKSMYVSFLAGCFR 672
G EL+ S +EE +AD+ GL+ L L+ L+P + K+ Y ++
Sbjct: 458 G-------ELKSYSSTLEETRADLFGLYYLGDPKLVELGLVPSFDVAKAGYAKYILNGMM 510
Query: 673 S----VRFG--LEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ V G +EESH + + L W +E+ + + T++V DF+K+
Sbjct: 511 TQLARVELGKNVEESHMRNRKLIAEWCYERGKADNVIEMVRENGKTYAVVNDFEKLRQLF 570
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPL 751
+ E+ I++ GD EA L+++Y + P+
Sbjct: 571 GEMLREVQRIKSEGDYEAGRKLVEQYAVVVDPV 603
>gi|281425688|ref|ZP_06256601.1| peptidase, M49 family [Prevotella oris F0302]
gi|281400275|gb|EFB31106.1| peptidase, M49 family [Prevotella oris F0302]
Length = 644
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 194/442 (43%), Gaps = 70/442 (15%)
Query: 381 DATNHSVGSIYDLYSV-----PYSEEYNSYLTRA----SELLHKAGDMASSPSLKRLLH- 430
D + V S YD V P S NS LT+ +EL++KA M + +++++H
Sbjct: 171 DVSQSEVESFYDGMKVEGEARPVSYGLNSKLTKQNGKLTELVYKANGMYGN-KIRQIIHW 229
Query: 431 -SKADAFLSN-------------------NYYDS-DIAWI-ELDSELDVTIGPYETYEDA 468
+KA + N Y+D I W+ E + ++D G E Y D
Sbjct: 230 LTKASQYAENEQQKKVIAILIKYYQTGDLKYFDEYSIEWLKEQEGQVDFINGFIEVYGDP 289
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G K ++E + +D +AT + +L +N Q E + P+D +K K V VI
Sbjct: 290 L-GLKGSWEGIVEYKDAEATKRTRLISENAQWFEDHSPVDRRFKKKTVRGVTANVICAAM 348
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP---IADVCIRKEQQ 585
GD + NLPN + I + G+ V + N+++A + R + + I E +
Sbjct: 349 LGGDEYPSTAIGINLPNADWIRAEYGSKSVTIGNLTDA-YSKASRGNGFMQEFVIDDETR 407
Query: 586 ELVDFDSFFT---HNICHECC-HGIGP-HSITLPDGRQSTVRLELQELHSAMEEAKADIV 640
L+D H HEC HG G T PD L+ + +EEA+AD+
Sbjct: 408 ALIDRYGDLCDELHTDLHECLGHGSGQLLKETDPDA--------LKAYGNTIEEARADLF 459
Query: 641 GLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCF--RSVRFGL----EESHGKGQALQFN 691
GL+ L L+ L P + KS Y +++ ++VR L EE+H + +AL N
Sbjct: 460 GLYYLADDKLVELGLTPDREAYKSQYYTYMQNGLLTQAVRIELGNDIEEAHMRNRALIAN 519
Query: 692 WLFEKE------AFILHSDDTF-SV-DFDKVEGAVESLSTEILTIQARGDKEAASLLLQK 743
W + + A +H + SV D++ + G EI +++ GD AA L++K
Sbjct: 520 WALDMDVEQQIVALEMHGGKHYVSVKDYEGLRGIFARQLREIQRVKSEGDLNAARALVEK 579
Query: 744 YCTM--TQPLKVALQKLENVQV 763
Y +Q + L++ E + +
Sbjct: 580 YAVHIDSQLHREILERYEKLGI 601
>gi|256839195|ref|ZP_05544705.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256740114|gb|EEU53438.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 686
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 300 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 358
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 359 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 418
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 419 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 477
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 478 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 530
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ T+ V D+ ++ +
Sbjct: 531 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRDGKTYVVVNDYPRLRELFGT 590
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 591 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 647
>gi|423333152|ref|ZP_17310933.1| hypothetical protein HMPREF1075_02584 [Parabacteroides distasonis
CL03T12C09]
gi|409228032|gb|EKN20924.1| hypothetical protein HMPREF1075_02584 [Parabacteroides distasonis
CL03T12C09]
Length = 678
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 292 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 350
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 351 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 410
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 411 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 469
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 470 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 522
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ T+ V D+ ++ +
Sbjct: 523 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRDGKTYVVVNDYPRLRELFGT 582
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 583 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 639
>gi|423340559|ref|ZP_17318297.1| hypothetical protein HMPREF1059_04222 [Parabacteroides distasonis
CL09T03C24]
gi|409227317|gb|EKN20216.1| hypothetical protein HMPREF1059_04222 [Parabacteroides distasonis
CL09T03C24]
Length = 678
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 292 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 350
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 351 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 410
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 411 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 469
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 470 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 522
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ T+ V D+ ++ +
Sbjct: 523 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRDGKTYVVVNDYPRLRELFGT 582
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 583 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 639
>gi|301308424|ref|ZP_07214378.1| peptidase, M49 family [Bacteroides sp. 20_3]
gi|300833894|gb|EFK64510.1| peptidase, M49 family [Bacteroides sp. 20_3]
Length = 686
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 300 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 358
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 359 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 418
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 419 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 477
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 478 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 530
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ T+ V D+ ++ +
Sbjct: 531 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRDGKTYVVVNDYPRLRELFGT 590
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 591 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 647
>gi|298374741|ref|ZP_06984699.1| peptidase, M49 family [Bacteroides sp. 3_1_19]
gi|298269109|gb|EFI10764.1| peptidase, M49 family [Bacteroides sp. 3_1_19]
Length = 686
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 300 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 358
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 359 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 418
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 419 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 477
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 478 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 530
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ T+ V D+ ++ +
Sbjct: 531 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRDGKTYVVVNDYPRLRELFGT 590
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 591 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 647
>gi|255012391|ref|ZP_05284517.1| putative dipeptidyl-peptidase III [Bacteroides sp. 2_1_7]
gi|410104024|ref|ZP_11298941.1| hypothetical protein HMPREF0999_02713 [Parabacteroides sp. D25]
gi|409235282|gb|EKN28101.1| hypothetical protein HMPREF0999_02713 [Parabacteroides sp. D25]
Length = 678
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 292 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 350
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 351 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 410
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 411 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 469
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 470 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 522
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E KEA ++ T+ V D+ ++ +
Sbjct: 523 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKEANVIELKKRDGKTYVVVNDYPRLRELFGT 582
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 583 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 639
>gi|329960084|ref|ZP_08298548.1| peptidase family M49 [Bacteroides fluxus YIT 12057]
gi|328533036|gb|EGF59809.1| peptidase family M49 [Bacteroides fluxus YIT 12057]
Length = 682
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 41/369 (11%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA +A +P K ++ + + + + D I W+ +LDS +D G E+Y D
Sbjct: 260 LKKAEGVAETPGQKAVIAKLVEFYETGDLKAFDEYAILWVKDLDSRVDFVNGFTESYGDP 319
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G KA++E+ + +D +AT + +L N Q E P++ +K ++V +VI
Sbjct: 320 L-GMKASWESLVNFKDLEATRRTELISGNAQWFEDRSPVEKQFKKEEVKGVSAKVITAAI 378
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKEQ 584
+GD+ + NLPN I G+ V + N+++A K N + +
Sbjct: 379 LAGDLYPATAIGINLPNANWIRSQHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDTE 436
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKADI 639
+L+D + T H HEC HG G + PD L+ S +EEA+AD+
Sbjct: 437 LQLIDKYADLTGDLHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARADL 488
Query: 640 VGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQF 690
GL+ A L+ L P + K+ Y ++L + VR +EE+H + + L
Sbjct: 489 FGLYYVADPKLVELGLTPDADAFKAEYYTYLMNGLMTQLVRIEPGNHVEEAHMRNRQLIA 548
Query: 691 NWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
W+FEK A + T+ V D+ K+ L EI I++ GD EAA L++
Sbjct: 549 RWVFEKGAADKVVEMVKKDGKTYVVVNDYGKLRQLFGELLAEIQRIKSTGDFEAARDLVE 608
Query: 743 KYCTMTQPL 751
Y P+
Sbjct: 609 TYAVKVDPV 617
>gi|375255241|ref|YP_005014408.1| peptidase family M49 [Tannerella forsythia ATCC 43037]
gi|363407138|gb|AEW20824.1| peptidase family M49 [Tannerella forsythia ATCC 43037]
Length = 674
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 169/374 (45%), Gaps = 43/374 (11%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y + R + L KA A + + + ++ + + + + D I W+ +L SE+D
Sbjct: 242 YTQAIERIVDELQKAVAFAENDAQRAVIEKLIEYYRTGDLKTFDAYAILWVKDLASEVDF 301
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G ETY D + G KA++E+ + +AT + ++ +N Q E + PMD +K ++V
Sbjct: 302 VNGFTETYGDPL-GMKASWESITNFINREATKRTRIISENAQWFEDHSPMDKRFKKEEVK 360
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILR 573
+VI + GD + NLPN + I K G+ V ++N++EA K N +
Sbjct: 361 GITAKVITVAMLGGDCYPTTPIGINLPNADWIRKHYGSKSVTIENITEAYDKAAKGNGFK 420
Query: 574 PIADVCIRKEQQELVDFDSFFTHNI---CHECCHGIGPHSITLPDGRQSTVRLELQELHS 630
+ I ++E ++ F T N+ HEC +G S L +G L S
Sbjct: 421 E--EFVINDAERERIEQYGFITDNLHTDLHEC---LGHGSGQLLEGTDPNA---LGAYSS 472
Query: 631 AMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS--VRF----GL 678
+EEA+ADI +AL +L + LL L+ K+ Y +L + VR +
Sbjct: 473 TLEEARADI---FALYYLADKKLLELGLLSDPEAYKAEYYKYLMNGLMTQLVRIQSGKDI 529
Query: 679 EESHGKGQALQFNWLFEKE------AFILHSDDTFSV--DFDKVEGAVESLSTEILTIQA 730
EE+H + + L W +EK +F TF D++K+ L E+ I++
Sbjct: 530 EEAHMRNRQLIARWAYEKGKPDNVVSFEKRDGKTFVAINDYEKLRTLFGELLAELQRIKS 589
Query: 731 RGDKEAASLLLQKY 744
GD A L++ Y
Sbjct: 590 EGDFNAGKQLVETY 603
>gi|393788522|ref|ZP_10376649.1| hypothetical protein HMPREF1068_02929 [Bacteroides nordii
CL02T12C05]
gi|392654202|gb|EIY47850.1| hypothetical protein HMPREF1068_02929 [Bacteroides nordii
CL02T12C05]
Length = 683
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +DV G E+Y D + G KA++E+ + +D AT + ++ N Q E +
Sbjct: 297 ILWVKDLNSRIDVVNGFTESYGDPL-GMKASWESLVNFKDLVATQRTEIISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P++ +K +V +VI +GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVEAQFKKSEVKGVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + ++EL+D S T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFNE--EFVYSDAERELIDQYSDLTDELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPK-SLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A LI LL K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLIELGLLSSDEAYKAQYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK A + T+ V D++KV
Sbjct: 526 TQLVRIQPGNTVEEAHMRNRQLIARWVFEKGAADKVVELVKKDGKTYVVVNDYEKVRQLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPL 751
L EI I++ GD AA L++ Y P+
Sbjct: 586 GELLAEIQRIKSTGDFAAARALVEDYAVKVDPV 618
>gi|251781548|ref|YP_002995849.1| nudix hydrolase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242390176|dbj|BAH80635.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 179
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 101/190 (53%), Gaps = 15/190 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KTG R + + GDYH V+ +F + + L+ QR+A+ K WPG+W
Sbjct: 4 EFWDIYTANRVKTGRVMERGSLFKQGDYHLVVHICLFNDRGEMLIQQRQAE-KAGWPGLW 62
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELG++L FT IN G+ F D
Sbjct: 63 DVTVGGSALAGETAQQAAMRELKEELGLSLDLTGVRPHFT------INFGE----GFDDT 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
+LVT + LE+ LQ+ EV AV++ E ++ D+ SF+PY + G F+++
Sbjct: 113 FLVTVPYLVDLESLVLQEEEVQAVRWANRHEILRMI--DEGSFIPY-LKGKIDLCFDMVG 169
Query: 189 QRYKENTMER 198
Q Y + +R
Sbjct: 170 Q-YGAHQFQR 178
>gi|424664438|ref|ZP_18101474.1| hypothetical protein HMPREF1205_00313 [Bacteroides fragilis HMW
616]
gi|404576020|gb|EKA80761.1| hypothetical protein HMPREF1205_00313 [Bacteroides fragilis HMW
616]
Length = 683
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 191/433 (44%), Gaps = 55/433 (12%)
Query: 353 QEDATSFFTVIKRRSE-----FNLDSSL---SGHIVDATNHSVGSIYDLYSVPYSEEYNS 404
Q++A F+ +K + + L+S L +G IV+ VG +Y E+
Sbjct: 205 QQEAEDFYNAMKDPKDETPVSYGLNSRLVKENGKIVEKV-WKVGGLY----TQAIEKIVY 259
Query: 405 YLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWI-ELDSELDVTIGPYE 463
+L +A + A D A ++ +L+ L + + I W+ +L+S +D T G E
Sbjct: 260 WLKKAERV---AEDEAQKAAIGKLIEYYETGDLKT-FDEYAILWVKDLNSRIDFTNGFTE 315
Query: 464 TYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRV 523
TY D + G KA++E+ + +D +AT + +L N Q E + P+D +K + V +V
Sbjct: 316 TYGDPL-GMKASWESIVNFKDLEATRRTELISGNAQWFEDHSPVDKQFKKEKVKGVTAKV 374
Query: 524 IQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVC 579
I GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 375 ITAAILGGDLYPATAIGINLPNSNWIRSHHGSKSVTIGNITDAYNKAAHGNGFN--EEFV 432
Query: 580 IRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEE 634
+++L+D T H HEC HG G + PD L+ S +EE
Sbjct: 433 YSDTEKQLIDKYGDLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEE 484
Query: 635 AKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRF----GLEESHGKG 685
A+AD+ GL+ A L+ L+P + K+ Y ++L + VR +EE+H +
Sbjct: 485 ARADLFGLYYVADPKLLELGLVPAEEAYKAEYYTYLMNGLMTQLVRIEPGNSVEEAHMRN 544
Query: 686 QALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAA 737
+ L W+FEK + T+ V D+ K+ L EI I++ GD AA
Sbjct: 545 RQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLFGELLAEIQRIKSTGDFAAA 604
Query: 738 SLLLQKYCTMTQP 750
L++ Y P
Sbjct: 605 RSLVETYAVKVDP 617
>gi|423305645|ref|ZP_17283644.1| hypothetical protein HMPREF1072_02584 [Bacteroides uniformis
CL03T00C23]
gi|423309810|ref|ZP_17287800.1| hypothetical protein HMPREF1073_02550 [Bacteroides uniformis
CL03T12C37]
gi|392680877|gb|EIY74241.1| hypothetical protein HMPREF1072_02584 [Bacteroides uniformis
CL03T00C23]
gi|392683914|gb|EIY77247.1| hypothetical protein HMPREF1073_02550 [Bacteroides uniformis
CL03T12C37]
Length = 675
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 164/377 (43%), Gaps = 37/377 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y L + L KA +A +P K ++ + + + + D I W+ +L+S +D
Sbjct: 242 YGQALEKIVYWLKKAEGVAETPEQKAVIAKLMEFYETGDLKTFDEYAILWVKDLNSRIDF 301
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + +L N Q E + P+D +K + V
Sbjct: 302 VNGFTESYGDPL-GMKASWESLVNFKDLEATQRTELISGNAQWFEDHSPVDGQFKKEKVK 360
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD 577
+VI +GD+ + NLPN I G+ V + N+++A K +
Sbjct: 361 GVSAKVITAAILAGDLYPATAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 420
Query: 578 VCIRKEQQELVDFDSFFT-----HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHS 630
EL D + H HEC HG G + PD L+ S
Sbjct: 421 EEFVYSDAELQLIDKYADVTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGS 472
Query: 631 AMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEES 681
+EEA+AD+ GL+ A L+ L P + K+ Y ++L + VR +EE+
Sbjct: 473 TIEEARADLFGLYYVADPKLVELGLTPSADAYKAQYYTYLMNGLMTQLVRIEPGNNVEEA 532
Query: 682 HGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGD 733
H + + L W++EK A + T+ V D++KV L EI I++ GD
Sbjct: 533 HMRNRQLIARWVYEKGAAEKVVELVKKDGKTYVVINDYEKVRDLFGRLLAEIQRIKSTGD 592
Query: 734 KEAASLLLQKYCTMTQP 750
A L++ Y P
Sbjct: 593 YAGAHDLVEAYAVKVDP 609
>gi|218130246|ref|ZP_03459050.1| hypothetical protein BACEGG_01834 [Bacteroides eggerthii DSM 20697]
gi|217987530|gb|EEC53858.1| peptidase family M49 [Bacteroides eggerthii DSM 20697]
Length = 682
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 172/379 (45%), Gaps = 41/379 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDSELDV 457
Y L + L KA +A +P K ++ + + + + + D + W+ +LDS +D
Sbjct: 249 YGQALEKIVYWLKKAEGVAENPEQKAVIAKLVEFYETGDLKTFDDYAVLWVKDLDSRIDF 308
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + ++ N Q E + P++ +K ++V
Sbjct: 309 VNGFTESYGDPL-GMKASWESLVNFKDLEATRRTEIISSNAQWFEDHSPVEKQFKKEEVK 367
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILR 573
+VI +GD+ + NLPN I G+ V + N+++A K N
Sbjct: 368 GVSAKVITAAILAGDLYPSTAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 427
Query: 574 PIADVCIRKEQQELVDFDSFFTHNI---CHECC-HGIGPHSITL-PDGRQSTVRLELQEL 628
+ + +L+D + T N+ HEC HG G + PD L+
Sbjct: 428 E--EFVYSDAELKLIDQYADITDNLHTDLHECLGHGSGKLLPGVDPDA--------LKAY 477
Query: 629 HSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRF----GLE 679
S +EEA+AD+ GL+ A L+ L P + K+ + ++L + VR +E
Sbjct: 478 GSTIEEARADLFGLYYVADPKLVELGLTPSEDAYKAQFYTYLMNGLMTQLVRIEPGNNVE 537
Query: 680 ESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQAR 731
E+H + + L W++EK A + T+ V D+ KV L EI I++
Sbjct: 538 EAHMRNRQLIARWVYEKGAADKVVELVKKDGKTYVVINDYAKVRELFGELLAEIQRIKST 597
Query: 732 GDKEAASLLLQKYCTMTQP 750
GD +AA L++ Y P
Sbjct: 598 GDYDAARKLVEAYAVKVDP 616
>gi|408400817|ref|YP_006858780.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|407967045|dbj|BAM60283.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 183
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KTG R + + GDYH V+ +F + + L+ QR+A+ K WPG+W
Sbjct: 8 EFWDIYTANRVKTGRVMERGSLFKQGDYHLVVHICLFNDRGEMLIQQRQAE-KAGWPGLW 66
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELG++L FT IN G+ F D
Sbjct: 67 DVTVGGSALAGETAQQAAMRELKEELGLSLDLTGVRPHFT------INFGE----GFDDT 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
+LVT + LE+ LQ+ EV AV++ E ++ D+ SF+PY + G F+++
Sbjct: 117 FLVTVPYLVDLESLVLQEEEVQAVRWANRHEILRMI--DEGSFIPY-LKGKIDLCFDMVG 173
Query: 189 Q 189
Q
Sbjct: 174 Q 174
>gi|270293490|ref|ZP_06199692.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274957|gb|EFA20817.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 682
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 164/377 (43%), Gaps = 37/377 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y L + L KA +A +P K ++ + + + + D I W+ +L+S +D
Sbjct: 249 YGQALEKIVYWLKKAEGVAETPEQKAVIAKLMEFYETGDLKTFDEYAILWVKDLNSRIDF 308
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + +L N Q E + P+D +K + V
Sbjct: 309 VNGFTESYGDPL-GMKASWESLVNFKDLEATQRTELISGNAQWFEDHSPVDGQFKKEKVK 367
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD 577
+VI +GD+ + NLPN I G+ V + N+++A K +
Sbjct: 368 GVSAKVITAAILAGDLYPATAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 427
Query: 578 VCIRKEQQELVDFDSFF-----THNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHS 630
EL D + H HEC HG G + PD L+ S
Sbjct: 428 EEFVYSDAELQLIDKYADVTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGS 479
Query: 631 AMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEES 681
+EEA+AD+ GL+ A L+ L P + K+ Y ++L + VR +EE+
Sbjct: 480 TIEEARADLFGLYYVADPKLVELGLTPSADAYKAQYYTYLMNGLMTQLVRIEPGNNVEEA 539
Query: 682 HGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGD 733
H + + L W++EK A + T+ V D++KV L EI I++ GD
Sbjct: 540 HMRNRQLIARWVYEKGAAEKVVELVKKDGKTYVVINDYEKVRDLFGRLLAEIQRIKSTGD 599
Query: 734 KEAASLLLQKYCTMTQP 750
A L++ Y P
Sbjct: 600 YAGAHDLVEAYAVKVDP 616
>gi|160888704|ref|ZP_02069707.1| hypothetical protein BACUNI_01122 [Bacteroides uniformis ATCC 8492]
gi|317479551|ref|ZP_07938679.1| dipeptidyl-peptidase III [Bacteroides sp. 4_1_36]
gi|156861603|gb|EDO55034.1| peptidase family M49 [Bacteroides uniformis ATCC 8492]
gi|316904281|gb|EFV26107.1| dipeptidyl-peptidase III [Bacteroides sp. 4_1_36]
Length = 682
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 164/377 (43%), Gaps = 37/377 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y L + L KA +A +P K ++ + + + + D I W+ +L+S +D
Sbjct: 249 YGQALEKIVYWLKKAEGVAETPEQKAVIAKLMEFYETGDLKTFDEYAILWVKDLNSRIDF 308
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + +L N Q E + P+D +K + V
Sbjct: 309 VNGFTESYGDPL-GMKASWESLVNFKDLEATQRTELISGNAQWFEDHSPVDGQFKKEKVK 367
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD 577
+VI +GD+ + NLPN I G+ V + N+++A K +
Sbjct: 368 GVSAKVITAAILAGDLYPATAIGINLPNANWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 427
Query: 578 VCIRKEQQELVDFDSFF-----THNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHS 630
EL D + H HEC HG G + PD L+ S
Sbjct: 428 EEFVYSDAELQLIDKYADVTDELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGS 479
Query: 631 AMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEES 681
+EEA+AD+ GL+ A L+ L P + K+ Y ++L + VR +EE+
Sbjct: 480 TIEEARADLFGLYYVADPKLVELGLTPSADAYKAQYYTYLMNGLMTQLVRIEPGNNVEEA 539
Query: 682 HGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGD 733
H + + L W++EK A + T+ V D++KV L EI I++ GD
Sbjct: 540 HMRNRQLIARWVYEKGAAEKVVELVKKDGKTYVVINDYEKVRDLFGRLLAEIQRIKSTGD 599
Query: 734 KEAASLLLQKYCTMTQP 750
A L++ Y P
Sbjct: 600 YAGAHDLVEAYAVKVDP 616
>gi|410493842|ref|YP_006903688.1| NUDIX hydrolase [Streptococcus dysgalactiae subsp. equisimilis
AC-2713]
gi|417928312|ref|ZP_12571700.1| hydrolase, NUDIX family [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340766186|gb|EGR88712.1| hydrolase, NUDIX family [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439002|emb|CCI61630.1| NUDIX hydrolase [Streptococcus dysgalactiae subsp. equisimilis
AC-2713]
Length = 178
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KTG R + + GDYH V+ +F + + L+ QR+A+ K WPG+W
Sbjct: 3 EFWDIYTANRVKTGRVMERGSLFKQGDYHLVVHICLFNDRGEMLIQQRQAE-KAGWPGLW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELG++L FT IN G+ F D
Sbjct: 62 DVTVGGSALAGETAQQAAMRELKEELGLSLDLTGVRPHFT------INFGE----GFDDT 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
+LVT + LE+ LQ+ EV AV++ E ++ D+ SF+PY + G F+++
Sbjct: 112 FLVTVPYLVDLESLVLQEEEVQAVRWANRHEILRMI--DEGSFIPY-LKGKIDLCFDMVG 168
Query: 189 Q 189
Q
Sbjct: 169 Q 169
>gi|53714710|ref|YP_100702.1| dipeptidyl-peptidase III [Bacteroides fragilis YCH46]
gi|52217575|dbj|BAD50168.1| putative dipeptidyl-peptidase III [Bacteroides fragilis YCH46]
Length = 676
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 290 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 348
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 349 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 408
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 409 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 466
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 467 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 518
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 519 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 578
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 579 GELLAEIQRIKSTGDFDAARSLVENYAVKVDP 610
>gi|384098514|ref|ZP_09999629.1| MutT (Nudix) family hydrolase [Imtechella halotolerans K1]
gi|383835638|gb|EID75063.1| MutT (Nudix) family hydrolase [Imtechella halotolerans K1]
Length = 183
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E + +L GQ T + + HR G +H T + W++ E +++L Q+R+ K ++PG+W
Sbjct: 3 EQIAILDALGQDTLQQCSKEKAHRYGFFHATAHLWLYTED-KKILWQKRSFSKSNFPGLW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S AGHI+AG+S L + RE +EELG+ L D F+ +++ + FI++EF +
Sbjct: 62 DVSVAGHITAGESPLAAILRETKEELGLELNADQLTFIGR-IKEIHQHSPVFIDSEFHYI 120
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y+ PI + A TLQ+ EV +++ + KN A + +VP+
Sbjct: 121 YIAEL--PIAISALTLQKEEVHSIELRPLDSLKN--AWEKLGYVPH 162
>gi|423278474|ref|ZP_17257388.1| hypothetical protein HMPREF1203_01605 [Bacteroides fragilis HMW
610]
gi|404586484|gb|EKA91057.1| hypothetical protein HMPREF1203_01605 [Bacteroides fragilis HMW
610]
Length = 683
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 186/429 (43%), Gaps = 47/429 (10%)
Query: 353 QEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++A F+ +K + E + L+ +V V ++ + + Y + +
Sbjct: 205 QQEAEDFYNAMKDPKDETPVSYGLNSRLVKENGKIVEKVWKVGGL-----YTQAIEKIVY 259
Query: 412 LLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYED 467
L KA +A + K + + + + + D I W+ +L+S +D T G ETY D
Sbjct: 260 WLKKAEGVAEDEAQKAAIGKLIEYYETGDLKTFDEYAILWVKDLNSRIDFTNGFTETYGD 319
Query: 468 AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLI 527
+ G KA++E+ + +D +AT + +L N Q E + P+D +K + V +VI
Sbjct: 320 PL-GMKASWESIVNFKDLEATRRTELISGNAQWFEDHSPVDKQFKKEKVKGVTAKVITAA 378
Query: 528 YNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIRKE 583
GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 379 ILGGDLYPATAIGINLPNSNWIRSHHGSKSVTIGNITDAYNKAAHGNGFN--EEFVYSDT 436
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAMEEAKAD 638
+++L+D T H HEC HG G + PD L+ S +EEA+AD
Sbjct: 437 EKQLIDKYGDLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTIEEARAD 488
Query: 639 IVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRF----GLEESHGKGQALQ 689
+ GL+ A L+ L+P + K+ Y ++L + VR +EE+H + + L
Sbjct: 489 LFGLYYVADPKLLELGLVPAEEAYKAEYYTYLMNGLMTQLVRIEPGNSVEEAHMRNRQLI 548
Query: 690 FNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
W+FEK + T+ V D+ K+ L EI I++ GD AA L+
Sbjct: 549 ARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLFGELLAEIQRIKSTGDFAAARSLV 608
Query: 742 QKYCTMTQP 750
+ Y P
Sbjct: 609 ETYAVKVDP 617
>gi|326802558|ref|YP_004320377.1| dipeptidyl-peptidase III [Sphingobacterium sp. 21]
gi|326553322|gb|ADZ81707.1| Dipeptidyl-peptidase III [Sphingobacterium sp. 21]
Length = 685
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 197/427 (46%), Gaps = 46/427 (10%)
Query: 347 SLTEKQQEDATSFFTVIKRRSEFNLDSSL---SGHIVDATNHSVGSIYDLYSVPYSEEYN 403
+T+++ E+ + F + E+ L+S + SG +++ +G +YD
Sbjct: 206 GVTQQEVENFYNSFPHTGQDPEWGLNSKVTKESGKLIERV-WKMGGMYD----------- 253
Query: 404 SYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWIE-LDSELDVTI 459
+ + + + KA +A + K+ L D + + + + + +IAW++ + +D
Sbjct: 254 AAIKQMVHWIEKAIPLAENDQQKKSLSLLVDYYRTGDLKKWDEYNIAWVQDTTATIDFAN 313
Query: 460 GPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAA 519
G E Y DAI G K ++EA + ++D ++T ++K D Q E N P+ +K K V
Sbjct: 314 GFIEVYNDAI-GMKGSYEAVLSLKDFESTKRIKAIADQAQWFEDNSPLIAEHKKKKVKGI 372
Query: 520 PIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP-IADV 578
+ I I +GD + NLPN + + K+ G+ V L N+ A ++ D
Sbjct: 373 SAKAITAIVEAGDAAPSTPIGINLPNSDWLRKEYGSKSVSLSNIIHAYNESSASSGFLDE 432
Query: 579 CIR--KEQQELVDFDSFFT--HNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEE 634
+ K+ + + F + + H HEC IG S + G T L+ S +EE
Sbjct: 433 FVNNPKKLERMKQFGNLGSDLHTDMHEC---IGHASGQINSGV-GTPDKTLKSYASCLEE 488
Query: 635 AKADIVGLWAL--KFLIGRDLLPKSLV-KSMYVSFLAGCFRS----VRFG--LEESHGKG 685
A+AD+V L+ + L+ ++P V K+ Y +++ + ++ G +EE+H +
Sbjct: 489 ARADLVALYYVMDPKLVEIGVMPSLEVGKAEYDNYMMNGLMTQLTRLKLGDNIEEAHMRN 548
Query: 686 QALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAA 737
+AL W++E+ FI + T+ D++K+ L EI I++ GD EA
Sbjct: 549 RALNAYWVYERGKNDKVVEFIKANGKTYVQINDYEKLRTLFGELLREIQRIKSEGDYEAG 608
Query: 738 SLLLQKY 744
L++ Y
Sbjct: 609 KNLVENY 615
>gi|423270797|ref|ZP_17249768.1| hypothetical protein HMPREF1079_02850 [Bacteroides fragilis
CL05T00C42]
gi|423274621|ref|ZP_17253567.1| hypothetical protein HMPREF1080_02220 [Bacteroides fragilis
CL05T12C13]
gi|392698721|gb|EIY91903.1| hypothetical protein HMPREF1079_02850 [Bacteroides fragilis
CL05T00C42]
gi|392704879|gb|EIY98013.1| hypothetical protein HMPREF1080_02220 [Bacteroides fragilis
CL05T12C13]
Length = 683
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVENYAVKVDP 617
>gi|313148717|ref|ZP_07810910.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137484|gb|EFR54844.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 683
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 150/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G ETY D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRIDFTNGFTETYGDPL-GMKASWESIVNFKDLEATRRTELISGNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPATAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYGDLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPAEEAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFAAARSLVETYAVKVDP 617
>gi|295094588|emb|CBK83679.1| Isopentenyldiphosphate isomerase [Coprococcus sp. ART55/1]
Length = 185
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E D+ G TG T RSE H G HRT + WI + ++LLQ+R+ KDS+PG
Sbjct: 2 ELFDICDEQGNPTGDTVERSEAHAKGICHRTAHIWIAKQENGRYKVLLQKRSMDKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF-LQQNVINDGK-FINNE 124
+D SSAGHI AGD + SA REL EELGIN + +F TF +Q GK F +NE
Sbjct: 62 RYDTSSAGHIQAGDEPMESALRELGEELGINAQNEDLDFAGTFRIQYEKEFHGKMFRDNE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
A V++ + + T+Q+ E+ V + E+ D F
Sbjct: 122 VAFVFVYQ--KQVDIADLTIQKEELDGVCWFDLEDTYEACKNHDQKFC 167
>gi|423251177|ref|ZP_17232192.1| hypothetical protein HMPREF1066_03202 [Bacteroides fragilis
CL03T00C08]
gi|423254503|ref|ZP_17235433.1| hypothetical protein HMPREF1067_02077 [Bacteroides fragilis
CL03T12C07]
gi|392652134|gb|EIY45796.1| hypothetical protein HMPREF1066_03202 [Bacteroides fragilis
CL03T00C08]
gi|392653825|gb|EIY47476.1| hypothetical protein HMPREF1067_02077 [Bacteroides fragilis
CL03T12C07]
Length = 683
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNNVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|336411368|ref|ZP_08591835.1| hypothetical protein HMPREF1018_03853 [Bacteroides sp. 2_1_56FAA]
gi|335942079|gb|EGN03928.1| hypothetical protein HMPREF1018_03853 [Bacteroides sp. 2_1_56FAA]
Length = 683
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|375359513|ref|YP_005112285.1| putative membrane attached peptidase [Bacteroides fragilis 638R]
gi|301164194|emb|CBW23752.1| putative membrane attached peptidase [Bacteroides fragilis 638R]
Length = 683
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|291563971|emb|CBL42787.1| ADP-ribose pyrophosphatase [butyrate-producing bacterium SS3/4]
Length = 337
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 21/171 (12%)
Query: 17 TGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDSWPGMWDISSA 73
G+ +G + R+ VH GD+HRT + W+ + +LLLQ+R+ KDS+ G +DISSA
Sbjct: 165 NGEPSGQVRERTLVHLNGDWHRTSHVWVVRRRGDGGHDLLLQKRSRGKDSFGGCYDISSA 224
Query: 74 GHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGK---------FINNE 124
GHI AG L SA REL+EELGI + V ++DG+ F N+E
Sbjct: 225 GHIPAGQDYLESALRELKEELGIAAEPEDLRLV-------GVHDGRYEGEFHGRIFKNHE 277
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
+ V+ P+ +E LQ+ EV +VK++ E+ + DP + ++
Sbjct: 278 KSHVFAYE--KPVEIEKLKLQKEEVESVKWMRIEDVLAAVKAHDPGYCLFE 326
>gi|265765826|ref|ZP_06093867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253494|gb|EEZ24959.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 683
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|423261205|ref|ZP_17242107.1| hypothetical protein HMPREF1055_04384 [Bacteroides fragilis
CL07T00C01]
gi|423267340|ref|ZP_17246322.1| hypothetical protein HMPREF1056_04009 [Bacteroides fragilis
CL07T12C05]
gi|387774447|gb|EIK36558.1| hypothetical protein HMPREF1055_04384 [Bacteroides fragilis
CL07T00C01]
gi|392698043|gb|EIY91226.1| hypothetical protein HMPREF1056_04009 [Bacteroides fragilis
CL07T12C05]
Length = 683
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|428179714|gb|EKX48584.1| hypothetical protein GUITHDRAFT_151788 [Guillardia theta CCMP2712]
Length = 256
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
++ GI++ R VH GD+HR ++ W++ + L++Q+R++ KD++PG WD+S AGH+S+
Sbjct: 75 ERAGISRQRKLVHTQGDWHRAIHIWLY-DGQGNLIIQQRSEGKDTFPGKWDVSIAGHVSS 133
Query: 79 GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND---GKFINNEFADVYLVTTLN 135
GDS + +A +E +EELG+++ K+ E++ T + G F+ NE+ D++L+
Sbjct: 134 GDSVIETAMKESKEELGLDIKKEELEYLGTIATSMAGSSPITGDFLCNEYKDIFLLKYEG 193
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
L+ EV AV + + + L
Sbjct: 194 --HLDDLKFAPEEVQAVSRVDWRSLRQQL 220
>gi|383119446|ref|ZP_09940185.1| hypothetical protein BSHG_2192 [Bacteroides sp. 3_2_5]
gi|251946681|gb|EES87058.1| hypothetical protein BSHG_2192 [Bacteroides sp. 3_2_5]
Length = 683
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|255280269|ref|ZP_05344824.1| NUDIX hydrolase [Bryantella formatexigens DSM 14469]
gi|255269360|gb|EET62565.1| hydrolase, NUDIX family [Marvinbryantia formatexigens DSM 14469]
Length = 180
Score = 96.7 bits (239), Expect = 5e-17, Method: Composition-based stats.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 10/159 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LDV+ G TG R HR G HRT + W+ E E+LLQ+R+ KDS+PG
Sbjct: 2 ELLDVVDENGCPTGRAVDRETAHREGIRHRTAHVWLMREGRNGVEVLLQKRSANKDSYPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV----FTFLQQNVINDGKFIN 122
+DISSAGHI AG L SA REL+EELG+ + + F+F + + F++
Sbjct: 62 CYDISSAGHIPAGVDFLPSALRELREELGLTAKPEELIYCGQRRFSFSTE--FHGKPFVD 119
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+ ++VY + + E LQ++EV +V+++ EE K
Sbjct: 120 RQVSNVYCI--WRDVEPENLVLQESEVESVRWMNLEECK 156
>gi|423283379|ref|ZP_17262263.1| hypothetical protein HMPREF1204_01801 [Bacteroides fragilis HMW
615]
gi|404581097|gb|EKA85803.1| hypothetical protein HMPREF1204_01801 [Bacteroides fragilis HMW
615]
Length = 683
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATHRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRIEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|260641896|ref|ZP_05413923.2| peptidase, M49 family [Bacteroides finegoldii DSM 17565]
gi|260624268|gb|EEX47139.1| peptidase family M49 [Bacteroides finegoldii DSM 17565]
Length = 682
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +LDS +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 296 ILWVKDLDSRIDFVNGFTESYGDPL-GMKASWESLVNFKDLEATRRTEIISSNAQWFEDH 354
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++K +V +VI +GD+ + NLPN I G+ V + N++
Sbjct: 355 SPVDKSFKKDEVKGVSAKVITAAILAGDLYPSTAIGINLPNANWIRAHHGSKSVTIGNIT 414
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D S T H HEC HG G + PD
Sbjct: 415 DAYNKAAHGNGFNE--EFVYSDTERQLIDAYSDLTDELHTDLHECLGHGSGKLLPGVDPD 472
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWAL----KFLIGRDLLPKSLVKSMYVSFLAGCF 671
L+ S +EEA+AD+ GL+ + + P++ Y + G
Sbjct: 473 A--------LKAYGSTIEEARADLFGLYYVADSKLLELKLLSSPEAYKAQYYTYLMNGLM 524
Query: 672 RS-VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
VR +EE+H + + L W++EK A + T+ V D+ KV
Sbjct: 525 TQLVRIEPGNNVEEAHMRNRQLIARWVYEKGAADKVVELVKKDGKTYVVINDYPKVRELF 584
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD E A L++ Y P
Sbjct: 585 GELLAEIQRIKSTGDFEGARSLVENYAVKVDP 616
>gi|417751696|ref|ZP_12399968.1| hydrolase, NUDIX family [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772525|gb|EGL49366.1| hydrolase, NUDIX family [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 178
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KTG R + + GDYH V+ +F + + L+ QR+A+ K WPG+W
Sbjct: 3 EFWDIYTANRVKTGRVMERGSLFKQGDYHLVVHICLFNDRGEMLIQQRQAE-KAGWPGLW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELG++L FT IN G+ F D
Sbjct: 62 DVTVGGSALAGETAQQAAMRELKEELGLSLDLIGVRPHFT------INFGE----GFDDT 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
+LVT + LE+ LQ+ EV AV++ E ++ D+ SF+PY + G F+++
Sbjct: 112 FLVTVPYLVDLESLVLQEEEVQAVRWANRHEILRMI--DEGSFIPY-LKGKIDLCFDMVG 168
Query: 189 Q 189
Q
Sbjct: 169 Q 169
>gi|262382360|ref|ZP_06075497.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295238|gb|EEY83169.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 686
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 161/359 (44%), Gaps = 36/359 (10%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E SE+D G ETY D + G KA++E+ + + +AT + K+ DN Q E +
Sbjct: 300 ILWVEDTASEVDFVNGFIETYGDPL-GMKASWESTVNFTNKEATKRTKIISDNAQWFEDH 358
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI + GD + NLPN + I +D G+ V ++N++
Sbjct: 359 SPVDKRFKKEKVKGVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENIT 418
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGR 617
EA K + + F + H HEC HG G T PD
Sbjct: 419 EAYDKASQGNGFSEEFVWSDVERNGMRQYGFLTDNLHTDLHECLGHGSGKLLENTDPDA- 477
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS- 673
L+ S +EE +AD+ GL+ L L+ LLP KS Y ++ +
Sbjct: 478 -------LKAYSSTLEETRADLFGLYYLADPKLVELGLLPDGEAYKSEYYKYIMNGLMTQ 530
Query: 674 -VRFGL----EESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVES 720
VR L EE+H + + L W +E K+A ++ T+ V D+ ++ +
Sbjct: 531 LVRIELGKNVEEAHMRNRQLIAKWAYEKGKKANVIELKKRDGKTYVVVNDYPRLRELFGT 590
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L EI I++ GD A L++ Y P ++ + LE +++AP VN +++
Sbjct: 591 LLAEIQRIKSEGDYAAGKNLVEGYGVKVDP-ELHAEVLERY-AKLNLAPYKGFVNPVMK 647
>gi|60682716|ref|YP_212860.1| peptidase [Bacteroides fragilis NCTC 9343]
gi|60494150|emb|CAH08942.1| putative membrane attached peptidase [Bacteroides fragilis NCTC
9343]
Length = 683
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 38/332 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D T G E+Y D + G KA++E+ + +D +AT + +L N Q E +
Sbjct: 297 ILWVKDLNSRVDFTNGFTESYGDPL-GMKASWESIVNFKDLEATRRTELISSNAQWFEDH 355
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K + V +VI GD+ + NLPN I G+ V + N++
Sbjct: 356 SPVDKQFKKEKVKGVTAKVITAAILGGDLYPSTAIGINLPNSNWIRSHHGSKSVTIGNIT 415
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N + +++L+D + T H HEC HG G + PD
Sbjct: 416 DAYNKAAHGNGFN--EEFVYSDTEKQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPD 473
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFR 672
L+ S +EEA+AD+ GL+ A L+ L+P + K+ Y ++L
Sbjct: 474 A--------LKAYGSTIEEARADLFGLYYVADPKLLELGLVPSEDAYKAEYYTYLMNGLM 525
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ VR +EE+H + + L W+FEK + T+ V D+ K+
Sbjct: 526 TQLVRVEPGNSVEEAHMRNRQLIARWVFEKGKADKVVEMVQKDGKTYVVVNDYQKLRHLF 585
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD +AA L++ Y P
Sbjct: 586 GELLAEIQRIKSTGDFDAARSLVETYAVKVDP 617
>gi|325298907|ref|YP_004258824.1| Dipeptidyl-peptidase III [Bacteroides salanitronis DSM 18170]
gi|324318460|gb|ADY36351.1| Dipeptidyl-peptidase III [Bacteroides salanitronis DSM 18170]
Length = 652
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 49/407 (12%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y++ + + L KAG+ A + S ++ D + + + + D IAW+ + S +D
Sbjct: 224 YSAAIGKIIGWLEKAGEYAENESQHEVIRLLIDFYRTGDLHTFDVYSIAWLKDTASHIDF 283
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + +L + Q E + P+D +K + V
Sbjct: 284 VNGFIESYGDPL-GMKASWESIVDFKDAEATRRTELISSHAQWFEDHSPVDARFKKEAVK 342
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD 577
+VI +GD+ + NLPN I G+ V + N++EA R
Sbjct: 343 GVSAKVITAAILAGDLYPSTAIGINLPNSNWIRSVHGSKSVTIGNLTEA----YNRAARG 398
Query: 578 VCIRKE------QQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQE 627
R+E +++L+D + T H HEC HG G LP +R
Sbjct: 399 NGFREEFVYSDVERKLLDTYADITDDLHTDLHECVGHGSGK---LLPGVDADALR----A 451
Query: 628 LHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GL 678
S +EEA+AD+ GL+ L L+ L+P + K+ Y S++ + VR +
Sbjct: 452 YGSTIEEARADLFGLYYLADAKLVEWGLVPDAEAYKAEYYSYMMNGLMTQLVRIEPGRTV 511
Query: 679 EESHGKGQALQFNWLFE--KEA----FILHSDDTFSV--DFDKVEGAVESLSTEILTIQA 730
EE+H + + L W+ E +EA ++ T+ D+ ++ L E+ I++
Sbjct: 512 EEAHMRNRQLIARWVLEQGREAKVVELVVREGKTYVRVNDYVQLRALFGKLLAEVQRIKS 571
Query: 731 RGDKEAASLLLQKYCTMTQPLKVA--LQKLENVQVPVDIAPTFTAVN 775
GD EAA L++ Y P A LQ+ E + +AP VN
Sbjct: 572 EGDYEAARRLVETYGVQIDPALHAEVLQRYERLH----LAPYKGFVN 614
>gi|330996692|ref|ZP_08320570.1| peptidase family M49 [Paraprevotella xylaniphila YIT 11841]
gi|329572764|gb|EGG54397.1| peptidase family M49 [Paraprevotella xylaniphila YIT 11841]
Length = 658
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 172/379 (45%), Gaps = 41/379 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y++ + R L KA D+A + +L + + + + D I W+ E ++ +D
Sbjct: 225 YSAAIDRIIFWLEKAADVAENGKQAEVLRKLIEFYRTGDLKTFDEYTILWVQETEAMVDF 284
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
T G ETY D + G KA++E + +D +ATA+ + N Q E + P+D+ +K +
Sbjct: 285 TNGFTETYGDPL-GLKASWEGYANFKDLEATARTEKLSANAQWFEDHSPVDDRFKKAECR 343
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP--I 575
+VI+ GD+ + NLPN + + G+ V + N+++A K +
Sbjct: 344 GVSAKVIKAAILGGDLYPASAIGINLPNSNWVRAEYGSKSVTIGNLTDAYNKAAHGNGFL 403
Query: 576 ADVCIRKEQQELVD-----FDSFFTHNICHECC-HGIGPHSITL-PDGRQSTVRLELQEL 628
+ I E L+D D H HEC HG G + PD L+
Sbjct: 404 QEFVIDDETLRLLDRYQDTCDDL--HTDLHECLGHGSGKLLPGVDPDA--------LKAY 453
Query: 629 HSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCF--RSVRF----GLE 679
+A+EEA+AD+ GL+ L L+ L P + K+ Y ++ ++VR +E
Sbjct: 454 GAAIEEARADLFGLYYLADTKLVELGLTPDAEAYKAQYYGYMMNGLLTQTVRIEPGRDIE 513
Query: 680 ESHGKGQALQFNWLFEKE-----AFILHSDDTFSV---DFDKVEGAVESLSTEILTIQAR 731
E+H + +AL W +E A ++ D V D++K+ L +EI I++
Sbjct: 514 EAHMRNRALIARWTYEHGREEGVAELVKRDGKTYVRIRDYEKLRELFGLLLSEIQRIKSE 573
Query: 732 GDKEAASLLLQKYCTMTQP 750
GD EAA L+++Y P
Sbjct: 574 GDYEAARDLVERYGVKIDP 592
>gi|291547873|emb|CBL20981.1| Isopentenyldiphosphate isomerase [Ruminococcus sp. SR1/5]
Length = 189
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E D++ G TG RS H G HRT + WI + E+LLQ+R+ KDS+PG
Sbjct: 2 ELFDIIDENGNPTGKIVERSIAHAEGIPHRTAHIWIIRRRNEKTEILLQKRSRNKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV--FTFLQQNVINDGKFINNE 124
+D SSAGHI AGD + SA REL+EELGI+ +F F + F + E
Sbjct: 62 KFDTSSAGHIQAGDEPMESALRELKEELGIHAESADLQFAGKFPISFAREFHGKIFRDEE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE-YKNLLAKDDPSFVP 173
A VY+ +P+ ++ TLQ+ EV V++ EE Y+ D VP
Sbjct: 122 IAFVYIYD--HPVEIDHLTLQKEEVEEVQWFDLEETYQQCSQHRDKFCVP 169
>gi|255087712|ref|XP_002505779.1| predicted protein [Micromonas sp. RCC299]
gi|226521049|gb|ACO67037.1| predicted protein [Micromonas sp. RCC299]
Length = 207
Score = 95.5 bits (236), Expect = 9e-17, Method: Composition-based stats.
Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG +K R VH+ +HR+V+ W+ + LQ+R+ KD++P WDIS+AGHI +GD
Sbjct: 39 TGESKTRGVVHQRKIWHRSVHVWLVDPKRSLVALQKRSPNKDTFPNRWDISAAGHIGSGD 98
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
S +A REL EELG+ ++ +F+ T + G N F D+Y++ +
Sbjct: 99 ESRPTAVRELAEELGVICVEEDLDFLGTVPAEQADLGG---CNCFEDMYVLRCDSESI-- 153
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
AF + + EVSAV ++ +E + LA DPS VP
Sbjct: 154 AFAVGEAEVSAVAWMPVKELEEKLAASDPSVVP 186
>gi|383453625|ref|YP_005367614.1| peptidase m49 family protein, dipeptidyl-peptidase III
[Corallococcus coralloides DSM 2259]
gi|380728170|gb|AFE04172.1| peptidase m49 family protein, dipeptidyl-peptidase III
[Corallococcus coralloides DSM 2259]
Length = 728
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 158/365 (43%), Gaps = 32/365 (8%)
Query: 398 YSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIELDSE 454
Y++E + + E + A P+ K L F + + D D IAW+++D +
Sbjct: 262 YAKELSRVIAHLQEAMKSA-----EPAQKAALGKLVRYFQTGSPKDWDAYNIAWLKVDPK 316
Query: 455 LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSK 514
+D +G ETY D G+K +E + RD + L G Q E LP Y+ K
Sbjct: 317 VDANLGFIETYVDP-RGHKGQWEGLVNYRDTAENQIMVLMGQKAQYFEDRLPWPEKYRRK 375
Query: 515 DVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP 574
V + I LI + + NLPN++ I + G+ VM+ NV +A P
Sbjct: 376 KVSLPVAKAINLITSHPE----PPAGINLPNEQHIREKYGSKSVMITNVMDAASAVTRLP 431
Query: 575 IADVCIR----KEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQELH 629
+A R +EQ + + HE H G L G+ +V L+E
Sbjct: 432 LALEFSRTAEDREQAQKYSVTARKWLVAFHEVLGHASGQVDPKL-KGQSPSVF--LKEYD 488
Query: 630 SAMEEAKADIVGLWALKFLIGRDLLP--KSLVKSMYVSFLAGCFRSVRF-----GLEESH 682
+ +EEA+AD+V LW +L P +++ + MY FL ++R EE H
Sbjct: 489 NTLEEARADLVALWHAFDPALAELSPDHEAIARQMYRDFLVEGLTNLRRVETGNAFEEDH 548
Query: 683 GKGQALQFNWLFEKEAF--ILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAAS 738
+G + +L EK + + T+ D+ K+ AV L ++++ I+A GD E
Sbjct: 549 QRGHHMTVTFLEEKGVVKQVTENGRTYLTIPDYAKMREAVGELLSQLMVIKATGDYEGIR 608
Query: 739 LLLQK 743
L+Q+
Sbjct: 609 ALVQE 613
>gi|224540738|ref|ZP_03681277.1| hypothetical protein BACCELL_05652 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517637|gb|EEF86742.1| hypothetical protein BACCELL_05652 [Bacteroides cellulosilyticus
DSM 14838]
Length = 681
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 192/435 (44%), Gaps = 50/435 (11%)
Query: 347 SLTEKQQEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSY 405
+T+K+ ED F+ +K + E + L+ +V I+ + + Y
Sbjct: 200 GVTQKEAED---FYNAMKDPKDETPVSYGLNSRLVKENGKIQEKIWKVGGL-----YGQA 251
Query: 406 LTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGP 461
+ + L KA +A +P K ++ + + + D I W+ +L+S +D G
Sbjct: 252 IDKIVYWLKKAEGVAENPEQKAVIAELIKFYETGDLKTFDEYAILWVKDLNSLVDFVNGF 311
Query: 462 YETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPI 521
E+Y D + G KA++E+ + +D +AT + ++ N Q E + P+D +K +V
Sbjct: 312 TESYGDPL-GMKASWESLVNFKDMEATHRTEIISGNAQWFEDHSPVDKQFKKDEVKGVSA 370
Query: 522 RVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIAD 577
+VI +GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 371 KVITAAILAGDLYPATAIGINLPNSNWIRSHHGSKSVTIGNITDAYNKAAHGNGFNE--E 428
Query: 578 VCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAM 632
+ +L+D + T H HEC HG G + PD L+ S +
Sbjct: 429 FVYSDAELQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTI 480
Query: 633 EEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESHG 683
EEA+AD+ GL+ A L+ L P + K+ Y ++L + VR +EE+H
Sbjct: 481 EEARADLFGLYYVADPKLVELGLTPNADAYKAEYYTYLMNGLMTQLVRIEPGNNVEEAHM 540
Query: 684 KGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKE 735
+ + L W+FEK A + T+ V D++K+ L +EI I++ GD +
Sbjct: 541 RNRQLIARWVFEKGAADKVVELVKKDGKTYVVVNDYEKLRALFGELLSEIQRIKSTGDYQ 600
Query: 736 AASLLLQKYCTMTQP 750
+A L++ Y P
Sbjct: 601 SAHDLVENYAVKVDP 615
>gi|422758052|ref|ZP_16811814.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322410887|gb|EFY01795.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 194
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 22/182 (12%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KTG R + + GDYH V+ +F + + L+ QR+AD K WPG+W
Sbjct: 3 ELWDIYTANRVKTGRVMERGSLFKQGDYHLVVHICLFNDRGEMLIQQRQAD-KTGWPGLW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELGI+L FT IN G+ F D
Sbjct: 62 DVTVGGSALAGETAQQAAMRELEEELGISLDLTGVRPHFT------INFGE----GFDDT 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY---------DVNGG 179
+LVT LE+ Q+ EV AV++ E ++ D+ SF+PY D+ G
Sbjct: 112 FLVTVPYLGDLESLVFQEEEVQAVRWANRHEILRMI--DEGSFIPYLKSKIDLCFDMVGQ 169
Query: 180 YG 181
YG
Sbjct: 170 YG 171
>gi|88803418|ref|ZP_01118944.1| Hydrolase of MutT (Nudix) family protein [Polaribacter irgensii
23-P]
gi|88780984|gb|EAR12163.1| Hydrolase of MutT (Nudix) family protein [Polaribacter irgensii
23-P]
Length = 180
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+LT GQ TG T +SE H+ G +H T + W F S +++LLQ+RA K +PG+
Sbjct: 2 DELIDILTPDGQPTGKTALKSEAHKNGWFHATAHIWFFT-SDKKVLLQKRALTKKVFPGI 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WDIS AGHI AG++ L A+RE+ EE+G+ L + + T + Q V + +NE
Sbjct: 61 WDISVAGHIGAGEAVLEGAKREILEEIGLKLENEDLFKIATRIHQ-VKHKNGIQDNEHHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVK 153
V++ + + + T+Q+ EV ++
Sbjct: 120 VFIAEL--KVDIASLTMQKEEVDGLE 143
>gi|427388682|ref|ZP_18884380.1| hypothetical protein HMPREF9447_05413 [Bacteroides oleiciplenus YIT
12058]
gi|425724655|gb|EKU87530.1| hypothetical protein HMPREF9447_05413 [Bacteroides oleiciplenus YIT
12058]
Length = 681
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 152/334 (45%), Gaps = 34/334 (10%)
Query: 443 DSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D I W+ +L+S +D G E+Y D + G KA++E+ + +D +AT + ++ N Q
Sbjct: 292 DYAILWVKDLNSLVDFVNGFTESYGDPL-GMKASWESLVNFKDLEATHRTEIISGNAQWF 350
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E + P+D +K +V +VI +GD+ + NLPN I G+ V +
Sbjct: 351 EDHSPVDKQFKKDEVKGVSAKVITAAILAGDLYPATAIGINLPNSNWIRSHHGSKSVTIG 410
Query: 562 NVSEAKFKNILRPIADVCIRKEQQELVDFDSFFT-----HNICHECC-HGIGPHSITL-P 614
N+++A K + EL D++ H HEC HG G + P
Sbjct: 411 NITDAYNKAAHGNGFNEEFVYSDAELKLIDNYADLTGELHTDLHECLGHGSGKLLPGVDP 470
Query: 615 DGRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCF 671
D L+ S +EEA+AD+ GL+ A L+ L P + K+ Y ++L
Sbjct: 471 DA--------LKAYGSTIEEARADLFGLYYVADPKLVELGLTPNADAYKAEYYTYLMNGL 522
Query: 672 RS--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGA 717
+ VR +EE+H + + L W+FEK A + T+ V D++K+
Sbjct: 523 MTQLVRIEPGNNVEEAHMRNRQLIARWVFEKGAADKVVEMVKKDGKTYVVVNDYEKLREL 582
Query: 718 VESLSTEILTIQARGDKEAASLLLQKYCTMTQPL 751
L +EI I++ GD +AA +++ Y P+
Sbjct: 583 FGELLSEIQRIKSTGDYQAAHDIVESYAVKVDPV 616
>gi|393784308|ref|ZP_10372473.1| hypothetical protein HMPREF1071_03341 [Bacteroides salyersiae
CL02T12C01]
gi|392666084|gb|EIY59601.1| hypothetical protein HMPREF1071_03341 [Bacteroides salyersiae
CL02T12C01]
Length = 674
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 42/334 (12%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ +L+S +D G E+Y D + G KA++E+ + +D +AT + ++ N Q E +
Sbjct: 289 ILWVKDLNSRIDFVNGFTESYGDPL-GMKASWESLVNFKDLEATHRTEVISSNAQWFEDH 347
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++ V +VI +GD+ + NLPN I G+ V + N++
Sbjct: 348 SPVDPRFRKDQVKGVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNIT 407
Query: 565 EAKFK---------NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITL- 613
+A K + A++ + +L D H HEC HG G +
Sbjct: 408 DAYNKAAHGNGFNEEFVYSDAEIALIDRYSDLTD----ELHTDLHECLGHGSGKLLPGVD 463
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGC 670
PD L+ S +EEA+AD+ GL+ A L+ LLP + K+ Y ++L
Sbjct: 464 PDA--------LKAYGSTIEEARADLFGLYYVADPKLVELGLLPSNEAYKAQYYTYLMNG 515
Query: 671 FRS--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEG 716
+ VR +EE+H + + L W+FEK A + T+ D++KV
Sbjct: 516 LMTQLVRIQPGNTVEEAHMRNRQLIARWVFEKGAADKVVELVKKDGKTYVAVNDYEKVRQ 575
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
L EI I++ GD AA L++ Y P
Sbjct: 576 LFGELLAEIQRIKSTGDFAAARALVEDYAVKVDP 609
>gi|299822219|ref|ZP_07054105.1| MutT/NUDIX family protein [Listeria grayi DSM 20601]
gi|299815748|gb|EFI82986.1| MutT/NUDIX family protein [Listeria grayi DSM 20601]
Length = 184
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 19/160 (11%)
Query: 15 TMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAG 74
+TG++ +P SE G+YH V+ IF S +LL+Q+R FK+ WPGMWD S G
Sbjct: 22 NLTGKQHFRGEPLSE----GEYHLVVHICIF-NSENQLLIQQRQRFKEGWPGMWDFSVGG 76
Query: 75 HISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTL 134
G++SL++A+RE +EELG++L VFT F D Y+VT
Sbjct: 77 SACEGETSLVAAERETREELGLDLNLKNERPVFTM----------HFKEGFDDYYIVT-- 124
Query: 135 NPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ +E TLQ++EV+AVK++ ++E ++ + +PY
Sbjct: 125 RSVDIETLTLQESEVAAVKWVDHQEATAMVEAGE--MIPY 162
>gi|372221810|ref|ZP_09500231.1| NUDIX family hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 184
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 8/170 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G TG +SE H+ G +H TV+ W F +T E+LLQ+R K + P +
Sbjct: 2 DELIDILHEDGSPTGTVLLKSEAHQRGLFHPTVHVW-FYTNTGEVLLQQRGKNKATHPLL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGHI+AG++ I+A RE+ EE+G+ + E + + +G +NEF
Sbjct: 61 WDVSVAGHIAAGEAYEIAAVREVLEEIGLTIKPKQLEKIAVVKAMHTHPNG-IQDNEFHQ 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVK---YIAYEEYKNLLAKDDPSFVPY 174
VYL +PL T Q++EV A++ + + E LA+ D ++VP+
Sbjct: 120 VYLCAL--TVPLSQLTKQESEVEALQLKPLLRFAEETWGLAQTD-AYVPH 166
>gi|308810182|ref|XP_003082400.1| MutT/nudix protein-like (ISS) [Ostreococcus tauri]
gi|116060868|emb|CAL57346.1| MutT/nudix protein-like (ISS) [Ostreococcus tauri]
Length = 884
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 11 LDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDI 70
DV T + TG R++VH G++HR+ + WI T+ ++LQ+R+ KD++PGMWDI
Sbjct: 697 FDVRTDRPRGTGALARRADVHARGEWHRSAHVWIVDAKTRAVVLQKRSMGKDTFPGMWDI 756
Query: 71 SSAGHISAGD--SSLISAQRELQEELGINLPKDAFEFVFTFL---QQNVINDGKFINNEF 125
S+AGH+SA D SL +A EL+EELG+ L + F F Q + N +
Sbjct: 757 SAAGHVSARDDGDSLRAAACELEEELGVRLSDARRDLTFQFCIPAAQAALGG----CNCY 812
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
DVY + + F L EV+A ++ + ++ + L VP
Sbjct: 813 EDVYFLRWDRDSAGDDFALGHAEVTATRWESIDDLRAALNGASDEHVP 860
>gi|288800886|ref|ZP_06406343.1| peptidase, M49 family [Prevotella sp. oral taxon 299 str. F0039]
gi|288332347|gb|EFC70828.1| peptidase, M49 family [Prevotella sp. oral taxon 299 str. F0039]
Length = 649
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 160/359 (44%), Gaps = 40/359 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E + +D G E Y D + G KA++E + +D +AT + +L DN Q E +
Sbjct: 269 IEWLKEQEGMVDFINGFIEVYSDPL-GLKASWEGLVEYKDIEATKRTRLISDNAQWFEDH 327
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+++ +K K V VI GD + NLPN + I G+ V + N++
Sbjct: 328 SPVNSQFKKKTVKGVTANVICAAMLGGDEYPSTAIGINLPNADWIRAQYGSKSVTIGNIT 387
Query: 565 EAKFKNILRPIADVCIRKEQQELVDFDSFF-----THNICHECCHGIGPHSITLPDGRQS 619
+A K D + + L + H HEC +G S L G S
Sbjct: 388 DAYNKASHGNGFDEEFVADSETLALIQQYGDKCDDLHTDLHEC---LGHGSGQLLPGVDS 444
Query: 620 TVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCFRS--V 674
L+ + +EEA+AD+ GL+ + L+ LLP K KS Y ++L + V
Sbjct: 445 NA---LKSYGNVIEEARADLFGLYYIADDKLVELGLLPNKEAHKSQYYTYLMNGLLTQLV 501
Query: 675 RFG----LEESHGKGQALQFNWLFEKE----AFILHSDDTFSV--DFDKVEGAVESLSTE 724
R +EE+H + +AL W+ + I ++ +F + D+ K+ +L E
Sbjct: 502 RINEGNDIEEAHMRNRALIARWVHKHSEGAVEIIKKNNKSFVIVNDYGKLRILFATLLAE 561
Query: 725 ILTIQARGDKEAASLLLQKYCTMTQP-----LKVALQKLENVQVPVDIAPTFTAVNKLL 778
I I++ GD EAA L+++Y +P ++ QKL ++AP VN LL
Sbjct: 562 IQRIKSEGDFEAARELVEEYAVKIEPQLHKEIRERYQKL-------NLAPYKGFVNPLL 613
>gi|410098400|ref|ZP_11293378.1| hypothetical protein HMPREF1076_02556 [Parabacteroides goldsteinii
CL02T12C30]
gi|409222274|gb|EKN15219.1| hypothetical protein HMPREF1076_02556 [Parabacteroides goldsteinii
CL02T12C30]
Length = 685
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 37/371 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIE-LDSELDV 457
Y++ + + + L KA A + + K ++ + + + + D I W+E SE+D
Sbjct: 252 YSAAIEQIAGELQKAVPFAENDTQKAIIEKLIEYYQTGDLKTFDAYSILWVEDTTSEVDF 311
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G ETY D + G KA++E+ + + +AT + K+ DN Q E + P+D +K + V
Sbjct: 312 VNGFIETYGDPL-GMKASWESTVNFINKEATKRTKIISDNAQWFEDHSPVDKRFKKEKVK 370
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIAD 577
+VI + GD + NLPN + I +D G+ V ++N++EA K +
Sbjct: 371 GVSAKVITVSMLGGDCYPATPIGINLPNADWIRRDHGSKSVTIENITEAYDKASQGNGFN 430
Query: 578 ---VCIRKEQQELVDFDSFFTHNI---CHECC-HGIGPHSITLPDGRQSTVRLELQELHS 630
+ E++ L + F T N+ HEC HG G LPD L+ S
Sbjct: 431 EEFIWSDAEREALAKY-GFLTDNLHTDLHECLGHGSGK---LLPDTESGA----LKAYDS 482
Query: 631 AMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEES 681
+EEA+AD+ GL+ L L+ L+P K+ Y ++ + VR +EE+
Sbjct: 483 TLEEARADLFGLYYLADPKLVELGLVPDGEAYKAEYYKYIMNGLMTQLVRIEAGKDVEEA 542
Query: 682 HGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGD 733
H + + L W ++ + T+ V D+ K+ +L E+ I++ GD
Sbjct: 543 HMRNRQLIAQWAYKNGKADNVIEYKKRDGKTYVVVNDYAKLRNLFGTLLAEVQRIKSEGD 602
Query: 734 KEAASLLLQKY 744
A L++ Y
Sbjct: 603 FAAGKKLVEDY 613
>gi|295110477|emb|CBL24430.1| Isopentenyldiphosphate isomerase [Ruminococcus obeum A2-162]
Length = 186
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E DV+ G TG R + H G HRT + WI E ++LLQ+R+ KDS+PG
Sbjct: 2 ELFDVIDSEGNPTGQIVSREKAHAEGIPHRTAHIWIIREKEGRVQILLQKRSQNKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINNE 124
+D SSAGHI AGD L SA REL+EELGI+ + F TF + F + E
Sbjct: 62 KFDTSSAGHIQAGDEPLESALRELKEELGISAVPEQLHFAGTFPISFAKEFHGKMFRDEE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
A VY+ P+ + LQ EV +V++ EE
Sbjct: 122 IAFVYIFN--EPVNTDELILQTEEVESVQWFDLEE 154
>gi|238925542|ref|YP_002939059.1| hydrolase of MutT (Nudix) family [Eubacterium rectale ATCC 33656]
gi|238877218|gb|ACR76925.1| hydrolase of MutT (Nudix) family [Eubacterium rectale ATCC 33656]
Length = 182
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWPG 66
E+ D++ G TG T R + HR HRT + WI ++ ++LLQ+R KDS+PG
Sbjct: 2 EYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRRRGNSIQILLQKRCMEKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINL-PKDAFEF-VFTFLQQNVINDGKFINNE 124
+DISSAGHI AG + SA REL+EELG+ + PK + + V + +F++N+
Sbjct: 62 CYDISSAGHIPAGVDYIPSALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDNQ 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+ V+L+ + T+Q+ E+ +VK+ Y E K
Sbjct: 122 ISKVFLLWL--DVDEADITVQKEEIDSVKWFDYAECK 156
>gi|404486049|ref|ZP_11021243.1| hypothetical protein HMPREF9448_01670 [Barnesiella intestinihominis
YIT 11860]
gi|404337377|gb|EJZ63831.1| hypothetical protein HMPREF9448_01670 [Barnesiella intestinihominis
YIT 11860]
Length = 683
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 199/463 (42%), Gaps = 62/463 (13%)
Query: 353 QEDATSFFTVIKRRSE-----FNLDSSL---SGHIVDATNHSVGSIYDLYSVPYSEEYNS 404
Q +A +F+ +K + + L+S L G IV+ T + VG +Y
Sbjct: 199 QAEAEAFYNKMKNPKDETPISYGLNSRLVKRDGKIVEET-YKVGGLY-----------TE 246
Query: 405 YLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIG 460
+ + L KA +A + K ++ D + + + D I W+ +LDS++D G
Sbjct: 247 AIEKIVYWLEKAAGVAENEQQKEVIEKLIDYYQTGDLKQFDEYAILWVKDLDSQVDFVNG 306
Query: 461 PYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAP 520
ETY D + G KA++E+ + ++ +A+ + DN Q E N P+D+ +K V
Sbjct: 307 FTETYGDPL-GMKASWESIVNFKNLEASERTHTISDNAQWFEDNSPVDSRFKKDKVKGVS 365
Query: 521 IRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNIL-RPIADVC 579
+VI +GD + NLPN I G+ V ++N++EA K D
Sbjct: 366 AKVITAAMLAGDCYPSTPIGINLPNSNWIRHIHGSKSVTIENITEAYEKAAQGNGFNDEF 425
Query: 580 IRKEQQELVDFDSFFT----HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAME 633
+ + + + + F H HEC HG G + PD L+ S +E
Sbjct: 426 VWSDTERNLMNNYLFQADNLHTDLHECLGHGSGKLLPGVDPDA--------LKAYSSTLE 477
Query: 634 EAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRF----GLEESHGK 684
EA+AD+ L+ + ++ LLP + K+ Y ++ + R +EESH +
Sbjct: 478 EARADLFALYYMADPKILELGLLPSEDAYKAAYYKYMMNGLMTQLTRIEPGKNIEESHMR 537
Query: 685 GQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEA 736
+ L W +E F T+ V D++K+ L E+ I++ GD E+
Sbjct: 538 NRQLIARWAYEHGKADNVVEFAKRDGKTYVVINDYEKLRSLFGKLLAEVQRIKSEGDYES 597
Query: 737 ASLLLQKYCTMT-QPL-KVALQKLENVQV-PVD--IAPTFTAV 774
L+++Y + Q L L + EN+ + P + P +T +
Sbjct: 598 GKNLVEEYGVIVDQDLHNEVLARYENLHIAPYKGFVNPVYTPI 640
>gi|291527784|emb|CBK93370.1| Isopentenyldiphosphate isomerase [Eubacterium rectale M104/1]
Length = 182
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWPG 66
E+ D++ G TG T R + HR HRT + WI ++ ++LLQ+R KDS+PG
Sbjct: 2 EYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRHRGNSIQILLQKRCMEKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINL-PKDAFEF-VFTFLQQNVINDGKFINNE 124
+DISSAGHI AG + SA REL+EELG+ + PK + + V + +F++N+
Sbjct: 62 CYDISSAGHIPAGVDYIPSALRELREELGLTIEPKQLIDCGLHRHHADEVFHGERFLDNQ 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+ V+L+ + T+Q+ E+ +VK+ Y E K
Sbjct: 122 ISKVFLLWL--DVDEADITVQKEEIDSVKWFDYAECK 156
>gi|189466848|ref|ZP_03015633.1| hypothetical protein BACINT_03224 [Bacteroides intestinalis DSM
17393]
gi|189435112|gb|EDV04097.1| peptidase family M49 [Bacteroides intestinalis DSM 17393]
Length = 681
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 169/380 (44%), Gaps = 41/380 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y + + L KA +A +P K ++ + + + D I W+ +L+S +D
Sbjct: 248 YGQVIDKIVYWLKKAEGVAENPEQKAVIAELIKFYETGDLKTFDEYAILWVKDLNSLVDF 307
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + ++ N Q E + P+D +K +V
Sbjct: 308 VNGFTESYGDPL-GMKASWESLVNFKDMEATHRTEIISGNAQWFEDHSPVDKLFKKDEVK 366
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILR 573
+VI +GD+ + NLPN I G+ V + N+++A K N
Sbjct: 367 GVSAKVITAAILAGDLYPATAIGINLPNSNWIRSHHGSKSVTIGNITDAYNKAAHGNGFN 426
Query: 574 PIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQEL 628
+ + +L+D + T H HEC HG G + PD L+
Sbjct: 427 --EEFVYSDTELQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAY 476
Query: 629 HSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLE 679
S +EEA+AD+ GL+ A L+ L P + K+ Y ++L + VR +E
Sbjct: 477 GSTIEEARADLFGLYYVADPKLVELGLTPNADAYKAEYYTYLMNGLMTQLVRIEPGNDVE 536
Query: 680 ESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQAR 731
E+H + + L W+FEK A + T+ V D+ K+ L +EI I++
Sbjct: 537 EAHMRNRQLIARWVFEKGAADKVVELVRRDGKTYVVVNDYGKLRTLFGELLSEIQRIKST 596
Query: 732 GDKEAASLLLQKYCTMTQPL 751
GD + A L++ Y P+
Sbjct: 597 GDYQGAHDLVENYAVKVDPV 616
>gi|433461872|ref|ZP_20419471.1| MutT/NUDIX family protein [Halobacillus sp. BAB-2008]
gi|432189585|gb|ELK46678.1| MutT/NUDIX family protein [Halobacillus sp. BAB-2008]
Length = 198
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E+L + G G TK R+ VH GD+H T + W + + + QRR+D K +PG+
Sbjct: 2 KEYLTIFNEDGYTAG-TKERALVHMDGDWHETFHCWFYDPKQKSVYFQRRSDDKKDYPGL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
+DI++AGHI AG+ L + RE+ EELG+++ D + + T + V+ DG I+ E
Sbjct: 61 YDITAAGHIEAGEGLLSAGCREINEELGLDIAPD--DLINTGSFKEVLIDGTVIDREICR 118
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165
V+L P+ A+ + + EV V +++ ++K+L A
Sbjct: 119 VFLYVVEEPL---AWMIGE-EVQDVVRLSFHDFKSLAA 152
>gi|441498508|ref|ZP_20980704.1| Dipeptidyl-peptidase III [Fulvivirga imtechensis AK7]
gi|441437782|gb|ELR71130.1| Dipeptidyl-peptidase III [Fulvivirga imtechensis AK7]
Length = 661
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 210/487 (43%), Gaps = 63/487 (12%)
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDA 382
L K NFY PD+ + E + + + T+ +D T + L+ +V
Sbjct: 169 LLKGSAVNFYAPDITEEEVDAFYA--TKVDTKDPTPVWY------------GLNSRMVKE 214
Query: 383 TNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN-- 440
+Y + + Y + + + L KA +A + K+ L + + + +
Sbjct: 215 NGELKEQVYKIDGL-----YGPAIEKITYWLEKATTVAENEPQKKALELLIEYYKTGDLK 269
Query: 441 -YYDSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
+ + +IAW+ + ++D G E Y D + GY+ ++E+ I I+D +A+ ++ N
Sbjct: 270 TWDEYNIAWVNATEGDIDYINGFIEVYNDPM-GYRGSYESIIEIKDFEASERMATLSANA 328
Query: 499 QVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMV 558
Q E N P+ + K ++V+ +V+ + +GD + NLPN + I G+ V
Sbjct: 329 QWFEDNAPILDENKKENVVGITYKVVNVAGEAGDASPSTPIGVNLPNSDWIRAQHGSKSV 388
Query: 559 MLKNV----SEAKFKNILRPIA----DVCIRKEQQELVDFDSFFTHNICHECCHGIGPHS 610
L N+ A +L + ++ KE EL D H HE IG S
Sbjct: 389 SLGNIVSAYDGASGTGMLEEFSYSEEEIKRAKEYSELGD----KLHTALHEV---IGHAS 441
Query: 611 ITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKSLV-KSMYVSFL 667
L +G T + L+ SA+EE +AD++ L+ L L+ L+P V K Y S++
Sbjct: 442 GKLNEGV-GTPKETLKSYASALEEGRADLIALYYLMDPKLVELGLIPSLEVGKEEYDSYI 500
Query: 668 AGC----FRSVRFG--LEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDK 713
R ++ G +EE+H + + + W +EK E F V D++K
Sbjct: 501 KNGLMLQLRRLQPGEVIEEAHMRNRQMIAQWAYEKGKEDNVIEKKTKDGKTYFVVNDYEK 560
Query: 714 VEGAVESLSTEILTIQARGDKEAASLLLQKY-CTMTQPL-KVALQKLENVQVPVDIAPTF 771
+ L EI I++ GD EA L++ Y + Q L K LQ+ E ++ AP
Sbjct: 561 LRTLFGELLKEIQRIKSEGDYEAGKNLIENYGVQVDQELHKEVLQRAEKLKT----APYG 616
Query: 772 TAVNKLL 778
+N +L
Sbjct: 617 GFINPVL 623
>gi|423223967|ref|ZP_17210435.1| hypothetical protein HMPREF1062_02621 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392637200|gb|EIY31074.1| hypothetical protein HMPREF1062_02621 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 681
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 192/435 (44%), Gaps = 50/435 (11%)
Query: 347 SLTEKQQEDATSFFTVIKR-RSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSY 405
+T+K+ ED F+ +K + E + L+ +V I+ + + Y
Sbjct: 200 GVTQKEAED---FYNAMKDPKDETPVSYGLNSRLVKENGKIQEKIWKVGGL-----YGQA 251
Query: 406 LTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGP 461
+ + L KA +A +P K ++ + + + D I W+ +L+S +D G
Sbjct: 252 IDKIVYWLKKAEGVAENPEQKAVIAELIKFYETGDLKTFDEYAILWVKDLNSLVDFVNGF 311
Query: 462 YETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPI 521
E+Y D + G KA++E+ + +D +AT + ++ N Q E + P+D +K +V
Sbjct: 312 TESYGDPL-GMKASWESLVNFKDMEATHRTEIISGNAQWFEDHSPVDKQFKKDEVKGVSA 370
Query: 522 RVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIAD 577
+VI +GD+ + NLPN I G+ V + N+++A K N +
Sbjct: 371 KVITAAILAGDLYPATAIGINLPNSNWIRSHHGSKSVTIGNITDAYNKAAHGNGFNE--E 428
Query: 578 VCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQELHSAM 632
+ +L+D + T H HEC HG G + PD L+ S +
Sbjct: 429 FVYSDAELQLIDKYADLTGELHTDLHECLGHGSGKLLPGVDPDA--------LKAYGSTI 480
Query: 633 EEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRF----GLEESHG 683
EEA+AD+ GL+ A L+ L P + K+ Y ++L + VR +EE+H
Sbjct: 481 EEARADLFGLYYVADPKLVELGLTPNEDAYKAEYYTYLMNGLMTQLVRIEPGNNVEEAHM 540
Query: 684 KGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKE 735
+ + L W+FEK A + T+ V D++K+ L +EI I++ GD +
Sbjct: 541 RNRQLIARWVFEKGAADKVVELVKKDGKTYVVVNDYEKLRELFGELLSEIQRIKSTGDYQ 600
Query: 736 AASLLLQKYCTMTQP 750
+A L++ Y P
Sbjct: 601 SAHDLVESYAVKVDP 615
>gi|354603725|ref|ZP_09021719.1| hypothetical protein HMPREF9450_00634 [Alistipes indistinctus YIT
12060]
gi|353348650|gb|EHB92921.1| hypothetical protein HMPREF9450_00634 [Alistipes indistinctus YIT
12060]
Length = 681
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 41/329 (12%)
Query: 446 IAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I+W++ S++D G ETY D + GY+A++E+ + RD++AT + + Q E +
Sbjct: 294 ISWVQDTLSKVDFVNGFIETYGDPL-GYRASWESLVNFRDEEATRRTETISAEAQWFEDH 352
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D Y+ + V +VI GD + NLPN + I KD G+ V ++N++
Sbjct: 353 SPIDPKYRKEKVKGVSAKVITATMLGGDCFPATPIGINLPNADWIRKDYGSKSVTIQNIT 412
Query: 565 E-----AKFKNILRPI----ADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPD 615
AK L AD+ ++K+ L D H HEC +G S L
Sbjct: 413 HAYTEAAKGNGFLEEFIPDPADIELQKKYGSLGD----DLHTDLHEC---LGHGSGQLAP 465
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPK-SLVKSMYVSFLAGCFR 672
G ++ L+ S +EEA+AD+ L+ L L L+P + K+ Y+ ++
Sbjct: 466 GVKTDA---LKNYGSTLEEARADLFALYYLGDPKLAELGLVPSFDVAKAQYLRYILNGMM 522
Query: 673 S----VRFG--LEESHGKGQALQFNWLFEK------EAFI--LHSDDTFSV---DFDKVE 715
+ ++ G +EE+H + + L W +EK EA I + D + D++K+
Sbjct: 523 TQLARIQPGKDVEEAHMRNRMLIAMWCYEKGQQGGGEAVIKKVERDGKTYIEITDYEKLR 582
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
G + EI I++ GD A L++ Y
Sbjct: 583 GLFGDMLHEIQRIKSEGDYAAGKALVENY 611
>gi|449016363|dbj|BAM79765.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 257
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 22/185 (11%)
Query: 7 QEEHLDVLTMTGQKTGITKP-RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ E DVL T T + K R EVHR GD+HR V+ W++ ++ +LLQ R+ KD+ P
Sbjct: 60 KPEWFDVLDQTDLHTIVGKKLRHEVHRDGDWHRAVHVWLYDPASDAVLLQLRSAAKDTHP 119
Query: 66 GMWDISSAGHISAGDSSL-ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNE 124
WD+S+AGH+ +G+ L +A+REL+EELGI + E +FT + V D + E
Sbjct: 120 LCWDVSAAGHLHSGEHDLSTAAKRELEEELGIGSVEP--ELLFTVRSEYV--DDHLRDRE 175
Query: 125 FADVYLV-------TTLNPIPLEA---------FTLQQTEVSAVKYIAYEEYKNLLAKDD 168
VY+V T N +A F LQ+ EV V+++ EY + +
Sbjct: 176 VQSVYVVCIPGAATATANADEADALGTSATSHTFLLQKEEVEQVRWMPLSEYLAAVEQHR 235
Query: 169 PSFVP 173
+VP
Sbjct: 236 AGYVP 240
>gi|390947678|ref|YP_006411438.1| topoisomerase IA [Alistipes finegoldii DSM 17242]
gi|390424247|gb|AFL78753.1| topoisomerase IA [Alistipes finegoldii DSM 17242]
Length = 662
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 36/332 (10%)
Query: 445 DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
+I W+ + S +D G E Y D + G KA++E + D +A + ++ +N Q E
Sbjct: 277 NIGWVKDTVSNVDFVNGFIEDYGDPL-GRKASWEGIVDFMDKEACHRTEVISENAQWFED 335
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV 563
+ P+D Y+ + V +VI + GD + NLPN + I K+ G+ V + N+
Sbjct: 336 HSPVDPRYRKEKVKGVSAKVITVAMLGGDCYPATPIGINLPNADWIRKEYGSKSVTIDNI 395
Query: 564 S----EAKFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPD 615
+ A N + +R + + ++D H HEC HG G + +
Sbjct: 396 TYAYDMAAHGNGFN--EEFVLRADDRAVMDKYGKLADDLHTDLHECLGHGSGQLAPGVKG 453
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPK-SLVKSMYVSFLAGCFR 672
G EL+ S +EE +AD+ GL+ L ++ L+P + K+ Y ++
Sbjct: 454 G-------ELKSYSSTLEETRADLFGLYYLGDPKMVELGLVPSFDVAKAGYAKYILNGMM 506
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ R +EESH + + L W +E+ + + T+ V D++K+ G
Sbjct: 507 TQLARIEPGKNVEESHMRNRKLICEWCYERGKADNVIEMVRENGKTYVVVNDYEKLRGLF 566
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
+ EI I++ GD EA L+++Y P
Sbjct: 567 GDMLREIQRIKSEGDYEAGRALVERYAVQVDP 598
>gi|334366175|ref|ZP_08515115.1| peptidase family M49 [Alistipes sp. HGB5]
gi|313157614|gb|EFR57029.1| peptidase family M49 [Alistipes sp. HGB5]
Length = 671
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 36/332 (10%)
Query: 445 DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
+I W+ + S +D G E Y D + G KA++E + D +A + ++ +N Q E
Sbjct: 286 NIGWVKDTVSNVDFVNGFIEDYGDPL-GRKASWEGIVDFMDKEACHRTEVISENAQWFED 344
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV 563
+ P+D Y+ + V +VI + GD + NLPN + I K+ G+ V + N+
Sbjct: 345 HSPVDPRYRKEKVKGVSAKVITVAMLGGDCYPATPIGINLPNADWIRKEYGSKSVTIDNI 404
Query: 564 S----EAKFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPD 615
+ A N + +R + + ++D H HEC HG G + +
Sbjct: 405 TYAYDMAAHGNGFN--EEFVLRADDRAVMDKYGKLADDLHTDLHECLGHGSGQLAPGVKG 462
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPK-SLVKSMYVSFLAGCFR 672
G EL+ S +EE +AD+ GL+ L ++ L+P + K+ Y ++
Sbjct: 463 G-------ELKSYSSTLEETRADLFGLYYLGDPKMVELGLVPSFDVAKAGYAKYILNGMM 515
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ R +EESH + + L W +E+ + + T+ V D++K+ G
Sbjct: 516 TQLARIEPGKNVEESHMRNRKLICEWCYERGKADNVIEMVRENGKTYVVVNDYEKLRGLF 575
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
+ EI I++ GD EA L+++Y P
Sbjct: 576 GDMLREIQRIKSEGDYEAGRALVERYAVQVDP 607
>gi|303237258|ref|ZP_07323828.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
gi|302482645|gb|EFL45670.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
Length = 656
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 189/428 (44%), Gaps = 49/428 (11%)
Query: 353 QEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASEL 412
QE+ F+T K+++ D LS + G IY+ + +Y + +
Sbjct: 178 QEEVEHFYTNQKQQAS---DKGLSFGLNTTLVKKNGKIYE-EVWKLNGKYGKIIEKIIYW 233
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L+KA + K+++ + + + +D D IAW+ E + ++D G E Y DA
Sbjct: 234 LNKATTYTENDDQKKIIRLLVHYYTTGDLHDFDKYSIAWVKEHNGQIDFINGFIEVYGDA 293
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G K ++E + +D KAT + +L N Q E N P++ +K K V V+
Sbjct: 294 L-GLKGSWEGIVHYKDLKATKRTQLISSNAQWFEDNSPVNEEFKKKVVKGVTANVVCAAM 352
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP----IADVCIRKEQ 584
GD + NLPN + I + G+ V + N++ A N+ I + I
Sbjct: 353 LGGDEYPASAIGINLPNADWIRAEHGSKSVTISNLTHA--YNVAAKGNGFIEEFAIDAAT 410
Query: 585 QELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIV 640
+L+ + T H HEC HG G LP+ L+ + +EEA+AD+
Sbjct: 411 CDLIAKHADLTDELHTDLHECLGHGSGK---LLPETDSDA----LKNYGNTIEEARADLF 463
Query: 641 GLW--ALKFLIGRDLL-PKSLVKSMYVSFLAGCFRS----VRFG--LEESHGKGQALQFN 691
GL+ A K LI LL + K+ Y S++ + ++ G +EESH + +AL
Sbjct: 464 GLYYIADKKLIELGLLHSEEAYKAQYYSYIMNGLMTQLARIKAGKMIEESHMQNRALIAR 523
Query: 692 WLFEKEA------FI----LHSDDTFSV----DFDKVEGAVESLSTEILTIQARGDKEAA 737
W FE F+ ++SD T + D++K+ EI I++ GD +AA
Sbjct: 524 WAFELGKVHNVIEFVQNKEINSDKTKTYIRINDYEKLREIFAQQLAEIQRIKSCGDFDAA 583
Query: 738 SLLLQKYC 745
+L++ Y
Sbjct: 584 RMLVETYA 591
>gi|386316054|ref|YP_006012218.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323126341|gb|ADX23638.1| putative nudix hydrolase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 178
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KTG R + + GDYH V+ +F + + L+ QR+A+ K W G+W
Sbjct: 3 EFWDIYTANRVKTGRVMERGSLFKQGDYHLVVHICLFNDRGEMLIQQRQAE-KAGWLGLW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELG++L FT IN G+ F D
Sbjct: 62 DVTVGGSALAGETAQQAAMRELKEELGLSLDLTGVRPHFT------INFGE----GFDDT 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
+LVT + LE+ LQ+ EV AV++ E ++ D+ SF+PY + G F+++
Sbjct: 112 FLVTVPYLVDLESLVLQEEEVQAVRWANRHEILRMI--DEGSFIPY-LKGKIDLCFDMVG 168
Query: 189 Q 189
Q
Sbjct: 169 Q 169
>gi|291524173|emb|CBK89760.1| Isopentenyldiphosphate isomerase [Eubacterium rectale DSM 17629]
Length = 182
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 6/157 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWPG 66
E+ D++ G TG T R + HR HRT + WI + ++LLQ+R KDS+PG
Sbjct: 2 EYFDIVDEQGNPTGQTVERKQAHRNNILHRTAHVWIVRHRGDSIQILLQKRCMEKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINL-PKDAFEF-VFTFLQQNVINDGKFINNE 124
+DISSAGHI AG + SA REL EELG+ + PK + + V + +F++N+
Sbjct: 62 CYDISSAGHIPAGVDYIPSALRELNEELGLTIEPKQLIDCGLHRHHADEVFHGERFLDNQ 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+ V+L+ + T+Q+ E+ +VK+ Y E K
Sbjct: 122 ISKVFLLWL--DVDEADITVQKEEIDSVKWFDYAECK 156
>gi|291515843|emb|CBK65053.1| Peptidase family M49 [Alistipes shahii WAL 8301]
Length = 665
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 445 DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
+I W+ + S +D G E Y D + G KA++EA + D +A + ++ DN Q E
Sbjct: 280 NIGWVKDTVSNVDFVNGFIEDYGDPL-GRKASWEANVNFMDTEACHRTEVISDNAQWFED 338
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV 563
+ P+ AY+ V +VI + GD + NLPN + I K+ G+ V + N+
Sbjct: 339 HSPVAEAYRKPVVRGVSAKVITVAMLGGDCYPATPIGINLPNADWIRKEYGSKSVTIDNI 398
Query: 564 S----EAKFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPD 615
+ A N + +R E +E ++ H HEC HG G + +
Sbjct: 399 TYAYDMAAHGNGFN--EEFVLRAEDRERMERYGKLADDLHTDLHECLGHGSGQLAPGVKG 456
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPK-SLVKSMYVSFLAGCFR 672
G EL+ S +EE +AD+ GL+ L L+ L+P + K+ Y ++
Sbjct: 457 G-------ELKSYGSTLEETRADLFGLYYLGDPKLVELGLIPSLDVAKAGYAKYILNGMM 509
Query: 673 S--VRF----GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAV 718
+ R +EESH + + L W +E+ + + T++V DF K+
Sbjct: 510 TQLARIEPGKNVEESHMRNRKLICEWCYERGKADKVIELVKENGKTYAVVNDFGKLRDLF 569
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
+ E+ I++ GD EA L+++Y P
Sbjct: 570 GQMLREVQRIKSEGDYEAGKTLVEQYAVTVDP 601
>gi|429741090|ref|ZP_19274759.1| peptidase family M49 [Porphyromonas catoniae F0037]
gi|429159759|gb|EKY02256.1| peptidase family M49 [Porphyromonas catoniae F0037]
Length = 923
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 194/454 (42%), Gaps = 63/454 (13%)
Query: 329 ANFYPPDMDKMEFELWKSS----LTEKQQEDATSFFTVIKRRSEFNLDSSLS----GHIV 380
ANFY P + + E E + LTE++Q S L+S L+ G +
Sbjct: 189 ANFYSPGVTQQEAETFYREAYEVLTEEEQTTPPSL----------GLNSRLARREDGKLY 238
Query: 381 DATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN 440
+ T + +G +YD L+ S LH A A + + + D + + +
Sbjct: 239 EQT-YRIGGLYD-----------EALSLISAELHAALPYAEGERQRETILALLDYYKTGD 286
Query: 441 ---YYDSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGD 496
Y I+W+ + +E+D G E Y D + G K +E+ + IR+ +A+ + +
Sbjct: 287 LEEYNRCMISWVGDTQTEVDFINGFTEVYTDPL-GMKGMWESLVHIRNHEASKRTEKLCR 345
Query: 497 NLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTS 556
E++ P+D +K ++ V+ + +GD + NLPN + I G+
Sbjct: 346 EAAWFEKHAPIDERFKKEEPRGVTATVVSVAMLAGDSYPATPIGINLPNADWIRATHGSK 405
Query: 557 MVMLKNVSEAKFKNILR--PIADVCIRKEQQE--LVDFDSF--FTHNICHECC-HGIGPH 609
V + N+ EA ++ R + +V I + L +D+ H HEC HG G
Sbjct: 406 SVTIDNIHEA-YREASRHSGMDEVFIPNPEVRALLAKYDNLTDHLHTDLHECLGHGSG-- 462
Query: 610 SITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLP-KSLVKSMYVSF 666
L G + L HS +EEA+AD+ L+ + + LI +LLP K+ Y +
Sbjct: 463 --RLLPGVSADA---LGAYHSTLEEARADLFALYYMADEKLIELELLPDHEAYKACYYRY 517
Query: 667 LAGCFRS----VRFG--LEESHGKGQALQFNWLFEK----EAFILHSDDTFSVDFDKVEG 716
L + +R G LEE+H + +AL ++ E A L + D+ +
Sbjct: 518 LLNGLVTQLVRIRPGHQLEEAHMRNRALIARYVLEHGEAIGALELRGLELIIHDYAAIRP 577
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
+ L E+ I++ GD EA LL+++Y P
Sbjct: 578 IIGELLREVQRIKSTGDHEAGRLLVERYAISVDP 611
>gi|253579673|ref|ZP_04856942.1| NUDIX family hydrolase [Ruminococcus sp. 5_1_39B_FAA]
gi|251849174|gb|EES77135.1| NUDIX family hydrolase [Ruminococcus sp. 5_1_39BFAA]
Length = 186
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E DV+ G G R + H G HRT + WI E ++LLQ+R+ KDS+PG
Sbjct: 2 ELFDVIDSKGNPAGQIVSREKAHAEGIPHRTAHIWIIRKKEGRVQILLQKRSQNKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINNE 124
+D SSAGHI AGD L SA REL+EELGI+ + F TF + F + E
Sbjct: 62 KFDTSSAGHIQAGDEPLESALRELKEELGISATPEQLHFAGTFPISFAKEFHGKMFRDEE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSF-VPYDVNGGYG 181
A VY+ P+ LQ EV V++ EE K F VP GG G
Sbjct: 122 IAFVYIYQ--EPVNTAELVLQTEEVEEVQWFDLEEVYEQCGKRREIFCVP---EGGLG 174
>gi|379721364|ref|YP_005313495.1| hydrolase [Paenibacillus mucilaginosus 3016]
gi|378570036|gb|AFC30346.1| hydrolase [Paenibacillus mucilaginosus 3016]
Length = 217
Score = 92.8 bits (229), Expect = 7e-16, Method: Composition-based stats.
Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 13/165 (7%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQE--LLLQRRADFK 61
VQEE D+ Q G T R EVH G +HRT WI+ AE E +L Q R K
Sbjct: 3 VQEEQFDIYDKDMQPIG-TASREEVHAKGWWHRTFQCWIWDAAEPAGEGSILFQERHPGK 61
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFI 121
D++PG+ DIS AGH+ AG+ S+ RELQEELG+ +P D F +++ + G+ +
Sbjct: 62 DTFPGLLDISCAGHLLAGE-SVEDGVRELQEELGVEVPFDRLISCGIFAEEDELPGGR-M 119
Query: 122 NNEFADVYLVTTLNPI--PLEAFTLQQTEVSAVKYIAYEEYKNLL 164
+ EF V+++ P+ PLE++ LQ+ EV+ + + ++ L+
Sbjct: 120 DREFCHVFVL----PLSRPLESYRLQEDEVTGLYRMPLPVFRRLV 160
>gi|328875997|gb|EGG24361.1| dipeptidyl-peptidase III [Dictyostelium fasciculatum]
Length = 654
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 21/316 (6%)
Query: 445 DIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
+I W+ +S +D +G E Y D + G +A +E + + K TA + GDN EQ
Sbjct: 279 NIHWVGDNSVVDFILGFIEVYTDPM-GLRAQYEGSVYWKHQKLTASISKIGDNAHYFEQR 337
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
+P D YK KD+ + V+ ++ G + + NLPN+E I + G+ ++L+N +
Sbjct: 338 MPWDEKYKKKDIKPISLNVVMVVAGVGGMGPGCILGVNLPNEESIREQHGSKSIVLQNNA 397
Query: 565 EAKFKNILRPI-ADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHS--ITLPDGRQSTV 621
+A + + + A+ C +++ ++ F N+ +G S +PD
Sbjct: 398 QASDEGLGESMTAEFCWDQQEIDMEKQYGTFADNLATALHEALGHASGLCVVPDPSAC-- 455
Query: 622 RLELQELHSAMEEAKADIVGLWALK-------FLIGRDLLPKSLVKSMYVSFLAGCFRSV 674
L +S +EEA+AD+V LW + ++ D + K+L + + L +
Sbjct: 456 ---LPGYYSTLEEARADLVALWHIYDPKLVELGIVDSDEIGKTLYRQQIRTVLVQLRKID 512
Query: 675 RFGLEESHGKGQALQFNWLFEKEAFILHSD---DTFS--VDFDKVEGAVESLSTEILTIQ 729
LEE H K + L N++ + + + T+ VD+ + V L +EI+ I+
Sbjct: 513 GDKLEEDHMKNRQLIANYIIQNSKSVEKRERDGKTYYVIVDYKEAHRQVGILLSEIMRIK 572
Query: 730 ARGDKEAASLLLQKYC 745
A GD AA L+ Y
Sbjct: 573 AEGDLPAAQKLVDTYA 588
>gi|304382438|ref|ZP_07364937.1| M49 family peptidase [Prevotella marshii DSM 16973]
gi|304336446|gb|EFM02683.1| M49 family peptidase [Prevotella marshii DSM 16973]
Length = 656
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 163/362 (45%), Gaps = 46/362 (12%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ E ++D G E Y D + G K ++E + +D +AT + + N Q E +
Sbjct: 276 IAWVKEQSGDIDFVNGFIEVYGDPL-GLKGSWEGIVEYKDKEATLRTQTISRNAQWFEDH 334
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+DN +K K V + GD + NLPN + I + G+ V + N++
Sbjct: 335 SPIDNRFKKKIVKGVSAHAVCAAMLGGDEYPSTAIGINLPNADWIRAEYGSKSVTIVNLT 394
Query: 565 EAKFKNILRP--IADVCIRKEQQELVDFDSFFT---HNICHECCHGIGPHSITLPDGRQS 619
EA K + + I L+D H HEC +G S L G
Sbjct: 395 EAYNKAAKGNGFLEEFVIDSPTLALIDRYGDLCDDLHTDLHEC---LGHGSGQLLTGVDP 451
Query: 620 TVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPK-SLVKSMYVSFLAGCF--RSV 674
V L+ + +EEA+AD+ GL+ + + L+ +LLP ++ Y +++ ++V
Sbjct: 452 DV---LKAYGNTIEEARADLFGLYYMADEKLVELNLLPNIEAHRAHYYTYMMNGLLTQTV 508
Query: 675 R--FG--LEESHGKGQALQFNWLFEKEAFILHSDDTFSV------------DFDKVEGAV 718
R FG +EE+H + +AL NW +E+ +D +V D+ ++
Sbjct: 509 RIEFGDNIEEAHMRNRALIANWCYEQ------GEDAIAVVEREGKHYLQINDYKRLRSLF 562
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPL--KVALQKLENVQVPVDIAPTFTAVNK 776
+L EI I++ GD AA L+++Y P+ + L++ E++ +AP +N
Sbjct: 563 ATLLREIQRIKSEGDFNAAKELVERYAVRINPVWHREILERYEHLH----LAPYKGFINP 618
Query: 777 LL 778
+L
Sbjct: 619 VL 620
>gi|212551085|ref|YP_002309402.1| dipeptidyl-peptidase III [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549323|dbj|BAG83991.1| dipeptidyl-peptidase III [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 669
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 208/470 (44%), Gaps = 60/470 (12%)
Query: 306 TKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKR 365
K VN GL+ A+ N+Y D+ ++E E F++ +K
Sbjct: 162 AKKVNQNSGLDVIAT------SANNYYGEDITQVEVE---------------QFYSAMKT 200
Query: 366 RSEFN-LDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPS 424
+ + L+ +V +Y + + Y+S + + L +A A +
Sbjct: 201 STNITPITYGLNSRLVKKNGFLTEEVYKIGGL-----YSSAIEQIVYWLKEASQYAENRL 255
Query: 425 LKRLLHSKADAFLSN---NYYDSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFI 480
KR++ S + + + Y + I W++ S +D G E+Y D++ G KA++E+ +
Sbjct: 256 QKRVILSLIEYYQTGCLEKYDEYAIQWVQDTVSRVDFVNGFIESYGDSL-GIKASWESIV 314
Query: 481 GIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVA 540
+ +ATA +L +N Q E + P+ + +K K+V ++VI + GD +
Sbjct: 315 NFKSLEATAFFQLISNNAQWFEDHSPVASQFKKKEVKGVSVKVITVSILGGDCYPSTPIG 374
Query: 541 FNLPNDERIVKDRGTSMVMLKNVSEA--KFKNILRPIADVCIRKEQQELVDFDSFFT--- 595
NLPN + I KD G+ V++ N+ +A K + I + +++++L+ T
Sbjct: 375 VNLPNSDWIRKDYGSKSVIISNIIDAYDKASSGNGFIDEFVYGEQEKKLIKQYGSRTDNL 434
Query: 596 HNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDL 653
H HEC +G S L G S V L+ S +EEA+AD+ GL+ + ++ L
Sbjct: 435 HTALHEC---LGHASGQLLPGVDSDV---LRIYGSTIEEARADLFGLYYIPDDKMLDLGL 488
Query: 654 LPK-SLVKSMYVSFLAGC----FRSVRFG--LEESHGKGQALQFNWLFEK------EAFI 700
LP K+ Y FL ++ G +EE+H + +AL +++ + I
Sbjct: 489 LPTPEAYKAEYYKFLMNGSITQLARIKLGKEIEEAHMRSRALISHYILDVGYDEDIARLI 548
Query: 701 LHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMT 748
S T+ V +++K+ + L I I++ GD A +++KY +
Sbjct: 549 RESGKTYVVINNYEKMRELIGKLLARIQRIKSEGDFNDAQYIVEKYAVLV 598
>gi|305667283|ref|YP_003863570.1| NUDIX family hydrolase [Maribacter sp. HTCC2170]
gi|88709330|gb|EAR01563.1| Hydrolase of MutT (Nudix) family protein [Maribacter sp. HTCC2170]
Length = 189
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Query: 4 SVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDS 63
++ +E +D+L G T T +S+ H+ G +H TV+ W + ++ + +L+Q+R +FKD+
Sbjct: 5 NIKMDELVDILDDEGNFTDQTTMKSKAHKHGLFHPTVHVWFYTKNAR-VLIQQRGEFKDT 63
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
P +WD+S AGHI AG+ ISA RE+ EE+G+ + K+ + + F N+ + I+
Sbjct: 64 HPLLWDVSVAGHIGAGEDFEISAIREVSEEIGLEITKNQLQKIGVFKSVQKHNE-ELIDC 122
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY--KNLLAKDDPSFVPYDVN 177
EF YL +PL Q +EV + I + + + +VP+D++
Sbjct: 123 EFHHTYLCEL--KVPLNQLKKQDSEVEDIALIPLTRFAEETWGMANIKKYVPHDID 176
>gi|303272049|ref|XP_003055386.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463360|gb|EEH60638.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 86
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/76 (53%), Positives = 58/76 (76%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG TKPR+ VHR D+HR+V+ W+ +TQ++ LQ+R+ KD++P +WDIS+AGHI +G
Sbjct: 11 TGETKPRALVHRDADWHRSVHVWLIDRATQKVALQKRSAKKDTFPNLWDISAAGHIESGH 70
Query: 81 SSLISAQRELQEELGI 96
S +A REL+EELGI
Sbjct: 71 DSRDTAVRELEEELGI 86
>gi|336428260|ref|ZP_08608244.1| hypothetical protein HMPREF0994_04250 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336006496|gb|EGN36530.1| hypothetical protein HMPREF0994_04250 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 188
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E D+ T G+ TG K RS VHR GD+H T + W+ E+LLQ+R+ K+++PG
Sbjct: 2 EMFDIRTPEGEPTGEVKERSAVHRDGDWHGTAHIWLVRRKNGKIEVLLQKRSRLKETFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEF--VFTFLQQNVINDGKFINNE 124
+D S AGH+SAGDS + A RELQEELG+ ++ ++ ++ E
Sbjct: 62 CYDASCAGHLSAGDSFIQGALRELQEELGLEAKEEDLFLGGIYPCQVDEWFGGIHILDRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV--PYDVNGGYGQ 182
+ VYL P+ E LQ+ EV V +I +E K L A P + P++ +
Sbjct: 122 ISAVYLYD--KPVKEEELKLQEEEVEGVCWIEFERLKELAAAGTPEYCIFPWETDA---- 175
Query: 183 LFNIISQRYK 192
L + +RY+
Sbjct: 176 LEDAFRKRYR 185
>gi|189462631|ref|ZP_03011416.1| hypothetical protein BACCOP_03323 [Bacteroides coprocola DSM 17136]
gi|189430792|gb|EDU99776.1| peptidase family M49 [Bacteroides coprocola DSM 17136]
Length = 652
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 197/440 (44%), Gaps = 67/440 (15%)
Query: 353 QEDATSFFTVIKRRSE-----FNLDSSL---SGHIVDATNHSVGSIYDLYSVPYSEEYNS 404
Q++A +F+ K+ + + ++S L +GH+ + VG +Y +S
Sbjct: 179 QQEAEAFYAAQKKADDQEPVMYGMNSRLVKENGHVYEQV-WKVGGMY-----------SS 226
Query: 405 YLTRASELLHKAGDMASSPSLK---RLL---HSKADAFLSNNYYDSDIAWI-ELDSELDV 457
+ + L KA D+A + + + RLL + D L + Y IAW+ + DS +D
Sbjct: 227 AIEKIISWLQKAEDVAENDAQREVIRLLIEFYRTGDLKLFDAY---SIAWLKDTDSLVDF 283
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + + N Q E + P+D +K +V
Sbjct: 284 VNGFIESYGDPL-GMKASWESIVNFKDMEATHRTETISSNAQWFEDHSPVDARFKKTEVK 342
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILR 573
+VI +GD+ + NLPN I G+ V + N+++A K N R
Sbjct: 343 GVSAKVITAAILAGDLYPSTAIGINLPNSNWIRSVHGSKSVTIGNLTDAYNKAARGNGFR 402
Query: 574 PIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PDGRQSTVRLELQEL 628
+ + +++L++ + T H HEC HG G + PD L+
Sbjct: 403 E--EFVYSETERQLLEKYADITDDLHTDLHECLGHGSGKLLPGVDPDA--------LKAH 452
Query: 629 HSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLE 679
S +EEA+AD+ GL+ L +I L+P + K+ Y S++ + VR +E
Sbjct: 453 GSTIEEARADLFGLYYLPDAKMIELGLVPDAEAYKAEYYSYMMNGLMTQLVRIEPGCTVE 512
Query: 680 ESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAVESLSTEILTIQAR 731
E+H + + L W E +++ D V D+ K+ L EI I++
Sbjct: 513 EAHMRNRQLIARWALEHGQAEHVVEMVNRDGKTYVRINDYAKLRMLFGKLLAEIQRIKSE 572
Query: 732 GDKEAASLLLQKYCTMTQPL 751
GD EAA L++ Y P+
Sbjct: 573 GDYEAARQLVETYAVQVDPV 592
>gi|373462274|ref|ZP_09554002.1| hypothetical protein HMPREF9944_02347 [Prevotella maculosa OT 289]
gi|371949152|gb|EHO67022.1| hypothetical protein HMPREF9944_02347 [Prevotella maculosa OT 289]
Length = 644
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 34/326 (10%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
+AW+ E + ++D G E Y D + G K ++E + +D AT + +L +N Q E +
Sbjct: 266 VAWLKEHEGQIDFINGFIEVYGDPL-GLKGSWEGIVEYKDVIATKRTQLISENAQWFEDH 324
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K V V+ GD + NLPN + I + G+ V + N+
Sbjct: 325 SPIDDRFKKKTVRGVTANVVCAAMLGGDEYPSTAIGINLPNADWIRAEYGSKSVTIGNLI 384
Query: 565 EA--KFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGP-HSITLPDGR 617
+ K + +++ I + ++L++ H HEC HG G T PD
Sbjct: 385 DVYNKVSHGSDFMSEFVIDSKTRQLINEYGAICDVLHTDMHECLGHGSGQLLKDTAPDA- 443
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCF--R 672
L+ + +EEA+AD+ GL+ L ++ LLP + KS Y +++ +
Sbjct: 444 -------LKAYGNTIEEARADLFGLYYLADDKMLALGLLPNREAYKSQYYTYMLNGLLTQ 496
Query: 673 SVRFGL----EESHGKGQALQFNWLFEKE------AFILH--SDDTFSVDFDKVEGAVES 720
SVR L EE+H + +AL NW + + + +H D D++++
Sbjct: 497 SVRIELGKNIEEAHMRNRALIANWALDMDTEHQIVSLEIHDGKHDVMVKDYERLRNIFAR 556
Query: 721 LSTEILTIQARGDKEAASLLLQKYCT 746
EI I++ GD E A +L++KY
Sbjct: 557 QLAEIQRIKSEGDYEKARMLVEKYAV 582
>gi|172059009|ref|YP_001815469.1| NUDIX hydrolase [Exiguobacterium sibiricum 255-15]
gi|171991530|gb|ACB62452.1| NUDIX hydrolase [Exiguobacterium sibiricum 255-15]
Length = 172
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T +KTG T PR + GDYH TV+ +F + Q +L+Q R FK+ WP MW
Sbjct: 2 ERWDIYTADREKTGRTWPRGTELKDGDYHLTVHICLFNKQGQ-MLIQHRQPFKEGWPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S G +AGD+S +A+REL EELG++L F Q V F D
Sbjct: 61 DLSVGGSATAGDTSQTAAERELFEELGLSL-----SFAGRRPQLTVP-----FEVGFDDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKY 154
YL+ T + L TLQ+ EV AVK+
Sbjct: 111 YLIET--DVDLATLTLQEEEVQAVKW 134
>gi|281418247|ref|ZP_06249267.1| NUDIX hydrolase [Clostridium thermocellum JW20]
gi|281409649|gb|EFB39907.1| NUDIX hydrolase [Clostridium thermocellum JW20]
Length = 189
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G TG T R + H G HRT + WI E ++LLQ+R+ K+S+P
Sbjct: 2 EILDIVDEHGNPTGKTVERQKAHEEGILHRTSHVWILREKQGKIQVLLQKRSGSKESYPE 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV--FTFLQQNVINDGKFINNE 124
+DISSAGHI AG + SA RELQEELGI+ D F T + + I F + +
Sbjct: 62 CYDISSAGHIPAGMDFVESAIRELQEELGISASADELIFCGNRTVVWDDYICGKPFHDRQ 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
+ V+++ I E F LQ+ EV +V ++ +E
Sbjct: 122 YTRVFIL--WRDIDEEEFILQKEEVDSVLWMDLDE 154
>gi|125974102|ref|YP_001038012.1| NUDIX hydrolase [Clostridium thermocellum ATCC 27405]
gi|125714327|gb|ABN52819.1| NUDIX hydrolase [Clostridium thermocellum ATCC 27405]
Length = 189
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G TG T R + H G HRT + WI E ++LLQ+R+ K+S+P
Sbjct: 2 EILDIVDEHGNPTGKTVERQKAHEEGILHRTSHVWILREKQGKIQVLLQKRSGSKESYPE 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV--FTFLQQNVINDGKFINNE 124
+DISSAGHI AG + SA RELQEELGI+ D F T + + I F + +
Sbjct: 62 CYDISSAGHIPAGMDFVESAIRELQEELGISASADELIFCGNRTVVWDDYICGKPFHDRQ 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
+ V+++ I E F LQ+ EV +V ++ +E
Sbjct: 122 YTRVFIL--WRDIDEEEFILQKEEVDSVLWMDLDE 154
>gi|374385340|ref|ZP_09642847.1| hypothetical protein HMPREF9449_01233 [Odoribacter laneus YIT
12061]
gi|373225831|gb|EHP48159.1| hypothetical protein HMPREF9449_01233 [Odoribacter laneus YIT
12061]
Length = 634
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 161/361 (44%), Gaps = 43/361 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ E +S +D G E Y D + YKA++E+ + I D A + +N E+N
Sbjct: 257 IAWLQEQESPVDFINGFIEVYGDPL-AYKASWESVVEIVDAAACERTNKLAENALWFEKN 315
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+++ +K V RV+Q+ GD + NLPN E I + G+ V L N++
Sbjct: 316 APIEDRFKKTQVSGITARVMQVAMLGGDCHPATPIGINLPNAEWIRERYGSKSVTLDNIT 375
Query: 565 EAKFK-----NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQ 618
A + + A K + EL ++ H HEC HG G +P
Sbjct: 376 YAYHRASQGSGVTAEFAYSEAEKRKAELYGYEGGNLHTDLHECLGHGSGK---MMP---- 428
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFR 672
L+ +S +EEA+AD L+AL ++ LL ++ + Y +++
Sbjct: 429 GVTTEALKNYYSTLEEARAD---LFALYYIADPKLLELGIINGPEVAECEYDTYIRNALL 485
Query: 673 S----VRFG--LEESHGKGQALQFNWLFE--KEAFILHS----DDTFSV--DFDKVEGAV 718
+ ++ G LEE+H + + L +W++E KEA ++ T+ V D++ +
Sbjct: 486 TQLTRIKPGDSLEEAHMRNRQLIASWVYEQGKEANVIEKIREQGKTYFVIRDYEALRMLF 545
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQP--LKVALQKLENVQVPVD---IAPTFTA 773
L E+ I++ GD AA L++ Y + + L++ + VP I P +T
Sbjct: 546 GKLLAEVQRIKSEGDYPAARDLIETYGVKVEEELHREVLERYRKLNVPPYAGFINPVYTL 605
Query: 774 V 774
V
Sbjct: 606 V 606
>gi|363888896|ref|ZP_09316273.1| hypothetical protein HMPREF9628_00917 [Eubacteriaceae bacterium
CM5]
gi|361967273|gb|EHL20106.1| hypothetical protein HMPREF9628_00917 [Eubacteriaceae bacterium
CM5]
Length = 174
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 20/171 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+LD+ T +TG T R G Y V+ IF S ++++Q+R KD W GMW
Sbjct: 2 EYLDLYTRDRVRTGNTILRGTKVPEGFYRLVVHVCIF-NSKGQMIIQQRQTCKDDWGGMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN--NEFA 126
D+S+ G AGDSS +A+RE+ EE+G ++ +D I IN N F
Sbjct: 61 DLSAGGSAKAGDSSQNAAKREVFEEIGYDIEED-------------IRPALTINFKNGFN 107
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVN 177
DVY++ + + + + LQ+ EV AVK+ E K+++A D +F+PY ++
Sbjct: 108 DVYIIKS--DLDISSLKLQEEEVKAVKWATLSEIKSMIA--DGTFIPYHIS 154
>gi|345880245|ref|ZP_08831800.1| hypothetical protein HMPREF9431_00464 [Prevotella oulorum F0390]
gi|343923599|gb|EGV34285.1| hypothetical protein HMPREF9431_00464 [Prevotella oulorum F0390]
Length = 644
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 181/438 (41%), Gaps = 75/438 (17%)
Query: 353 QEDATSFFTVIKRRSEFN-LDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRASE 411
Q++ +++ K+R+ N + L+ ++ V Y E Y +++
Sbjct: 174 QQEVEAYYAAEKKRTGNNRISYGLNTRLIKKDGEIVAQCYRA-----GEYYGDKISQIIH 228
Query: 412 LLHKAGDMASSPSLKRLL------HSKADAFLSNNYYDSDIAWIELDS-ELDVTIGPYET 464
L A D A + ++++ + D + N Y I W++ + ++D G E
Sbjct: 229 WLTLAKDCAENNRQRKVIALLIRYYQTGDLEVFNAY---TIEWLKAQAGDVDFINGFIEV 285
Query: 465 YEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVI 524
Y D + G K ++E + ++ +AT + +L N Q E + P+D+A+K K V +VI
Sbjct: 286 YADPL-GLKGSWEGLVEYKNHEATQRTQLISQNAQWFEDHSPVDDAFKKKTVRGITAQVI 344
Query: 525 QLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK--------------- 569
GD + NLPN + I + G+ + + N+++A K
Sbjct: 345 CAAMLGGDEYPSTAIGINLPNADWIRAEYGSKSITISNITDAYNKASRHSGFMEEFVIDA 404
Query: 570 ---NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLEL 625
++R D C D H HEC HG G T P L
Sbjct: 405 PTLQLIRQYGDCC-----------DDL--HTDLHECLGHGSGQMLPTTPSN-------AL 444
Query: 626 QELHSAMEEAKADIVGLWAL--KFLIGRDLLP-KSLVKSMYVSF-----LAGCFRSVRFG 677
+ + +EEA+AD+ GL+ + + L+ L P + KS Y ++ L C R ++ G
Sbjct: 445 KAYGNTIEEARADLFGLYYIADEKLVELGLTPNQEAYKSQYYTYMQNGLLTQCVR-IKLG 503
Query: 678 --LEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILT 727
+EE H + +AL NW +A + H + F D+ K+ EI
Sbjct: 504 EDIEEDHMRNRALIANWAVALDANHEIVDIVEHGNKHFIAIKDYTKLREIFAFQLKEIQR 563
Query: 728 IQARGDKEAASLLLQKYC 745
I++ GD E A L+++Y
Sbjct: 564 IKSEGDFEQARWLVEQYA 581
>gi|363894630|ref|ZP_09321708.1| hypothetical protein HMPREF9629_02019 [Eubacteriaceae bacterium
ACC19a]
gi|361961860|gb|EHL15028.1| hypothetical protein HMPREF9629_02019 [Eubacteriaceae bacterium
ACC19a]
Length = 174
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 20/171 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+LD+ T +TG T R G Y V+ IF S ++++Q+R KD W GMW
Sbjct: 2 EYLDLYTKDRVRTGNTILRGTKVPEGFYRLVVHVCIF-NSKGQMIIQQRQTCKDDWGGMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN--NEFA 126
D+S+ G AGDSS +A+RE+ EE+G ++ +D I IN N F
Sbjct: 61 DLSAGGSAKAGDSSQNAAKREVFEEIGYDIEED-------------IRPALTINFKNGFN 107
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVN 177
DVY++ + + + + LQ+ EV AVK+ E K+++A D +F+PY ++
Sbjct: 108 DVYIIKS--DLDISSLKLQEEEVKAVKWATLSEIKSMIA--DGTFIPYHIS 154
>gi|300727589|ref|ZP_07060978.1| peptidase family M49 [Prevotella bryantii B14]
gi|299775109|gb|EFI71712.1| peptidase family M49 [Prevotella bryantii B14]
Length = 652
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 162/364 (44%), Gaps = 42/364 (11%)
Query: 439 NNYYDSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDN 497
+++ D IAW+ + + +D G E Y D + G K T+E + D+ ATA+ + +N
Sbjct: 266 HDFDDYSIAWVAQQEGVVDTINGFIEVYGDPL-GLKGTWEGIVEYVDEVATARTRTIANN 324
Query: 498 LQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSM 557
Q E + P+D ++ +V +VI GD + NLPN I G+
Sbjct: 325 AQWFEDHSPVDPRFRKPEVKGVSAQVICAAMLGGDEYPASAIGINLPNANWIRSTYGSKS 384
Query: 558 VMLKNVSEAKFKNILRP--IADVCIRKEQQELVD-----FDSFFTHNICHECC-HGIG-- 607
V + N++EA K + I + +EL++ D H HEC HG G
Sbjct: 385 VTIGNLTEAYTKAAHGNGFTQEFVIDESTRELIEKYGDVCDDL--HTDLHECLGHGSGRL 442
Query: 608 -PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPK-SLVKSMY 663
P T PD L+ + MEEA+AD+ GL+ A L+ L P KS Y
Sbjct: 443 LPG--TDPDA--------LKAYGNTMEEARADLFGLYYIADHKLVELGLTPNDEAYKSQY 492
Query: 664 VSFLAGCFRS--VR----FGLEESHGKGQALQFNWLFEKE---AFILHSDDTFSV---DF 711
++L + VR +EE+H + +AL W+ E+ I+H D V D+
Sbjct: 493 YTYLMNGLITQLVRIKPGLNIEEAHMRNRALIAYWVLEQGNGCVEIVHRDHKTYVKINDY 552
Query: 712 DKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTF 771
++ L E+ I++ GD +AA L++KY P V +++ + ++IAP
Sbjct: 553 KQLRVLFGKLLAEVQRIKSEGDFDAARELVEKYAVKVDP--VLHKEVLDRYAKLNIAPYK 610
Query: 772 TAVN 775
+N
Sbjct: 611 GFIN 614
>gi|325679393|ref|ZP_08158978.1| hydrolase, NUDIX family [Ruminococcus albus 8]
gi|324108990|gb|EGC03221.1| hydrolase, NUDIX family [Ruminococcus albus 8]
Length = 187
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LD++ G TG R H G HRT + W+ + ++LLQ+RA+ K S+P
Sbjct: 2 EFLDIVDENGDPTGEIIDRENAHTKGIRHRTAHLWLLRKCGGKVQILLQKRAENKSSYPA 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF-EFVFTFLQQNVINDGKFINNEF 125
+DISSAGHI AG + SA REL+EELG+ DA E + + ++ +I+D F EF
Sbjct: 62 CYDISSAGHIPAGVDYVPSALRELKEELGV----DALAEELTSCGKRTIISDDVFFGKEF 117
Query: 126 ADVYLVTTL---NPIPLEAFTLQQTEVSAVKYIAYE---------EYKNLLAKDDPSFV- 172
D + I + F LQ+ EV +V+++ +E +K+ +A ++ +
Sbjct: 118 HDRQVSKVFVMWRDIDEKDFILQKEEVDSVRWVDFEYCIEAVKTNSFKHCIALEELMMIQ 177
Query: 173 PYDVNGGYGQ 182
Y +GG GQ
Sbjct: 178 KYLQSGGDGQ 187
>gi|374600029|ref|ZP_09673031.1| peptidase family M49 [Myroides odoratus DSM 2801]
gi|423325192|ref|ZP_17303033.1| hypothetical protein HMPREF9716_02390 [Myroides odoratimimus CIP
103059]
gi|373911499|gb|EHQ43348.1| peptidase family M49 [Myroides odoratus DSM 2801]
gi|404607201|gb|EKB06735.1| hypothetical protein HMPREF9716_02390 [Myroides odoratimimus CIP
103059]
Length = 677
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 137/332 (41%), Gaps = 42/332 (12%)
Query: 443 DSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW+ D +D G E Y D + G+KA++E+ + I+D + ++++ Q
Sbjct: 287 DYNVAWVGATDGNIDYNNGFIEVYNDPL-GHKASYESVVQIKDFDMSKKMEVLSKEAQWF 345
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V + + + SGD + NLPN + I + G+ + L
Sbjct: 346 EDNSPLMPEHKKKNVTGVTYKTVIVASESGDSSPSTPIGVNLPNADWIRAEHGSKSISLG 405
Query: 562 NV--------SEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ K K +V + ++ EL D H + I P I
Sbjct: 406 NIIDSYNHAGGSGKLKEFAHDEEEVKLEEQYGELADKLHTALHEVIGHASGQINP-GIGQ 464
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
P + L+ S +EE +AD+VGL+ +L L LV +A
Sbjct: 465 P-------KETLKSYASTLEEGRADLVGLF---YLYNPKLQEIGLVDDWKAVGMAAYDGY 514
Query: 674 VRFGL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFD 712
+R GL EE+H + + W+FEK E + F++ D+D
Sbjct: 515 IRNGLMTQLVRLEPGADIEEAHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYFNITDYD 574
Query: 713 KVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
K+ L E I++ GD AA L++ Y
Sbjct: 575 KLHALFGELLKETQRIKSEGDYNAAKQLVENY 606
>gi|150016604|ref|YP_001308858.1| NUDIX hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|149903069|gb|ABR33902.1| NUDIX hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 168
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG+ K RSE G+Y+ WI S++ +L+Q+R+ KD P MW
Sbjct: 2 ELRDIYNSKGYKTGVRKERSEKLEDGEYYLATEVWIINSSSK-ILIQQRSSNKDVLPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G + +G+ + A RE++EE+G+++ KD F+ ++N I D+
Sbjct: 61 GLTT-GCMVSGEGTAEGALREVKEEIGLSIEKDELNFIRRIFRENSI----------WDI 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
Y V + L LQ+ EVS VK+++ EE+ N+L
Sbjct: 110 YFV--YKDVELSKLILQKEEVSNVKFVSIEEFNNML 143
>gi|189502545|ref|YP_001958262.1| hypothetical protein Aasi_1205 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497986|gb|ACE06533.1| hypothetical protein Aasi_1205 [Candidatus Amoebophilus asiaticus
5a2]
Length = 182
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 11 LDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDI 70
LDV+ G TG R EVH +G HR V+ ++ E LL+Q+RA D +P W I
Sbjct: 9 LDVIDEYGNFTGQRASREEVHTLGLIHRAVHLYLVDEEDH-LLMQKRAKTVDHYPNEWSI 67
Query: 71 SSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
S GH+ A +SS + RE++EEL + F+F+F++ Q ++ +I+ +F DVY
Sbjct: 68 SLTGHVDARESSSEALYREVREELRLEPTTMKFDFLFSYRQDYTLHKS-YIDRQFNDVYF 126
Query: 131 VTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
+P LE EV+ ++ I ++++K+++
Sbjct: 127 CQ--HPFRLENIHFDTNEVARLERIPFKQFKDMV 158
>gi|407478628|ref|YP_006792505.1| NUDIX hydrolase [Exiguobacterium antarcticum B7]
gi|407062707|gb|AFS71897.1| NUDIX hydrolase [Exiguobacterium antarcticum B7]
Length = 172
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T QKTG T PR + + GDYH V+ +F + Q +L+Q+R FK WP MW
Sbjct: 2 EQWDIYTADRQKTGRTWPRGKELQDGDYHLVVHVCLFNQQGQ-MLIQQRQPFKSGWPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S G + GD+S +A+REL EELG++L +F + F F D
Sbjct: 61 DLSVGGSATTGDTSQTAAERELFEELGLSL---------SFAGRRPHMTIPF-EVGFDDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
YL+ T + L TLQ+ EV AVK+ +E + + +F+ Y
Sbjct: 111 YLIET--DVDLTTLTLQEEEVQAVKWATEDEI--IAGIKEGTFISY 152
>gi|386724054|ref|YP_006190380.1| hydrolase [Paenibacillus mucilaginosus K02]
gi|384091179|gb|AFH62615.1| hydrolase [Paenibacillus mucilaginosus K02]
Length = 217
Score = 89.4 bits (220), Expect = 7e-15, Method: Composition-based stats.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 13/164 (7%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQE--LLLQRRADFK 61
VQEE D+ Q G T R EVH G +HRT WI+ AE E +L Q R K
Sbjct: 3 VQEEQFDIYDKVMQPIG-TASREEVHAKGWWHRTFQCWIWDAAEPAGEGSILFQERHPGK 61
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFI 121
D++PG+ DIS AGH+ AG+ S+ RELQEELG+ + D F +++ + G+ +
Sbjct: 62 DTFPGLLDISCAGHLLAGE-SVEDGVRELQEELGVEVSFDRLISCGIFAEEDELPGGR-M 119
Query: 122 NNEFADVYLVTTLNPI--PLEAFTLQQTEVSAVKYIAYEEYKNL 163
+ EF V+++ P+ PLE++ LQ+ EV+ + + ++ L
Sbjct: 120 DREFCHVFVL----PLSRPLESYRLQEDEVTGLYRMPLPVFRRL 159
>gi|337747555|ref|YP_004641717.1| hydrolase [Paenibacillus mucilaginosus KNP414]
gi|336298744|gb|AEI41847.1| hydrolase [Paenibacillus mucilaginosus KNP414]
Length = 217
Score = 89.4 bits (220), Expect = 7e-15, Method: Composition-based stats.
Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 13/165 (7%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQE--LLLQRRADFK 61
VQEE D+ Q G T R EVH G +HRT WI+ AE E +L Q R K
Sbjct: 3 VQEEQFDIYDKDMQPIG-TASREEVHAKGWWHRTFQCWIWDAAEPAGEGSILFQERHPGK 61
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFI 121
D++PG+ DIS AGH+ AG+ S+ RELQEELG+ +P D F +++ + G+ +
Sbjct: 62 DTFPGLLDISCAGHLLAGE-SVEDGVRELQEELGVEVPFDRLISCGIFAEEDELPGGR-M 119
Query: 122 NNEFADVYLVTTLNPIP--LEAFTLQQTEVSAVKYIAYEEYKNLL 164
+ EF V+++ P+ LE++ LQ+ EV+ + + ++ L+
Sbjct: 120 DREFCHVFVL----PLSRRLESYRLQEDEVTGLYRMPLPVFRRLV 160
>gi|399051741|ref|ZP_10741514.1| isopentenyldiphosphate isomerase [Brevibacillus sp. CF112]
gi|398050472|gb|EJL42838.1| isopentenyldiphosphate isomerase [Brevibacillus sp. CF112]
Length = 207
Score = 89.4 bits (220), Expect = 7e-15, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDS 63
++EE LD+L G G+ + RS+VHR+G +H+T + WI+ ELL Q+R KD+
Sbjct: 1 MKEELLDILDGAGNHIGV-EARSDVHRLGYWHQTFHCWIYRIHAGQVELLFQKRHPQKDT 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
P + DI+SAGH+ A + S RELQEELG+ +P + + +V+ I+
Sbjct: 60 CPDLLDITSAGHLLAAEQS-CDGVRELQEELGLAVPFEQLREIGVI--SDVMTSPGIIDK 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP 169
E V+ + PL + LQ EV+ + ++ E + L A P
Sbjct: 117 ELCHVFAIACDQ--PLHEYRLQADEVTGLFWVKLHELEQLFAGQLP 160
>gi|298712267|emb|CBJ26718.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 175
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF- 109
EL+LQ+R+ KD++PGMWD+S GH +AG+ SL +A +E EELG++ + + FV T
Sbjct: 35 ELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETDEELGLSCDESSLRFVCTVA 94
Query: 110 --LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
+ + G F+ NE+ D+YL+ P+ + +EV VK + + K
Sbjct: 95 TTAKGSTDMHGDFVCNEYKDIYLLRHDGPV--QDLKFSPSEVEDVKLVPMQALKEAYEAQ 152
Query: 168 DPSFVP 173
DP+++P
Sbjct: 153 DPTYIP 158
>gi|347547789|ref|YP_004854117.1| putative different protein [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346980860|emb|CBW84774.1| Putative different protein [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 169
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 21/169 (12%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ Q G T R E ++G+ H V+ IF E Q LL+Q+R K+SWPG W
Sbjct: 2 EKWDLYDNQRQLIGKTHIRGEKMQLGELHLVVHVCIFNEENQ-LLIQKRQKEKESWPGYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGI--NLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE+QEELGI +L + +F F F + F
Sbjct: 61 DLSAAGSALKGETSQQAAEREVQEELGIKLDLSNERAKFSFHF------------DYGFD 108
Query: 127 DVYLVT-TLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + P L LQQ EV+ +++ EE KNL A + +PY
Sbjct: 109 DYWFITKNIQPSDL---ILQQEEVADARFVTKEELKNLSATGE--MIPY 152
>gi|327405570|ref|YP_004346408.1| Dipeptidyl-peptidase III [Fluviicola taffensis DSM 16823]
gi|327321078|gb|AEA45570.1| Dipeptidyl-peptidase III [Fluviicola taffensis DSM 16823]
Length = 672
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 45/351 (12%)
Query: 444 SDIAWIELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
DI WI G E Y DA+ G +A +E+ + I D +A+ ++ + N Q E
Sbjct: 297 GDIDWIN---------GFIEVYGDAL-GKRANYESMVQINDFEASKRMSVVAKNAQWFED 346
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV 563
N P+ +K K V+ +V+++ SG+ + NLPN+ I G+ V L N+
Sbjct: 347 NSPLMPEHKKKKVVGVSYKVVEVANESGESAPSTPIGVNLPNNNWIRDVHGSKSVSLGNI 406
Query: 564 SEAKFKNILRPIADVCIRKEQQELVDFDSFFT-----HNICHECCHGIGPHSITLPDGRQ 618
+A + P +Q+E+ + + + H HE G + G+
Sbjct: 407 IDA-YNKAGGPEVVEEFANDQEEINRANKYGSLAGKMHTALHEVL-GHASGQLNKGVGQP 464
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYV----------SFLA 668
S L+ S +EEA+AD+VGL+ +++ + ++ L++S+ V + L
Sbjct: 465 SET---LENYASTLEEARADLVGLY---YIMDQKMVDLGLIESLEVGKAEYDGYIRNGLL 518
Query: 669 GCFRSVRFG--LEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAV 718
+ + G LEE H + + L W+FEK E + + + + D+ K+
Sbjct: 519 TQLQRLEMGQNLEEEHMQNRQLVSAWVFEKGLKDKVIEKIVRNGKTYYDIKDYKKLRVLF 578
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAP 769
L EI I++ GD +A L++ Y K+ + L+ V+ P++IAP
Sbjct: 579 GELLREIQRIKSEGDYKAGKNLVETYGVKVDS-KIHAEVLKRVK-PLNIAP 627
>gi|145353048|ref|XP_001420842.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581077|gb|ABO99135.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 216
Score = 89.0 bits (219), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA-- 78
TG K R++VH GD+HR+ + W+ T+ +++Q+R+ KD++PG WD+ +AGH+ A
Sbjct: 22 TGAVKRRADVHADGDWHRSAHVWLVDARTRSVVVQKRSAMKDTFPGAWDVGAAGHVGAED 81
Query: 79 GDSSLISAQRELQEELGINLPK-DAFEFVFTFLQQNVINDGKFINNEFADVYLV----TT 133
G SS +A+ EL EELG+ L + DA F FT G N F DVY
Sbjct: 82 GGSSRRTARHELAEELGVELEREDALVFQFTVPAAQASFGG---CNCFEDVYFARWTRRD 138
Query: 134 LNPIPLEAFTLQQTEVSAVKYIAYE 158
+ F + EV+A K+I ++
Sbjct: 139 EGEDDEDEFAIGLAEVTATKWIEFD 163
>gi|163756214|ref|ZP_02163329.1| hypothetical protein KAOT1_06742 [Kordia algicida OT-1]
gi|161323826|gb|EDP95160.1| hypothetical protein KAOT1_06742 [Kordia algicida OT-1]
Length = 182
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 8/176 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E +D+L G+ TG P+ EVHR G +H + + W++ + T +++LQ RA K ++P W
Sbjct: 2 ELIDILDEQGKPTGEILPKREVHRYGHFHASTHLWLYTK-TGKVVLQLRAAIKPNFPNCW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S AGHIS+G+ +L +A RE QEELGI + + + F + + + + + EF +
Sbjct: 61 DVSVAGHISSGEDALQTAVREAQEELGITVQSEKLLQIGHF-RIDYQHAEDYHDREFITI 119
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD--PSFVPYDVNGGYGQ 182
+ + PL+ TLQ+ EV+ V + + + LA + +VP+ N Y +
Sbjct: 120 FACEIPDE-PLQV-TLQEEEVADVTLLPLAQIEAELADTELAKKYVPF--NKAYAK 171
>gi|397598936|gb|EJK57316.1| hypothetical protein THAOC_22652 [Thalassiosira oceanica]
Length = 638
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 21/173 (12%)
Query: 25 KPRSEVHRVGDYHRTVNAWIF-------AESTQELLLQRRADFKDSWPGMWDISSAGHIS 77
K R VHR GD+HR+V+ W+ +++ ++LLQRR+ +KD+ P + D+S AGH+
Sbjct: 87 KERGLVHRDGDWHRSVHVWLAQTTNGDRGKTSCKVLLQRRSPYKDTHPNLLDVSCAGHVD 146
Query: 78 AGDSSLISAQRELQEELGIN-LPKDAFE----------FVFTFLQQNVINDGKFINNEFA 126
AG ++ +A RELQEELG N + +D +E V + +Q G+F+ E+
Sbjct: 147 AGSDTVETATRELQEELGGNGIMQDRYEAEDVRRSKVCTVTSSIQGQTEKFGRFLCREYQ 206
Query: 127 DVYLV--TTLNPIPLEAFTLQ-QTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
DV+L+ + F+ Q + EVS + +A EE L D VP +
Sbjct: 207 DVFLLWWPSDEAFAPGLFSPQTEEEVSGFELMAAEELVAKLRSGDKDLVPRSI 259
>gi|332882054|ref|ZP_08449689.1| peptidase family M49 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357048212|ref|ZP_09109766.1| peptidase family M49 [Paraprevotella clara YIT 11840]
gi|332679978|gb|EGJ52940.1| peptidase family M49 [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355528795|gb|EHG98273.1| peptidase family M49 [Paraprevotella clara YIT 11840]
Length = 658
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 41/379 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y + + R L KA +A + +L + + + + D I W+ E ++ +D
Sbjct: 225 YGAAIDRIIYWLEKATGVAENGKQAEVLRKLIEFYRTGDLKTFDEYTILWVQETEAMVDF 284
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
T G ETY D + G KA++E + +D +ATA+ + N Q E + P+D+ +K +
Sbjct: 285 TNGFTETYGDPL-GLKASWEGYANFKDLEATARTEKLSANAQWFEDHSPVDDRFKKAECR 343
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP--I 575
+VI+ GD+ + NLPN + + G+ V + N+++A K +
Sbjct: 344 GVSAKVIKAAILGGDLYPASAIGINLPNSNWVRAEYGSKSVTIGNLTDAYNKAAHGNGFL 403
Query: 576 ADVCIRKEQQELVD-----FDSFFTHNICHECC-HGIGPHSITL-PDGRQSTVRLELQEL 628
+ I E L+D D H HEC HG G + PD L+
Sbjct: 404 QEFVIDDETLRLLDRYQDTCDDL--HTDLHECLGHGSGKLLPGVDPDA--------LKAY 453
Query: 629 HSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCF--RSVRF----GLE 679
+ +EEA+AD+ GL+ L L+ L P + K+ Y ++ + VR +E
Sbjct: 454 GATIEEARADLFGLYYLADAKLVELGLTPDAEAYKAQYYGYMMNGLLTQMVRIEPGRDIE 513
Query: 680 ESHGKGQALQFNWLF-----EKEAFILHSDDTFSV---DFDKVEGAVESLSTEILTIQAR 731
E+H + +AL W + E ++ D V D++++ L EI I++
Sbjct: 514 EAHMRNRALIARWAYGHGREEGVTELVKRDGKTYVRIRDYERLRELFGLLLREIQRIKSE 573
Query: 732 GDKEAASLLLQKYCTMTQP 750
GD EAA L+++Y T P
Sbjct: 574 GDYEAARDLVERYGVKTDP 592
>gi|290995837|ref|XP_002680489.1| predicted protein [Naegleria gruberi]
gi|284094110|gb|EFC47745.1| predicted protein [Naegleria gruberi]
Length = 88
Score = 88.2 bits (217), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 60/88 (68%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E ++V T G+ TG +PRS++H G +H TV+ W+ ST +LL+QRR+ K + P W
Sbjct: 1 ELIEVFTSAGEPTGRGEPRSKIHSEGIWHNTVHTWVLETSTGKLLVQRRSPNKLNHPNQW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGI 96
D SSAGHIS G SS ++ RE++EELGI
Sbjct: 61 DTSSAGHISFGQSSDEASVREIEEELGI 88
>gi|357060252|ref|ZP_09121025.1| hypothetical protein HMPREF9332_00582 [Alloprevotella rava F0323]
gi|355376524|gb|EHG23768.1| hypothetical protein HMPREF9332_00582 [Alloprevotella rava F0323]
Length = 663
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 166/377 (44%), Gaps = 37/377 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY--YDS-DIAWIELDSE--LD 456
Y S +TR + L KA + + ++ + + + + YD+ I W++ D+E +D
Sbjct: 230 YGSAITRIIDCLQKARPFCDTEKQQHVIDKLIEFYRTGDLRTYDAWSILWLK-DTEDLVD 288
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
T ETY D + G KA++EA + +D +AT + + N Q E + P+D +K + V
Sbjct: 289 FTNNFTETYGDPL-GMKASWEAIVNFKDIEATRRTETLSANAQWFEDHSPVDARFKKEKV 347
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIA 576
+VI GD+ + NLPN + + K+ G+ V + N+++A K
Sbjct: 348 KGVSAKVITAAILGGDLYPSTAIGINLPNSDWVRKEHGSKSVTIGNLTDAYSKAAHGSGM 407
Query: 577 D--VCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQELHS 630
D I ++L++ T H HEC HG G LP T L+ S
Sbjct: 408 DKEFVIDDATRQLINRYGDITDDLHTDLHECLGHGSGK---LLP----GTDPDSLKAYGS 460
Query: 631 AMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEES 681
+EE +AD+ GL+ A + L P + K+ Y +++ + VR +EE+
Sbjct: 461 TIEEGRADLFGLYYVADPKMTELGLTPDAEAYKAQYYTYMQNGLLTQLVRIKPGNNIEEA 520
Query: 682 HGKGQALQFNWLFEKE------AFILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGD 733
H + +A +W +E+ + T+ D+ + L E+ I++ GD
Sbjct: 521 HMRNRAFIAHWAYEQGRDKKVVELVKRGGKTYVRINDYPALRQLFARLLAEVQRIKSEGD 580
Query: 734 KEAASLLLQKYCTMTQP 750
EAA L++ Y P
Sbjct: 581 YEAARQLVETYGVKVDP 597
>gi|336399620|ref|ZP_08580420.1| Dipeptidyl-peptidase III [Prevotella multisaccharivorax DSM 17128]
gi|336069356|gb|EGN57990.1| Dipeptidyl-peptidase III [Prevotella multisaccharivorax DSM 17128]
Length = 650
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 37/370 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLL------HSKADAFLSNNYYDSDIAWI-ELDSE 454
Y + L R L KA ++A + L+ ++ D L + Y I W+ E +
Sbjct: 224 YGAALQRIVYWLKKAKEVAENEKQTELIDLLIRYYATGDLRLFDEY---SIEWLKEQGGD 280
Query: 455 LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSK 514
+D G E Y D + G K T+E + ++D+KAT + + DN Q E + P+D ++
Sbjct: 281 VDFINGFIEVYGDPL-GLKGTWEGLVELKDEKATQRTRTIADNAQWFEDHSPVDPRFRKP 339
Query: 515 DVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP 574
V V+Q + G+ + NLPN + I G+ + + N+++A K
Sbjct: 340 VVKGVSAHVVQAVMLGGEEYPSSAIGINLPNADWIRARYGSKSITIGNLTDAYNKAARGN 399
Query: 575 IAD--VCIRKEQQELVDFDSFFT---HNICHECCHGIGPHSITLPDGRQSTVRLELQELH 629
D I KE + +++ H HEC +G S L G S L+
Sbjct: 400 GFDEEFVIDKETRAIIEKYGDLCDDLHTDLHEC---LGHGSGQLLPGVSSDA---LKAYG 453
Query: 630 SAMEEAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRFG----LEE 680
S +EEA+AD+ GL+ L L+ L+P K KS Y ++ + VR +EE
Sbjct: 454 STIEEARADLFGLYYLADDKLVELGLVPDKEAYKSQYYHYMMNGLLTQLVRIKPGDQIEE 513
Query: 681 SHGKGQALQFNWLFEK-----EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDK 734
+H + +A+ +W + E +++ V D+ + L EI I++ GD
Sbjct: 514 AHMRNRAIIAHWCLDHADGCVELTVINGKTYVRVNDYPSLRKLFGKLLAEIQRIKSEGDY 573
Query: 735 EAASLLLQKY 744
E A +++ Y
Sbjct: 574 ETARAMVETY 583
>gi|282879867|ref|ZP_06288594.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
gi|281306261|gb|EFA98294.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
Length = 644
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 145/338 (42%), Gaps = 54/338 (15%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E D ++D G E Y D + G K ++E F+ +D++AT + KL + Q E +
Sbjct: 257 IEWLKEQDGQVDFINGFIEVYGDPL-GLKGSWEGFVSYKDEEATQRTKLISQHAQWFENH 315
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D +K ++V V+ GD + NLPN E I G+ V + N++
Sbjct: 316 SPVDQRFKKQEVRGVTAHVVCAAMLGGDEYPASAIGINLPNAEWIRTRYGSKSVTIGNLT 375
Query: 565 EAKFKNILRP--------IADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPD 615
EA + + R + D +R Q L H HEC HG G LP
Sbjct: 376 EA-YNEVARGNGLHEEFVVDDEVLR--QINLYGNLCDNLHTDLHECVGHGSGQ---LLPG 429
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKSLV-KSMYVSFLAGCFR 672
+R +EEA+AD+ L+ + + L+ LLP + ++ Y ++L
Sbjct: 430 VSGDALR----AYGDTIEEARADLFALYYMADEKLVELGLLPDTTAYQAQYYTYLMNGLM 485
Query: 673 S----VRFG--LEESHGKGQALQFNWLFEKEAFILHSDDTFSV----------------- 709
+ ++ G +EE+H + +AL +W+ + H+ D +
Sbjct: 486 TQLVRIQLGHKIEEAHMRNRALIAHWV------LAHAGDAVEIVERSVAGTNEVKHYVQV 539
Query: 710 -DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCT 746
D+ K+ L EI I++ GD EAA L++ Y
Sbjct: 540 NDYSKLRNLFGELLAEIQRIKSEGDFEAARNLVETYAV 577
>gi|344201356|ref|YP_004786499.1| NUDIX hydrolase [Muricauda ruestringensis DSM 13258]
gi|343953278|gb|AEM69077.1| NUDIX hydrolase [Muricauda ruestringensis DSM 13258]
Length = 182
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G+ TG + +SE HR G H TV+ W++ + +L+Q+R K + P
Sbjct: 2 DEQVDILDEHGKPTGESCLKSEAHRKGLLHPTVHIWLYTPEGR-VLIQQRGKNKATHPLN 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGH+++G+ + +A RE++EE+GI + + E + TF + I++ FI+ E
Sbjct: 61 WDVSVAGHVASGEKIISAAIREVEEEIGIQVSETELESLGTFKAVHKISE-DFIDAELHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEV 149
++L LN +PL T Q++EV
Sbjct: 120 IFLC-KLN-VPLSQLTKQESEV 139
>gi|260885263|ref|ZP_05734660.2| peptidase, M49 family [Prevotella tannerae ATCC 51259]
gi|260853016|gb|EEX72885.1| peptidase, M49 family [Prevotella tannerae ATCC 51259]
Length = 716
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 174/408 (42%), Gaps = 46/408 (11%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIELDSEL-DV 457
Y S +T+ L +A +P+ + ++ + + + + D W+ +L D
Sbjct: 284 YGSAITKIIYNLQQARPYCDTPAQQAVIDKLIEFYRTGDLRTFDEYSTLWVHATEDLVDF 343
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G ETY D + G KA++EA + ++ AT + + N Q E + P+D +K + V
Sbjct: 344 VNGFTETYGDPL-GLKASWEAIVNFKNIAATKRTEKLSKNAQWFEDHSPVDPRFKKEKVK 402
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILR 573
+VI GD+ + NLPN + + K+ G+ V + N+++A K N +
Sbjct: 403 GITAKVITAAILGGDLYPSTAIGINLPNSDWVRKEVGSKSVTIGNLTDAYNKAAHGNGFQ 462
Query: 574 PIADVCIRKEQQELV----DFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQEL 628
A+ I K Q+L+ D D H HEC HG G L DG L+
Sbjct: 463 --AEFVIDKATQDLINKYGDNDEDL-HTDLHECLGHGSG----KLLDGTNPD---SLKVY 512
Query: 629 HSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLE 679
S +EEA+AD+ GL+ L L+ L P + K+ Y +++ + VR LE
Sbjct: 513 ASPIEEARADLFGLYYLADAKLVELGLTPDADAYKAQYYTYMMNGLMTQLVRIQPGNNLE 572
Query: 680 ESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTIQAR 731
E+H + +AL +W +EK + T+ D+ + L EI +++
Sbjct: 573 EAHMRNRALIAHWAYEKGKANKVVELVKKGGKTYVKINDYPALRELFGKLLAEIQRVKSE 632
Query: 732 GDKEAASLLLQKYCTMTQP-----LKVALQKLENVQVPVDIAPTFTAV 774
GD A L++ Y P + KL I P +TAV
Sbjct: 633 GDFAGARRLVEDYGVKVDPQLHKEILARYAKLNIAPYKGFINPVYTAV 680
>gi|402846694|ref|ZP_10895003.1| peptidase family M49 domain protein [Porphyromonas sp. oral taxon
279 str. F0450]
gi|402267386|gb|EJU16781.1| peptidase family M49 domain protein [Porphyromonas sp. oral taxon
279 str. F0450]
Length = 910
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 198/480 (41%), Gaps = 59/480 (12%)
Query: 329 ANFYPPDMDKMEFELWKSS----LTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
ANFY PD+ + E E + + LTE+++++ S L+S L+ D
Sbjct: 173 ANFYAPDVTQAEAEAFYRAAYDYLTEEERQEPPSL----------GLNSRLA-KTEDG-- 219
Query: 385 HSVGSIYDLYSVPYSEE--YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN-- 440
LY Y ++ Y L++ L A A S + ++ + S + +
Sbjct: 220 -------QLYEEVYKQDGLYGEALSQIIAHLKAAVAYAESEAQRKTILSLIEYYKKGELE 272
Query: 441 -YYDSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNL 498
Y I W+ + + +D G E Y D + G K +E+ + IRD+KA+ +
Sbjct: 273 EYNRYSIHWVGDTEPVVDFINGFTEVYTDPL-GMKGMWESLVHIRDEKASERTVKICSEA 331
Query: 499 QVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMV 558
E + P+D +K ++ V+ + +GD + NLPN + I G+ V
Sbjct: 332 AWFEAHAPIDARFKKENPRGVSATVVSVAMLAGDSYPATPIGINLPNADWIRATYGSKSV 391
Query: 559 MLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSF-----FTHNICHECC-HGIGPHSIT 612
+ N+ EA D + + + H HEC HG G
Sbjct: 392 TIDNIHEAYRLAARHSGMDAAFVPDPATRALLEKYEGVTEHLHTDLHECLGHGSG----K 447
Query: 613 LPDGRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAG 669
L DG L HS +EEA+AD+ L+ + ++L+ LLP + K+ Y +L
Sbjct: 448 LLDGVSPDA---LGAYHSTLEEARADLFALYYMADEYLVELGLLPDTEAYKACYYRYLLN 504
Query: 670 CFRS----VRFG--LEESHGKGQALQFNWLFEKE----AFILHSDDTFSVDFDKVEGAVE 719
+ +R G LEE+H + +AL ++ E+ A L + D+ + +
Sbjct: 505 GLVTQLVRIRPGHVLEEAHMRNRALIARYVLERATASGAAELRGLELIVHDYAALRPIIA 564
Query: 720 SLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
L E+ I++ GD+ A L+++Y P K+ + L ++IAP VN L+
Sbjct: 565 ELLAEVQRIKSEGDQPAGRALVERYAIDVDP-KLHAEVLRRYAT-LNIAPYKGFVNPRLE 622
>gi|198276248|ref|ZP_03208779.1| hypothetical protein BACPLE_02440 [Bacteroides plebeius DSM 17135]
gi|198270690|gb|EDY94960.1| peptidase family M49 [Bacteroides plebeius DSM 17135]
Length = 655
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 154/328 (46%), Gaps = 38/328 (11%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ + +S++D G E+Y D + G KA++E+ + +D++AT + ++ + Q E +
Sbjct: 272 IAWLKDTESKVDFVNGFIESYGDPL-GMKASWESIVNFKDEEATHRTEVISQHAQWFEDH 330
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+ A+K V +VI GD+ + NLPN I G+ V + N++
Sbjct: 331 SPVSLAFKKGVVRGVSAKVITAAMLGGDLYPSSAIGINLPNSNWIRSLHGSKSVTIGNLT 390
Query: 565 EAKFK----NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITL-PD 615
+A K N R + +E+++L++ + T H HEC HG G + PD
Sbjct: 391 DAYNKAAKGNGFRE--EFVYSQEEKDLLEKYADITGDLHTDLHECVGHGSGKLLPGVDPD 448
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLP-KSLVKSMYVSFLAGCF- 671
L+ S +EEA+AD+ GL+ L + L+ L P + K+ Y +++
Sbjct: 449 A--------LKAYGSTIEEARADLFGLYYLPDEKLVELGLTPDEEAYKAEYYAYMMNGLL 500
Query: 672 -RSVRF----GLEESHGKGQALQFNWLFEKEAF-----ILHSDDTFSV---DFDKVEGAV 718
+ VR LEE+H + + L W E ++ D V D+ ++ G
Sbjct: 501 TQMVRIEPGCDLEEAHMRNRQLIARWALENGKSMNIVELVKKDGKTYVKINDYLQLRGLF 560
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCT 746
L +EI I++ GD EAA L++KY
Sbjct: 561 AVLLSEIQRIKSEGDYEAARALVEKYAV 588
>gi|374596970|ref|ZP_09669974.1| peptidase M49 [Gillisia limnaea DSM 15749]
gi|373871609|gb|EHQ03607.1| peptidase M49 [Gillisia limnaea DSM 15749]
Length = 683
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 139/324 (42%), Gaps = 26/324 (8%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW+E + +D E Y D + GY+ ++E + I+D + + ++ + DN+Q
Sbjct: 287 DYNVAWVEATEGNIDYINSFIEVYNDPL-GYRGSYENIVQIKDFEMSEKMSVLEDNVQWF 345
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K V+ + + + +GD + NLPN I + G+ V L
Sbjct: 346 EDNAPLMEEHKKDSVVGVTYKTVIVAGEAGDASPSTPIGVNLPNSNWIRQAHGSKSVSLG 405
Query: 562 NVSEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTV 621
N+ EA + + E++ +++ + + H H + H+ +
Sbjct: 406 NIIEAYNNAGSSGVLEEFAHDEEEIMLEKEYGKEGDKLHTALHEVVGHASGKINPGVGET 465
Query: 622 RLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL--- 678
+ L+ S +EE +AD+VGL+ +L+ + L + +A +R GL
Sbjct: 466 KETLKSYASTLEEGRADLVGLY---YLMDPKIQELGLTNDWKKTGIAAYDGYIRNGLMTQ 522
Query: 679 ----------EESHGKGQALQFNWLFEK---EAFI--LHSDDTFSVD---FDKVEGAVES 720
EESH + + W+FEK E I + D D +D++
Sbjct: 523 LRRLELGDNVEESHMRNRQWVSAWVFEKGKEEGVIEKVSRDGKTYYDIKNYDRLRELFGE 582
Query: 721 LSTEILTIQARGDKEAASLLLQKY 744
L E I++ GD EAA L++ Y
Sbjct: 583 LLKETQRIKSEGDYEAAQNLVENY 606
>gi|399926707|ref|ZP_10784065.1| Peptidase family M49 [Myroides injenensis M09-0166]
Length = 678
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 42/332 (12%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW+E + +D G E Y D + G+K +FE+ + I+D + ++++ Q
Sbjct: 288 DYNVAWVEATEGNIDYNNGFIEVYNDPL-GHKGSFESVVQIKDFDMSKKMEVLSKEAQWF 346
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V + + + +GD + NLPN + I + G+ + L
Sbjct: 347 EDNSPLMEEHKKKNVTGVTYKTVIVASEAGDASPSTPIGVNLPNADWIRAEHGSKSISLG 406
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ ++ + K + + + ++ EL D H H + H+
Sbjct: 407 NIIDSYNHASGSDRLKEFVHDEEEFQLEEKYGELAD--------KLHTALHEVIGHASGQ 458
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
+ ++ L+ S +EE +AD+VGL+ +L L LV A
Sbjct: 459 INKGVGQPQVTLKSYASTLEEGRADLVGLF---YLYNPKLQELGLVDDWKAVGKAAYDGY 515
Query: 674 VRFGL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFD 712
+R GL EE+H + + W+FEK E + F++ D+D
Sbjct: 516 IRNGLMMQLVRLEPGTDIEEAHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYFNITDYD 575
Query: 713 KVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
K+ L E I++ GD EAA L++ Y
Sbjct: 576 KLHDLFGQLLKETQRIKSEGDFEAAKALVETY 607
>gi|390455874|ref|ZP_10241402.1| Nudix hydrolase [Paenibacillus peoriae KCTC 3763]
Length = 210
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAEST--QELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
T R E H G +H T + W+ +++ + LL Q+R D KD++PG +DI++AGH++AG+
Sbjct: 18 TASRQEAHAKGYWHHTFHCWLARDTSTGRRLLFQQRQDSKDTFPGYYDITAAGHLTAGE- 76
Query: 82 SLISAQRELQEELGINLPKDAFEFVFT--FLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
+ A REL+EELGI++P + + T + + F + EF+ V+ + L PL
Sbjct: 77 DVSQAARELEEELGIHVPFTSLTPLMTVRYESKGTAQGTSFWDREFSSVFGL--LWNQPL 134
Query: 140 EAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGG 179
EA+ LQQ EV+ + E+ L P + + G
Sbjct: 135 EAYRLQQEEVAGLYEADLEQALALFEGHIPFLEAHGITSG 174
>gi|224026749|ref|ZP_03645115.1| hypothetical protein BACCOPRO_03506, partial [Bacteroides
coprophilus DSM 18228]
gi|224019985|gb|EEF77983.1| hypothetical protein BACCOPRO_03506 [Bacteroides coprophilus DSM
18228]
Length = 485
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 166/382 (43%), Gaps = 47/382 (12%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y L + L KA ++A + + ++ + + + + D I W+ + DS++D
Sbjct: 54 YGEALQKIVSWLDKAAEVAENDRQREVIRLLTEFYRTGDLKTFDAYSIVWLKDTDSQVDF 113
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + +D +AT + +L +N Q E + P+ ++ + V
Sbjct: 114 VNGFIESYGDPL-GIKASWESIVNFKDLEATRRTELISENAQWFEDHSPVAPQFRKEKVK 172
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA--------KFK 569
+VI GD+ + NLPN I G+ V + N++ A F+
Sbjct: 173 GVSAKVITAAMLGGDLYPSTAIGINLPNSNWIRSVHGSKSVTIGNLTSAYNQAARGNGFR 232
Query: 570 N--ILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITL-PDGRQSTVRLEL 625
+ + P+ + K D H HEC HG G + PD L
Sbjct: 233 DEFVYSPVEIGLLDKYADITGDL-----HTDLHECLGHGSGRLLPGVDPDA--------L 279
Query: 626 QELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF---- 676
+ S +EEA+AD+ GL+ + ++ L+P + K+ Y +++ + VR
Sbjct: 280 KAYGSTIEEARADLFGLYYIPDPRMVELGLVPDAEAYKAEYYAYMMNGLMTQLVRIEPGC 339
Query: 677 GLEESHGKGQALQFNWLFEKEA------FILHSDDTFSV--DFDKVEGAVESLSTEILTI 728
+EE+H + + L W E+ A ++ TF D++++ L E+ I
Sbjct: 340 NVEEAHMRNRQLIARWALEQGAEQKVVELVVRDGKTFVRINDYEQLRSLFGRLLAEVQHI 399
Query: 729 QARGDKEAASLLLQKYCTMTQP 750
++ GD EAA L++ Y P
Sbjct: 400 KSEGDYEAARQLVETYAVRIDP 421
>gi|182414859|ref|YP_001819925.1| dipeptidyl-peptidase III [Opitutus terrae PB90-1]
gi|177842073|gb|ACB76325.1| Dipeptidyl-peptidase III [Opitutus terrae PB90-1]
Length = 706
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 196/454 (43%), Gaps = 69/454 (15%)
Query: 358 SFFTVIKRRSE-----FNLDSSLS---GHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRA 409
+F+ + R+++ F L+S L+ G +V+ VG +Y P E+ +L
Sbjct: 233 AFYAEMARKAQNPRLSFGLNSQLARVDGKLVERI-WKVGGMYG----PAIEQIVGWL--- 284
Query: 410 SELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETY 465
KA +A +P+ ++ L + + + + D IAW+ + +D G ETY
Sbjct: 285 ----EKARTVAETPTQQKSLEHLIRFYRTGDIAEFDQHCIAWVSDTTPTIDFVNGFIETY 340
Query: 466 EDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQ 525
DA G + FE+ + +RD++AT ++ Q E + + A+K +V +VI
Sbjct: 341 VDAA-GKRGAFESVVSMRDEEATKRIAAISAQAQWFEDHSSIAPAHKKPNVTGISAKVIT 399
Query: 526 LIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNIL--RPIAD------ 577
+I GD + NLPN E I + G+ V L N+ A + +L P+ D
Sbjct: 400 VIGEVGDAAPATPIGINLPNAEWIREQHGSKSVSLGNIVHA-YNAVLAKSPVNDEFGASP 458
Query: 578 -VCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAK 636
V R +Q + D H HE IG S + G T L+ + +EEA+
Sbjct: 459 EVIARLKQWAPLASD---LHTDMHEV---IGHASGQINPG-VGTPDQTLKNYSATLEEAR 511
Query: 637 ADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG-------------LEESHG 683
AD+VGL+ F++ L+ ++ ++ V AG + V G LEE+H
Sbjct: 512 ADLVGLY---FILDPKLVEIGVMPTLEVG-KAGYDKYVMNGLMTQLYRVQPGHQLEEAHM 567
Query: 684 KGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDKE 735
+ + L W FE E F + D++K+ G + L EI I++ GD
Sbjct: 568 RNRQLVAAWAFEHGKADRVIERATRDGKTFFRINDYEKLRGLLGQLLREIQRIKSEGDYA 627
Query: 736 AASLLLQKYCTMTQPLKVALQKLENVQVPVDIAP 769
A L++ Y + L ++ P+++AP
Sbjct: 628 AGQALVETYGVKVD--EALLAEVHRRYAPLNVAP 659
>gi|195977252|ref|YP_002122496.1| nudix hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|195973957|gb|ACG61483.1| putative nudix hydrolase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 174
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ DV TM KTG R G YH V+A +F + + L+ QR+ D K+ WPG W
Sbjct: 3 EYWDVYTMNRLKTGRVMERGAAFVEGAYHLVVHACVFNDKGEMLIQQRQKD-KEGWPGYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQQNVINDGKFINNEFA 126
DI+ G AG++S + REL+EELG+ L F TF +N F
Sbjct: 62 DITVGGSALAGETSQEAVMRELKEELGLALDLAGVRPHFSITF------------DNGFD 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D +LV L + + LQ EV AV++ + +E ++ D F+PY
Sbjct: 110 DTFLV--LQAVDVTKLVLQTEEVQAVRWASRDEILAMI--DAGIFIPY 153
>gi|226311176|ref|YP_002771070.1| hypothetical protein BBR47_15890 [Brevibacillus brevis NBRC 100599]
gi|226094124|dbj|BAH42566.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 212
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDS 63
+QEE LD+ GQ G+ + RSEVHR+G +H+T + WI+ + E+L Q+R KD+
Sbjct: 1 MQEEQLDIFDEAGQHIGV-EARSEVHRLGLWHQTFHCWIYRVVDDQIEMLFQKRHPQKDT 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
P + DI+SAGH+ A + REL+EELG+++ + + + ++V+ I+
Sbjct: 60 CPDLLDITSAGHLLATEQP-CDGVRELEEELGLSVSFEELDQLGVI--RDVMVAPSIIDK 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
E +L PL + +Q+ EV+ + +++ E + L A +
Sbjct: 117 EMCHTFLYECDQ--PLREYRIQEEEVTGLFWVSLRELERLFAGE 158
>gi|229917507|ref|YP_002886153.1| NUDIX hydrolase [Exiguobacterium sp. AT1b]
gi|229468936|gb|ACQ70708.1| NUDIX hydrolase [Exiguobacterium sp. AT1b]
Length = 180
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV T+ +KTG T R G+YH ++ IF + E+L+Q+R FKD W MW
Sbjct: 2 EFWDVYTVDREKTGRTWQRGSRLPEGEYHLVIHVCIFNQKG-EMLIQQRQPFKDGWANMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G + GD+S +A REL+EE+G+ L L Q + + F D+
Sbjct: 61 DITVGGSATVGDTSQQAAMRELEEEIGLKLD----------LSQTRPHLTVNFDEGFDDI 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
YLV + L TLQ++EV AVK+ +E L F+PY
Sbjct: 111 YLVEM--EVDLNELTLQESEVQAVKWA--DEATILQMIQQHEFIPY 152
>gi|403743912|ref|ZP_10953391.1| NUDIX hydrolase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122502|gb|EJY56716.1| NUDIX hydrolase [Alicyclobacillus hesperidum URH17-3-68]
Length = 205
Score = 86.3 bits (212), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWP 65
+E LDVL G T PRS+VH VG +H+T + W++ E LLLQRR KD+ P
Sbjct: 2 DELLDVLDEQMNHIG-TAPRSQVHEVGWWHQTFHCWLYDCIAGEDMLLLQRRHPSKDTNP 60
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G WD+S AGH++AG+ RELQEELG+ + + V + ++ I+NEF
Sbjct: 61 GKWDVSCAGHLAAGELPE-DGVRELQEELGVAISPS--QLVKLGVARHHFRKNGVIDNEF 117
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
+ V+++ + F + EVS + IA +K L+
Sbjct: 118 SHVFVLRFGYVHDVRRFRVAADEVSGLYRIAVHSFKELV 156
>gi|15893737|ref|NP_347086.1| MutT/NUDIX family hydrolase [Clostridium acetobutylicum ATCC 824]
gi|337735660|ref|YP_004635107.1| MutT/NUDIX family hydrolase [Clostridium acetobutylicum DSM 1731]
gi|384457171|ref|YP_005669591.1| Hydrolase of MutT (Nudix) family [Clostridium acetobutylicum EA
2018]
gi|27734610|sp|Q97LV8.1|Y446_CLOAB RecName: Full=Uncharacterized Nudix hydrolase CA_C0446
gi|15023302|gb|AAK78426.1|AE007559_4 Hydrolase of MutT (Nudix) family [Clostridium acetobutylicum ATCC
824]
gi|325507860|gb|ADZ19496.1| Hydrolase of MutT (Nudix) family [Clostridium acetobutylicum EA
2018]
gi|336290113|gb|AEI31247.1| MutT/NUDIX family hydrolase [Clostridium acetobutylicum DSM 1731]
Length = 206
Score = 86.3 bits (212), Expect = 6e-14, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 18/191 (9%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDS 63
++EE LD+ + G K R EVH G +H T + W+ ++ L+ Q+R KD+
Sbjct: 1 MEEEFLDIFDEEERLIG-RKSRKEVHEKGYWHSTFHCWVVKREGKKTFLIFQKRHPLKDT 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
P M+D+SSAGHI +G+ S+ REL+EELGI+ + E + + + + GK I+
Sbjct: 60 APNMFDVSSAGHIKSGE-SIEDGVRELKEELGIDAKPN--ELINIGIIKEEFHIGKNIDR 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQL 183
EF +Y+ + N +E++TLQ+ EV + I +E LA+ F+ ++G + +
Sbjct: 117 EFCHIYIYS--NKAEIESYTLQRDEVVGLVKIEIDE----LAR----FLDNKIDGVFAEG 166
Query: 184 F--NIISQRYK 192
F N +RYK
Sbjct: 167 FIVNQEGRRYK 177
>gi|420155627|ref|ZP_14662485.1| NUDIX domain protein [Clostridium sp. MSTE9]
gi|394758856|gb|EJF41692.1| NUDIX domain protein [Clostridium sp. MSTE9]
Length = 197
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWPG 66
E LD++ G TG T R H G HRT + W+ + ++LLQ+R+ KDS PG
Sbjct: 2 EMLDIVDENGTPTGETVEREAAHLSGIRHRTSHVWLLRKRNGKTQVLLQKRSLNKDSHPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINNE 124
+D SSAGHI +G+ L S+ REL+EELGI + + V + F +N+
Sbjct: 62 CYDTSSAGHIPSGEDFLESSLRELKEELGITAAAEELICCGCCRSEYRGVFHGQSFWDNQ 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA-KDDPSFVPYD 175
++VY++ I TLQ++EV +V ++ +++ +++ K P + D
Sbjct: 122 VSNVYIL--WRDIEESELTLQESEVDSVLWMDWDKCLDMVRHKKAPHCIRID 171
>gi|315280838|ref|ZP_07869623.1| MutT/nudix family protein [Listeria marthii FSL S4-120]
gi|313615511|gb|EFR88871.1| MutT/nudix family protein [Listeria marthii FSL S4-120]
Length = 169
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H ++ IF E Q LL+Q+R K+SWP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHMVIHVCIFNEKGQ-LLIQKRQKDKESWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE+QEELG I+L K +F + F +G F
Sbjct: 61 DLSTAGSAIKGETSRQAAEREVQEELGITIDLSKTRAKFSYHF------EEG------FD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + L TLQ+ EV+ ++++ EE L + F+PY
Sbjct: 109 DYWFIT--KDVQLSDLTLQKEEVADARFVSEEELNEL--RKSGEFIPY 152
>gi|340348434|ref|ZP_08671518.1| M49 family peptidase [Prevotella dentalis DSM 3688]
gi|433653225|ref|YP_007297079.1| Peptidase family M49 [Prevotella dentalis DSM 3688]
gi|339607003|gb|EGQ11955.1| M49 family peptidase [Prevotella dentalis DSM 3688]
gi|433303758|gb|AGB29573.1| Peptidase family M49 [Prevotella dentalis DSM 3688]
Length = 651
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 161/370 (43%), Gaps = 37/370 (10%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNN---YYDSDIAWI-ELDSELDV 457
Y + + +E L +A +A + ++++ D + + + + D IAW+ E ++D
Sbjct: 225 YGPAIRQITEWLERAATVAENERQRQVIALLTDYYRTGDLRRFDDYSIAWLGEQQGQVDF 284
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G K ++E + +D +AT + + N Q E + P+D ++ + V
Sbjct: 285 VNGFIEVYGDPL-GLKGSWEGIVEYKDMEATRRTQTIAQNAQWFEDHSPVDPRFRKEKVT 343
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRPIA- 576
V+ GD + NLPN + I G+ V + N++EA ++ R
Sbjct: 344 GVTANVVCAAMLGGDEYPASAIGINLPNADWIRARHGSKSVTIGNLTEA-YRQAARGNGF 402
Query: 577 --DVCIRKEQQELVDFDSFFT---HNICHECC-HGIGP-HSITLPDGRQSTVRLELQELH 629
+ I +E + L H HEC HG G T PD L+
Sbjct: 403 DEEFVIDEETRRLTAAYGDLCDDLHTDLHECLGHGSGRLLPGTDPDA--------LKAYA 454
Query: 630 SAMEEAKADIVGLWALKFLIGRD--LLP-KSLVKSMYVSFLAGCFRS--VRFG----LEE 680
S +EEA+AD+ GL+ L R+ L+P KS Y ++ + VR +EE
Sbjct: 455 STVEEARADLFGLYYLADPKLRELGLVPDDEAYKSQYYHYMMNGLLTQLVRIKPGHQIEE 514
Query: 681 SHGKGQALQFNWLFEKE----AFILHSDDTFSV--DFDKVEGAVESLSTEILTIQARGDK 734
+H + +AL W + + + T+ D+ ++ G L E+ I++ GD
Sbjct: 515 AHMRNRALIARWCLAQGDGTVQLVKRAGKTYVRIDDYPRLRGLFARLLAEVQRIKSEGDH 574
Query: 735 EAASLLLQKY 744
EAA L+++Y
Sbjct: 575 EAARRLVEQY 584
>gi|162452139|ref|YP_001614506.1| hypothetical protein sce3866 [Sorangium cellulosum So ce56]
gi|161162721|emb|CAN94026.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum So ce56]
Length = 691
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 164/389 (42%), Gaps = 48/389 (12%)
Query: 393 LYSVPYSEEYNSYLTRASELLHKAGDMASSPS---LKRLLHSKADAFLSNNYYDSDIAWI 449
L +VPYSE Y + S L A + SPS K L + + AFL N + +D W
Sbjct: 282 LKAVPYSEAYKPEMEAVSRELKAAAEAIQSPSEAAFKAYLLAASQAFLDNRWELADEPWA 341
Query: 450 ELDSELD---VTIGPYETYEDAIFGYKATFE-AFIGIRDDKATAQVKLFGDNLQVLEQNL 505
++++E + +GP ETY + KA F +F I + T Q KL D ++
Sbjct: 342 KMNAENSAWYLRVGPDETYWEPC-SRKAGFHVSFARINQESLTWQKKL--DPVKA----- 393
Query: 506 PMDNAYKSKDVIAAPIRV----------IQLIYNSGDVKGPQ--TVAFNLPNDERIVKD- 552
M+ A+ + AP R I ++ N+G+ + T +LPN + +
Sbjct: 394 DMETAFAG--LAGAPYRARRVAFHLPDFIDVLLNAGESRAATGGTSGQSLPNWGPVATEG 451
Query: 553 RGTSMVMLKNVSEAKFKNILRPIADVCIRKEQQELVDFDSFFT--HNICHECCHGIGPHS 610
RG ++VM+ + + + LR A + K E V + + HE H +GP
Sbjct: 452 RGRTVVMVNLLQDDDSRAALREAAASLLCKTTMESVSLERPVAALGTVLHEAAHNLGPAQ 511
Query: 611 ITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGC 670
G+ L L +EE KA L+ +L + +L +L + V +
Sbjct: 512 GYKVQGKTDD-ELFGGPLAVMLEELKAQTGALFFTGWLAQKGVLDPALARMSEVRDVIWA 570
Query: 671 FRSVRFGLEESHGKGQ------ALQFNWLFEKEAFILHSDDT---------FSVDFDKVE 715
V G+ + G+ + A+Q L + A H +T FS+ DK+
Sbjct: 571 LGQVGQGMYTAGGEPRPYGHLAAIQLGSLLDAGAIGFHRGETAANGADKGCFSIQSDKLP 630
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
A E+L+ +L I+ARGDK A L + Y
Sbjct: 631 AAAEALARTVLGIKARGDKAGALRLRETY 659
>gi|116871741|ref|YP_848522.1| MutT/nudix family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740619|emb|CAK19739.1| MutT/nudix family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 169
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVVHICIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++SL +A+RE+QEELG I+L K +F + F F
Sbjct: 61 DLSAAGSALKGETSLQAAEREVQEELGITIDLSKTRAKFSYHF------------EAGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + L TLQ+ EV+ +++ EE + L K+ F+PY
Sbjct: 109 DYWFIT--QDLELSDLTLQEEEVADARFVTKEELEVL--KNAGEFIPY 152
>gi|254992304|ref|ZP_05274494.1| MutT/nudix family protein [Listeria monocytogenes FSL J2-064]
gi|405754461|ref|YP_006677925.1| MutT/nudix family protein [Listeria monocytogenes SLCC2540]
gi|404223661|emb|CBY75023.1| MutT/nudix family protein [Listeria monocytogenes SLCC2540]
Length = 169
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++SL +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSLQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+ L TLQ+ EV+ +++ EE + L + F+PY QLFN+
Sbjct: 117 --------VELSDLTLQKEEVADARFVTKEELEAL--RSSGEFIPYFF---LNQLFNL 161
>gi|406657928|ref|ZP_11066068.1| MutT/NUDIX family protein [Streptococcus iniae 9117]
gi|405578143|gb|EKB52257.1| MutT/NUDIX family protein [Streptococcus iniae 9117]
Length = 176
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ D+ T KTG R V G YH V+ IF + Q L+ QR+ D K+ WP W
Sbjct: 3 EYWDIYTSDRCKTGEKMKRGSVFPEGAYHLVVHVCIFNKKGQMLIQQRQKD-KEGWPNYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G G+SS +A RE+ EE+G+N+ FT IN N F D
Sbjct: 62 DVTIGGSALYGESSQEAAMREVAEEIGLNIDLKGVRPAFT------IN----FNQGFDDT 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+LV + LE+ LQ+ EV AV + ++ K ++ +D F+PY
Sbjct: 112 FLVQM--DLDLESLVLQEEEVQAVAWAWQDDIKQMI--NDGHFIPY 153
>gi|268608172|ref|ZP_06141899.1| NUDIX hydrolase [Ruminococcus flavefaciens FD-1]
Length = 267
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRAD 59
AE +V +E L+++ + + + PRS VHR G H TV+ W +LLQ+RA
Sbjct: 86 AEFIV-DEFLNLIDDNNRISSKSYPRSVVHRSGLLHPTVHIWFIRRRDMGVSVLLQKRAH 144
Query: 60 FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGK 119
KD P +D+S+AGH++ G +A RE+ EELGI++P + EF+ I +
Sbjct: 145 EKDICPDCYDVSAAGHVTQGGEFRHTALREIHEELGIDIPSNKLEFIG-------IRHNE 197
Query: 120 FINNEFADVYLVTTL---NPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
I NE D LV + TLQ++EVS V + +E +L+ D
Sbjct: 198 HIENEIDDSELVAVYIYRGDVHRAEMTLQESEVSEVCWAEIDELISLMKYD 248
>gi|375306798|ref|ZP_09772091.1| nudix hydrolase [Paenibacillus sp. Aloe-11]
gi|375081185|gb|EHS59400.1| nudix hydrolase [Paenibacillus sp. Aloe-11]
Length = 210
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAEST--QELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
T R E H G +H T + W+ +++ + LL Q+R D KD++PG +DI++AGH++AG+
Sbjct: 18 TASRQEAHAKGYWHHTFHCWLARDTSTGRRLLFQQRQDSKDTFPGYYDITAAGHLTAGE- 76
Query: 82 SLISAQRELQEELGINLPKDAFEFVFT--FLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
+ A REL+EELGI++P + + T + + F + E + V+ + L+ PL
Sbjct: 77 DVSQAARELEEELGIHVPFTSLTPLMTVRYESKGTAQGTSFWDREVSSVFGL--LSNQPL 134
Query: 140 EAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGG 179
EA+ LQQ EV+ + E+ L P + + G
Sbjct: 135 EAYRLQQEEVAGLYEADLEQALALFEGSIPFLEAHGITSG 174
>gi|413939289|gb|AFW73840.1| hypothetical protein ZEAMMB73_534623 [Zea mays]
Length = 70
Score = 85.5 bits (210), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 8 EEHLDVLT--MTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
EE L VLT +KTGI++PRSEVHR G+YHR VN WI++EST ELLLQRRAD ++ WP
Sbjct: 9 EERLGVLTPQCLREKTGISEPRSEVHRDGNYHRAVNVWIYSESTGELLLQRRADCEELWP 68
Query: 66 G 66
G
Sbjct: 69 G 69
>gi|409123069|ref|ZP_11222464.1| peptidase family M49 [Gillisia sp. CBA3202]
Length = 711
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 40/331 (12%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW+E + +D E Y D + GY+ ++E+ + I+D + + ++K+ DN+Q
Sbjct: 314 DYNVAWVEATEGNIDYINSFIEVYNDPL-GYRGSYESIVQIKDFEMSKKMKVLEDNVQWF 372
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K V+ + + + +GD + NLPN I G+ V L
Sbjct: 373 EDNSPLMLEHKKKSVVGVTYKTVIVAGEAGDASPSTPIGVNLPNANWIRAAHGSKSVSLG 432
Query: 562 NVSEAKFKN-----ILRPIADVCIRKEQQELVDFDSFFTHNI--CHECCHGIGPHSITLP 614
N+ EA + N +L+ A +E V + + N H H + H+
Sbjct: 433 NIIEA-YNNAGSSGVLQEFA------HDEEEVALEEKYGQNADKLHTALHEVVGHASGQL 485
Query: 615 DGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSV 674
+ + L+ S +EE +AD+VGL+ +L+ + L + +A +
Sbjct: 486 NPGVGETKETLKNYASTLEEGRADLVGLY---YLMDPKIQELGLTDDWKKTGMAAYDGYI 542
Query: 675 RFGL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDK 713
R GL EE+H + + W+FEK E F + ++D+
Sbjct: 543 RNGLMTQLRRLNIGDDVEEAHMRNRQWVSAWVFEKGKEEGVIEKVTRDGKTYFDIKNYDR 602
Query: 714 VEGAVESLSTEILTIQARGDKEAASLLLQKY 744
+ L E I++ GD +AA L++ Y
Sbjct: 603 LRELFGELLKETQRIKSEGDFDAAKNLVENY 633
>gi|294937152|ref|XP_002781984.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239893197|gb|EER13779.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 240
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG + R++ H G +HR+V+ W + +E+L+QRR+ KD+ PG WD+S GH++ D
Sbjct: 71 TGQLRSRADCHAQGHWHRSVHIWFYNPDEREVLVQRRSLLKDTNPGRWDVSVGGHVAGYD 130
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+ SA RE++EELG+++ E V + +I+ E + + L+
Sbjct: 131 DVMASAVREVREELGVSVKPSDLEEVGVVATE--ARGPGYIDRELKHIAIYPWRG--RLQ 186
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFN-IISQRY 191
L EV+ +++ + E L + D FV + N Y L N ++ QR+
Sbjct: 187 QLQLDPAEVTEAEWMPWVEVHRRLIRGDREFVAF--NREYIDLLNHVLLQRF 236
>gi|402837406|ref|ZP_10885931.1| NUDIX domain protein [Eubacteriaceae bacterium OBRC8]
gi|404393713|ref|ZP_10985601.1| hypothetical protein HMPREF9630_02136 [Eubacteriaceae bacterium
CM2]
gi|402275523|gb|EJU24676.1| NUDIX domain protein [Eubacteriaceae bacterium OBRC8]
gi|404278778|gb|EJZ44299.1| hypothetical protein HMPREF9630_02136 [Eubacteriaceae bacterium
CM2]
Length = 174
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+LD+ T +TG T R G Y V+ IF S ++++Q+R KD W GMW
Sbjct: 2 EYLDLYTRDRVRTGNTILRGTKVPEGFYRLVVHVCIF-NSKGQMIIQQRQTCKDDWGGMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN--NEFA 126
D+S+ G AGDSS +A+RE+ EE+G ++ +D I IN + F
Sbjct: 61 DLSAGGSAKAGDSSQNAAKREVLEEIGYDIEED-------------IRPALTINFKSGFN 107
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVN 177
DVY++ + + + LQ+ EV AVK+ E K ++ +D +F+PY ++
Sbjct: 108 DVYIIKS--DLDISNLKLQEEEVKAVKWATLSEIKAMI--EDGTFIPYHIS 154
>gi|256545314|ref|ZP_05472678.1| MutT/NUDIX family protein [Anaerococcus vaginalis ATCC 51170]
gi|256398995|gb|EEU12608.1| MutT/NUDIX family protein [Anaerococcus vaginalis ATCC 51170]
Length = 175
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 16/168 (9%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E++D+ KTG R ++ G Y ++ IF + LL+Q+R+ K SWP +
Sbjct: 2 KEYVDLYDNFRNKTGDIIERRDIVPRGLYRLIIHVLIF-DRKGRLLIQKRSKIKKSWPNL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV-INDGKFINNEFA 126
WD++ +G +S+G+SS ++A REL EELGI ++ F+ N+ +N G I+
Sbjct: 61 WDLTVSGAVSSGESSQLAASRELFEELGI-------KYDFSKSYPNISVNTGFRID---- 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
DV++++ N I L LQ+ EVS K+++ E ++ D+ FVPY
Sbjct: 110 DVFIISNKN-IDLNKLKLQKEEVSDAKFVSLNELIKII--DEKEFVPY 154
>gi|46906603|ref|YP_012992.1| MutT/nudix family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|254854085|ref|ZP_05243433.1| MutT/nudix family protein [Listeria monocytogenes FSL R2-503]
gi|254932666|ref|ZP_05266025.1| MutT/nudix family protein [Listeria monocytogenes HPB2262]
gi|300765625|ref|ZP_07075603.1| MutT/nudix family protein [Listeria monocytogenes FSL N1-017]
gi|404279917|ref|YP_006680815.1| MutT/nudix family protein [Listeria monocytogenes SLCC2755]
gi|404285733|ref|YP_006692319.1| MutT/nudix family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405748725|ref|YP_006672191.1| MutT/nudix family protein [Listeria monocytogenes ATCC 19117]
gi|405751585|ref|YP_006675050.1| MutT/nudix family protein [Listeria monocytogenes SLCC2378]
gi|417316650|ref|ZP_12103291.1| MutT/nudix family protein [Listeria monocytogenes J1-220]
gi|424713238|ref|YP_007013953.1| Uncharacterized Nudix hydrolase lmo0368 [Listeria monocytogenes
serotype 4b str. LL195]
gi|424822101|ref|ZP_18247114.1| hypothetical protein LMOSA_12670 [Listeria monocytogenes str. Scott
A]
gi|46879868|gb|AAT03169.1| MutT/nudix family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|258607480|gb|EEW20088.1| MutT/nudix family protein [Listeria monocytogenes FSL R2-503]
gi|293584225|gb|EFF96257.1| MutT/nudix family protein [Listeria monocytogenes HPB2262]
gi|300513613|gb|EFK40682.1| MutT/nudix family protein [Listeria monocytogenes FSL N1-017]
gi|328475982|gb|EGF46700.1| MutT/nudix family protein [Listeria monocytogenes J1-220]
gi|332310781|gb|EGJ23876.1| hypothetical protein LMOSA_12670 [Listeria monocytogenes str. Scott
A]
gi|404217925|emb|CBY69289.1| MutT/nudix family protein [Listeria monocytogenes ATCC 19117]
gi|404220785|emb|CBY72148.1| MutT/nudix family protein [Listeria monocytogenes SLCC2378]
gi|404226552|emb|CBY47957.1| MutT/nudix family protein [Listeria monocytogenes SLCC2755]
gi|404244662|emb|CBY02887.1| MutT/nudix family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|424012422|emb|CCO62962.1| Uncharacterized Nudix hydrolase lmo0368 [Listeria monocytogenes
serotype 4b str. LL195]
Length = 169
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++SL +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSLQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+ L TLQ+ EV+ +++ EE + L + F+PY QLFN+
Sbjct: 117 --------VELSDLTLQKEEVADARFVTKEELEVL--RSSGEFIPYFF---LNQLFNL 161
>gi|430751404|ref|YP_007214312.1| isopentenyldiphosphate isomerase [Thermobacillus composti KWC4]
gi|430735369|gb|AGA59314.1| isopentenyldiphosphate isomerase [Thermobacillus composti KWC4]
Length = 217
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWP 65
EE D+ + G T RSEVH G +HR+ + W+ + L++ QRRA KD++P
Sbjct: 4 EEWFDIYDEAMRPIG-TAARSEVHARGHWHRSFHCWLARPAGGGLMVRFQRRASGKDTFP 62
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFINN 123
+DI+ AGH++AG++ A RE++EE+G+++P + F+F +++ + FI+
Sbjct: 63 DCFDITVAGHLAAGETHR-DAAREIREEIGLDIPFEKLTFLFEHRSVREGIARGVPFIDR 121
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
E + VY L+ PL++F LQ E + +
Sbjct: 122 EISRVY--GALSDAPLDSFRLQIEETAGI 148
>gi|319951615|ref|YP_004162882.1| nudix hydrolase [Cellulophaga algicola DSM 14237]
gi|319420275|gb|ADV47384.1| NUDIX hydrolase [Cellulophaga algicola DSM 14237]
Length = 182
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 86/143 (60%), Gaps = 6/143 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G KTG T +S HR G +H+TV+ W + ++ Q +LLQ+R +K +P +
Sbjct: 2 DELIDLLDADGNKTGETVLKSIAHRSGIFHQTVHIWFYTKN-QYILLQQRGKYKTIFPLL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG-KFINNEFA 126
+D+S AGHI++G+ +A RE+ EE+G+N+ K + + F +++ N + I+ EF
Sbjct: 61 FDVSVAGHIASGEEIEDAAVREIAEEIGLNISKKELKKIGVF--KSIQNHSPELIDAEFH 118
Query: 127 DVYLVTTLNPIPLEAFTLQQTEV 149
++ +PL+ Q++EV
Sbjct: 119 HAFIAEL--KVPLQELIKQESEV 139
>gi|270340081|ref|ZP_06006974.2| M49 family peptidase [Prevotella bergensis DSM 17361]
gi|270332770|gb|EFA43556.1| M49 family peptidase [Prevotella bergensis DSM 17361]
Length = 682
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 30/323 (9%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E + ++D G E Y D + G K ++E + +D AT + +L N Q E +
Sbjct: 296 IEWLKEQEGQVDFINGFIEVYGDPL-GLKGSWEGLVEYKDLVATRRTQLVSQNAQWFEDH 354
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++ V VI GD+ + NLPN + I G+ + + N++
Sbjct: 355 SPVDPRFRKPHVTGVTATVICAAMLGGDMYPASAIGVNLPNADWIRAQYGSKSITIGNLT 414
Query: 565 EAKFKNILRPIAD--VCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQ 618
EA K D I ++ + L+D H HEC HG G LP
Sbjct: 415 EAYKKTAHGNGFDEEFVIDEDTRALIDRYGDLCDDLHTDLHECLGHGSGQ---LLP---- 467
Query: 619 STVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLPKS-LVKSMYVSFLAGCFRS-- 673
L+ S EEA+AD+ GL+ L L+ LLP + KS Y ++ +
Sbjct: 468 GVAPDALKSYASTNEEARADLFGLYYLADPKLVELGLLPDADAYKSQYYHYMMNGLMTQL 527
Query: 674 --VRFG--LEESHGKGQALQFNWLFEKEAFIL----HSDDTFSV--DFDKVEGAVESLST 723
+R G +EESH + +AL +W E+ ++ D T+ D+ ++ L +
Sbjct: 528 VRIRPGHQIEESHMRNRALIAHWCLEQGDHVVELVKRGDKTYVQINDYVALQQLFGQLLS 587
Query: 724 EILTIQARGDKEAASLLLQKYCT 746
E+ I++ GD E A L+++Y
Sbjct: 588 EVQRIKSEGDLEGARRLVERYAV 610
>gi|188995509|ref|YP_001929761.1| dipeptidyl-peptidase III [Porphyromonas gingivalis ATCC 33277]
gi|188595189|dbj|BAG34164.1| putative dipeptidyl peptidase III [Porphyromonas gingivalis ATCC
33277]
Length = 906
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 196/496 (39%), Gaps = 79/496 (15%)
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
K NFY P + + E E +L E E+ S F L++ L
Sbjct: 183 KASSVNFYAPGITRAEAESHYKNLIEALPENERSC------PPSFGLNTRLIRSTSGELK 236
Query: 385 HSVGSIYDLYS-------------VPYSE-EYNSYLTRASELLHKAGDMASSPSLKRLLH 430
V I LYS +PY+E E + R ++ GD+ RL
Sbjct: 237 DEVCCIDGLYSPAIEAVVASLEAAIPYTENEEQAACIRLLCDYYRTGDV-------RLY- 288
Query: 431 SKADAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
D F I W+E + + +D G E Y D I G ++E + ++D++A
Sbjct: 289 ---DRFC--------IRWVENNRTRIDFINGFTEVYADPI-GIHGSWEGLVHMQDEEAGR 336
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ ++ ++ E + P+D ++ K+ V+ ++ +GD + NLPN + I
Sbjct: 337 RTRIISEHAGWFEAHSPIDARFRKKNPHGISATVVNVLTIAGDSYPATPIGINLPNADWI 396
Query: 550 VKDRGTSMVMLKNVSEAKFKNILRP-------IADVCIRKEQQELVDF-DSFFTHNICHE 601
+ G+ V + N+++A + + R I D +R+ + D DS H HE
Sbjct: 397 RAEHGSKSVTIDNITDA-YNHAARGTGLYEEFIPDEEVRRHVELHADLTDSL--HTDLHE 453
Query: 602 CC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLW--------ALKFLIGRD 652
C HG G +P L E S +EE +AD+ L+ L L D
Sbjct: 454 CLGHGSGQLLPGVPGD-------ALGEHASTLEETRADLFALYFLADPKMIELGLLTDPD 506
Query: 653 LLPKSLVKSMYVSFLAGCFRSVRF-GLEESHGKGQALQFNWLFEKE------AFILHSDD 705
+ K M + R R +EE+H + +AL ++ E + +
Sbjct: 507 AYKANYYKYMLNGLMTQLVRIKRGEEIEEAHMRNRALIARYVLEHAERPGAMSLVCEEGK 566
Query: 706 TFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQV 763
T V D++ V + L TE+ I++ GD A L+++Y PL +++
Sbjct: 567 TALVIKDYEAVRAIIAGLLTEVQRIKSEGDYTAGKALVERYAVHVDPL--LHEEVLMRYA 624
Query: 764 PVDIAPTFTAVNKLLQ 779
+DIAP VN L+
Sbjct: 625 KLDIAPYKGFVNPRLR 640
>gi|325279825|ref|YP_004252367.1| Dipeptidyl-peptidase III [Odoribacter splanchnicus DSM 20712]
gi|324311634|gb|ADY32187.1| Dipeptidyl-peptidase III [Odoribacter splanchnicus DSM 20712]
Length = 636
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 165/373 (44%), Gaps = 39/373 (10%)
Query: 401 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWIELD-SELD 456
+Y L R L KA A + ++++ D + + + D I W++ D + +D
Sbjct: 211 KYGQELARVVAWLEKAIPYAYNEQQQKVIRLLIDYYKTGDLKLFDRYSIEWLKEDQAPVD 270
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
G E Y D + YKA++E+ + I D +A + + EQ+ P+ +K ++V
Sbjct: 271 FINGFIEVYGDPL-AYKASWESVVEIVDQEAGERTRKLAGEALWFEQHAPIREEFKKQEV 329
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS-----EAKFKNI 571
RV+Q+ GD + NLPN E I + G+ V L N++ AK +
Sbjct: 330 KGITARVMQVAMLGGDCHPATPIGINLPNAEWIRERYGSKSVTLDNITYAYDMAAKSSGM 389
Query: 572 LRPIA--DVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQEL 628
+ A D IR ++ + H HEC HG G LP L+
Sbjct: 390 IDEFAGSDEEIRLAREWGTIGSN--VHTDLHECLGHGSGK---MLP----GVTTEALRNY 440
Query: 629 HSAMEEAKADIVGLWAL--KFLIGRDLLPK-SLVKSMYVSFLAGC----FRSVRFG--LE 679
+S +EEA+AD+ L+ + L+ ++P + K+ Y S++ ++FG LE
Sbjct: 441 YSTIEEARADLFALYYIMDPKLVELGIIPSLEVAKAEYNSYIRNGLLVQLTRIKFGDRLE 500
Query: 680 ESHGKGQALQFNWLFE--KEAFIL----HSDDTFSV--DFDKVEGAVESLSTEILTIQAR 731
ESH + + W +E KEA ++ + T+ + DFD + L E+ I++
Sbjct: 501 ESHMRNRQTIAAWAYEQGKEANVIEKVQRAGKTYFIIRDFDALRVLFGQLLGEVQRIKSE 560
Query: 732 GDKEAASLLLQKY 744
GD E A L++ Y
Sbjct: 561 GDFEGARKLIETY 573
>gi|422414816|ref|ZP_16491773.1| MutT/nudix family protein [Listeria innocua FSL J1-023]
gi|313625183|gb|EFR95034.1| MutT/nudix family protein [Listeria innocua FSL J1-023]
Length = 169
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNVDRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++SL +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSLQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ L TLQ EV+ +++ EE + L + F+PY
Sbjct: 117 --------VELSNLTLQTEEVADARFVTKEELEAL--RSSGEFIPY 152
>gi|288802218|ref|ZP_06407658.1| peptidase, M49 family [Prevotella melaninogenica D18]
gi|288335185|gb|EFC73620.1| peptidase, M49 family [Prevotella melaninogenica D18]
Length = 663
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 180/423 (42%), Gaps = 65/423 (15%)
Query: 401 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDI---AWI-ELDSELD 456
+Y + + + L++A D + +++ + + + +D DI W+ E + +D
Sbjct: 228 KYGAAIEKIVYWLNRAKDFVENAQQLHVINLLIRYYETGDLHDFDIYSIEWLREQEGRID 287
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
G E Y D + G K ++E + +D +AT + + N Q E + P+D ++ V
Sbjct: 288 FINGFIEVYGDPM-GLKGSWEGIVEYKDLEATHRTQAISANAQWFEDHSPVDPQFRKAIV 346
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA--------KF 568
VI GD + NLPN + I + G+ V + N++ A F
Sbjct: 347 KGVTANVICAAMLGGDEYPASAIGINLPNADWIRAEHGSKSVTISNLTHAYDMAAKGNGF 406
Query: 569 KNILRPIADVCIRKEQQELVDFDSFFTHNI---CHECC-HGIG---PHSITLPDGRQSTV 621
+ AD C +L+D + T N+ HEC HG G P T PD
Sbjct: 407 REEFVIDADTC------KLLDLYADKTDNLHTDLHECLGHGSGRLLPG--TDPDA----- 453
Query: 622 RLELQELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCF--RSVRF 676
L+ + +EEA+AD+ GL+ + FL L K K+ Y S++ + VR
Sbjct: 454 ---LKNYGNTIEEARADLFGLYYIADQNFLELGLLDSKEAYKAQYYSYMMNGLLTQQVRI 510
Query: 677 G----LEESHGKGQALQFNWLFE--KE----AFILHSDDTFSV--------DFDKVEGAV 718
+EESH + +AL W E KE I +D S D+D +
Sbjct: 511 KPGKQIEESHMQNRALIAQWAMELGKENNVVELITCADKITSESKTYVRINDYDALRNIF 570
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVA--LQKLENVQVPVDIAPTFTAVNK 776
EI I++ GD EAA +L++KY P+ A L++ E ++IAP +N
Sbjct: 571 AYQLAEIQRIKSEGDFEAARMLVEKYAINLDPVLHAEVLRRYE----ALNIAPYKGFINP 626
Query: 777 LLQ 779
+L+
Sbjct: 627 ILK 629
>gi|34540154|ref|NP_904633.1| M49 family peptidase [Porphyromonas gingivalis W83]
gi|419970664|ref|ZP_14486149.1| DNA alkylation repair enzyme [Porphyromonas gingivalis W50]
gi|34396466|gb|AAQ65532.1| peptidase, M49 family [Porphyromonas gingivalis W83]
gi|392610456|gb|EIW93235.1| DNA alkylation repair enzyme [Porphyromonas gingivalis W50]
Length = 886
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 196/496 (39%), Gaps = 79/496 (15%)
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATN 384
K NFY P + + E E +L E E+ S F L++ L
Sbjct: 163 KASSVNFYAPGITRAEAESHYKNLIEALPENEKSC------PPSFGLNTRLIRSTSGELK 216
Query: 385 HSVGSIYDLY-------------SVPYSE-EYNSYLTRASELLHKAGDMASSPSLKRLLH 430
V I LY ++PY+E E + R ++ GD+ RL
Sbjct: 217 DEVCCIDGLYGPAIEAVVASLEAAIPYTENEEQAACIRLLCDYYRTGDI-------RLY- 268
Query: 431 SKADAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATA 489
D F I W+E + + +D G E Y D I G ++E + ++D++A
Sbjct: 269 ---DRFC--------IRWVENNRTRIDFINGFTEVYADPI-GIHGSWEGLVHMQDEEAGR 316
Query: 490 QVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERI 549
+ ++ ++ E + P+D ++ K+ V+ ++ +GD + NLPN + I
Sbjct: 317 RTRIISEHAGWFEAHSPIDARFRKKNPHGISATVVNVLTIAGDSYPATPIGINLPNADWI 376
Query: 550 VKDRGTSMVMLKNVSEAKFKNILRP-------IADVCIRKEQQELVDF-DSFFTHNICHE 601
+ G+ V + N+++A + + R I D +R+ + D DS H HE
Sbjct: 377 RAEHGSKSVTIDNITDA-YNHAARGTGLYEEFIPDEEVRRHVELHADLTDSL--HTDLHE 433
Query: 602 CC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLW--------ALKFLIGRD 652
C HG G +P L E S +EE +AD+ L+ L L D
Sbjct: 434 CLGHGSGQLLPGVPGD-------ALGEHASTLEETRADLFALYFLADPKMIELGLLTDPD 486
Query: 653 LLPKSLVKSMYVSFLAGCFRSVRF-GLEESHGKGQALQFNWLFEKE------AFILHSDD 705
+ K M + R R +EE+H + +AL ++ E + +
Sbjct: 487 AYKANYYKYMLNGLMTQLVRIKRGEEIEEAHMRNRALIARYVLEHAERPGAMSLVCEEGK 546
Query: 706 TFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQV 763
T V D++ V + L TE+ I++ GD A L+++Y PL +++
Sbjct: 547 TALVIKDYEAVRAIIAGLLTEVQRIKSEGDYTAGKALVERYAVHVDPL--LHEEVLTRYA 604
Query: 764 PVDIAPTFTAVNKLLQ 779
+DIAP VN L+
Sbjct: 605 KLDIAPYKGFVNPRLR 620
>gi|422420955|ref|ZP_16497908.1| MutT/nudix family protein [Listeria seeligeri FSL S4-171]
gi|313639562|gb|EFS04388.1| MutT/nudix family protein [Listeria seeligeri FSL S4-171]
Length = 169
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ Q TG T R E + G+ H V+ IF Q LL+Q+R K+SW G W
Sbjct: 2 EKWDLYDNQRQVTGKTHIRGEKMQPGELHLVVHVCIFNAKNQ-LLIQKRQKDKESWSGYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE+ EELG I+L + +F F F +N F
Sbjct: 61 DLSAAGSALKGETSQQAAEREVHEELGITIDLSNERAKFSFHF------------DNGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +TT I L LQQ EV+ +++ E +NL + +PY
Sbjct: 109 DYWFITT--NIELNDLKLQQEEVADARFVTKAELENLSTTGE--MIPY 152
>gi|291522878|emb|CBK81171.1| Isopentenyldiphosphate isomerase [Coprococcus catus GD/7]
Length = 178
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPG 66
E LDV+ G TG T RS H G HRT + W+ ++ E+LLQ+R+D KDS+PG
Sbjct: 2 ELLDVVDENGIPTGETVERSIAHAKGIRHRTSHVWLLRRRSEGVEVLLQKRSDNKDSFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQQNVINDGKFINNE 124
+D SSAGHI AG SA REL+EELG+ + ++ + F +++
Sbjct: 62 CYDTSSAGHIPAGVDFEDSALRELREELGLTANSSELNDCGLIRIQSESFFHGAPFKDDQ 121
Query: 125 FADV-YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162
+ V Y+ + P E LQ +EVS V ++ +E +
Sbjct: 122 VSKVFYIWKDVEP---ETMKLQVSEVSEVIWMPLDECRR 157
>gi|409197144|ref|ZP_11225807.1| putative membrane attached peptidase [Marinilabilia salmonicolor
JCM 21150]
Length = 659
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 192/425 (45%), Gaps = 49/425 (11%)
Query: 353 QEDATSFFTVIK-----RRSEFNLDSSLS---GHIVDATNHSVGSIYDLYSVPYSEEYNS 404
Q++A SF+ K R ++S L+ G IV+ T + G LYS E
Sbjct: 181 QQEAESFYASKKNPEDKRPVSHGMNSLLTKENGKIVEKTWKTGG----LYSKAI--EKIV 234
Query: 405 YLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIE-LDSELDVTIGPYE 463
Y + + L+ + SL R + D N + +I W++ +S +D G E
Sbjct: 235 YWLKKAILVAENSQQKKVISLLREFYETGDL---NTFDQYNIEWLQDQNSHVDFINGFIE 291
Query: 464 TYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRV 523
TY D + G KA++E+ + ++ +AT + ++ N Q E + P++ +K ++V +V
Sbjct: 292 TYGDPL-GLKASWESVVNFKNTEATHRTEIISQNAQWFEDHSPINKRFKKEEVRGVSAKV 350
Query: 524 IQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP---IADVCI 580
I + GD + NLPN + + K+ G+ V ++N++ A ++ + + + C
Sbjct: 351 INVAMLGGDCYPHTPIGINLPNADWLRKEYGSKSVTIENITYA-YEQAAKGTGFLEEFCY 409
Query: 581 RKEQ---QELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKA 637
E+ + F + H HEC +G S L +G EL+ + +EEA+A
Sbjct: 410 SDEEIARHKEYGFQAGNLHTDLHEC---LGHGSGQLLEGISGD---ELKAYGAVIEEARA 463
Query: 638 DIVGLWAL--KFLIGRDLLP-KSLVKSMYVSFLAGCFRS----VRFG--LEESHGKGQAL 688
D+ L+ + LI LL + K+ Y +++ + + G +E++H + + L
Sbjct: 464 DLFALYYIGDAKLIELGLLTNEEAFKAEYDNYIRNGLLTQITRISLGDNIEQAHMRNRQL 523
Query: 689 QFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDKEAASLL 740
+W +EK E I + F + +++ + L EI I++ GD E+A L
Sbjct: 524 IASWAYEKGKAQNVIEKMINNGKTYFVINNYEALRKLFAELLAEIQRIKSEGDFESAKNL 583
Query: 741 LQKYC 745
++ Y
Sbjct: 584 VETYA 588
>gi|345021155|ref|ZP_08784768.1| NUDIX hydrolase [Ornithinibacillus scapharcae TW25]
Length = 172
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R E + G+YH V+ IF + E+L+Q+R FK+ WP MWD+++ G AGD+S I+A
Sbjct: 20 RGEELQPGEYHLVVHVCIF-NANGEMLIQQRQPFKEGWPNMWDVTAGGSAVAGDTSQIAA 78
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQ 146
+REL EE+G+ + T + V N D+YLV + L LQ+
Sbjct: 79 ERELYEEIGLKVDLQHKSPHLTINTERVFN----------DIYLVE--KNVNLHTLKLQE 126
Query: 147 TEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
EV AVK+ + +E ++ + + F+PY
Sbjct: 127 EEVQAVKWASLDEIFVMIRQGE--FIPY 152
>gi|310640073|ref|YP_003944831.1| nudix hydrolase [Paenibacillus polymyxa SC2]
gi|386039255|ref|YP_005958209.1| mutT/NUDIX family protein [Paenibacillus polymyxa M1]
gi|309245023|gb|ADO54590.1| Uncharacterized Nudix hydrolase [Paenibacillus polymyxa SC2]
gi|343095293|emb|CCC83502.1| mutT/NUDIX family protein [Paenibacillus polymyxa M1]
Length = 210
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAEST--QELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
T R E H G +H T + W+ +++ + LL Q+R D KD++PG +DI++AGH+++G+
Sbjct: 18 TASRQEAHAKGYWHHTFHCWLARDTSTGRRLLFQQRQDTKDTFPGCYDITAAGHLTSGE- 76
Query: 82 SLISAQRELQEELGINLPKDAFEFVFT--FLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
+ A REL+EELGI +P + + T + + F + E + V+ + L+ PL
Sbjct: 77 DMSQAARELEEELGIYVPFTSLTPLMTVRYESKGTAQGTSFWDREVSSVFGL--LSNQPL 134
Query: 140 EAFTLQQTEVSAV 152
EA+ LQQ EV+ +
Sbjct: 135 EAYCLQQEEVAGL 147
>gi|374321950|ref|YP_005075079.1| Nudix hydrolase [Paenibacillus terrae HPL-003]
gi|357200959|gb|AET58856.1| Nudix hydrolase [Paenibacillus terrae HPL-003]
Length = 210
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAEST--QELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
T R + H G +H T + W+ +++ + LL Q+R D KD++PG +DI++AGH++AG+
Sbjct: 18 TASRQDAHAKGYWHHTFHCWLARDTSTGRRLLFQQRQDTKDTFPGYYDITAAGHLTAGE- 76
Query: 82 SLISAQRELQEELGINLPKDAFEFVFTFLQQN--VINDGKFINNEFADVYLVTTLNPIPL 139
+ A REL+EELGI++P + + T ++ F + E + V+ + L+ PL
Sbjct: 77 DVSQAARELEEELGIHVPFTSLTPLMTVRHESKGTAQGTSFWDREVSSVFGL--LSSQPL 134
Query: 140 EAFTLQQTEVSAV 152
EA+ LQQ EV+ +
Sbjct: 135 EAYRLQQEEVAGL 147
>gi|224003649|ref|XP_002291496.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973272|gb|EED91603.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 259
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
Query: 4 SVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF----AESTQELLLQRRAD 59
S++ E DV + + TG K R +H+ G +HR+V W+ + +LLQRR+
Sbjct: 57 SIITSEWGDVYYPSPKPTGEIKERGRIHKDGIWHRSVQVWVVQKDECNNDVRVLLQRRSK 116
Query: 60 FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP----------KDAFEFVFT- 108
+KD+ P + D+S AGH+++GD L S REL+EELG N + + F+ T
Sbjct: 117 YKDTHPNLLDVSCAGHVNSGDDILQSTMRELEEELGGNGCIREYYSIEDIQQSKAFIGTS 176
Query: 109 FLQQNVINDGKFINNEFADVYLVTTLNPIPLEA---FTLQQTEVSAVKYIAYEEYKNLLA 165
++ + G F E+ DV+++ +PLE L EV+ + ++ ++ L
Sbjct: 177 SIKGSTAKFGTFHCQEYQDVFILWWKQDVPLETRLFAPLVHEEVAGFEILSGKKMIRRLR 236
Query: 166 KDDPSFVP 173
D VP
Sbjct: 237 DSDEELVP 244
>gi|403388161|ref|ZP_10930218.1| NUDIX hydrolase [Clostridium sp. JC122]
Length = 166
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG K + E G+YH + AWI S ++L+Q+R++ D PG+W
Sbjct: 2 EVWDIYDKNGYKTGKVKEKGEKLNSGEYHLAMEAWII-NSDSKILVQKRSNRCDILPGVW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G + +G++S+ RE+ EELGI + +D EF+ + ++I D+
Sbjct: 61 GLTT-GRMISGENSIDGCIREVNEELGIKISEDEMEFMRRIFRTDLI----------WDL 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
YLV I LE LQ+ EV+ K+I E+K +L
Sbjct: 110 YLVR--KDIDLEELVLQENEVAEAKWITVNEFKEML 143
>gi|289433684|ref|YP_003463556.1| MutT/NUDIX hydrolase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169928|emb|CBH26468.1| MutT/NUDIX hydrolase family protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 169
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ Q TG T R E + G+ H V+ IF Q LL+Q+R K+SWP W
Sbjct: 2 EKWDLYDNQRQVTGKTHIRGEKMQPGELHLVVHVCIFNAENQ-LLIQKRQKDKESWPEYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE+ EELG I+L + +F F F +N F
Sbjct: 61 DLSAAGSALKGETSQQAAEREVHEELGITIDLSNERAKFSFHF------------DNGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +TT I L LQQ EV+ +++ E +NL + +PY
Sbjct: 109 DYWFITT--NIELNDLKLQQEEVADARFVTKAELENLSTTGE--MIPY 152
>gi|398818446|ref|ZP_10577037.1| isopentenyldiphosphate isomerase [Brevibacillus sp. BC25]
gi|398027888|gb|EJL21418.1| isopentenyldiphosphate isomerase [Brevibacillus sp. BC25]
Length = 209
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 8/164 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDS 63
+QEE LD+ GQ G+ + RSEVHR+G +H+T + WI+ + ELL Q+R KD+
Sbjct: 1 MQEEQLDIFDEAGQHIGV-EARSEVHRLGLWHQTFHCWIYRVVDDQIELLFQKRHPQKDT 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
P + DI+SAGH+ A + REL+EELG+++ + + + ++V+ I+
Sbjct: 60 CPNLLDITSAGHLLASEQP-CDGVRELEEELGLSVSFEELDKLGVI--RDVMVAPSIIDK 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
E +L L + +Q+ EV+ + +++ E + L A +
Sbjct: 117 EMCHTFLYECDQ--LLHEYRVQEEEVTGLFWVSLHELERLFAGE 158
>gi|357015282|ref|ZP_09080281.1| hydrolase [Paenibacillus elgii B69]
Length = 214
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWP 65
EE D+ G RSEVH G +H+T + WI + + LL Q R KD++P
Sbjct: 5 EEIFDIFDERMNPAG-QASRSEVHARGLWHQTFHCWIVEPTDGDAVLLFQERHPGKDTFP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
+ D S AGH+ AG+ ++ REL+EELG+N+P +A F +++VI++ I+ EF
Sbjct: 64 SLLDTSCAGHLLAGE-AVEDGVRELEEELGLNVPFEALIPCGLFAEEDVISE-SCIDREF 121
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
V+L +N PL + LQ EV+ + I E+ + L
Sbjct: 122 CHVFL--HVNRQPLTRYRLQPEEVTGLYRIPLEQVRKL 157
>gi|345868252|ref|ZP_08820245.1| peptidase M49 family protein [Bizionia argentinensis JUB59]
gi|344047307|gb|EGV42938.1| peptidase M49 family protein [Bizionia argentinensis JUB59]
Length = 675
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 143/332 (43%), Gaps = 42/332 (12%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW + +D G E Y D + GY +FE + I D + ++ + +N Q
Sbjct: 285 DYNVAWTSATEGNIDYINGFIEVYNDPL-GYTGSFETIVQITDFDMSEKMSVLSENAQWF 343
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V+ +V+ + +GD + NLPN I G+ V L
Sbjct: 344 EDNSPLMEDHKKKNVVGVSYKVVNVAAEAGDASPSTPIGVNLPNANWIRAAVGSKSVSLG 403
Query: 562 NV--------SEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ S + + ++ + ++ ++ D H HE +G S L
Sbjct: 404 NIINAYNNAGSTGRLQEFAHDADEIKLEEKYGQVAD----KLHTALHEV---VGHASGQL 456
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV---KSMYVSFLAGC 670
G T + L+ S +EE +AD+VGL+ +L + LV KS+ ++ G
Sbjct: 457 NPGIGET-KETLKTYASTLEEGRADLVGLY---YLYNSKIQELGLVDDWKSLGMAAYDGY 512
Query: 671 FRS------VRFGL----EESHGKGQALQFNWLFE--KEAFILH-----SDDTFSV-DFD 712
R+ +R L EESH + + W++E KEA ++ F++ D+D
Sbjct: 513 IRNGLMTQLIRLNLGDDVEESHMRNRQWVSAWVYEKGKEANVIEKIKRDGKTYFNITDYD 572
Query: 713 KVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
K+ L E I++ GD A L++ Y
Sbjct: 573 KLHDLFGQLLRETQRIKSEGDYAAVQALVEDY 604
>gi|372209436|ref|ZP_09497238.1| NUDIX hydrolase [Flavobacteriaceae bacterium S85]
Length = 179
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D++ + GQ TG +S H+ G H +V+ W + + Q++L+Q+R K +P +
Sbjct: 2 DELIDIVNLKGQPTGNACMKSFAHQNGILHGSVHLWCY-NTQQQILVQKRKASKTIFPNL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD+S AGHI++G+ L + RE QEE+G+++ E++ + ++ +G I++E
Sbjct: 61 WDVSVAGHIASGELPLSAVIRETQEEIGLSISAIDLEYLGIWEDKHSHANG-IIDHEIHH 119
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+++ T + + TLQ+ EV V+++ + K +++ FVP+
Sbjct: 120 LFVTQT--SVAINELTLQKEEVEEVQWLPIDVLKEKISR-FADFVPH 163
>gi|422411750|ref|ZP_16488709.1| MutT/nudix family protein [Listeria innocua FSL S4-378]
gi|313620659|gb|EFR91963.1| MutT/nudix family protein [Listeria innocua FSL S4-378]
Length = 169
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNVERELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE++EELG I+L +F + F F
Sbjct: 61 DLSAAGSALKGETSRQAAEREVKEELGMTIDLSNTRAKFSYHF------------EAGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + L TLQ EV+ V+++A EE + L + F+PY
Sbjct: 109 DYWFIT--KDVELSDLTLQTEEVADVRFVAKEELEAL--RSSGEFIPY 152
>gi|282877170|ref|ZP_06286008.1| peptidase family M49 [Prevotella buccalis ATCC 35310]
gi|281300662|gb|EFA92993.1| peptidase family M49 [Prevotella buccalis ATCC 35310]
Length = 657
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 164/394 (41%), Gaps = 62/394 (15%)
Query: 396 VPYSEE--YNSYLTRASELLHKAGDMASSPSLKRLL------HSKADAFLSNNYYDSDIA 447
+PY+ Y L R L KA + A + K ++ + D L + Y I
Sbjct: 215 IPYTTNCLYQKELKRIVYWLGKAREFAENEQQKMIISLLIRYYETGDLKLFDEY---SIE 271
Query: 448 WI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLP 506
W+ E D ++D G E Y D + G K ++E + +D +AT + +L N Q E + P
Sbjct: 272 WLKEQDGQVDFINGFIEVYGDPL-GLKGSWEGLVEYKDLEATKRTQLISKNAQWFEDHSP 330
Query: 507 MDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA 566
++ +K + V VI GD + NLPN E I G+ V + N++EA
Sbjct: 331 VEKRFKKEKVKGVTAHVICAAMLGGDEYPSSAIGINLPNAEWIRARYGSKSVTIGNLTEA 390
Query: 567 KFKNILRPIA---DVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQS 619
+ ++ R + I E L++ H HEC HG G LP
Sbjct: 391 -YNHVARGNGLHEEFVIDDETLGLINRYGDLCDDLHTDLHECLGHGSGR---LLP----V 442
Query: 620 TVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCF--RSV 674
L +EEA+AD+ GL+ A + LI L+P + KS Y +++ + V
Sbjct: 443 VAGDALGAYGDTIEEARADLFGLYYIADEKLIELGLMPNADAYKSQYYTYMMNGLLTQMV 502
Query: 675 RFG----LEESHGKGQALQFNWLFEKEAFILHSDDTFSV-------------------DF 711
R +EE+H + +AL W+ + H+D ++ D+
Sbjct: 503 RIKEGHQIEEAHMRNRALIARWV------LAHADGEVAIIEKQGVAEDGAVRHFVQINDY 556
Query: 712 DKVEGAVESLSTEILTIQARGDKEAASLLLQKYC 745
K+ L EI I++ GD EAA ++++Y
Sbjct: 557 QKLRQLFAKLLAEIQRIKSEGDFEAARAIVERYA 590
>gi|323345244|ref|ZP_08085467.1| M49 family peptidase [Prevotella oralis ATCC 33269]
gi|323093358|gb|EFZ35936.1| M49 family peptidase [Prevotella oralis ATCC 33269]
Length = 648
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 128/556 (23%), Positives = 220/556 (39%), Gaps = 97/556 (17%)
Query: 241 EIFYLQVWYSNPVLRDW-----LKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTA 295
E++ ++W+SN + + L E + D LK + S W L E +
Sbjct: 85 EVYLKRLWFSNGIYHHYGYEKFLPEFSPHFFKDILKQV------SSWLPLSEEQTVDELC 138
Query: 296 DSAVKLLPDAT---KPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQ 352
+ ++ DAT K VN AS + K NFY + + E E + +++ +
Sbjct: 139 EDIFPVIFDATVLPKRVNK------NASEDIVKTSACNFYD-HVSQQEVETFYAAMKDAT 191
Query: 353 QEDATSFFTVIKRRSEFNLDSSL--SGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRAS 410
E+ S+ L+S L G I+ + S+Y P + +L +A
Sbjct: 192 DEEPPSY----------GLNSKLIKKGGILTEDRWTTESLY----APAIRQIVYWLNKAK 237
Query: 411 ELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWI-ELDSELDVTIGPYETYEDAI 469
+ + L + + D + N Y I W+ E + +D G E Y D +
Sbjct: 238 DYAENKHQIKVIDLLIKYYRT-GDLRVFNTY---SIEWLKEKEGNVDFVNGFIEVYGDPL 293
Query: 470 FGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYN 529
G K ++E + +D +AT + + N Q E + P+D +K + V V+
Sbjct: 294 -GIKGSWEGIVEFKDLEATKRTNIISSNAQWFEDHSPVDRRFKKQIVRGVTANVVCAAML 352
Query: 530 SGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA-------------------KFKN 570
GD + NLPN + I G+ V + N+ EA +N
Sbjct: 353 GGDEYPSSAIGINLPNADWIRAKYGSKSVTIANLIEAYNHAARGNGFYEEFVVDDDTLQN 412
Query: 571 ILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHS 630
I + D+C DS H HEC +G S L G S L
Sbjct: 413 IDK-YGDIC-----------DSL--HTDLHEC---LGHGSGQLLSGVDSNA---LGAYGD 452
Query: 631 AMEEAKADIVGLWAL--KFLIGRDLLPK-SLVKSMYVSFLAGCFRS----VRFG--LEES 681
+EEA+AD+ GL+ + + ++ +LLP KS Y +++ + ++FG +EE+
Sbjct: 453 IIEEARADLFGLYYIADEKMVQLELLPNMEAYKSQYYTYMMNGLMTQQVRIKFGAQIEEA 512
Query: 682 HGKGQALQFNWLFEKEA----FILHSDDTF--SVDFDKVEGAVESLSTEILTIQARGDKE 735
H + +AL NW+ E ++ T+ D+ + L EI I++ GD
Sbjct: 513 HMRNRALISNWVMEHACGAVEWVKRDRHTYIKVKDYVVLRNLFARLLAEIQRIKSEGDYI 572
Query: 736 AASLLLQKYCTMTQPL 751
A L+++Y + P+
Sbjct: 573 EAKNLVERYGVILDPV 588
>gi|225869568|ref|YP_002745515.1| NUDIX hydrolase [Streptococcus equi subsp. equi 4047]
gi|225698972|emb|CAW92027.1| putative NUDIX hydrolase [Streptococcus equi subsp. equi 4047]
Length = 174
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ D+ TM KTG R G YH V+A +F + + L+ QR+ D K+ WP W
Sbjct: 3 EYWDIYTMNRLKTGRLMERGAAFVEGAYHLVVHACVFNDKGEMLIQQRQKD-KEGWPSYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQQNVINDGKFINNEFA 126
DI+ G AG++S + REL+EELG+ L F TF +N F
Sbjct: 62 DITVGGSALAGETSQEAVMRELKEELGLTLDLAGVRPHFSITF------------DNGFD 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D +L+ L + + LQ EV AV++ + +E ++ D F+PY
Sbjct: 110 DTFLI--LQAVDVRKLVLQTEEVQAVRWASRDEILAMI--DAGIFIPY 153
>gi|116619518|ref|YP_821674.1| dipeptidyl-peptidase III [Candidatus Solibacter usitatus Ellin6076]
gi|116222680|gb|ABJ81389.1| putative dipeptidyl-peptidase III [Candidatus Solibacter usitatus
Ellin6076]
Length = 668
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 156/381 (40%), Gaps = 48/381 (12%)
Query: 401 EYNSYLTRASELLHKA---GDMASSPSLKRLL-HSKADAFLSNNYYDSDIAWIELDSELD 456
Y +L +A E L A + + +L L+ + + AF +++ D AW++ + +D
Sbjct: 244 RYAPFLKKAVEYLEHARAYAEPGQATALAALIRYYQTGAF--SDFLAFDAAWVQSNPRVD 301
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
G E Y DA K T ++F+ I D+K + N Q E P YK + V
Sbjct: 302 FVNGFIEVYRDA-RAAKGTSQSFVSITDEKMNQLMLKLAANAQYFEDRAPWAQQYKKQGV 360
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNI----- 571
A + + + +GD T+ NLPN+ +I + G+ +L S +
Sbjct: 361 KAPMAKACETLIETGDFH-IGTIGDNLPNENQIREQYGSKSFLLTGSSRTLRQGTGFGAV 419
Query: 572 ----LRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQ 626
P +K +E D HE HG G S L G ++ L+
Sbjct: 420 DEFSASPEEIAVSKKYGEEASDL-----MTALHEIIGHGSGKLSPKLKGGSEAA----LK 470
Query: 627 ELHSAMEEAKADIVGLWALKFLIGRDLLPKS---LVKSMYVSFLAGCFRSVRFGL----- 678
E S +EEA+AD++ LW + R+L S + K+MY G R+V L
Sbjct: 471 EYFSTLEEARADLMALWNISDPKLRELGLVSSPEVTKAMYY----GAVRTVLTQLMRIPE 526
Query: 679 ----EESHGKGQALQFNWLFEKEAFILHSDDTFSV-----DFDKVEGAVESLSTEILTIQ 729
EE H + + L N++ +K I + D +++ V L +E++ I+
Sbjct: 527 GDTIEEDHQRNRQLIVNYIMDKTGAIQKVERNGKTYLELKDVPRMKEGVGMLLSELMRIK 586
Query: 730 ARGDKEAASLLLQKYCTMTQP 750
A GD A L+ KY P
Sbjct: 587 AEGDYAAIKALVDKYGVHFDP 607
>gi|334136900|ref|ZP_08510351.1| hydrolase, NUDIX family [Paenibacillus sp. HGF7]
gi|333605533|gb|EGL16896.1| hydrolase, NUDIX family [Paenibacillus sp. HGF7]
Length = 220
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 8/148 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF-AESTQELLL-QRRADFKDSWPG 66
E D+ + G T R EVH G +H+T + W+ E + ++L Q R+ KD++P
Sbjct: 4 EMFDIYDEDANRIG-TASREEVHTAGYWHQTFHCWLVRPEGNRRMVLFQLRSSSKDTFPD 62
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL--QQNVINDGKFINNE 124
+DI++AGH+++G+ ++ A RELQEELG+ +P + +FT ++ + FI+ E
Sbjct: 63 RFDITAAGHLTSGE-TIQGASRELQEELGLCVPFERLSLLFTVRTDERGTVRGRTFIDRE 121
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAV 152
+ V+ + PL+A+TLQ+ EVS +
Sbjct: 122 ISHVFGYAS--DWPLDAYTLQEEEVSGL 147
>gi|386052644|ref|YP_005970202.1| MutT/nudix family protein [Listeria monocytogenes Finland 1998]
gi|346645295|gb|AEO37920.1| MutT/nudix family protein [Listeria monocytogenes Finland 1998]
Length = 169
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H ++ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVIHVCIFNEKGQ-LLIQKRQKEKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ F D
Sbjct: 61 DLSAAGSALKGETSQQAAEREVQEELGIMIDLSGTRAKFSY----------HFEEGFDDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+ +T + L TLQ+ EV+ +++ EE + L + F+PY QLFN+
Sbjct: 111 WFIT--KDVQLSDLTLQKEEVADARFVTKEELEAL--RSSGEFIPYFF---LNQLFNL 161
>gi|308067350|ref|YP_003868955.1| Nudix hydrolase [Paenibacillus polymyxa E681]
gi|305856629|gb|ADM68417.1| Putative Nudix hydrolase [Paenibacillus polymyxa E681]
Length = 210
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAEST--QELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
T R + H G +H T + W+ +++ + LL Q+R D KD++PG +DI++AGH++AG+
Sbjct: 18 TASRQDAHVKGYWHHTFHCWLARDTSIGRRLLFQQRQDTKDTFPGCYDITAAGHLTAGE- 76
Query: 82 SLISAQRELQEELGINLPKDAFEFVFT--FLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
+ A REL+EELGI++P + + T + + F + E + V+ + L+ PL
Sbjct: 77 DMSQAARELEEELGIHVPFASLTPLMTVRYESKGTAQGTSFWDREVSSVFGL--LSNQPL 134
Query: 140 EAFTLQQTEVSAV 152
EA+ LQQ EV+ +
Sbjct: 135 EAYHLQQEEVAGL 147
>gi|381188645|ref|ZP_09896205.1| dipeptidyl-peptidase III [Flavobacterium frigoris PS1]
gi|379649283|gb|EIA07858.1| dipeptidyl-peptidase III [Flavobacterium frigoris PS1]
Length = 678
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 38/330 (11%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D +IAW+ + +D E Y D + GY+ ++E + I+D + ++++ N Q
Sbjct: 288 DYNIAWLAATEGNIDYINSFIEVYNDPL-GYRGSYEGIVQIKDFDMSKKMEVVSGNAQWF 346
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V+ + + + SGD + NLPN + I G+ V L
Sbjct: 347 EDNSPLMPQHKKKNVVGVSYKTVIVAGESGDASPSTPIGVNLPNADWIRAGHGSKSVSLG 406
Query: 562 NV----SEAKFKNILRPIAD----VCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ S+A K L+ A+ V + ++ E+ D H H + H+
Sbjct: 407 NIIDSYSKAGGKGKLQEFANDEEEVALAEQYGEIGD--------KLHTALHEVVGHASGQ 458
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWAL-----KFLIGRDLLPKSLVKSMYVSFLA 668
+ T + L+ S +EE +AD+VGL+ L + L D K+ ++S Y S++
Sbjct: 459 INPGVGTPKETLKSYASTLEEGRADLVGLYYLYNPKIQELGLVDDWKKTGMES-YDSYIR 517
Query: 669 GCFRSVRFGL------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKV 714
+ F L EE+H + + W FEK E + F++ +++K+
Sbjct: 518 NGLMTQLFRLELGANIEEAHMRNRQWVSAWAFEKGLKDNVIEKVNRNGKTYFNITNYEKL 577
Query: 715 EGAVESLSTEILTIQARGDKEAASLLLQKY 744
L E+ I++ GD E+ L++ Y
Sbjct: 578 HDLFGELLREVQRIKSEGDYESGKALVENY 607
>gi|16802413|ref|NP_463898.1| hypothetical protein lmo0368 [Listeria monocytogenes EGD-e]
gi|255018161|ref|ZP_05290287.1| hypothetical protein LmonF_11401 [Listeria monocytogenes FSL
F2-515]
gi|386042707|ref|YP_005961512.1| hypothetical protein [Listeria monocytogenes 10403S]
gi|386049296|ref|YP_005967287.1| MutT/nudix family protein [Listeria monocytogenes FSL R2-561]
gi|404282800|ref|YP_006683697.1| MutT/nudix family protein [Listeria monocytogenes SLCC2372]
gi|404409609|ref|YP_006695197.1| MutT/nudix family protein [Listeria monocytogenes SLCC5850]
gi|404412461|ref|YP_006698048.1| MutT/nudix family protein [Listeria monocytogenes SLCC7179]
gi|405757355|ref|YP_006686631.1| MutT/nudix family protein [Listeria monocytogenes SLCC2479]
gi|27734607|sp|Q8Y9Z9.1|Y368_LISMO RecName: Full=Uncharacterized Nudix hydrolase lmo0368
gi|16409746|emb|CAC98447.1| lmo0368 [Listeria monocytogenes EGD-e]
gi|345535941|gb|AEO05381.1| hypothetical protein LMRG_00060 [Listeria monocytogenes 10403S]
gi|346423142|gb|AEO24667.1| MutT/nudix family protein [Listeria monocytogenes FSL R2-561]
gi|404229435|emb|CBY50839.1| MutT/nudix family protein [Listeria monocytogenes SLCC5850]
gi|404232302|emb|CBY53705.1| MutT/nudix family protein [Listeria monocytogenes SLCC2372]
gi|404235237|emb|CBY56639.1| MutT/nudix family protein [Listeria monocytogenes SLCC2479]
gi|404238160|emb|CBY59561.1| MutT/nudix family protein [Listeria monocytogenes SLCC7179]
Length = 169
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H ++ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVIHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ F D
Sbjct: 61 DLSAAGSALKGETSQQAAEREVQEELGIMIDLSGTRAKFSY----------HFEEGFDDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+ +T + L TLQ+ EV+ +++ EE + L + F+PY QLFN+
Sbjct: 111 WFIT--KDVQLSDLTLQKEEVADARFVTKEELEAL--RSSGEFIPYFF---LNQLFNL 161
>gi|346224594|ref|ZP_08845736.1| putative dipeptidyl-peptidase III [Anaerophaga thermohalophila DSM
12881]
Length = 652
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 155/330 (46%), Gaps = 36/330 (10%)
Query: 441 YYDSDIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQ 499
+ D +IAW+ + +S +D G ETY D + G KA++E+ + ++ +A+ + ++ + +
Sbjct: 266 FNDYNIAWLKDNESRIDFINGFIETYGDPL-GIKASWESVVNFKNIEASRRTEIISAHAR 324
Query: 500 VLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVM 559
E + P D +K K++ +VI + GD + NLPN + + K+ G+ V
Sbjct: 325 WFEDHSPTDPRFKKKEIRGVSAKVINVAMLGGDCYPHTPIGINLPNADWLRKEYGSKSVT 384
Query: 560 LKNVS-----EAKFKNILRPIADVCIRKEQQELVDFDSFFTHNI---CHECCHGIGPHSI 611
++N++ AK L C +E+ E + F N+ HEC +G S
Sbjct: 385 IENITYAYDEAAKGTGFLEAF---CYSQEEIERHNKYGFMAGNLHTDLHEC---LGHGSG 438
Query: 612 TLPDGRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLA 668
L +G EL+ + +EE +AD+ L+ A L+ LLP + K+ Y +++
Sbjct: 439 QLLEGVTGD---ELKAYGAVIEETRADLFALYFIADNKLVELGLLPDEEAFKAEYDNYIR 495
Query: 669 GCFRS----VRFG--LEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKV 714
+ ++ G +EE+H + + L +W FEK E + + F++ ++ +
Sbjct: 496 NGLLTQITRIQPGDNIEEAHMRNRQLIASWCFEKGKADNVIERKVKNGKTYFTINNYQAL 555
Query: 715 EGAVESLSTEILTIQARGDKEAASLLLQKY 744
L EI +++ GD E A L++ Y
Sbjct: 556 RELFAQLLAEIQRVKSEGDFETARQLVENY 585
>gi|294673708|ref|YP_003574324.1| M49 family peptidase [Prevotella ruminicola 23]
gi|294471733|gb|ADE81122.1| peptidase, M49 (dipeptidyl-peptidase III) family [Prevotella
ruminicola 23]
Length = 649
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 66/375 (17%)
Query: 413 LHKAGDMA------SSPSLKRLLHSKADAFLSNNYYDSDIAWIE-LDSELDVTIGPYETY 465
L KA D+A SS +L + + D N+Y I W++ +S++D G E Y
Sbjct: 234 LRKAYDVAENDKQKSSITLLIMYYLTGDLQFFNHYC---IEWLQDKESKIDFINGFIEVY 290
Query: 466 EDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQ 525
D + G K ++E + D++AT + + N Q E + P+D+ ++ V VI
Sbjct: 291 GDPL-GLKGSWEGLVEYIDEEATHRTQTISQNAQWFEDHSPVDSRFRKPVVKGVSANVIC 349
Query: 526 LIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK---------------- 569
GD + NLPN + I G+ + + N+++A K
Sbjct: 350 AAMLGGDEYPATAIGINLPNADWIRAAYGSKSITISNITDAYNKASKGSGFKEEFVSDEE 409
Query: 570 --NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITL-PDGRQSTVRLEL 625
+++ DVC D H HEC HG G + PD L
Sbjct: 410 TLHLIEKYGDVC-----------DDL--HTDLHECLGHGSGQLLPGVDPDA--------L 448
Query: 626 QELHSAMEEAKADIVGLW--ALKFLIGRDLLP-KSLVKSMYVSFLAGCFRS--VRFG--- 677
+ S +EEA+AD+ GL+ A K L+ L+P + KS Y +++ + +R
Sbjct: 449 KAYSSTIEEARADLFGLYYIADKKLVELGLVPDEEAYKSQYYTYMMNGLMTQLIRITPGN 508
Query: 678 -LEESHGKGQALQFNWLFEKE---AFILHSDDTFS--VDFDKVEGAVESLSTEILTIQAR 731
LEE+H + +AL +W +E + T+ D+ ++ + L EI I++
Sbjct: 509 QLEEAHMRNRALIAHWCYENGDVIKLVKREGKTYVEISDYAELRSLIARLLAEIQRIKSE 568
Query: 732 GDKEAASLLLQKYCT 746
GD EAA L+++Y
Sbjct: 569 GDYEAARDLVERYAV 583
>gi|225867699|ref|YP_002743647.1| NUDIX hydrolase [Streptococcus equi subsp. zooepidemicus]
gi|225700975|emb|CAW97706.1| putative NUDIX hydrolase [Streptococcus equi subsp. zooepidemicus]
Length = 174
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ D+ TM KTG R G YH V+A +F + + L+ QR+ D K+ WP W
Sbjct: 3 EYWDIYTMNRLKTGRLMERGAAFVEGAYHLVVHACVFNDKGEMLIQQRQKD-KEGWPSYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQQNVINDGKFINNEFA 126
DI+ G AG++S + REL+EELG+ L F TF +N F
Sbjct: 62 DITVGGSALAGETSQEAVMRELKEELGLALDLAGVRPHFSITF------------DNGFD 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D +LV L + + LQ EV AV++ + +E ++ D F+PY
Sbjct: 110 DTFLV--LQAVDVTKLVLQTEEVQAVRWASRDEILAMI--DAGIFIPY 153
>gi|359407048|ref|ZP_09199684.1| peptidase, M49 family [Prevotella stercorea DSM 18206]
gi|357553796|gb|EHJ35534.1| peptidase, M49 family [Prevotella stercorea DSM 18206]
Length = 640
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 161/374 (43%), Gaps = 33/374 (8%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y + + L KA ++A + +++ D + + + D I W+ E + +D
Sbjct: 214 YGEAIKHITYWLEKASEVAENELQTKIIGMLVDYYRTGDLSKFDAYSIEWLKEHEGRIDF 273
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G KA++E + +D AT + + N Q E + P+D ++ V+
Sbjct: 274 INGFIEVYGDPL-GMKASWEGIVTYKDLVATQRTQTISKNAQWFEDHSPVDPRFRKSQVV 332
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE-----AKFKNIL 572
V+ GD + NLPN + I G+ + + N++ AK L
Sbjct: 333 GVTANVVCSAMLGGDEYPSTAIGINLPNADWIRAQYGSKSITIGNLTHAYNQAAKGNGFL 392
Query: 573 RP-IADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSA 631
+ +AD R ++ D H HEC +G S L G + L S
Sbjct: 393 QEFVADEATRAMIEKYGDVCDDL-HTDLHEC---LGHGSGQLLAGVSADA---LGSYGST 445
Query: 632 MEEAKADIVGLW--ALKFLIGRDLLPKS-LVKSMYVSFLAGCFRS----VRFG--LEESH 682
+EEA+AD+ GL+ A L+ L+P + KS Y +++ + ++ G +EE+H
Sbjct: 446 IEEARADLFGLYYIADAKLVELGLVPDAEAYKSQYYTYMMNGLLTQLTRIQPGNEIEEAH 505
Query: 683 GKGQALQFNWLFEKE----AFILHSDDTF--SVDFDKVEGAVESLSTEILTIQARGDKEA 736
+ +AL W + + H + T+ D++ + A L EI I++ GD EA
Sbjct: 506 MRNRALIARWTLKHYPSAVRLVKHDEKTYVEVSDYEMLREAFAKLLAEIQRIKSEGDFEA 565
Query: 737 ASLLLQKYCTMTQP 750
A L++ Y +P
Sbjct: 566 AKQLVEHYAIHVEP 579
>gi|47091503|ref|ZP_00229300.1| MutT/nudix family protein [Listeria monocytogenes str. 4b H7858]
gi|254825826|ref|ZP_05230827.1| MutT/nudix family protein [Listeria monocytogenes FSL J1-194]
gi|255520966|ref|ZP_05388203.1| MutT/nudix family protein [Listeria monocytogenes FSL J1-175]
gi|417314409|ref|ZP_12101108.1| MutT/nudix family protein [Listeria monocytogenes J1816]
gi|47020180|gb|EAL10916.1| MutT/nudix family protein [Listeria monocytogenes str. 4b H7858]
gi|293595065|gb|EFG02826.1| MutT/nudix family protein [Listeria monocytogenes FSL J1-194]
gi|328467655|gb|EGF38707.1| MutT/nudix family protein [Listeria monocytogenes J1816]
Length = 169
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+ L TLQ+ EV+ +++ EE + L + F+PY QLFN+
Sbjct: 117 --------VELSDLTLQKEEVADARFVTKEELEVL--RSSGEFIPYFF---LNQLFNL 161
>gi|307565657|ref|ZP_07628131.1| peptidase family M49 [Prevotella amnii CRIS 21A-A]
gi|307345633|gb|EFN90996.1| peptidase family M49 [Prevotella amnii CRIS 21A-A]
Length = 658
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 48/365 (13%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E + ++D G E Y D + G KA++E + +D +AT + + N Q E +
Sbjct: 277 IEWLKEKEGQIDFINGFIEVYSDPL-GLKASWEGIVEYKDLEATKRANIISTNAQWFEDH 335
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++ + V V+ GD + NLPN + I + G+ V + N++
Sbjct: 336 SPIDPRFRKETVKGVTANVVNAAMLGGDEYPSTAIGINLPNADWIRSEYGSKSVTIGNLT 395
Query: 565 EAKFKNILRP----IADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDG 616
A NI + I KE EL++ T H HEC HG G LP
Sbjct: 396 HA--YNIASKGNGFYEEFVIDKETYELINMFGSKTDDLHTDLHECLGHGSGK---LLP-- 448
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLP-KSLVKSMYVSFLAGCF-- 671
ST L+ + +EEA+AD+ GL+ + K L+ LL K K+ Y S+L
Sbjct: 449 --STDPSSLKNYGNTIEEARADLFGLYYIADKKLLELGLLDNKDAYKAHYYSYLMNGLLT 506
Query: 672 RSVRF----GLEESHGKGQALQFNWLF----EKEA--FILHSDDTFSV--DFDKVEGAVE 719
+ VR +EE+H + +AL W E+E FI + T+ ++ +
Sbjct: 507 QQVRIKPGKKIEEAHMQNRALIAWWAMDLGKEEEVIEFISKNSKTYIRINNYTTLRSIFA 566
Query: 720 SLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQV-----PVDIAPTFTAV 774
EI I++ GD AA L++KY + L K ++ +V ++IAP +
Sbjct: 567 KQLAEIQRIKSEGDFNAARTLVEKYA-------INLNKKQHEEVLKRYEQLNIAPYKGFI 619
Query: 775 NKLLQ 779
N +L+
Sbjct: 620 NPVLR 624
>gi|317127740|ref|YP_004094022.1| NUDIX hydrolase [Bacillus cellulosilyticus DSM 2522]
gi|315472688|gb|ADU29291.1| NUDIX hydrolase [Bacillus cellulosilyticus DSM 2522]
Length = 173
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
DV TG T R E YH V+ +F E+ E+L+Q+R FK WP MWDIS
Sbjct: 5 DVYDKNRNITGKTMKRGEPFEKEAYHLVVHVCLFNEN-DEMLIQQRHPFKKGWPNMWDIS 63
Query: 72 SAGHISAGDSSLISAQRELQEELG--INL----PKDAFEFVFTFLQQNVINDGKFINNEF 125
G AGD+S +A+RE+ EELG INL P F F F
Sbjct: 64 VGGSAVAGDTSQQAAEREVLEELGYKINLRNVRPSLTINFEFGF---------------- 107
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D Y + +N +P+ TLQ EV VK+ EE +++ ++ F+PY
Sbjct: 108 -DDYFLVDVN-LPISELTLQPEEVQRVKWATKEEIMSMI--EEGIFIPY 152
>gi|288556269|ref|YP_003428204.1| hypothetical protein BpOF4_16335 [Bacillus pseudofirmus OF4]
gi|288547429|gb|ADC51312.1| hypothetical protein BpOF4_16335 [Bacillus pseudofirmus OF4]
Length = 208
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPG 66
EH+ ++ + GI R+++H+ G +H T + W+ + LQRR+D+K +P
Sbjct: 4 EHITIVNEQRKPVGIA-SRADIHKKGLWHETFHCWMAGRDGDHYYIYLQRRSDYKKDFPS 62
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
++DI++AGHISA + ++ RE+ EELGI L D + + ++ I FI+ EFA
Sbjct: 63 LFDITAAGHISA-NETIEDGVREVHEELGIELTMD--RLISLGVIKDCIISEPFIDREFA 119
Query: 127 DVYL-VTTLNPIPLEAFTLQQTEVSAVKYIAY 157
V+L + N + FTLQQ EVS + A+
Sbjct: 120 HVHLYILKTN----DHFTLQQEEVSEIVKAAF 147
>gi|317503126|ref|ZP_07961197.1| M49 family peptidase [Prevotella salivae DSM 15606]
gi|315665757|gb|EFV05353.1| M49 family peptidase [Prevotella salivae DSM 15606]
Length = 644
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 42/352 (11%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+E DS +D G E Y D + G K ++E + +D +AT + +L ++ Q E +
Sbjct: 266 IKWLEDQDSRVDFINGFIEVYGDPL-GLKGSWEGIVHYKDIEATKRTRLISEHAQWFEDH 324
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D A+K K V V+ GD + NLPN + I + G+ V + N++
Sbjct: 325 SPVDKAFKKKAVRGVTANVVCAAMLGGDEYPSTAIGINLPNADWIRAEYGSKSVTIGNLT 384
Query: 565 EAKFKNILRP------IADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDG 616
+A + L + D R+ ++ + H HEC HG G T PD
Sbjct: 385 DAYQRASLGNGFLQEFVIDDTTRQAIEQYGELCENL-HTDLHECLGHGSGQLLKDTDPDA 443
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS 673
L+ + +EEA+AD+ GL+ L K L+ L P + KS Y +++ +
Sbjct: 444 --------LKSYGNTIEEARADLFGLYYLADKKLVELGLTPNAEAYKSQYYTYMMNGLLT 495
Query: 674 --VRF----GLEESHGKGQALQFNWLF----EKEAFIL--HSDDTFSV--DFDKVEGAVE 719
VR +EE+H + +AL W E +A ++ H+ + D++++
Sbjct: 496 QLVRIKEGDKIEEAHMRNRALIAGWALDMDQEGQAVVIEEHAGKHYVRVKDYERLRALFA 555
Query: 720 SLSTEILTIQARGDKEAASLLLQKYCTMTQPL--KVALQKLENVQVPVDIAP 769
EI I++ GD AA L+++Y K L + E +DIAP
Sbjct: 556 IQLREIQRIKSEGDFVAARRLVEQYAVHVDDALHKEVLSRYEK----LDIAP 603
>gi|284800655|ref|YP_003412520.1| hypothetical protein LM5578_0402 [Listeria monocytogenes 08-5578]
gi|284993841|ref|YP_003415609.1| hypothetical protein LM5923_0401 [Listeria monocytogenes 08-5923]
gi|284056217|gb|ADB67158.1| hypothetical protein LM5578_0402 [Listeria monocytogenes 08-5578]
gi|284059308|gb|ADB70247.1| hypothetical protein LM5923_0401 [Listeria monocytogenes 08-5923]
Length = 169
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H ++ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVIHLCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ F D
Sbjct: 61 DLSAAGSALKGETSQQAAEREVQEELGIMIDLSGTRAKFSY----------HFEEGFDDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+ +T + L TLQ+ EV+ +++ EE + L + F+PY QLFN+
Sbjct: 111 WFIT--KDVQLSDLTLQKEEVADARFVTKEELEAL--RSSGEFIPYFF---LNQLFNL 161
>gi|302346607|ref|YP_003814905.1| peptidase, M49 family [Prevotella melaninogenica ATCC 25845]
gi|302151030|gb|ADK97291.1| peptidase, M49 family [Prevotella melaninogenica ATCC 25845]
Length = 620
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 157/375 (41%), Gaps = 62/375 (16%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E + +D G E Y D + G K ++E + +D +AT + + N Q E +
Sbjct: 233 IEWLREQEGRIDFINGFIEVYGDPM-GLKGSWEGIVEYKDLEATHRTQAISANAQWFEDH 291
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++ V VI GD + NLPN + I + G+ V + N++
Sbjct: 292 SPVDPQFRKAIVKGVTANVICAAMLGGDEYPASAIGINLPNADWIRTEHGSKSVTISNLT 351
Query: 565 EA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNI---CHECC-HGIG---PH 609
A F+ AD C +L+D + T N+ HEC HG G P
Sbjct: 352 HAYDMAAKDNGFREEFVIDADTC------KLLDLYADKTDNLHTDLHECLGHGSGRLLPG 405
Query: 610 SITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSF 666
T PD L+ + +EEA+AD+ GL+ + K L L K K+ Y S+
Sbjct: 406 --TDPDA--------LKNYGNTIEEARADLFGLYYIADQKLLELGLLDSKEAYKAQYYSY 455
Query: 667 LAGCF--RSVRFG----LEESHGKGQALQFNWLFEKEA------FILHSDDTFSV----- 709
+ + VR +EESH + +AL W E I D T S
Sbjct: 456 MMNGLLTQQVRIKPGKQIEESHMQNRALIAQWAMELGKANNVVELITCEDKTTSESKTYV 515
Query: 710 ---DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVA--LQKLENVQVP 764
D+D + EI I++ GD EAA L++KY P+ A L++ E
Sbjct: 516 RINDYDALRNIFAYQLAEIQRIKSEGDFEAARTLVEKYAINLDPVLHAEVLRRYEG---- 571
Query: 765 VDIAPTFTAVNKLLQ 779
++IAP +N +L+
Sbjct: 572 LNIAPYKGFINPILK 586
>gi|290892478|ref|ZP_06555472.1| MutT/nudix family protein [Listeria monocytogenes FSL J2-071]
gi|404406833|ref|YP_006689548.1| MutT/nudix family protein [Listeria monocytogenes SLCC2376]
gi|290558044|gb|EFD91564.1| MutT/nudix family protein [Listeria monocytogenes FSL J2-071]
gi|404240982|emb|CBY62382.1| MutT/nudix family protein [Listeria monocytogenes SLCC2376]
Length = 169
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ F D
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSY----------HFEAGFDDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ VT + L TLQ+ EV+ +++ EE + L + F+PY
Sbjct: 111 WFVT--KDVELSDLTLQKEEVADARFVTKEELEAL--RSSGEFIPY 152
>gi|429726456|ref|ZP_19261253.1| peptidase family M49 [Prevotella sp. oral taxon 473 str. F0040]
gi|429146532|gb|EKX89584.1| peptidase family M49 [Prevotella sp. oral taxon 473 str. F0040]
Length = 675
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 42/330 (12%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ + +S +D G ETY D + G KA++E+ + +D AT + N Q E +
Sbjct: 285 IQWLKDTESLVDFVNGFTETYGDPL-GMKASWESIVNFKDIAATERAHQLAVNAQWFENH 343
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D+ +K K+V +VI +GD+ + NLPN + + +D G+ V + N++
Sbjct: 344 SPVDSRFKKKEVKGISAKVITAAILAGDLYPSTAIGINLPNSDWVRRDFGSKSVTISNLT 403
Query: 565 EAKFKNILRPIAD---VCIRKEQQELVDFDSFF--THNICHECC-HGIGPHSITLPDGRQ 618
A K D + +Q ++ + H HEC HG G LP
Sbjct: 404 SAYAKAAHGSGMDKEFIIDEPTRQLILKYGDRCDDLHTDLHECLGHGSGQ---LLP---- 456
Query: 619 STVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSM------YVSFL--AGC 670
T L+ S +EEA+AD L+AL +L L+ L +M Y S++
Sbjct: 457 GTDPDSLKSYGSTIEEARAD---LFALYYLADPKLVELGLTPNMDAHKASYYSYIQNGAL 513
Query: 671 FRSVRFG----LEESHGKGQALQFNWLFEKEA----------FILHSDDTFSV--DFDKV 714
+ VR +EE+H + +AL +W+ E+ + TF D+ ++
Sbjct: 514 TQLVRIKPGNTIEEAHMRNRALIAHWVLEQAKSQKTAKPCVELVKQKGKTFVRVNDYAEM 573
Query: 715 EGAVESLSTEILTIQARGDKEAASLLLQKY 744
+L EI I++ GD E A L++ Y
Sbjct: 574 RHLFGTLLAEIQRIKSEGDYEGARKLVETY 603
>gi|226222995|ref|YP_002757102.1| different proteins [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|386731128|ref|YP_006204624.1| hypothetical protein MUO_02015 [Listeria monocytogenes 07PF0776]
gi|406703143|ref|YP_006753497.1| MutT/nudix family protein [Listeria monocytogenes L312]
gi|225875457|emb|CAS04154.1| Putative different proteins [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|384389886|gb|AFH78956.1| hypothetical protein MUO_02015 [Listeria monocytogenes 07PF0776]
gi|406360173|emb|CBY66446.1| MutT/nudix family protein [Listeria monocytogenes L312]
Length = 169
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ L TLQ+ EV+ +++ EE + L + F+PY
Sbjct: 117 --------VELSDLTLQKEEVADARFVTKEELEAL--RSSGEFIPY 152
>gi|298372112|ref|ZP_06982102.1| peptidase, M49 family [Bacteroidetes oral taxon 274 str. F0058]
gi|298275016|gb|EFI16567.1| peptidase, M49 family [Bacteroidetes oral taxon 274 str. F0058]
Length = 681
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 36/371 (9%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y++ L + L KA +A + + K + + S + D D I W+ + S++DV
Sbjct: 252 YSTALEKVVYWLQKAAAVAENKAQKAAIDKLIQFYKSGSLKDFDAYSILWVNDTASQIDV 311
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E+Y D + G KA++E+ + ++ +AT + ++ N Q E+N P ++ +K +V
Sbjct: 312 VNGFIESYGDPL-GMKASWESLVNFKNMEATKRTEIISANAQWFERNSPAEDRFKKDNVK 370
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP--- 574
+VI +GD + NLPN I + G+ V ++N++EA + + +
Sbjct: 371 GITAKVITAAILAGDCYPTTPIGINLPNSNWIRAEHGSKSVTIENLTEA-YSQVAKGNGF 429
Query: 575 IADVCIRKEQQELVDFDSFFTHNI---CHECCHGIGPHSITLPDGRQSTVRLELQELHSA 631
+ + ELV+ S T N+ HEC +G S L G L+ S
Sbjct: 430 AEEFYWSPAEVELVNKYSNLTSNLHTDLHEC---LGHASGKLLPGVDPDA---LKAYGST 483
Query: 632 MEEAKADIVGLWAL--KFLIGRDLLPKS-LVKSMYVSFLAGCFRS--VRF----GLEESH 682
+EE +AD+ L+ + + ++ LLP + K+ Y ++L + R +EE+H
Sbjct: 484 IEEGRADLFALYFMGDRKMVELGLLPDTNAYKAEYYTYLTNGLLTQLTRIVPGNNIEEAH 543
Query: 683 GKGQALQFNWLFEK----EAFILHSDDTFSV-----DFDKVEGAVESLSTEILTIQARGD 733
+ + + W+ E+ +A + D + D+ K++ L + I++ GD
Sbjct: 544 MRNRQMIARWVLERSKDDKAVEMVERDGGKMFVKVNDYKKIKQHFGELLALVQLIKSTGD 603
Query: 734 KEAASLLLQKY 744
AA L++ Y
Sbjct: 604 YRAAHDLVENY 614
>gi|445115695|ref|ZP_21378309.1| hypothetical protein HMPREF0662_01366 [Prevotella nigrescens F0103]
gi|444840302|gb|ELX67337.1| hypothetical protein HMPREF0662_01366 [Prevotella nigrescens F0103]
Length = 672
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 196/468 (41%), Gaps = 63/468 (13%)
Query: 353 QEDATSFFTVIKRRSE-----FNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLT 407
QE+ F+ K ++E F L+S+L H N ++ L + Y +
Sbjct: 185 QEEVERFYANKKEKAEDKRLSFGLNSTLVKH----DNKLEEIVWKL-----NGRYGKTIK 235
Query: 408 RASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYE 463
+ L+KA + K ++ ++S + D D I W+ E + ++D G E
Sbjct: 236 QIVYWLNKAITYCENNDQKEIIRLLIAYYISGDLADFDKYSIKWVTECNGQIDFINGFIE 295
Query: 464 TYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRV 523
Y DA+ G K ++E + +D +AT + ++ N Q E + P+DN +K + V V
Sbjct: 296 VYGDAL-GLKGSWEGIVHYKDLEATRRTQIISANAQWFEDHSPVDNRFKKEVVKGVTANV 354
Query: 524 IQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE-----AKFKNILRP-IAD 577
+ GD + NLPN + I + G+ V + N+++ AK + + D
Sbjct: 355 VCAAMLGGDEYPASAIGINLPNADWIRAEYGSKSVTISNLTQAYNMAAKGNGFIEEFVVD 414
Query: 578 VCIRKEQQELVDFDSFFT---HNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEE 634
IRK L++ T H HEC +G S L G S L+ + +EE
Sbjct: 415 AQIRK----LIEAYGNLTDELHTDLHEC---LGHGSGKLLSGIDSD---SLKNYGNTIEE 464
Query: 635 AKADIVGLWAL--KFLIGRDLL-PKSLVKSMYVSFLAGCFRS--VRFG----LEESHGKG 685
A+AD+ GL+ + K L+ LL + K+ Y +++ + R +EE+H +
Sbjct: 465 ARADLFGLYYIGDKKLLELGLLDSEEAFKAQYYTYIMNGLMTQLARIKPNKQIEEAHMQN 524
Query: 686 QALQFNWLFEKEA------FILHSDDTFSV--------DFDKVEGAVESLSTEILTIQAR 731
+AL W +E F+ DDT D+ + TEI I++
Sbjct: 525 RALIAWWAYEIGKSENVIEFVKLPDDTTKELKTFVRINDYVALRQIFAQQLTEIQRIKST 584
Query: 732 GDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
GD AA L++ Y K ++ +DIAP +N +++
Sbjct: 585 GDFNAARKLVESYAVKVN--KALHNEVLQRYAQLDIAPYKGFINPIMK 630
>gi|160879681|ref|YP_001558649.1| NUDIX hydrolase [Clostridium phytofermentans ISDg]
gi|160428347|gb|ABX41910.1| NUDIX hydrolase [Clostridium phytofermentans ISDg]
Length = 331
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 3 ESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD 62
ES EE+ D+ G R + G+YH V+ IF ELL+Q+R FK
Sbjct: 4 ESERDEEYFDLYDKNRNLLGKKHRRGDKIGDGEYHLVVHVCIFNHKN-ELLIQQRQPFKK 62
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN 122
WP +WD+S G AG+ S +A+RE +EE+G+ + FT +N
Sbjct: 63 GWPNLWDLSVGGAAMAGEDSQRAAERETREEIGLEIDLTNIRPHFT------VN----FE 112
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP-------YD 175
N F D Y +T I +E TLQ EV AVK++ EE L + +P +D
Sbjct: 113 NGFDDYYFITK--DISIEDLTLQPEEVRAVKWVNKEEL--LAMQKSGVMIPFYFLDKIFD 168
Query: 176 VNGGYGQLF 184
+ YG +
Sbjct: 169 IKNAYGSIL 177
>gi|373111486|ref|ZP_09525742.1| hypothetical protein HMPREF9712_03335 [Myroides odoratimimus CCUG
10230]
gi|371640426|gb|EHO06027.1| hypothetical protein HMPREF9712_03335 [Myroides odoratimimus CCUG
10230]
Length = 678
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 36/329 (10%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW++ +D G E Y D + G+K ++E+ + I D + ++ + Q
Sbjct: 288 DYNVAWVKATKGNIDYNSGFIEVYADPL-GHKGSYESVVQINDFDMSKKMAVLSKEAQWF 346
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V + + + SGD + NLPN + I + G+ + L
Sbjct: 347 EDNSPLMAEHKKKNVTGVSYKTVIVASESGDASPSTPIGVNLPNADWIRAEHGSKSISLG 406
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ +A K K + ++ + ++ EL D H H + H+
Sbjct: 407 NIIDAYNHAGGSDKLKEFVHDEEELQLEEKYGELAD--------KLHTALHEVIGHASGQ 458
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLP----KSLVKSMYVSFLAG 669
+ + L+ S +EE +AD+VGL+ L ++L KS+ K+ Y ++
Sbjct: 459 INKGVGQPKETLKSYASTLEEGRADLVGLFYLYNPKLQELGLVDDWKSVGKAAYDGYIRN 518
Query: 670 CFRS--VRF----GLEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVE 715
+ VR +EE+H + + W+FEK E + +++ D+DK+
Sbjct: 519 GLMTQLVRLEPGADIEEAHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYYNITDYDKLH 578
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
L E I++ GD +A L++ Y
Sbjct: 579 DLFGQLLKETQRIKSEGDYKAGQALVETY 607
>gi|334147223|ref|YP_004510152.1| putative dipeptidyl-peptidase III [Porphyromonas gingivalis TDC60]
gi|333804379|dbj|BAK25586.1| putative dipeptidyl-peptidase III [Porphyromonas gingivalis TDC60]
Length = 886
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 197/499 (39%), Gaps = 85/499 (17%)
Query: 325 KPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS---EFNLDSSLSGHIVD 381
K NFY P + + E E +L E E K RS F L++ L
Sbjct: 163 KASSVNFYAPGITRSEAESHYKNLIEALPE---------KERSCPPSFGLNTRLIRSTSG 213
Query: 382 ATNHSVGSIYDLYS-------------VPYSE-EYNSYLTRASELLHKAGDMASSPSLKR 427
V I LYS +PY+E E + R ++ GD+ R
Sbjct: 214 ELKDEVCCIDGLYSPAIEAVVASLEAAIPYTENEEQAACIRLLCDYYRTGDV-------R 266
Query: 428 LLHSKADAFLSNNYYDSDIAWIELD-SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDK 486
L D F I W+E + + +D G E Y D I G ++E + ++D++
Sbjct: 267 LY----DRFC--------IRWVENNRTRIDFINGFTEVYADPI-GIHGSWEGLVHMQDEE 313
Query: 487 ATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPND 546
A + ++ ++ E + P+D ++ K+ V+ ++ +GD + NLPN
Sbjct: 314 AGRRTRIISEHAGWFEAHSPIDARFRKKNPHGISATVVNVLTIAGDSYPATPIGINLPNA 373
Query: 547 ERIVKDRGTSMVMLKNVSEAKFKNILRP-------IADVCIRKEQQELVDF-DSFFTHNI 598
+ I + G+ V + N+++A + + R I D +R+ + D DS H
Sbjct: 374 DWIRAEHGSKSVTIDNITDA-YNHAARGTGLYEEFIPDEEVRRHVELHADLTDSL--HTD 430
Query: 599 CHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLW--------ALKFLI 649
HEC HG G LP L E S +EE +AD+ L+ L L
Sbjct: 431 LHECLGHGSGQ---LLPGVSGDA----LGEHASTLEETRADLFALYFLADPKIIELGLLT 483
Query: 650 GRDLLPKSLVKSMYVSFLAGCFRSVRF-GLEESHGKGQALQFNWLFEKE------AFILH 702
D + K M + R R +EE+H + +AL ++ E + +
Sbjct: 484 DPDAYKANYYKYMLNGLMTQLVRIKRGEEIEEAHMRNRALIARYVLEHAERPGAMSLVCE 543
Query: 703 SDDTFSV--DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLEN 760
T + D++ V + L TE+ I++ GD A L+++Y PL +++
Sbjct: 544 EGKTALMIKDYEAVRAIIAGLLTEVQRIKSEGDYTAGKALVERYAVHVDPL--LHEEVLT 601
Query: 761 VQVPVDIAPTFTAVNKLLQ 779
+DIAP VN L+
Sbjct: 602 RYAKLDIAPYKGFVNPRLR 620
>gi|422408415|ref|ZP_16485376.1| MutT/nudix family protein [Listeria monocytogenes FSL F2-208]
gi|313610890|gb|EFR85851.1| MutT/nudix family protein [Listeria monocytogenes FSL F2-208]
Length = 169
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNADRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ L TLQ+ EV+ ++I EE + L + F+PY
Sbjct: 117 --------VDLSDLTLQKEEVADARFITKEELEVL--RSSGEFIPY 152
>gi|423330160|ref|ZP_17307960.1| hypothetical protein HMPREF9711_03534 [Myroides odoratimimus CCUG
3837]
gi|404602451|gb|EKB02148.1| hypothetical protein HMPREF9711_03534 [Myroides odoratimimus CCUG
3837]
Length = 678
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 36/329 (10%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW++ +D G E Y D + G+K ++E+ + I D + ++ + Q
Sbjct: 288 DYNVAWVKATKGNIDYNSGFIEVYADPL-GHKGSYESVVQINDFDMSKKMAVLSKEAQWF 346
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V + + + SGD + NLPN + I + G+ + L
Sbjct: 347 EDNSPLMAEHKKKNVTGVSYKTVIVASESGDASPSTPIGVNLPNADWIRAEHGSKSISLG 406
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ +A K K + ++ + ++ EL D H HE IG S +
Sbjct: 407 NIIDAYNHAGGSDKLKEFVHDEEELQLEEKYGELAD----KLHTALHEV---IGHASGQI 459
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLP----KSLVKSMYVSFLAG 669
G + L+ S +EE +AD+VGL+ L ++L KS+ K+ Y ++
Sbjct: 460 NKGVGQP-KETLKSYASTLEEGRADLVGLFYLYNPKLQELGLVDDWKSVGKAAYDGYIRN 518
Query: 670 CFRS--VRF----GLEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVE 715
+ VR +EE+H + + W+FEK E + +++ D+DK+
Sbjct: 519 GLMTQLVRLEPGADIEEAHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYYNITDYDKLH 578
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
L E I++ GD +A L++ Y
Sbjct: 579 DLFGQLLKETQRIKSEGDYKAGQALVETY 607
>gi|423135575|ref|ZP_17123221.1| hypothetical protein HMPREF9715_02996 [Myroides odoratimimus CIP
101113]
gi|371640996|gb|EHO06588.1| hypothetical protein HMPREF9715_02996 [Myroides odoratimimus CIP
101113]
Length = 678
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 36/329 (10%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW++ +D G E Y D + G+K ++E+ + I D + ++ + Q
Sbjct: 288 DYNVAWVKATKGNIDYNSGFIEVYADPL-GHKGSYESVVQINDFDMSKKMAVLSKEAQWF 346
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V + + + SGD + NLPN + I + G+ + L
Sbjct: 347 EDNSPLMAEHKKKNVTGVSYKTVIVASESGDASPSTPIGVNLPNADWIRAEHGSKSISLG 406
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ +A K K + ++ + ++ EL D H HE IG S +
Sbjct: 407 NIIDAYNHAGGSDKLKEFVHDEEELQLEEKYGELAD----KLHTALHEV---IGHASGQI 459
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLP----KSLVKSMYVSFLAG 669
G + L+ S +EE +AD+VGL+ L ++L KS+ K+ Y ++
Sbjct: 460 NKGVGQP-KETLKSYASTLEEGRADLVGLFYLYNPKLQELGLVDDWKSVGKAAYDGYIRN 518
Query: 670 CFRS--VRF----GLEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVE 715
+ VR +EE+H + + W+FEK E + +++ D+DK+
Sbjct: 519 GLMTQLVRLEPGADIEEAHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYYNITDYDKLH 578
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
L E I++ GD +A L++ Y
Sbjct: 579 DLFGQLLKETQRIKSEGDYKAGQALVETY 607
>gi|423131840|ref|ZP_17119515.1| hypothetical protein HMPREF9714_02915 [Myroides odoratimimus CCUG
12901]
gi|371641031|gb|EHO06622.1| hypothetical protein HMPREF9714_02915 [Myroides odoratimimus CCUG
12901]
Length = 678
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 36/329 (10%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW++ +D G E Y D + G+K ++E+ + I D + ++ + Q
Sbjct: 288 DYNVAWVKATKGNIDYNSGFIEVYADPL-GHKGSYESVVQINDFDMSKKMAVLSKEAQWF 346
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V + + + SGD + NLPN + I + G+ + L
Sbjct: 347 EDNSPLMAEHKKKNVTGVSYKTVIVASESGDASPSTPIGVNLPNADWIRAEHGSKSISLG 406
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ +A K K + ++ + ++ EL D H HE IG S +
Sbjct: 407 NIIDAYNHAGGSDKLKEFVHDEEELQLEEKYGELAD----KLHTALHEV---IGHASGQI 459
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLP----KSLVKSMYVSFLAG 669
G + L+ S +EE +AD+VGL+ L ++L KS+ K+ Y ++
Sbjct: 460 NKGV-GQPKETLKSYASTLEEGRADLVGLFYLYNPKLQELGLVDDWKSVGKAAYDGYIRN 518
Query: 670 CFRS--VRF----GLEESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVE 715
+ VR +EE+H + + W+FEK E + +++ D+DK+
Sbjct: 519 GLMTQLVRLEPGADIEEAHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYYNITDYDKLH 578
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
L E I++ GD +A L++ Y
Sbjct: 579 DLFGQLLKETQRIKSEGDYKAGQALVETY 607
>gi|288556590|ref|YP_003428525.1| NUDIX hydrolase [Bacillus pseudofirmus OF4]
gi|288547750|gb|ADC51633.1| NUDIX hydrolase [Bacillus pseudofirmus OF4]
Length = 172
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
DV + +K T R + GD+H ++ IF S +++L+Q+R FK+ WP +WD++
Sbjct: 5 DVYDINREKRERTWIRGKELGPGDFHLIIHVCIF-NSNEQMLIQQRQSFKEGWPNLWDLT 63
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNE--FADVY 129
+ G AGD+S +A+REL EE+G+ + FT IN E F D Y
Sbjct: 64 AGGSAIAGDTSQAAAERELHEEIGLKVDFKHIRPHFT------------INFEYGFDDFY 111
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + + TLQ EV VK+ + EE L+ ++ F+PY
Sbjct: 112 LIQ--KDVEIHTLTLQYEEVQNVKWASKEEILKLIKNEE--FLPY 152
>gi|120434428|ref|YP_860136.1| peptidase family M49 [Gramella forsetii KT0803]
gi|117576578|emb|CAL65047.1| peptidase, family M49 [Gramella forsetii KT0803]
Length = 691
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 30/324 (9%)
Query: 445 DIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
++AW+E + +D E Y D GY ++E+ + I+D +A++ N+Q E
Sbjct: 291 NVAWVEATEGNIDYINSFIEVYNDPK-GYTGSYESIVQIKDFDMSAKMSKVEQNVQWFED 349
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV 563
N P+ + +K V+ + + + SGD + NLPN I K G+ V L N+
Sbjct: 350 NSPIMDEHKKDSVVGVTYKTVIVAGESGDAAPSTPIGVNLPNSSWIRKQHGSKSVSLGNI 409
Query: 564 ----SEAKFKNILRPIADVCIRKEQQELVDFDSFFTH-NICHECCHGIGPHSITLPDGRQ 618
A N L+ A +++E+ + + + H H + H+ +
Sbjct: 410 INAYENAGGTNKLKEFA-----HDEEEIALSEKYGNQADKLHTALHEVVGHASGQLNKGV 464
Query: 619 STVRLELQELHSAMEEAKADIVGLWALK----FLIGRDLLPKSLVKSMYVSFLAGCFRS- 673
T + L+ S MEE +AD+VGL+ L +G + L K+ Y ++ +
Sbjct: 465 GTTKETLKSYASTMEEGRADLVGLYYLMDPKLEELGLTDNSEELGKAAYNDYIRNGLMTQ 524
Query: 674 -VRF----GLEESHGKGQALQFNWLFEK---EAFILHSDDTFSV-----DFDKVEGAVES 720
VR +EE+H + + W+FEK E I + D+ K+
Sbjct: 525 LVRLEPGEDVEEAHMRNRQWVSAWVFEKGKDEGVIEKVEKEGKTYYDIKDYQKLRELFGE 584
Query: 721 LSTEILTIQARGDKEAASLLLQKY 744
L E I++ GD EAA L++ Y
Sbjct: 585 LLKETQRIKSEGDYEAAKNLVENY 608
>gi|163787744|ref|ZP_02182191.1| putative membrane attached peptidase [Flavobacteriales bacterium
ALC-1]
gi|159877632|gb|EDP71689.1| putative membrane attached peptidase [Flavobacteriales bacterium
ALC-1]
Length = 675
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 138/332 (41%), Gaps = 42/332 (12%)
Query: 443 DSDIAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW D +D E Y D GY+ ++E + I D + ++ + +N Q
Sbjct: 285 DYNVAWTAATDGNVDYINSFIEVYNDPA-GYRGSYETIVQINDFDMSKKMAVLSENAQWF 343
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +A+K VI +V+ + +GD + NLPN I K+ G+ V L
Sbjct: 344 EDNSPLMDAHKKDSVIGVTYKVVTVAGEAGDASPSTPIGVNLPNANWIRKEVGSKSVSLG 403
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N++ A + K + ++ + +E +L D H HE +G S L
Sbjct: 404 NITHADNNSGSSGRLKEFVHDDEELKLEEEYGQLAD----KLHTALHEV---VGHASGQL 456
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
G T + L++ S +EE +AD+VGL+ +L L LV+ +A
Sbjct: 457 NPGVGET-KETLKKYASTLEEGRADLVGLY---YLYDSKLQELGLVEDWKKVGMAAYDGY 512
Query: 674 VRFGL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFD 712
+R GL EE+H + W FEK E +++ D+D
Sbjct: 513 IRNGLMGQLIRLKLGDNVEEAHMVNRQWVSAWAFEKGEADNVIEKVTRDGKTYYNINDYD 572
Query: 713 KVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
K+ L E I++ GD A L++ Y
Sbjct: 573 KLHALFGQLLRETQRIKSEGDYAAVEALVEGY 604
>gi|297623858|ref|YP_003705292.1| NUDIX hydrolase [Truepera radiovictrix DSM 17093]
gi|297165038|gb|ADI14749.1| NUDIX hydrolase [Truepera radiovictrix DSM 17093]
Length = 214
Score = 81.6 bits (200), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 7/146 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPG 66
E LDVL G+ TG KPR+ VHR G +HRT + WI + + E +L+QRR+ KD PG
Sbjct: 11 ELLDVLDAFGRPTGARKPRALVHREGLWHRTFHLWILSVHSGEPHVLMQRRSPHKDLEPG 70
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D++ GH+ +G+ + + RE++EELG+ + ++ + EF
Sbjct: 71 KLDVAVGGHLRSGE-GVAAGLREVEEELGLTVSLGELRYLGCLSAARTYPHAT--DREFQ 127
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAV 152
+ YL+ PL ++T EVSA+
Sbjct: 128 ETYLLR--RDAPLASYTPHPGEVSAL 151
>gi|340352586|ref|ZP_08675444.1| M49 family peptidase [Prevotella pallens ATCC 700821]
gi|339613392|gb|EGQ18152.1| M49 family peptidase [Prevotella pallens ATCC 700821]
Length = 672
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 43/310 (13%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L KA + + + K ++H D + S D D I W+ E + ++D G E Y DA
Sbjct: 241 LKKAENYCENNNQKDIIHLLIDYYTSGELADFDKYSIKWVTECEGQIDFINGFIEVYGDA 300
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G K ++E + +D +AT + K N Q E + P+D ++ K V V+
Sbjct: 301 L-GLKGSWEGIVHYKDLEATRRTKTISSNAQWFEDHSPVDKRFRKKVVKGITANVVCAAM 359
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS-----EAKFKNILRPIADVCIRKE 583
GD + NLPN + I + G+ V + N++ AK + I + I +
Sbjct: 360 LGGDEYPASAIGINLPNADWIRAEYGSKSVTISNLTCAYNMAAKGNGL---IDEFVIDAQ 416
Query: 584 QQELVDFDSFFT---HNICHECC-HGIGP-HSITLPDGRQSTVRLELQELHSAMEEAKAD 638
+EL++ T H HEC HG G S PD L+ + +EEA+AD
Sbjct: 417 TRELIENFGSLTDELHTDLHECLGHGSGKLLSGVDPDS--------LKNYGNTIEEARAD 468
Query: 639 IVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL-------------EESHGKG 685
+ GL+ ++ R LL L+KS +F A + + GL EE+H +
Sbjct: 469 LFGLY---YMADRKLLELGLLKSE-EAFKAQYYSYIMNGLITQLARIKPNKQIEEAHMQN 524
Query: 686 QALQFNWLFE 695
+AL W +E
Sbjct: 525 RALIAWWAYE 534
>gi|300854945|ref|YP_003779929.1| NUDIX hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300435060|gb|ADK14827.1| predicted NUDIX hydrolase [Clostridium ljungdahlii DSM 13528]
Length = 173
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/166 (36%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV KT T R GDYH V+ IF S E+L+Q+R FK+ W MW
Sbjct: 2 ELWDVYDSERNKTNRTMVRGRDFNEGDYHMVVHICIF-NSKGEMLIQQRQPFKEGWSNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G G++S ++A+REL EELGI + T IN +N F DV
Sbjct: 61 DITVGGSAIEGETSQMAAKRELMEELGIKINLQDIRPHLT------IN----FDNGFDDV 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
YL+ I + TLQ EV VK+ + EE +++ D F+ Y
Sbjct: 111 YLIQ--KDIDIVDLTLQYEEVKCVKWASKEEIFSMI--DSGEFISY 152
>gi|403378532|ref|ZP_10920589.1| hydrolase [Paenibacillus sp. JC66]
Length = 217
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE---LLLQRRADFKDSW 64
+E DV G+ G ++ R +VHR+G +H+T + WI + LLLQ R KD++
Sbjct: 4 DEKFDVFNEEGKIIG-SETRRQVHRLGLWHQTFHCWIIKRNNAGEWLLLLQLRHKNKDTY 62
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNE 124
P M D+S AGH+ AG+ + REL+EEL + + + + T L+ +V++D + I+ E
Sbjct: 63 PNMLDVSCAGHLLAGE-GIEDGTRELKEELNVEVRIEDLTYCGTILEDHVLSD-ECIDRE 120
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166
++L+ LE + +Q +EVS + + ++K L K
Sbjct: 121 RIHLHLLRC--DQQLEDYQVQLSEVSGLFELTLADFKKLYEK 160
>gi|423610359|ref|ZP_17586220.1| hypothetical protein IIM_01074 [Bacillus cereus VD107]
gi|401249676|gb|EJR55982.1| hypothetical protein IIM_01074 [Bacillus cereus VD107]
Length = 202
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ I+ EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LIDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
EV V + + LL KD PS
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKKDVPS 159
>gi|422417840|ref|ZP_16494795.1| MutT/nudix family protein [Listeria seeligeri FSL N1-067]
gi|313634917|gb|EFS01317.1| MutT/nudix family protein [Listeria seeligeri FSL N1-067]
Length = 169
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ Q TG T R + G+ H V+ IF Q LL+Q+R K+SW G W
Sbjct: 2 EKWDLYDNQRQVTGKTHIRGGKMQPGELHLVVHVCIFNAENQ-LLIQKRQKDKESWSGYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE+ EELG I+L + +F F F +N F
Sbjct: 61 DLSAAGSALKGETSQQAAEREVHEELGITIDLSNERAKFSFHF------------DNGFD 108
Query: 127 DVYLVT-TLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + P L LQQ EV+ +++ EE +NL A + +PY
Sbjct: 109 DYWFITKNIQPSDL---ILQQEEVADARFVTKEELENLSATGE--MIPY 152
>gi|182416534|ref|ZP_02947961.1| putative Nudix hydrolase [Clostridium butyricum 5521]
gi|237667140|ref|ZP_04527124.1| hydrolase, NUDIX family [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379606|gb|EDT77088.1| putative Nudix hydrolase [Clostridium butyricum 5521]
gi|237655488|gb|EEP53044.1| hydrolase, NUDIX family [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 195
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 89/157 (56%), Gaps = 10/157 (6%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWP 65
EE +D+ K G+ K R +VH+ G H+ V +I ++++ + Q+R+ +KD++P
Sbjct: 2 EEMIDIYDENFNKIGV-KSRFDVHKYGFKHKVVQCYIINKIDNSKWIYFQQRSFYKDNYP 60
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G +DI+ AGHI +G+ + S RELQEE+G+ + K + T L+ N G +++E
Sbjct: 61 GFYDIACAGHIDSGEQASSSMIRELQEEIGLRVEKSQLNYTGTKLENK--NHGNILDDEI 118
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162
++Y+++ N E F + EV + + + +YK+
Sbjct: 119 CELYVLSIEN----ENFVFGE-EVEDMVKVLFNDYKS 150
>gi|428310933|ref|YP_007121910.1| isopentenyldiphosphate isomerase [Microcoleus sp. PCC 7113]
gi|428252545|gb|AFZ18504.1| isopentenyldiphosphate isomerase [Microcoleus sp. PCC 7113]
Length = 240
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 8 EEHLDVL-TMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELL-LQRRADFKDSWP 65
EE D+L +TG TG TK RS VH GD+H + W+ + S + ++ LQRR + KD P
Sbjct: 29 EEVFDILDPVTGYPTGQTKARSLVHAEGDWHGAFHLWLVSHSKEPMMYLQRRKEDKDVAP 88
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G D+ GH +G+ + RE++EE+G+ + + + L V + NNE
Sbjct: 89 GYLDVPVGGHYRSGE-KMADGVREVEEEIGLTVKLEDLTPLGKRL--VVYREQGVKNNEL 145
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFN 185
DV+L T + +EAF LQ E++ I E L + S+ V +L N
Sbjct: 146 IDVFLYET--DLTIEAFKLQPEELAGFYEIPVREMLKLFTLEGYSYEAQGV-----ELLN 198
Query: 186 IISQRYKENTMERSLT 201
+ Q ++ N ++S
Sbjct: 199 RLPQAHQMNVTKKSFV 214
>gi|228997088|ref|ZP_04156719.1| MutT/nudix [Bacillus mycoides Rock3-17]
gi|229004743|ref|ZP_04162479.1| MutT/nudix [Bacillus mycoides Rock1-4]
gi|228756536|gb|EEM05845.1| MutT/nudix [Bacillus mycoides Rock1-4]
gi|228762713|gb|EEM11629.1| MutT/nudix [Bacillus mycoides Rock3-17]
Length = 204
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPG 66
E L + G K G K R +VHR GD+H T + W + +++ L Q RA K +PG
Sbjct: 3 EWLTIFDTEGNKIG-KKLRDDVHRDGDWHETFHCWFVEKDNEDIFLHFQLRAKNKKDFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
WDI+SAGHI + I RE++EELG++ E+ F + I FI+ E
Sbjct: 62 KWDITSAGHIMHDEDVRIGGLREVKEELGLSFQATDLEYKGIFKINHEIP--HFIDREMC 119
Query: 127 DVYLVTTLNPIPL 139
+Y P+P
Sbjct: 120 HMYFHAVTKPLPF 132
>gi|340349427|ref|ZP_08672444.1| M49 family peptidase [Prevotella nigrescens ATCC 33563]
gi|339611495|gb|EGQ16319.1| M49 family peptidase [Prevotella nigrescens ATCC 33563]
Length = 664
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 195/468 (41%), Gaps = 63/468 (13%)
Query: 353 QEDATSFFTVIK-----RRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLT 407
QE+ F+ K +R F L+S+L H N ++ L + Y +
Sbjct: 185 QEEVERFYANKKEKAGDKRLSFGLNSTLVKH----DNKLEEIVWKL-----NGRYGKTIK 235
Query: 408 RASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYE 463
+ L+KA + K ++ ++S + D D I W+ E + ++D G E
Sbjct: 236 QIVYWLNKAITYCENNDQKEIIRLLIAYYISGDLADFDKYSIKWVTECNGQIDFINGFIE 295
Query: 464 TYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRV 523
Y DA+ G K ++E + +D +AT + ++ N Q E + P+DN +K + V V
Sbjct: 296 VYGDAL-GLKGSWEGIVHYKDLEATRRTQIISANAQWFEDHSPVDNRFKKEVVKGVTANV 354
Query: 524 IQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE-----AKFKNILRP-IAD 577
+ GD + NLPN + I + G+ V + N+++ AK + + D
Sbjct: 355 VCAAMLGGDEYPASAIGINLPNADWIRAEYGSKSVTISNLTQAYNMAAKGNGFIEEFVVD 414
Query: 578 VCIRKEQQELVDFDSFFT---HNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEE 634
IRK L++ T H HEC +G S L G S L+ + +EE
Sbjct: 415 AQIRK----LIEAYGNLTDELHTDLHEC---LGHGSGKLLSGIDSD---SLKNYGNTIEE 464
Query: 635 AKADIVGLWAL--KFLIGRDLL-PKSLVKSMYVSFLAGCFRS--VRFG----LEESHGKG 685
A+AD+ GL+ + K L+ LL + K+ Y +++ + R +EE+H +
Sbjct: 465 ARADLFGLYYIGDKKLLELGLLDSEEAFKAQYYTYIMNGLMTQLARIKPNKQIEEAHMQN 524
Query: 686 QALQFNWLFEKE------AFILHSDDTFSV--------DFDKVEGAVESLSTEILTIQAR 731
+AL W +E F+ DDT D+ + TEI I++
Sbjct: 525 RALIAWWAYEIGRSENVIEFVKLPDDTTKELKTFVCINDYVALRQIFAQQLTEIQRIKSM 584
Query: 732 GDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLLQ 779
GD AA L++ Y K ++ +DIAP +N +++
Sbjct: 585 GDFNAARKLVESYAVKVN--KALHNEVLQRYAQLDIAPYKGFINPIMK 630
>gi|397600412|gb|EJK57648.1| hypothetical protein THAOC_22284 [Thalassiosira oceanica]
Length = 206
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG T RSEV R G + T + W+ S +LLQ+R++ KD++PG WDIS+AGH+
Sbjct: 37 TGRTALRSEVRRDGLWVSTAHVWLVNPSNSTVLLQKRSEQKDTFPGRWDISAAGHVGCRT 96
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+++ +A+ EL EELG+ +P + + + G +N + VY + +
Sbjct: 97 TAVQAARAELAEELGVEIPVERLQLSHVVPAEMAAVGG---SNAYEHVYFLEWRGGD--D 151
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
F L EV+AV++ E L +D + P
Sbjct: 152 RFALGTAEVAAVEWRPVGEVIRCLRSNDEGYSP 184
>gi|228991002|ref|ZP_04150965.1| MutT/nudix [Bacillus pseudomycoides DSM 12442]
gi|228768782|gb|EEM17382.1| MutT/nudix [Bacillus pseudomycoides DSM 12442]
Length = 204
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPG 66
E L + G K G K R +VHR GD+H T + W + +++ L Q RA K +PG
Sbjct: 3 EWLTIFDTEGNKIG-KKLRDDVHRDGDWHETFHCWFVEKDNEDIFLHFQLRAKNKKDFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
WDI+SAGHI + I RE++EELG++ E+ F + I FI+ E
Sbjct: 62 KWDITSAGHIMHDEDIRIGGLREVKEELGLSFQATDLEYKGIFKINHEIP--HFIDREMC 119
Query: 127 DVYLVTTLNPIPL 139
+Y P+P
Sbjct: 120 HMYFHAVTKPLPF 132
>gi|47096699|ref|ZP_00234285.1| MutT/nudix family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254828998|ref|ZP_05233685.1| MutT/nudix family protein [Listeria monocytogenes FSL N3-165]
gi|254913614|ref|ZP_05263626.1| MutT/nudix family protein [Listeria monocytogenes J2818]
gi|254938055|ref|ZP_05269752.1| MutT/nudix family protein [Listeria monocytogenes F6900]
gi|386046029|ref|YP_005964361.1| MutT/nudix family protein [Listeria monocytogenes J0161]
gi|47014953|gb|EAL05900.1| MutT/nudix family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258601409|gb|EEW14734.1| MutT/nudix family protein [Listeria monocytogenes FSL N3-165]
gi|258610668|gb|EEW23276.1| MutT/nudix family protein [Listeria monocytogenes F6900]
gi|293591626|gb|EFF99960.1| MutT/nudix family protein [Listeria monocytogenes J2818]
gi|345533020|gb|AEO02461.1| MutT/nudix family protein [Listeria monocytogenes J0161]
Length = 169
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E+ Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNADRELTGKTHIRGEKLAPGELHLVVHVCIFNENGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ L TLQ+ EV+ +++ E + L + F+PY
Sbjct: 117 --------VELSDLTLQKEEVADARFVTKEALEAL--RSSGEFIPY 152
>gi|206890315|ref|YP_002249434.1| nudix hydrolase 3 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206891194|ref|YP_002249384.1| nudix hydrolase 3 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742253|gb|ACI21310.1| nudix hydrolase 3 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743132|gb|ACI22189.1| nudix hydrolase 3 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 194
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
EE L+V+ G+ I PRS +H H+ V+ +F S ELLLQ+RA KD PG
Sbjct: 2 EEFLEVVDRDGRIISIA-PRSIIHGNPSMLHKVVHVLVF-NSKGELLLQKRASHKDVAPG 59
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
WD S GHI G+ L +A+RE+ EELGI + F++T++ N N E
Sbjct: 60 KWDTSVGGHIMPGEDILTAAKREMLEELGI--VSENLHFLYTYIHSN--------NYESE 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
VY T++ P F+ + E+ + + + E+ + LL D
Sbjct: 110 LVYTYCTVHEGP---FSFNKNEIEEIAFWSIEKMQQLLNFD 147
>gi|288927727|ref|ZP_06421574.1| peptidase, M49 family [Prevotella sp. oral taxon 317 str. F0108]
gi|288330561|gb|EFC69145.1| peptidase, M49 family [Prevotella sp. oral taxon 317 str. F0108]
Length = 665
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 174/405 (42%), Gaps = 45/405 (11%)
Query: 401 EYNSYLTRASELLHKAGDMASSPSLKRLL------HSKADAFLSNNYYDSDIAWI-ELDS 453
EY + + L KA +A + +R++ + D L + Y I W+ E
Sbjct: 237 EYGEAIRQIIYWLDKAKSVAENQQQQRVIDLLIKYYRTGDLHLFDEY---SIEWLKEQAG 293
Query: 454 ELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKS 513
+D G E Y D + G KA++E + +D +AT + +L DN Q E + P+D+ +K
Sbjct: 294 NVDFINGFIEVYGDPL-GIKASWEGIVEYKDLEATRRTRLISDNAQWFEDHSPVDSRFKK 352
Query: 514 KDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK---- 569
+V V+ GD + NLPN + I G+ V + N+++A K
Sbjct: 353 AEVRGVTANVVCAAMLGGDEYPSTAIGINLPNADWIRAQHGSKSVTISNITDAYNKAAKG 412
Query: 570 NILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLEL 625
N + + I KE ++V H HEC HG G LP L
Sbjct: 413 NGFKE--EFVIDKETLDIVSRYGDICDELHTDLHECLGHGSGK---LLPGVSPDA----L 463
Query: 626 QELHSAMEEAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLAGCFRS----VRFG- 677
+ + +EEA+AD+ GL+ + L LLP K+ +S Y +++ + + G
Sbjct: 464 KAYGNTIEEARADLFGLYYMADDKLQELGLLPDKNAFRSQYYTYMMNGLMTQLTRIERGK 523
Query: 678 -LEESHGKGQALQFNWLFEKEA----FILHSDDTFSV--DFDKVEGAVESLSTEILTIQA 730
+EE+H + +AL +W E + + T+ +++++ L E+ I++
Sbjct: 524 DIEEAHMRNRALIAHWTLEHGKGAVELVKRNGKTYVQINNYEQLHRLFGELLAEVQRIKS 583
Query: 731 RGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVN 775
GD AA L++ Y ++ + LE +DIAP +N
Sbjct: 584 EGDFNAARNLVENYAVKVDG-ELHAEVLERF-AKLDIAPYKGFIN 626
>gi|160933216|ref|ZP_02080605.1| hypothetical protein CLOLEP_02062 [Clostridium leptum DSM 753]
gi|156868290|gb|EDO61662.1| hydrolase, NUDIX family [Clostridium leptum DSM 753]
Length = 180
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV G+KTG K + + G+YH V AW+F +E+L+Q+R+ ++ PG W
Sbjct: 5 ELWDVYDKKGRKTGTLKEKEADYLPGEYHLAVEAWVF-NRRREILIQQRSWHREILPGKW 63
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G I AG+ S REL+EELG+ + ++ F+ ++++ + D+
Sbjct: 64 SLTT-GRIIAGEDSEQGCVRELKEELGMQVKQEELSFLRRIVREDPL---------IWDI 113
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166
Y TL +P+E LQ+ EV +++++++++ L +
Sbjct: 114 YF--TLQDVPVEELRLQKEEVIQARWVSFDQFRAYLKR 149
>gi|229917280|ref|YP_002885926.1| NUDIX hydrolase [Exiguobacterium sp. AT1b]
gi|229468709|gb|ACQ70481.1| NUDIX hydrolase [Exiguobacterium sp. AT1b]
Length = 193
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+EHL + QK G K R++VH GD+H T + W + E + LQRR+ K +PG
Sbjct: 2 KEHLTIFDDNHQKIG-EKERNQVHLDGDWHETFHCWFWKEDL--IYLQRRSMEKQDFPGK 58
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
+DI++AGH+ A D ++ + RE++EELG++L + F+ F ++VI +F++ EFA
Sbjct: 59 YDITAAGHL-ATDETIANGVREIEEELGLSLTFEQLTFMGIF--EDVIELDEFLDREFAH 115
Query: 128 VY 129
Y
Sbjct: 116 TY 117
>gi|281420255|ref|ZP_06251254.1| putative dipeptidyl-peptidase III [Prevotella copri DSM 18205]
gi|281405750|gb|EFB36430.1| putative dipeptidyl-peptidase III [Prevotella copri DSM 18205]
Length = 668
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 192/479 (40%), Gaps = 86/479 (17%)
Query: 323 LPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLS---GHI 379
L + NFY ++ + E E + + + E+ E A S+ L+S L+ G +
Sbjct: 164 LVQTSACNFYE-NVSQAEVERFYARMKEEGNEQAPSY----------GLNSKLTKRNGEL 212
Query: 380 VDATNHSVGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN 439
V+ G LY +E S+L RA + A + K L+ + +
Sbjct: 213 VELKWTEDG----LYGAAI-KEIVSWLLRAQK-------YAENEEQKHLIDLLVKYYRTG 260
Query: 440 NYYDSD---IAWIEL-DSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFG 495
+ D D IAW++ + +D G E Y D + G K T+E + +D +AT + +
Sbjct: 261 DLKDFDRYSIAWVQQHEGMIDFINGFIEVYGDPL-GLKGTWEGIVEYKDLEATKRTQTIS 319
Query: 496 DNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGT 555
N Q E + P+D ++ +V VI G+ + NLPN I ++ G+
Sbjct: 320 QNAQWFEDHSPVDPRFRKPEVKGVTANVICAAMLGGEEYPASAIGINLPNANWIRQEYGS 379
Query: 556 SMVMLKNVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGI 606
V + N++EA F++ D Q E + D H HEC HG
Sbjct: 380 KSVTIGNLTEAYNKAAQGNGFRDEFVIDEDTISLMNQYEDITDD---LHTDLHECLGHGS 436
Query: 607 GP-HSITLPDGRQSTVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLLPK-SLVKSM 662
G T PD L+ S +EEA+AD+ GL+ A L+ L P K+
Sbjct: 437 GQLLPGTDPDA--------LKAYGSTIEEARADLFGLYYVADHKLVELGLTPNDEAYKAQ 488
Query: 663 YVSFLAGCF--RSVRF----GLEESHGKGQALQFNWLFE--------------------- 695
Y +L +++R +EE+H + +AL W+ E
Sbjct: 489 YYGYLMNGLLTQTIRIKEGDKIEEAHMRNRALIAWWVMEHAEGAVELVKMDMNYASAEDA 548
Query: 696 ---KEAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQP 750
E I+ + + D+ K+ L EI I++ GD EAA LL++KY P
Sbjct: 549 LKDSEGNIITTKTYVKINDYAKLRHLFGELLAEIQRIKSEGDFEAARLLVEKYAVNIDP 607
>gi|430745426|ref|YP_007204555.1| Peptidase family M49 [Singulisphaera acidiphila DSM 18658]
gi|430017146|gb|AGA28860.1| Peptidase family M49 [Singulisphaera acidiphila DSM 18658]
Length = 667
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 140/328 (42%), Gaps = 27/328 (8%)
Query: 445 DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
DIAW+ + DS +D G E Y DA G K ++E+ + + + T +++ + Q E
Sbjct: 284 DIAWVRDKDSPVDTINGFIEVYMDA-RGVKGSWESAVFFVNQEKTGEIRKLAADAQWFED 342
Query: 504 NLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQT-VAFNLPNDERIVKDRGTSMVMLKN 562
++P Y+ +V I+++ +GD GP T + NLPND+ + + G+ V L N
Sbjct: 343 HMPWLKEYRKPNVQGITANAIEVVIETGDC-GPITPIGINLPNDQEVRERYGSKSVSLSN 401
Query: 563 VSEAKFKNILRPI-ADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTV 621
V EA K+ A+ E+ S + IG S + +
Sbjct: 402 VLEASDKSTPTTFRAEFSWTPEEVTRATKWSVLGGELLVNMHEVIGHASGRINPKLEGKP 461
Query: 622 RLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVK---------SMYVSFLAGC-- 670
+ L+E +SA+EE +AD+V L+ F+ L LVK ++Y ++
Sbjct: 462 QDLLKEQYSALEEGRADLVALY---FMPDPRLAELGLVKAEDQAEVTQAVYENYTRNALV 518
Query: 671 -FRSVRFG--LEESHGKGQALQFNWLFEKEAFI---LHSDDTFSV--DFDKVEGAVESLS 722
R + G +EE H + + + WL + I TF V D V L
Sbjct: 519 QLRRIPTGAQIEEDHMRNRQMVVRWLMDHTKAIDVRQRDGKTFYVMTDAKAFHEGVGKLL 578
Query: 723 TEILTIQARGDKEAASLLLQKYCTMTQP 750
E+ I++ GD EAA L + Y P
Sbjct: 579 AEVQRIKSEGDYEAAKKLFETYGIHFDP 606
>gi|386712633|ref|YP_006178955.1| MutT/NUDIX family protein [Halobacillus halophilus DSM 2266]
gi|384072188|emb|CCG43678.1| MutT/NUDIX family protein [Halobacillus halophilus DSM 2266]
Length = 201
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
K R+EVH GD+H T W++ A+ L Q+RA K +PG++DIS+AGHI AG+
Sbjct: 17 VKERTEVHCDGDWHETFQCWLYEMDADGQVCLFFQKRAADKAEFPGLYDISAAGHIEAGE 76
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+ + + +RE+ EELGI+L K+ + + T+ ++ +I+D + E VY ++P P E
Sbjct: 77 NLIQAGRREIYEELGISLWKEDLKSIGTY-KEELISD-TLKDRELCRVY----ISPYPGE 130
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLL 164
EV + I +K +L
Sbjct: 131 KDFSLGNEVEDLVRIEINGFKQVL 154
>gi|305667362|ref|YP_003863649.1| putative membrane attached peptidase [Maribacter sp. HTCC2170]
gi|88709410|gb|EAR01643.1| putative membrane attached peptidase [Maribacter sp. HTCC2170]
Length = 672
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 183/451 (40%), Gaps = 70/451 (15%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL---SGHIVDATNHS 386
NFY P + + E + ++ +K +D R E L+S+L +G IV+ S
Sbjct: 188 NFYDPSITDADVEAFYAT-ADKGPKD---------RPIEAGLNSTLVRENGKIVEKVWKS 237
Query: 387 VGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN--NYYDS 444
G Y + + + L KA +A + + L D + + N +D
Sbjct: 238 GGM------------YGTAIDEIIKWLEKAKSVAENDKQAKTLGLLVDYYKTGDLNIWDQ 285
Query: 445 -DIAW-IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
I W + +D G E Y D GY+ ++E+ I ++D + + Q+ + +N Q E
Sbjct: 286 YCIEWATSTEGNIDWINGFIEVYNDPK-GYRGSYESIIQVKDFEMSKQMAVLSENAQWFE 344
Query: 503 QNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKN 562
N P+ +++K V+ + I + +GD + NLPN+ I ++ G+ V L N
Sbjct: 345 DNAPLMDSHKKDSVVGISYKTINVAGEAGDASPSTPIGVNLPNNNWIRQEHGSKSVSLGN 404
Query: 563 VSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLP 614
+ +A + K ++ + ++ +L D H + I P I P
Sbjct: 405 IIDAYNNAGGSGRLKEYAYDAEEIELEEKHGKLADKLHTALHEVVGHASGQINP-GIGQP 463
Query: 615 DGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV-------KSMYVSFL 667
+ L+ S MEE +AD+VGL+ +L+ L LV K+ Y ++
Sbjct: 464 -------KETLKNYASTMEEGRADLVGLY---YLMDPKLQELGLVENSEEIGKAAYDGYI 513
Query: 668 AGCFRS--VRFGL----EESHGKGQALQFNWLFEKEAF------ILHSDDTFS--VDFDK 713
+ VR L EE H + W FEK A I T+ D+ K
Sbjct: 514 RNGLITQLVRINLGDDIEEDHMVNRQWVSAWAFEKGAADNVIEKIEKDGKTYYNITDYAK 573
Query: 714 VEGAVESLSTEILTIQARGDKEAASLLLQKY 744
+ L E I++ GD +AA L++ Y
Sbjct: 574 LRDLFGQLLKETQRIKSEGDFKAAQDLVEGY 604
>gi|255023419|ref|ZP_05295405.1| MutT/nudix family protein [Listeria monocytogenes FSL J1-208]
gi|422808475|ref|ZP_16856886.1| Putative Nudix hydrolase YfcD [Listeria monocytogenes FSL J1-208]
gi|378753509|gb|EHY64093.1| Putative Nudix hydrolase YfcD [Listeria monocytogenes FSL J1-208]
Length = 169
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H ++ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNADRELTGKTHIRGEKLAPGELHLVIHVCIFNEDGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG G++S +A+RE+QEELGI + F++ + +D FI +
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYHFEAGFDDYWFITKD---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIIS 188
+ L TLQ+ EV+ +++ E + L + F+PY QLF++ S
Sbjct: 117 --------VKLSDLTLQKEEVADARFVTKEGLEAL--RSSGEFIPYFF---LNQLFDLKS 163
>gi|325848599|ref|ZP_08170215.1| hydrolase, NUDIX family [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480680|gb|EGC83738.1| hydrolase, NUDIX family [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 175
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E++D+ KTG R ++ G + ++ IF + + LL+Q+R K SWP
Sbjct: 2 KEYVDLYDNFRNKTGKVIERRDIVPKGLFRLIIHVLIFDKKGR-LLIQKRTKSKRSWPNR 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV-INDGKFINNEFA 126
WD++ +G +S+G++S ISA REL EELGI ++ F+ N+ IN G I+
Sbjct: 61 WDLTVSGAVSSGETSQISASRELFEELGI-------KYDFSNSYPNISINTGFRID---- 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
DVY++ I L+ LQ+ EVS K++ ++ ++ D FVPY
Sbjct: 110 DVYIIKN-KDINLKKLKLQEEEVSDAKFVNLKQLLEII--DRGEFVPY 154
>gi|217965542|ref|YP_002351220.1| MutT/nudix family protein [Listeria monocytogenes HCC23]
gi|386007094|ref|YP_005925372.1| MutT/nudix family protein [Listeria monocytogenes L99]
gi|386025682|ref|YP_005946458.1| MutT/nudix family protein [Listeria monocytogenes M7]
gi|217334812|gb|ACK40606.1| MutT/nudix family protein [Listeria monocytogenes HCC23]
gi|307569904|emb|CAR83083.1| MutT/nudix family protein [Listeria monocytogenes L99]
gi|336022263|gb|AEH91400.1| MutT/nudix family protein [Listeria monocytogenes M7]
Length = 169
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + TG T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNADRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE+QEELG I+L +F + F F
Sbjct: 61 DLSAAGSALKGETSRQAAEREVQEELGIAIDLSNTRAKFSYHF------------EAGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + L TLQ+ EV+ +++ E + L + F+PY
Sbjct: 109 DYWFIT--KDVELSDLTLQKEEVADARFVTKEALEVL--RSSGEFIPY 152
>gi|372325618|ref|ZP_09520207.1| Putative Nudix hydrolase [Oenococcus kitaharae DSM 17330]
gi|366984426|gb|EHN59825.1| Putative Nudix hydrolase [Oenococcus kitaharae DSM 17330]
Length = 177
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
EH D+L + G K R + G++H VNA IF E+LLQ+R+ K PG W
Sbjct: 15 EHWDLLNKRREIIG-QKRRGQAFSAGEWHLVVNATIF-NFEHEVLLQQRSFNKIGRPGEW 72
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+ + G AG++SL + +RE++EE+ +N FV +F V F D
Sbjct: 73 DLETGGSALAGETSLTAIRREVKEEINLNYAFKTENFVESFRHWPV----------FDDW 122
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y + +PL AF +Q++E+ ++++ E +A D+ +PY
Sbjct: 123 YAIKV--DLPLSAFQIQKSEIEQIRFVPITELTQFIAADN---LPY 163
>gi|229084954|ref|ZP_04217206.1| MutT/nudix [Bacillus cereus Rock3-44]
gi|228698270|gb|EEL51003.1| MutT/nudix [Bacillus cereus Rock3-44]
Length = 204
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE---LLLQRRADFKDSWP 65
E L + G G K R++VHR GD+H T + W F E E L Q RA K +P
Sbjct: 3 EWLTIFDTAGNNIG-KKLRNDVHRDGDWHETFHCW-FVEKENEDISLYFQLRAKNKKDFP 60
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G WDI+SAGHI G+ I RE++EELG++ E+ F + I FI+ E
Sbjct: 61 GKWDITSAGHIMHGEDVRIGGLREIEEELGLSFQTTNLEYKGIFKINHEIP--HFIDREM 118
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
+Y +P EV V I + LL + PS
Sbjct: 119 CHMYFHAVTKSLPFAP----GEEVEDVMKINATSFLQLLKGEIPS 159
>gi|89891460|ref|ZP_01202965.1| dipeptidyl-peptidase III [Flavobacteria bacterium BBFL7]
gi|89516234|gb|EAS18896.1| dipeptidyl-peptidase III [Flavobacteria bacterium BBFL7]
Length = 669
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 135/329 (41%), Gaps = 42/329 (12%)
Query: 446 IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W + D +D G E Y D I YK ++E + I+D + ++++ N Q E N
Sbjct: 286 IVWSKSTDGAVDWITGFVEVYNDPI-AYKGSYETIVQIKDFDMSRKMEVLSANAQWFEDN 344
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+ +K K V + + + +GD + NLPN+ I + G+ V L N+
Sbjct: 345 SPLMAEHKKKKVTGVSYKTVNVAGEAGDASPATPIGVNLPNNVWIREVHGSKSVSLGNII 404
Query: 565 EA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDG 616
EA + + ++ + KE L D H HE +G S + +G
Sbjct: 405 EAYGSSGSSGRLEEFAFDEEEIALEKEYGALAD----KLHTALHEV---VGHASGQINEG 457
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRF 676
+T + L+ S +EE +AD+ GL+ +L+ L LVK + A +R
Sbjct: 458 V-ATPKETLKSYKSTIEEGRADLFGLY---YLMDPKLEELGLVKDWQKTGTAAYDGYIRN 513
Query: 677 GL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVE 715
GL EE H + + W++EK E + + + D+ K+
Sbjct: 514 GLISQLVRLELGQDVEEDHMRNRQWVSAWVYEKGLEDNVIEKVTKDGNTYYDIKDYVKLR 573
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
L E I + GD EAA L++ Y
Sbjct: 574 ELFGQLLRETQRITSEGDFEAAQALVEDY 602
>gi|108805554|ref|YP_645491.1| NUDIX hydrolase [Rubrobacter xylanophilus DSM 9941]
gi|108766797|gb|ABG05679.1| NUDIX hydrolase [Rubrobacter xylanophilus DSM 9941]
Length = 209
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDSWP 65
E +DVL G +TG+ P+ E HR G +HR + W+ A LLLQRRA KD+WP
Sbjct: 3 ELVDVLDARGDRTGLAVPKEEAHRRGLWHRCFHCWVCGRDAAGEPYLLLQRRAAGKDTWP 62
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G D+++AGH+ +G+ L + +E P ++Q + + + E
Sbjct: 63 GYLDVTAAGHLRSGEEPLDGLRELEEELGLRPDPSRLIPLGTRRIEQEI---PQGCDREL 119
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
V+L+ P PL F LQ+ EV+++ ++ E LL + + V Y
Sbjct: 120 HYVFLLVDHTP-PLR-FRLQREEVASLVALSLSEAGRLLREGEARAVEY 166
>gi|423606243|ref|ZP_17582136.1| hypothetical protein IIK_02824 [Bacillus cereus VD102]
gi|401241799|gb|EJR48177.1| hypothetical protein IIK_02824 [Bacillus cereus VD102]
Length = 202
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIKEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ PSF V
Sbjct: 135 ---GEEVDDVMKIHATSFLQLLKREIPSFTATSV 165
>gi|333904994|ref|YP_004478865.1| NUDIX hydrolase [Streptococcus parauberis KCTC 11537]
gi|333120259|gb|AEF25193.1| NUDIX hydrolase [Streptococcus parauberis KCTC 11537]
Length = 173
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 20 KTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG 79
KTG T RS GD H V+ IF + E+L+Q+R K+ +P MWDIS G AG
Sbjct: 14 KTGRTMIRSHQFEEGDLHLVVHLCIF-NTKGEMLIQQRQKDKEDFPNMWDISVGGSALAG 72
Query: 80 DSSLISAQRELQEELGI--NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPI 137
++ + RE QEELGI +L + +F F F D +LV + +
Sbjct: 73 ETPQQAIMREAQEELGISFDLSETRPQFTINF------------EEGFDDTFLV--IADV 118
Query: 138 PLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L +LQ+ EV AVK+ + +E ++A D F+PY
Sbjct: 119 NLNDLSLQEEEVQAVKWASRQEIFQMMA--DEKFIPY 153
>gi|227500223|ref|ZP_03930292.1| NUDIX hydrolase [Anaerococcus tetradius ATCC 35098]
gi|227217745|gb|EEI83049.1| NUDIX hydrolase [Anaerococcus tetradius ATCC 35098]
Length = 171
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ +TG T R +V G Y V+ IF +S + LL+Q+R K S G+W
Sbjct: 2 EELDLYDENRIRTGKTYIRGDVMPEGTYRLIVHLCIFDDSGR-LLIQQRQKSK-SMGGLW 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G AG+SS + +REL EELGINL F ++ I F + F D
Sbjct: 60 DITCGGAAKAGESSKEAIERELGEELGINLD---------FSKKRPILTANF-QHGFDDF 109
Query: 129 YLVTT-LNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVN 177
YL+ ++P L+ LQ+ EV A ++ +YEE +L+ K+ FV Y N
Sbjct: 110 YLIREDVDPRKLK---LQKEEVEAARWASYEEVMDLIQKE--KFVKYKKN 154
>gi|162451051|ref|YP_001613418.1| mutT/nudix family protein [Sorangium cellulosum So ce56]
gi|161161633|emb|CAN92938.1| mutT/nudix family protein [Sorangium cellulosum So ce56]
Length = 236
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 24/159 (15%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--------------L 52
+EE D+L G+ G+ K R VHR GD+HR+V+ W+ E + +
Sbjct: 6 EEELFDLLDDGGRPLGVRKARRLVHRDGDWHRSVHVWVLLERGPDGLEPDGGRSAAEPWV 65
Query: 53 LLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINL-PKDAFEFVFTFLQ 111
L Q+R+ KD+WPG +++ +GH AG+ L A RE +EE+G+ L P+D Q
Sbjct: 66 LFQQRSPDKDTWPGALEVAVSGHYRAGE-DLAGALREAEEEIGLPLSPRDVVRLGTRRSQ 124
Query: 112 QNVINDGKFINNEFADVYLVTT------LNPIPLEAFTL 144
+ + ++ E DV L TT L P P E L
Sbjct: 125 DD--HAPGIVDRELQDVLLATTRRALAELRPDPREVTAL 161
>gi|210623915|ref|ZP_03294124.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275]
gi|210153279|gb|EEA84285.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275]
Length = 371
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 3 ESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE---LLLQRRAD 59
+ ++ +E LD+ +K G T R E+H G H+ V+ W F E T+ Q+RA
Sbjct: 18 DEILNKEILDIYDKDFEKIG-TATRGEIHEKGHIHKVVHCW-FEEDTENGKYCYFQQRAM 75
Query: 60 FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGK 119
+K S+PG++ + GHI +G+ + +RE+ EE GI + F+ + I DG
Sbjct: 76 YK-SYPGLYGVMVGGHIDSGEDVFEALKREISEEAGIVAKEKNISFINEIFEN--IVDGD 132
Query: 120 FINNEFADVYLV-----TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
FI+NE +VY T NP EV+ V + EEYK +
Sbjct: 133 FIDNEICEVYRYKVDEDTVFNP---------NKEVAKVVRMNEEEYKKCV 173
>gi|406957539|gb|EKD85450.1| hypothetical protein ACD_38C00020G0002 [uncultured bacterium]
Length = 433
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 163/364 (44%), Gaps = 24/364 (6%)
Query: 393 LYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAWIELD 452
L ++PY +Y + L ++ L++A +++ + + L +A L NY + AW+++
Sbjct: 82 LVAIPYHIKYAAPLKPVADKLNEAANISDNKEFGKALKIQAKVLLDGNYEKAWEAWLKMK 141
Query: 453 -SELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAY 511
+ LD++IGP + F KA + A++G+ + + T + +N + + +
Sbjct: 142 PNSLDISIGPLHHLANQFFFPKAAYHAWVGVMEKEGTIRF----NNYKTVTLSARRKTLT 197
Query: 512 KSKDVIAAPIRVIQL--IYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK 569
+ + A I+ I L + +G + + V LP D +V+ G + ++ + K
Sbjct: 198 PKERIDPASIKAIVLDAVLFAGIMARTKFVGLTLPIDVNVVEKYGVQATLFNQPNDLRLK 257
Query: 570 NILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELH 629
+ + P + K +E + + H + + + ++ L +
Sbjct: 258 DQILPTFNKIFSKGFKEGFSKEDLRRGYLRSAALHDLAHSYLYYKNAAKN-----LGDDF 312
Query: 630 SAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEE--------S 681
+ E A ++GL +L+ +D + + +++SM V+F++ RSV EE +
Sbjct: 313 YTVSELAATVLGLRLAGYLLLKDRITEKMLESMIVAFIS---RSVYLMREEDKDNKLMSN 369
Query: 682 HGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLL 741
+ G + N++FE A + D V+F KV ++ LS+ + ++ A G K A +
Sbjct: 370 YTLGSRIFMNFMFESGA-LKEFKDLIIVNFTKVFVSINDLSSMLESLLAHGTKVDAGSFV 428
Query: 742 QKYC 745
+KY
Sbjct: 429 KKYS 432
>gi|373500616|ref|ZP_09590993.1| hypothetical protein HMPREF9140_01111 [Prevotella micans F0438]
gi|371952778|gb|EHO70612.1| hypothetical protein HMPREF9140_01111 [Prevotella micans F0438]
Length = 654
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 155/358 (43%), Gaps = 36/358 (10%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW+ E + +D G E Y D + G KA++E + +D KAT + +L N Q E +
Sbjct: 273 IAWLNEKEGLVDFINGFIEVYSDPM-GLKASWEGIVQYKDTKATGRTQLISQNAQWFEDH 331
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P++ ++ V V+ GD + NLPN I + G+ V + N++
Sbjct: 332 SPINPQFRKPIVKGITASVVCAAMLGGDEYPSSAIGINLPNSNWIRAEYGSKSVTISNLT 391
Query: 565 E----AKFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECCHGIGPHSITLPDGR 617
A N L+ + I K+ +++ S T H HEC +G S L G
Sbjct: 392 HAYNMAAKGNGLK--EEFVINKQTINIINQYSDKTDALHTDLHEC---LGHGSGRLMPGI 446
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLL--PKSLVKSMYVSFLAGCFRS 673
S L+ + +EEA+AD+ GL+ + L+ LL P++ Y + G
Sbjct: 447 DSDA---LKNYGNTIEEARADLFGLYYIADPKLLELGLLDNPEAYKAQYYCYMMNGLLTQ 503
Query: 674 ---VRFG--LEESHGKGQALQFNWLFE-------KEAFILHSDDTFSV-DFDKVEGAVES 720
+ G +EESH + +AL W E E L+ + +++++
Sbjct: 504 LARIEQGKQIEESHMQNRALITRWALELGQPKNVAEMIRLNGKTYLQINNYEELRNIFAH 563
Query: 721 LSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 778
+EI I+++GD AA L++KY P Q++ ++IAP +N +L
Sbjct: 564 ELSEIQRIKSQGDFYAARSLVEKYAIKIDP--ELHQEIITRYTKLNIAPYKGFINPIL 619
>gi|423099431|ref|ZP_17087138.1| hydrolase, NUDIX family [Listeria innocua ATCC 33091]
gi|370794055|gb|EHN61845.1| hydrolase, NUDIX family [Listeria innocua ATCC 33091]
Length = 169
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + T T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTRKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE++EELG I+L +F + F F
Sbjct: 61 DLSAAGSALKGETSRQAAEREVKEELGMTIDLSNTRAKFSYHF------------EAGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + L TLQ EV+ V+++ EE + L + F+PY
Sbjct: 109 DYWFIT--KDVELSDLTLQTEEVADVRFVTKEELEAL--RSSGEFIPY 152
>gi|423460091|ref|ZP_17436888.1| hypothetical protein IEI_03231 [Bacillus cereus BAG5X2-1]
gi|401141659|gb|EJQ49212.1| hypothetical protein IEI_03231 [Bacillus cereus BAG5X2-1]
Length = 202
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIKEELGLSFQTTELAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKREISSFTAISV 165
>gi|387133578|ref|YP_006299550.1| peptidase family M49 domain protein [Prevotella intermedia 17]
gi|386376426|gb|AFJ09689.1| peptidase family M49 domain protein [Prevotella intermedia 17]
Length = 656
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 33/305 (10%)
Query: 413 LHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDVTIGPYETYEDA 468
L+KA + K ++ + S N D D I W+ E + ++D G E Y DA
Sbjct: 234 LNKAIAYCENNDQKEIIRLLIAYYTSGNLADFDKYSIKWVTECNGQVDFINGFIEVYGDA 293
Query: 469 IFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIY 528
+ G K ++E + ++ +AT + + N Q E + P+D +K + V V+
Sbjct: 294 L-GLKGSWEGIVHYKNLEATKRTQTISTNAQWFENHSPVDKRFKKEVVKGVTANVVCAAM 352
Query: 529 NSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNILRP--IADVCIRKEQQE 586
GD + NLPN + I + G+ V + N++ A + I + I + +E
Sbjct: 353 LGGDEYPASAIGINLPNADWIRAEYGSKSVTISNLTHAYDRAAKGNGFIEEFVIDAQTRE 412
Query: 587 LVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGL 642
L+D T H HEC HG G LPD + L+ + +EEA+AD+ GL
Sbjct: 413 LIDTYGNLTDELHTDLHECLGHGSGK---LLPDTDPDS----LKNYGNTIEEARADLFGL 465
Query: 643 WALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS--VRFG----LEESHGKGQALQF 690
+ ++ + LL L+ K+ Y S++ + R +EESH + +AL
Sbjct: 466 Y---YMADKKLLELGLLNSEEAFKAQYYSYIMNGLMTQLARIKPDKQIEESHMQNRALIA 522
Query: 691 NWLFE 695
W +E
Sbjct: 523 WWAYE 527
>gi|339626598|ref|YP_004718241.1| MutT/nudix family protein [Sulfobacillus acidophilus TPY]
gi|379006050|ref|YP_005255501.1| NUDIX hydrolase [Sulfobacillus acidophilus DSM 10332]
gi|339284387|gb|AEJ38498.1| MutT/nudix family protein [Sulfobacillus acidophilus TPY]
gi|361052312|gb|AEW03829.1| NUDIX hydrolase [Sulfobacillus acidophilus DSM 10332]
Length = 205
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ ++ G+ K R VHR GD+HRT + WI S LL Q R+ K +P +
Sbjct: 2 EWLDIYDENFERVGV-KERQAVHRDGDWHRTFHGWI-VRSDGLLLFQLRSATKADYPNRF 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+++AGH +AG++ L + RE+ EELGI++ D + + ++ V I+ EF++V
Sbjct: 60 DVTAAGHYAAGETGL-AGLREVTEELGIHVNPDQLQ--YGGIRVRVRRQPGLIDREFSEV 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
Y + + P A+ + EV + I ++
Sbjct: 117 YFIR--DDRPWSAYHPARQEVDGLLAITIDD 145
>gi|89897078|ref|YP_520565.1| hypothetical protein DSY4332 [Desulfitobacterium hafniense Y51]
gi|219667051|ref|YP_002457486.1| NUDIX hydrolase [Desulfitobacterium hafniense DCB-2]
gi|423071862|ref|ZP_17060628.1| hydrolase, NUDIX family [Desulfitobacterium hafniense DP7]
gi|89336526|dbj|BAE86121.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537311|gb|ACL19050.1| NUDIX hydrolase [Desulfitobacterium hafniense DCB-2]
gi|361857417|gb|EHL09254.1| hydrolase, NUDIX family [Desulfitobacterium hafniense DP7]
Length = 173
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG T R GDYH ++ IF S ELL+Q+R +K WP MWDI+ G AG+
Sbjct: 15 TGRTMERGSQFAKGDYHLVIHVCIF-NSKNELLIQKRQPWKKGWPNMWDITVGGSALAGE 73
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+S +A+RE EE+G + A FT +N F D YLV I +
Sbjct: 74 TSAEAAERETFEEIGYKIDLSAERPFFT------VN----FERGFDDYYLVE--RDIDIN 121
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQR 190
LQ EV VK+ + +E L+ ++ F+ Y QLF+I R
Sbjct: 122 GLCLQYEEVQCVKWASKDEIMQLI--EEGQFIGYWF---MEQLFDIRKHR 166
>gi|293401337|ref|ZP_06645481.1| MutT/NUDIX family protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305463|gb|EFE46708.1| MutT/NUDIX family protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 173
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ D+ T G TG R + +GDYH ++ I + + LLLQ+R+D K+S+PG W
Sbjct: 2 EYWDIYTQDGICTGRKVKRGDAMAIGDYHLVIHLLILGKDGR-LLLQKRSDQKESFPGYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D G +G+++ AQRELQEELGI++ + V Q+ + D F ++A
Sbjct: 61 DFGIGGSAVSGENARQCAQRELQEELGIHMDFQQRKPVLRSYGQHSLVD--FFTIDYAG- 117
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L TLQ+ EVS V + A E +L+ K F+PY
Sbjct: 118 ---------ELADLTLQKEEVSDVCW-ADLETVHLMCKQK-IFIPY 152
>gi|225388031|ref|ZP_03757755.1| hypothetical protein CLOSTASPAR_01765 [Clostridium asparagiforme
DSM 15981]
gi|225045884|gb|EEG56130.1| hypothetical protein CLOSTASPAR_01765 [Clostridium asparagiforme
DSM 15981]
Length = 341
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDSWP 65
E DV G TG+ + R VH GD H T + W+ A ++LLQ+R+ KDS+P
Sbjct: 158 ELFDVRDSEGNVTGVARERELVHLNGDPHGTSHIWVVRANASGGWDVLLQKRSRDKDSYP 217
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV-FTFLQQNVINDGK-FINN 123
G +D+SSAGH+ AGD L +A REL+EELG++ + EFV F + + G+ F ++
Sbjct: 218 GCYDVSSAGHLQAGDDFLPAALRELEEELGLHARAEDLEFVGFHKAYRKAVFGGRLFKDH 277
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYI 155
E + VY+ P+ A LQ+ E+ +V ++
Sbjct: 278 EISAVYIYR--KPVETSALRLQKEELESVMWM 307
>gi|163757021|ref|ZP_02164127.1| putative dipeptidyl-peptidase III [Kordia algicida OT-1]
gi|161323025|gb|EDP94368.1| putative dipeptidyl-peptidase III [Kordia algicida OT-1]
Length = 686
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 26/321 (8%)
Query: 446 IAW-IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I+W + +D G E Y D GY+ ++E + ++D + ++ + +N Q E N
Sbjct: 298 ISWATSTEGNIDWINGFIEVYNDPK-GYRGSYETIVQVKDVDMSKKMAVLSENAQWFEDN 356
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+ +++K K+V+ + I + +GD + NLPN+ I ++ G+ V L N+
Sbjct: 357 SPLIDSHKKKNVVGVSYKSINVAGEAGDASPKTPIGVNLPNNNWIRQEHGSKSVSLANII 416
Query: 565 EAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLE 624
A +N + +++ ++ + H H + H+ + +
Sbjct: 417 NAYGQNGGSGRLKEFVHDDEELQLELKYGKLADKLHTSLHEVIGHASGQINPGIGQPKET 476
Query: 625 LQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV-------KSMYVSFLAGCFRS--VR 675
L+ S +EE +AD+VGL+ +L+ L LV K+ Y ++ + VR
Sbjct: 477 LKNYASTLEEGRADLVGLY---YLMDPKLKELGLVEDTEGVGKAAYDGYIRNGLMTQLVR 533
Query: 676 FGL----EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVESLST 723
L EE H + W+FEK E + + D+ K+ L
Sbjct: 534 LKLGDDVEEDHMVNRQWVSAWVFEKGQKDNVIEKVTRDGKTYYDIKDYVKLRELFGELLR 593
Query: 724 EILTIQARGDKEAASLLLQKY 744
E I++ GD EAA L++ Y
Sbjct: 594 ETQRIKSEGDFEAARALVEGY 614
>gi|373452952|ref|ZP_09544858.1| hypothetical protein HMPREF0984_01900 [Eubacterium sp. 3_1_31]
gi|371964700|gb|EHO82207.1| hypothetical protein HMPREF0984_01900 [Eubacterium sp. 3_1_31]
Length = 173
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ D+ T G TG R + +GDYH ++ I + + LLLQ+R+D K+S+PG W
Sbjct: 2 EYWDIYTQDGICTGRRVKRGDAMAIGDYHLVIHLLILGKDGR-LLLQKRSDQKESFPGYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D G +G+++ AQRELQEELGI + + V Q+ + D F ++A
Sbjct: 61 DFGIGGSAVSGENARQCAQRELQEELGIYMDFQQRKPVLRSYGQHSLVD--FFTIDYAG- 117
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L TLQ+ EVS V + A E +L+ K F+PY
Sbjct: 118 ---------GLADLTLQKEEVSGVCW-ADLETVHLMCKQG-IFIPY 152
>gi|298207983|ref|YP_003716162.1| dipeptidyl-peptidase III [Croceibacter atlanticus HTCC2559]
gi|83850624|gb|EAP88492.1| putative dipeptidyl-peptidase III [Croceibacter atlanticus
HTCC2559]
Length = 671
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 177/451 (39%), Gaps = 71/451 (15%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSL---SGHIVDATNHS 386
NFY PD+ + E + S T E E L++ L +G +V+ T S
Sbjct: 188 NFYGPDVTTADVEQFYGSKTVDANEPI-----------ELGLNTKLVKENGKLVEKTYKS 236
Query: 387 VGSIYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD- 445
G Y + L KA +A + + + L D + + + D
Sbjct: 237 GGL------------YGEAIDEVIGWLEKAKGVAENENQAKALGLLIDYYKTGSLDTWDE 284
Query: 446 --IAWIE-LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLE 502
IAW+ + ++D G E Y D GYK ++E+ + I+D + ++ + + Q E
Sbjct: 285 YAIAWVNSTEGDIDWINGFIEVYNDPK-GYKGSYESIVQIKDFDMSKKMAVLSKDAQWFE 343
Query: 503 QNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKN 562
N P+ +K +V + + + +GD + NLPN+ I + G+ V L N
Sbjct: 344 DNSPLMAEHKKAEVKGVSYKTVIVAGEAGDASPSTPIGVNLPNNNWIRQAHGSKSVSLGN 403
Query: 563 VSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLP 614
+ A + + +V + KE + D H H + H+
Sbjct: 404 IINAYNGAGGSGRLEEFANDSLEVALEKEYGKQAD--------KLHTALHEVVGHASGQI 455
Query: 615 DGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV-------KSMYVSFL 667
+ T + L+ S +EE +AD+ GL+ +L+ L L K+ Y ++
Sbjct: 456 NPGVGTPKETLKSYKSTIEEGRADLFGLY---YLMDPKLQELGLTDNWEKTGKAAYDGYI 512
Query: 668 AGCFRS--VRFGL----EESHGKGQALQFNWLFEKE----AFILHSDDT---FSV-DFDK 713
+ +R L EE+H + + W+FEK A ++ D F + D+ K
Sbjct: 513 RNGMMTQLIRLELGDDVEEAHMRNRQWVSAWVFEKAQESGAVVMEQRDGKTYFDIKDYSK 572
Query: 714 VEGAVESLSTEILTIQARGDKEAASLLLQKY 744
+ L E I + GD EAA L++ Y
Sbjct: 573 MRELFGELLKETQRITSEGDYEAAKALVEDY 603
>gi|295704037|ref|YP_003597112.1| hypothetical protein BMD_1909 [Bacillus megaterium DSM 319]
gi|294801696|gb|ADF38762.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 209
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKD 62
++ +E L V ++ G T R EVH G +H + W + + Q R++ K
Sbjct: 1 MMNDEVLTVFNEQQERIG-TASRKEVHEKGYWHEAFHCWFVSRENDIDYIYFQIRSEQKQ 59
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGIN------LPKDAFEFVFTFLQQNVIN 116
+PG DI++AGH+ +++ + RE+ EELG+N LP D F++ ++
Sbjct: 60 DYPGALDITAAGHLLHTETA-VDGVREIHEELGVNISFDELLPLDVFKY--------EVS 110
Query: 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
+ +I+ EFA V+L + + PL AFTLQQ EVS +
Sbjct: 111 EPHYIDKEFAHVFLYYSSH--PLNAFTLQQEEVSGL 144
>gi|407704405|ref|YP_006827990.1| M23/M37 family peptidase [Bacillus thuringiensis MC28]
gi|407382090|gb|AFU12591.1| MutT/nudix [Bacillus thuringiensis MC28]
Length = 201
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + + I+D + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQRTDLAYKGIYKIDYEISD--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
EV V + + LL ++ SF
Sbjct: 135 ---GDEVDDVMKVHATAFLQLLKREISSF 160
>gi|42781117|ref|NP_978364.1| mutT/nudix family protein [Bacillus cereus ATCC 10987]
gi|42737038|gb|AAS40972.1| mutT/nudix family protein [Bacillus cereus ATCC 10987]
Length = 202
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQE---LLLQRRADFKDSWPGMWDISSAGHISAGDS 81
K R EVHR GD+H T + W F E +E L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCW-FVEKDEEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDED 76
Query: 82 SLISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ A++ +FT + + N + EF +Y +NP+P
Sbjct: 77 VQIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVINPLPF 132
Query: 140 EAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ SF V
Sbjct: 133 AP----GEEVDDVMKIHATSFLKLLKREISSFTAISV 165
>gi|30020101|ref|NP_831732.1| phosphohydrolase (MutT/nudix family protein) [Bacillus cereus ATCC
14579]
gi|229127397|ref|ZP_04256392.1| MutT/nudix [Bacillus cereus BDRD-Cer4]
gi|229144607|ref|ZP_04273009.1| MutT/nudix [Bacillus cereus BDRD-ST24]
gi|423654779|ref|ZP_17630078.1| hypothetical protein IKG_01767 [Bacillus cereus VD200]
gi|29895651|gb|AAP08933.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus cereus ATCC
14579]
gi|228638847|gb|EEK95275.1| MutT/nudix [Bacillus cereus BDRD-ST24]
gi|228656079|gb|EEL11922.1| MutT/nudix [Bacillus cereus BDRD-Cer4]
gi|401294284|gb|EJR99912.1| hypothetical protein IKG_01767 [Bacillus cereus VD200]
Length = 202
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + T+++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDTEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|282859669|ref|ZP_06268771.1| peptidase family M49 [Prevotella bivia JCVIHMP010]
gi|424899157|ref|ZP_18322703.1| Peptidase family M49 [Prevotella bivia DSM 20514]
gi|282587587|gb|EFB92790.1| peptidase family M49 [Prevotella bivia JCVIHMP010]
gi|388593371|gb|EIM33609.1| Peptidase family M49 [Prevotella bivia DSM 20514]
Length = 659
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 50/366 (13%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E + +D G E Y D + G KA++E + +D +AT + + N Q E +
Sbjct: 278 IEWLKEQEGRVDFINGFIEVYGDPL-GLKASWEGIVEYKDLEATQRTQTISTNAQWFEDH 336
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P+D ++ + V VI GD + NLPN + I + G+ V + N++
Sbjct: 337 SPVDPRFRKERVKGVTANVINAAMLGGDEYPSTAIGINLPNADWIRAEHGSKSVTIGNLT 396
Query: 565 EAKFKNILRP----IADVCIRKEQQELVDFDSFFT---HNICHECC-HGIGP-HSITLPD 615
A N+ + + I E E++ T H HEC HG G T PD
Sbjct: 397 HA--YNMASHGNGFLEEFVIDNETLEIITTFGDKTDDLHTDLHECLGHGSGKLLQGTDPD 454
Query: 616 GRQSTVRLELQELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCF- 671
L+ + +EEA+AD+ GL+ + K L L K K+ Y S+L
Sbjct: 455 A--------LKNYGNTIEEARADLFGLYYIADAKLLELGLLDSKEAYKAQYYSYLMNGLL 506
Query: 672 -RSVR----FGLEESHGKGQALQFNWLFE--KEA----FILHSDDTFSV--DFDKVEGAV 718
+ VR +EESH + +AL W + KE F+ + T+ D+ +
Sbjct: 507 TQQVRIKPNMKIEESHMQNRALIAWWAMDLGKEKNIIEFVTRNSKTYIKINDYTALRSIF 566
Query: 719 ESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQV-----PVDIAPTFTA 773
+ EI I++ GD AA L++KY + L K ++ +V ++IAP
Sbjct: 567 ATELAEIQRIKSEGDFNAARTLVEKYA-------IHLNKDQHEEVLARYKQLNIAPYKGF 619
Query: 774 VNKLLQ 779
+N +L+
Sbjct: 620 INPVLK 625
>gi|260911608|ref|ZP_05918193.1| M49 family peptidase [Prevotella sp. oral taxon 472 str. F0295]
gi|260634314|gb|EEX52419.1| M49 family peptidase [Prevotella sp. oral taxon 472 str. F0295]
Length = 659
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 215/539 (39%), Gaps = 85/539 (15%)
Query: 286 DENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKME-FELW 344
D +EAF SAVK +P P+ G+ ++ P P ++K + +L
Sbjct: 118 DFSEAFFR---SAVKQVPIDKLPMAGYSSVDELCDEICPVMFNPEILPKRVNKADGVDLV 174
Query: 345 KSSLTEK----QQEDATSFFTVIKRRSEFNLDS-SLSGHIVDATNHSVGSIYDLYSVPYS 399
K+S QE+A F+ K + N S L+ +V N L +S
Sbjct: 175 KTSACNYYAGVSQEEAEHFYNEKKVDAGDNSPSWGLNTKLVKGEN-------GLEERVWS 227
Query: 400 E--EYNSYLTRASELLHKAGDMASSPSLKRLL------HSKADAFLSNNYYDSDIAWI-E 450
E EY + L +A ++A + + ++ + D L + Y I W+ E
Sbjct: 228 ENGEYGEAIRHIIYWLEQAKNVAENSQQQLVIDLLIRYYRTGDLHLFDEY---SIEWLKE 284
Query: 451 LDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNA 510
D +D G E Y D + G KA++E + +D +AT + +L DN Q E + P+D
Sbjct: 285 QDGNVDFINGFIEVYGDPL-GIKASWEGIVEYKDLEATRRTRLISDNAQWFEDHSPVDQR 343
Query: 511 YKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK- 569
+K V V+ GD + NLPN + I G+ V + N+++A K
Sbjct: 344 FKKAVVRGVTANVVCAAMLGGDEYPSTAIGINLPNADWIRAQHGSKSVTISNITDAYNKA 403
Query: 570 -----------------NILRPIADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSI 611
N++ D+C D H HEC HG G
Sbjct: 404 AKNNGFKEEFVIDAETLNMVSLYGDIC-----------DDL--HTDLHECLGHGSGQ--- 447
Query: 612 TLPDGRQSTVRLELQELHSAMEEAKADIVGLWALK--FLIGRDLLP-KSLVKSMYVSFLA 668
LP L+ + +EEA+AD+ GL+ + L+ LLP K + S Y +++
Sbjct: 448 LLPGVSPDA----LKAYGNTIEEARADLFGLYYMADDKLLELGLLPDKEVFHSQYYTYMM 503
Query: 669 GCFRS--VRFGL----EESHGKGQALQFNWLFE--KEAFILHSDDTFSV----DFDKVEG 716
+ R L EE+H + +AL +W+ + K A L + + ++ ++
Sbjct: 504 NGLITQLTRIELDKDIEEAHMRNRALIAHWVLDHGKGAVELVKQEGKTYVRINNYGQLRH 563
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVN 775
L E+ I++ GD A L++ Y A + LE +DIAP +N
Sbjct: 564 LFGELLAEVQRIKSEGDFNTARNLVENYAVKVDRTLHA-EVLERF-AKLDIAPYKGFIN 620
>gi|294498716|ref|YP_003562416.1| hypothetical protein BMQ_1953 [Bacillus megaterium QM B1551]
gi|294348653|gb|ADE68982.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 209
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKD 62
++ +E L V ++ G T R EVH G +H + W + + Q R++ K
Sbjct: 1 MMNDEVLTVFNDQQERIG-TASRKEVHEKGYWHEAFHCWFVSRENDIDYIYFQIRSEQKQ 59
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGIN------LPKDAFEFVFTFLQQNVIN 116
+PG DI++AGH+ +++ + RE+ EELG+N LP D F++ ++
Sbjct: 60 DYPGALDITAAGHLLHTETA-VDGVREIHEELGVNISFDELLPLDVFKY--------EVS 110
Query: 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
+ +I+ EFA V+L + + PL AFTLQQ EVS +
Sbjct: 111 EPHYIDKEFAHVFLYYSSH--PLNAFTLQQEEVSGL 144
>gi|296502584|ref|YP_003664284.1| MutT/NUDIX family protein phosphohydrolase [Bacillus thuringiensis
BMB171]
gi|296323636|gb|ADH06564.1| phosphohydrolase (MutT/nudix family protein) [Bacillus
thuringiensis BMB171]
Length = 202
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + T+++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDTEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|332290678|ref|YP_004429287.1| Dipeptidyl-peptidase III [Krokinobacter sp. 4H-3-7-5]
gi|332168764|gb|AEE18019.1| Dipeptidyl-peptidase III [Krokinobacter sp. 4H-3-7-5]
Length = 674
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 170/448 (37%), Gaps = 59/448 (13%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGS 389
NFY PD+ E A +F+ IK ++ L+ +V V
Sbjct: 192 NFYGPDVTTAE---------------AEAFYDAIKVDENEPIEKGLNTRLVKENGKLVEQ 236
Query: 390 IYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSDIAW- 448
+Y + Y E ++ + + A + +L L+ L + + D IAW
Sbjct: 237 VYKSGGL-YGEAIDNIIGWLEKAQTVAENEQQGKALGLLIEYYKTGSL-DTWDDYCIAWA 294
Query: 449 IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMD 508
+ +D G E Y D GYK ++E + I+D + ++ + Q E N P+
Sbjct: 295 TSTEGNIDWINGFIEVYNDPK-GYKGSYETVVQIKDFDMSKKMAALSVDAQWFEDNSPLM 353
Query: 509 NAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA-- 566
+K K+V + + + +GD + NLPN+ I + G+ V L N+ A
Sbjct: 354 PEHKKKEVKGVSYKTVIVAGEAGDASPSTPIGVNLPNNNWIRQTHGSKSVSLGNIINAYN 413
Query: 567 ------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQST 620
+ K +V + ++ +L D H H + H+ + T
Sbjct: 414 NAGGSGRLKEFAHDAEEVELEEQYGQLGD--------KLHTALHEVVGHASGQINKGVGT 465
Query: 621 VRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGL-- 678
+ L+ S +EE +AD+ GL+ +L+ L LV+ + +A +R GL
Sbjct: 466 PKETLKRYKSTIEEGRADLFGLY---YLMDPKLQEIGLVEDWEKTGMAAYDGYIRNGLMT 522
Query: 679 -----------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVE 719
EE+H + W FE+ E F++ D+ K+
Sbjct: 523 QLIRLELGDNVEEAHMVNRQWVSAWAFERGAKENVIEKVTRDGKTYFNITDYTKLRAIFG 582
Query: 720 SLSTEILTIQARGDKEAASLLLQKYCTM 747
L E I + GD EAA L++ Y +
Sbjct: 583 ELLRETQRITSEGDYEAAKALVENYGVI 610
>gi|451819277|ref|YP_007455478.1| isopentenyldiphosphate isomerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785256|gb|AGF56224.1| isopentenyldiphosphate isomerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 198
Score = 76.3 bits (186), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDS 63
+ +E L V ++ GI R E+H+ G H+ V+ WI E L Q+R+ K
Sbjct: 1 MMKELLTVYNEQLEEVGILS-RDEIHKKGLKHKVVHCWIIERGEIGIYLYFQQRSFNKSD 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV---FTFLQQNVINDGKF 120
+PGM+DI+ AGHI AG+ + I+ REL EE+G+N+ K+ +++ F Q+ G+F
Sbjct: 60 FPGMYDIACAGHIDAGEEAEIAMIRELDEEIGLNINKNDLKYLGRKFEAFQK-----GEF 114
Query: 121 INNEFADVYLV 131
+NE ++YL+
Sbjct: 115 FDNEICEMYLL 125
>gi|451981976|ref|ZP_21930312.1| NUDIX hydrolase [Nitrospina gracilis 3/211]
gi|451760817|emb|CCQ91588.1| NUDIX hydrolase [Nitrospina gracilis 3/211]
Length = 169
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R EVH G HR+V+ +F E EL LQ+RA KD PG WD S+AGH+SAGD ++A
Sbjct: 23 RREVHARGLLHRSVHILVFNEKG-ELFLQKRAMSKDENPGYWDTSAAGHVSAGDDYRVTA 81
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQ 146
REL EELGI E + FL+ + + E + Y T I +
Sbjct: 82 HRELDEELGIR------ENLKPFLRIQACAETFW---EHVECYTCITRQRIRINPH---- 128
Query: 147 TEVSAVKYIAYEEYKNLLAKDDPSFV 172
E+ +Y + E + L P+F
Sbjct: 129 -EIEEGRYWSIREIQQALQTGRPAFT 153
>gi|229115481|ref|ZP_04244887.1| MutT/nudix [Bacillus cereus Rock1-3]
gi|423380194|ref|ZP_17357478.1| hypothetical protein IC9_03547 [Bacillus cereus BAG1O-2]
gi|423545279|ref|ZP_17521637.1| hypothetical protein IGO_01714 [Bacillus cereus HuB5-5]
gi|423625006|ref|ZP_17600784.1| hypothetical protein IK3_03604 [Bacillus cereus VD148]
gi|228667894|gb|EEL23330.1| MutT/nudix [Bacillus cereus Rock1-3]
gi|401182747|gb|EJQ89877.1| hypothetical protein IGO_01714 [Bacillus cereus HuB5-5]
gi|401255376|gb|EJR61597.1| hypothetical protein IK3_03604 [Bacillus cereus VD148]
gi|401630946|gb|EJS48743.1| hypothetical protein IC9_03547 [Bacillus cereus BAG1O-2]
Length = 202
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + + I+D + EF +Y + P+P
Sbjct: 78 EIGGLREIEEELGLSFQRTDLAYKGIYKIDYEISD--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
EV V + + LL ++ SF
Sbjct: 135 ---GDEVDDVMKVHATAFLQLLKREISSF 160
>gi|16799464|ref|NP_469732.1| hypothetical protein lin0387 [Listeria innocua Clip11262]
gi|27734609|sp|Q92ES1.1|Y387_LISIN RecName: Full=Uncharacterized Nudix hydrolase lin0387
gi|16412816|emb|CAC95620.1| lin0387 [Listeria innocua Clip11262]
Length = 169
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L + T T R E G+ H V+ IF E Q LL+Q+R K+ WP W
Sbjct: 2 EEWDLLNENRELTRKTHIRGEKLAPGELHLVVHVCIFNEKGQ-LLIQKRQKDKEGWPNYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D+S+AG G++S +A+RE++EELG I+L +F + F F
Sbjct: 61 DLSAAGSALKGETSRQAAEREVKEELGMTIDLSNTRAKFSYHF------------EAGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D + +T + L TLQ EV+ V+++ E+ + L + F+PY
Sbjct: 109 DYWFIT--KDVELSDLTLQTEEVADVRFVTKEKLEAL--RSSGEFIPY 152
>gi|206977488|ref|ZP_03238383.1| mutT/nudix family protein [Bacillus cereus H3081.97]
gi|217959471|ref|YP_002338023.1| mutT/nudix family protein [Bacillus cereus AH187]
gi|229138696|ref|ZP_04267278.1| MutT/nudix [Bacillus cereus BDRD-ST26]
gi|375283978|ref|YP_005104416.1| mutT/nudix family protein [Bacillus cereus NC7401]
gi|423356135|ref|ZP_17333758.1| hypothetical protein IAU_04207 [Bacillus cereus IS075]
gi|423371972|ref|ZP_17349312.1| hypothetical protein IC5_01028 [Bacillus cereus AND1407]
gi|423569094|ref|ZP_17545340.1| hypothetical protein II7_02316 [Bacillus cereus MSX-A12]
gi|206744338|gb|EDZ55750.1| mutT/nudix family protein [Bacillus cereus H3081.97]
gi|217063740|gb|ACJ77990.1| mutT/nudix family protein [Bacillus cereus AH187]
gi|228644815|gb|EEL01065.1| MutT/nudix [Bacillus cereus BDRD-ST26]
gi|358352504|dbj|BAL17676.1| mutT/nudix family protein [Bacillus cereus NC7401]
gi|401080006|gb|EJP88297.1| hypothetical protein IAU_04207 [Bacillus cereus IS075]
gi|401101056|gb|EJQ09049.1| hypothetical protein IC5_01028 [Bacillus cereus AND1407]
gi|401207878|gb|EJR14656.1| hypothetical protein II7_02316 [Bacillus cereus MSX-A12]
Length = 202
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYTGIFTINYEISN--LTDREFCHMYFHNVINPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKIHATSFLQLLKREISSFTAISV 165
>gi|56965755|ref|YP_177489.1| hypothetical protein ABC3997 [Bacillus clausii KSM-K16]
gi|56912001|dbj|BAD66528.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 211
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPG 66
E L + QK G T R H G +H T + WI +S E + LQRR+ K +P
Sbjct: 4 ETLAIYNQAKQKVG-TATRKTAHENGLWHETFHCWIIDDSQIEPYIYLQRRSAHKKDFPS 62
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
++DI++AGH+ G+++ RE++EELGI++P +F+ F + + + EFA
Sbjct: 63 LFDITAAGHLLEGETAE-DGIREVKEELGIDIPIADLDFLGQF--RCMPKHRDIYDYEFA 119
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
Y+ IP E F LQ+ EV+ + + + + L
Sbjct: 120 FTYVYR--QHIPFEQFRLQEEEVAGMVRVPFSAFYQL 154
>gi|325285221|ref|YP_004261011.1| NUDIX hydrolase [Cellulophaga lytica DSM 7489]
gi|324320675|gb|ADY28140.1| NUDIX hydrolase [Cellulophaga lytica DSM 7489]
Length = 182
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E +D+L G+KTG T +SE H+ G +H+T + W + + +E+LLQ+R+ KD +P +
Sbjct: 2 DELVDILDFKGKKTGKTALKSETHKNGWFHQTTHIWFYTKK-KEILLQQRSKNKDIFPLL 60
Query: 68 WDISSAGHISAGDSSLISAQR 88
WD+S AGHI AG+ + SA R
Sbjct: 61 WDVSVAGHIGAGEDIINSALR 81
>gi|456370973|gb|EMF49869.1| Putative Nudix hydrolase [Streptococcus parauberis KRS-02109]
Length = 192
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D+ + KTG T R + GD H V+ IF + ELL+Q+R K+ +P MWDIS
Sbjct: 6 DIYDIYRNKTGRTMERGSNFKEGDLHLVVHLCIF-NTNGELLIQQRQKDKEGFPNMWDIS 64
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
G AG++ + RE EELGI + FT IN + F D +LV
Sbjct: 65 VGGSALAGETPQQAVMRETLEELGICIDLSQIRPQFT------IN----FDQGFDDTFLV 114
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY---------DVNGGYGQ 182
+ + L + TLQ+ EV K+ + +E ++ + SF+PY D+ G YG
Sbjct: 115 --IADVDLNSLTLQEEEVQDAKWASRQEIFKMMTEG--SFIPYHLGKIQLCFDMLGQYGA 170
Query: 183 LFNIIS 188
N I
Sbjct: 171 HVNGIG 176
>gi|423576272|ref|ZP_17552391.1| hypothetical protein II9_03493 [Bacillus cereus MSX-D12]
gi|401207268|gb|EJR14047.1| hypothetical protein II9_03493 [Bacillus cereus MSX-D12]
Length = 202
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QSGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ PSF V
Sbjct: 135 ---GEEVDDVMKIHATSFLQLLKREIPSFTATSV 165
>gi|47569999|ref|ZP_00240662.1| phosphohydrolase [Bacillus cereus G9241]
gi|229155579|ref|ZP_04283687.1| MutT/nudix [Bacillus cereus ATCC 4342]
gi|47553347|gb|EAL11735.1| phosphohydrolase [Bacillus cereus G9241]
gi|228627897|gb|EEK84616.1| MutT/nudix [Bacillus cereus ATCC 4342]
Length = 202
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDPLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL +++ SF V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKRENSSFTAISV 165
>gi|229196212|ref|ZP_04322961.1| MutT/nudix [Bacillus cereus m1293]
gi|228587277|gb|EEK45346.1| MutT/nudix [Bacillus cereus m1293]
Length = 202
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QSGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ PSF V
Sbjct: 135 ---GEEVDDVMKIHATSFLQLLKREIPSFTATSV 165
>gi|423481861|ref|ZP_17458551.1| hypothetical protein IEQ_01639 [Bacillus cereus BAG6X1-2]
gi|401145069|gb|EJQ52596.1| hypothetical protein IEQ_01639 [Bacillus cereus BAG6X1-2]
Length = 202
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPG 66
E L + G G K R EVHR GD+H T + W + +++ L Q R+ K PG
Sbjct: 3 EWLTIFDTEGNTLG-KKLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+WDI+SAGHI + I RE++EELG++ + F +++ + EF
Sbjct: 62 IWDITSAGHIMHDEDVQIGGLREIEEELGLSFQTTDLAYKGIFKIDYELSN--LTDREFC 119
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
+Y L P+P EV V + + LL +D
Sbjct: 120 HMYFHNVLKPLPFAP----GEEVDDVMKVHATTFLQLLKRD 156
>gi|329116937|ref|ZP_08245654.1| hydrolase, NUDIX family [Streptococcus parauberis NCFD 2020]
gi|326907342|gb|EGE54256.1| hydrolase, NUDIX family [Streptococcus parauberis NCFD 2020]
Length = 192
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D+ + KTG T R + GD H V+ IF + ELL+Q+R K+ +P MWDIS
Sbjct: 6 DIYDIYRNKTGRTMERGSNFKEGDLHLVVHLCIF-NTNGELLIQQRQKDKEGFPNMWDIS 64
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
G AG++ + RE EELGI + FT IN + F D +LV
Sbjct: 65 VGGSALAGETPQQAVMRETLEELGICIDLSQIRPQFT------IN----FDQGFDDTFLV 114
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY---------DVNGGYGQ 182
+ + L + TLQ+ EV K+ + +E ++ + SF+PY D+ G YG
Sbjct: 115 --IADVNLNSLTLQEEEVQDAKWASRQEIFKMMTEG--SFIPYHLGKIQLCFDMLGQYGA 170
Query: 183 LFNIIS 188
N I
Sbjct: 171 HVNGIG 176
>gi|402300825|ref|ZP_10820273.1| hypothetical protein BalcAV_16703 [Bacillus alcalophilus ATCC
27647]
gi|401724023|gb|EJS97425.1| hypothetical protein BalcAV_16703 [Bacillus alcalophilus ATCC
27647]
Length = 204
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPG 66
E+L V + GI K R EVHR G +H T + W E + + Q R+ K +P
Sbjct: 2 EYLQVFNDIREPVGI-KSRDEVHRFGYWHETFHCWFVGEEADKPVIYFQLRSKLKQDYPE 60
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN------LPKDAFEFVFTFLQQNVINDGKF 120
++DI++AGH+ AG+ ++ RE+ EELGI +P ++ T ++N F
Sbjct: 61 LFDITAAGHLLAGE-TINDGIREVHEELGIEVKMEDLIPLGVLDYCAT--KEN------F 111
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
I+ E A V+L T F LQ+ EVS V ++++NL K++
Sbjct: 112 IDKEIAHVFLYTFAG--SWSDFDLQEEEVSGVYRAYLDDFENLCLKNE 157
>gi|255307402|ref|ZP_05351573.1| NUDIX-family protein [Clostridium difficile ATCC 43255]
Length = 168
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG R G YH V WI ++Q +L+Q+R+ K + P MW
Sbjct: 2 ELWDLYNADGIKTGNVIKRGNSIEEGYYHLAVEVWILNSNSQ-ILIQKRSKSKKTLPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G I +G++SL A RE +EE+GI++ KD + + + ++ + DV
Sbjct: 61 GMTT-GCIVSGENSLEGAIREAKEEIGIDITKDEMKVFRSMIHEDTL----------WDV 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
YLV + LQ+ EVS +K+++ +E + LL
Sbjct: 110 YLVK--KEYDISKAILQEEEVSDIKWVSTDEIRQLL 143
>gi|222153063|ref|YP_002562240.1| NUDIX hydrolase [Streptococcus uberis 0140J]
gi|222113876|emb|CAR42036.1| putative NUDIX hydrolase [Streptococcus uberis 0140J]
Length = 175
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ D+ T Q TG R + G H V+ IF E Q +L+Q+R K+SWP W
Sbjct: 3 EYWDIYTKDRQLTGQKMIRGQAFPEGACHLVVHVCIFNEQGQ-MLIQQRHKTKESWPEYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A RE++EE+G++L FT IN +N F D
Sbjct: 62 DLTVGGSALAGETAQEAAMREVKEEIGLSLDLSETMPAFT------IN----FDNGFDDT 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+LV + I +E T EV VK+ +Y + ++ + F+PY
Sbjct: 112 FLV--VENITIENITFPDNEVQDVKWASYNDITQMI--NQGIFIPY 153
>gi|457095390|gb|EMG25885.1| Putative Nudix hydrolase [Streptococcus parauberis KRS-02083]
Length = 192
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D+ + KTG T R + GD H V+ IF + ELL+Q+R K+ +P MWDIS
Sbjct: 6 DIYDIYRNKTGRTMERGSNFKEGDLHLVVHLCIF-NTNGELLIQQRQKDKEGFPNMWDIS 64
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
G AG++ + RE EELGI + FT IN + F D +LV
Sbjct: 65 VGGSALAGETPQQAVMRETLEELGICIDLSQIRPQFT------IN----FDQGFDDTFLV 114
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY---------DVNGGYGQ 182
+ + L + TLQ+ EV K+ + +E ++ + SF+PY D+ G YG
Sbjct: 115 --IADVDLNSLTLQEEEVQDAKWASRKEIFKMMT--EGSFIPYHLGKIQLCFDMLGQYGA 170
Query: 183 LFNIIS 188
N I
Sbjct: 171 HVNGIG 176
>gi|429738287|ref|ZP_19272099.1| peptidase family M49 [Prevotella saccharolytica F0055]
gi|429160483|gb|EKY02944.1| peptidase family M49 [Prevotella saccharolytica F0055]
Length = 666
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 413 LHKAGDMASSPSLKRLL------HSKADAFLSNNYYDSDIAWI-ELDSELDVTIGPYETY 465
L KA +++ + K++L + D L + Y I W+ E + +D G E Y
Sbjct: 250 LEKAKEVSENVQQKKVLDLLIAYYRTGDLELFDRY---SIEWLNEHEGTVDFVNGFIEVY 306
Query: 466 EDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQ 525
D + G KA++E + +D +AT + + N Q E + P+D+ +K ++V V+
Sbjct: 307 GDPL-GLKASWEGIVEYKDWEATRRTQTISSNAQWFENHSPVDSRFKKENVRGVTANVVC 365
Query: 526 LIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFK----NILRPIADVCIR 581
GD + NLPN + I G+ V + N+++A K N + + +
Sbjct: 366 AAMLGGDEYPSTAIGINLPNADWIRAKYGSKSVTIGNLTDAYNKAARNNGFKE--EFVVD 423
Query: 582 KEQQELVDFDSFFT---HNICHECC-HGIGPHSITLPDGRQSTVRLELQELHSAMEEAKA 637
K L++ H HEC HG G LP L+ + +EEA+A
Sbjct: 424 KTTLTLIEKYGDLCDDLHTDLHECLGHGSGK---LLPGVNPDA----LKAYGNTIEEARA 476
Query: 638 DIVGLWALK--FLIGRDLLPK-SLVKSMYVSFLAGCFRS--VRF----GLEESHGKGQAL 688
D+ GL+ L L+ L P KS Y S++ + R +EE+H + +AL
Sbjct: 477 DLFGLYYLADPKLVELGLTPDIEAYKSQYYSYMMNGLMTQLTRIEPGKNIEEAHMRNRAL 536
Query: 689 QFNWLFEKEA----FILHSDDTFS--VDFDKVEGAVESLSTEILTIQARGDKEAASLLLQ 742
+W+ E+ + H+ T+ D+ + L EI I++ GD AA L++
Sbjct: 537 IAHWVLERGGDAVKMVQHNCKTYVEISDYACLRDLFAQLLAEIQRIKSEGDFLAARELVE 596
Query: 743 KY 744
+Y
Sbjct: 597 QY 598
>gi|163939808|ref|YP_001644692.1| NUDIX hydrolase [Bacillus weihenstephanensis KBAB4]
gi|163862005|gb|ABY43064.1| NUDIX hydrolase [Bacillus weihenstephanensis KBAB4]
Length = 202
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|410727423|ref|ZP_11365641.1| isopentenyldiphosphate isomerase [Clostridium sp. Maddingley
MBC34-26]
gi|410598831|gb|EKQ53396.1| isopentenyldiphosphate isomerase [Clostridium sp. Maddingley
MBC34-26]
Length = 196
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
RSE+H G H+ V+ WI +S E + Q+R+ K +PG++DIS+AGHI G+
Sbjct: 22 RSEIHSKGLLHQVVHCWIVDDSCNEKWIYFQQRSYKKKDFPGLYDISAAGHIDIGEDIEN 81
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
+ +RE+ EE+G+++ +++ ++ +++ F NNE +YL NP F
Sbjct: 82 AIKREVIEEIGLDIDTKKLKYIGNIREERRLSN--FHNNELCHLYLYNIKNP----KFIF 135
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGY 180
EV + I+ +E+K + + S + + ++ Y
Sbjct: 136 GD-EVEKMVKISLDEFKRYVLGNTNSMIAFSLDNKY 170
>gi|423509887|ref|ZP_17486418.1| hypothetical protein IG3_01384 [Bacillus cereus HuA2-1]
gi|402456119|gb|EJV87897.1| hypothetical protein IG3_01384 [Bacillus cereus HuA2-1]
Length = 202
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|423366248|ref|ZP_17343681.1| hypothetical protein IC3_01350 [Bacillus cereus VD142]
gi|423516678|ref|ZP_17493159.1| hypothetical protein IG7_01748 [Bacillus cereus HuA2-4]
gi|401088339|gb|EJP96529.1| hypothetical protein IC3_01350 [Bacillus cereus VD142]
gi|401164628|gb|EJQ71961.1| hypothetical protein IG7_01748 [Bacillus cereus HuA2-4]
Length = 202
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|229011299|ref|ZP_04168491.1| MutT/nudix [Bacillus mycoides DSM 2048]
gi|423600659|ref|ZP_17576659.1| hypothetical protein III_03461 [Bacillus cereus VD078]
gi|423663155|ref|ZP_17638324.1| hypothetical protein IKM_03552 [Bacillus cereus VDM022]
gi|228749955|gb|EEL99788.1| MutT/nudix [Bacillus mycoides DSM 2048]
gi|401231205|gb|EJR37708.1| hypothetical protein III_03461 [Bacillus cereus VD078]
gi|401296354|gb|EJS01973.1| hypothetical protein IKM_03552 [Bacillus cereus VDM022]
Length = 202
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|423084114|ref|ZP_17072619.1| hydrolase, NUDIX family [Clostridium difficile 002-P50-2011]
gi|423086829|ref|ZP_17075220.1| hydrolase, NUDIX family [Clostridium difficile 050-P50-2011]
gi|357543161|gb|EHJ25194.1| hydrolase, NUDIX family [Clostridium difficile 002-P50-2011]
gi|357545938|gb|EHJ27901.1| hydrolase, NUDIX family [Clostridium difficile 050-P50-2011]
Length = 168
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG R G YH V WI ++Q +L+Q+R+ K + P MW
Sbjct: 2 ELWDLYNADGIKTGNVIKRGNSIEEGYYHLAVEVWILNSNSQ-ILIQKRSKSKKTLPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G I +G+ SL A RE +EE+GI++ KD + + + ++ + DV
Sbjct: 61 GMTT-GCIVSGEESLEGAIREAKEEIGIDITKDEMKVFRSMIHEDTL----------WDV 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
YLV + LQ+ EVS +K+++ +E + LL
Sbjct: 110 YLVK--KEYDISKAILQEEEVSDIKWVSTDEIRQLL 143
>gi|254975962|ref|ZP_05272434.1| NUDIX-family protein [Clostridium difficile QCD-66c26]
gi|255093349|ref|ZP_05322827.1| NUDIX-family protein [Clostridium difficile CIP 107932]
gi|255315095|ref|ZP_05356678.1| NUDIX-family protein [Clostridium difficile QCD-76w55]
gi|255517765|ref|ZP_05385441.1| NUDIX-family protein [Clostridium difficile QCD-97b34]
gi|255650878|ref|ZP_05397780.1| NUDIX-family protein [Clostridium difficile QCD-37x79]
gi|260683953|ref|YP_003215238.1| NUDIX family protein [Clostridium difficile CD196]
gi|260687613|ref|YP_003218747.1| NUDIX family protein [Clostridium difficile R20291]
gi|306520770|ref|ZP_07407117.1| NUDIX-family protein [Clostridium difficile QCD-32g58]
gi|384361591|ref|YP_006199443.1| NUDIX family protein [Clostridium difficile BI1]
gi|260210116|emb|CBA64251.1| NUDIX-family protein [Clostridium difficile CD196]
gi|260213630|emb|CBE05449.1| NUDIX-family protein [Clostridium difficile R20291]
Length = 168
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG R G YH V WI ++Q +L+Q+R+ K + P MW
Sbjct: 2 ELWDLYNADGIKTGNVIKRGNSIEEGYYHLAVEVWILNSNSQ-ILIQKRSKSKKTLPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G I +G+ SL A RE +EE+GI++ KD + + + ++ + DV
Sbjct: 61 GMTT-GCIVSGEDSLEGAIREAKEEIGIDITKDEMKVFRSMIHEDTL----------WDV 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
YLV + LQ+ EVS +K+++ +E + LL
Sbjct: 110 YLVK--KEYDISKAILQEEEVSDIKWVSTDEIRQLL 143
>gi|229132836|ref|ZP_04261681.1| MutT/nudix [Bacillus cereus BDRD-ST196]
gi|228650663|gb|EEL06653.1| MutT/nudix [Bacillus cereus BDRD-ST196]
Length = 202
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|229166871|ref|ZP_04294618.1| MutT/nudix [Bacillus cereus AH621]
gi|423594049|ref|ZP_17570080.1| hypothetical protein IIG_02917 [Bacillus cereus VD048]
gi|228616499|gb|EEK73577.1| MutT/nudix [Bacillus cereus AH621]
gi|401224850|gb|EJR31402.1| hypothetical protein IIG_02917 [Bacillus cereus VD048]
Length = 202
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|126699992|ref|YP_001088889.1| NUDIX family hydrolase [Clostridium difficile 630]
gi|255101528|ref|ZP_05330505.1| NUDIX-family protein [Clostridium difficile QCD-63q42]
gi|423092402|ref|ZP_17080206.1| hydrolase, NUDIX family [Clostridium difficile 70-100-2010]
gi|115251429|emb|CAJ69262.1| putative hydrolase, NUDIX family [Clostridium difficile 630]
gi|357553904|gb|EHJ35640.1| hydrolase, NUDIX family [Clostridium difficile 70-100-2010]
Length = 168
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG R G YH V WI ++Q +L+Q+R+ K + P MW
Sbjct: 2 ELWDLYNADGIKTGNVIKRGNSIEEGYYHLAVEVWILNSNSQ-ILIQKRSKSKKTLPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G I +G+ SL A RE +EE+GI++ KD + + + ++ + DV
Sbjct: 61 GMTT-GCIVSGEDSLEGAIREAKEEIGIDITKDEMKVFRSMIHEDTL----------WDV 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
YLV + LQ+ EVS +K+++ +E + LL
Sbjct: 110 YLVK--KEYDISKAILQEEEVSDIKWVSTDEIRQLL 143
>gi|402814932|ref|ZP_10864525.1| putative nudix hydrolase [Paenibacillus alvei DSM 29]
gi|402507303|gb|EJW17825.1| putative nudix hydrolase [Paenibacillus alvei DSM 29]
Length = 215
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 8/162 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWP 65
+E+LD T + G++ R E H G +H+T + W++ +LLL QRR K +
Sbjct: 4 KEYLDTFTSEMEPIGVSS-RDEAHARGFWHQTFHCWLWKIENGKLLLLFQRRHPQKKDYA 62
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+ DI++AGH+ AG++ + REL+EELGI + + + ++ + + I I+NEF
Sbjct: 63 GLLDITAAGHLEAGETPM-DGIRELREELGIEV--EFSQLTYSGVIPSSIEHENRIDNEF 119
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
V+L I F LQ+ EV ++ + +++ L+A +
Sbjct: 120 CHVFLHEYKGDIT--DFRLQEDEVVSIVMLEAAQFRKLIAGE 159
>gi|295090388|emb|CBK76495.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[Clostridium cf. saccharolyticum K10]
Length = 161
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ +KTG+T R E G YH V+AWI Q LL QR D +P W
Sbjct: 2 EKWDLYNAEREKTGLTMQRGENIPKGLYHLVVSAWIVNRQGQYLLSQRHPD--KQYPLYW 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G + +G++SL A RE++EELGI L + + ++ F ++++ +F DV
Sbjct: 60 E-CTGGAVLSGENSLQGAVREVKEELGITLTPEQGKLIYQFRREDM--------QDFYDV 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166
+L I ++ LQ+TEV V+++ ++ N+ K
Sbjct: 111 WLFHA--DIDIKGIVLQKTEVVDVQWVNQDKLLNMFQK 146
>gi|395240745|ref|ZP_10417770.1| Nucleoside diphosphate (Nudix) hydrolase [Lactobacillus gigeriorum
CRBIP 24.85]
gi|394475695|emb|CCI87747.1| Nucleoside diphosphate (Nudix) hydrolase [Lactobacillus gigeriorum
CRBIP 24.85]
Length = 174
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ + +KT T R + Y V IF S ++L+Q+R D K +P +W
Sbjct: 2 EKLDLYDINHKKTDQTMIRDQSQPKNLYRLAVGVAIF-NSKGQMLIQKRTDDKKLFPSLW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S+AG + +G+SS + QREL+EELG+++ F+ ++ V F D
Sbjct: 61 DVSAAGAVKSGESSQMGIQRELKEELGVSVD-------FSEIRPKVTTT---FPTGFNDF 110
Query: 129 YLVTTLN-PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y TLN + + TLQ++EV VK+ + E K ++ + F+PY
Sbjct: 111 Y---TLNLDLNISDLTLQKSEVVEVKWASQAEIKQMIFSGE--FIPY 152
>gi|228939129|ref|ZP_04101724.1| MutT/nudix [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228972006|ref|ZP_04132624.1| MutT/nudix [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978616|ref|ZP_04138989.1| MutT/nudix [Bacillus thuringiensis Bt407]
gi|229109454|ref|ZP_04239048.1| MutT/nudix [Bacillus cereus Rock1-15]
gi|365160329|ref|ZP_09356497.1| hypothetical protein HMPREF1014_01960 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384185997|ref|YP_005571893.1| phosphohydrolase [Bacillus thuringiensis serovar chinensis CT-43]
gi|410674291|ref|YP_006926662.1| phosphohydrolase [Bacillus thuringiensis Bt407]
gi|423647911|ref|ZP_17623481.1| hypothetical protein IKA_01698 [Bacillus cereus VD169]
gi|452198325|ref|YP_007478406.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|228674021|gb|EEL29271.1| MutT/nudix [Bacillus cereus Rock1-15]
gi|228781112|gb|EEM29317.1| MutT/nudix [Bacillus thuringiensis Bt407]
gi|228787720|gb|EEM35681.1| MutT/nudix [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228820552|gb|EEM66582.1| MutT/nudix [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326939706|gb|AEA15602.1| phosphohydrolase (MutT/nudix family protein) [Bacillus
thuringiensis serovar chinensis CT-43]
gi|363623691|gb|EHL74800.1| hypothetical protein HMPREF1014_01960 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401285865|gb|EJR91704.1| hypothetical protein IKA_01698 [Bacillus cereus VD169]
gi|409173420|gb|AFV17725.1| phosphohydrolase [Bacillus thuringiensis Bt407]
gi|452103718|gb|AGG00658.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 202
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDNEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|423454534|ref|ZP_17431387.1| hypothetical protein IEE_03278 [Bacillus cereus BAG5X1-1]
gi|423472110|ref|ZP_17448853.1| hypothetical protein IEM_03415 [Bacillus cereus BAG6O-2]
gi|401135503|gb|EJQ43100.1| hypothetical protein IEE_03278 [Bacillus cereus BAG5X1-1]
gi|402429575|gb|EJV61660.1| hypothetical protein IEM_03415 [Bacillus cereus BAG6O-2]
Length = 202
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPG 66
E L + G G K R EVHR GD+H T + W + +++ L Q R+ K PG
Sbjct: 3 EWLTIFDTEGNTLG-KKLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+WDI+SAGHI + I RE++EELG++ + F I++ I+ EF
Sbjct: 62 IWDITSAGHIMHDEDVQIGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LIDREFC 119
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
+Y + P+ EV V + + LL +D
Sbjct: 120 HMYFHNVIKPLSFAP----GEEVDDVMKVHATSFLQLLKRD 156
>gi|423642973|ref|ZP_17618591.1| hypothetical protein IK9_02918 [Bacillus cereus VD166]
gi|401274977|gb|EJR80944.1| hypothetical protein IK9_02918 [Bacillus cereus VD166]
Length = 202
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|172057031|ref|YP_001813491.1| NUDIX hydrolase [Exiguobacterium sibiricum 255-15]
gi|171989552|gb|ACB60474.1| NUDIX hydrolase [Exiguobacterium sibiricum 255-15]
Length = 197
Score = 74.3 bits (181), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+ E L V+ TGQ R ++H+ G +H T + ++ ++LQ+RA K +PG
Sbjct: 3 ESEQLMVVDSTGQPL-YPATRKKIHQEGLWHETFHCFVINHEEGHVILQQRAKQKKDFPG 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVF---TFLQQNVINDGKFINN 123
+ DI++AGH+ AG++ REL+EE+G+ FE +F FL++ ++ D K
Sbjct: 62 LIDITAAGHLLAGETPR-DGIRELEEEIGL---VRQFEQLFPLGVFLEELILGDLK---- 113
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
+ V+L T +PLE + LQ EVS + + + E+ L + +F D
Sbjct: 114 DRERVHLFLTDESMPLERYVLQTEEVSRLIALPFSEFARLTDETAETFQTAD 165
>gi|311032971|ref|ZP_07711061.1| hypothetical protein Bm3-1_20934 [Bacillus sp. m3-13]
Length = 202
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 7/142 (4%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
T R EVH G +H T + WI A + + L Q R+ K +PG+ DI++AGH+ + +
Sbjct: 16 TASREEVHLKGHWHETFHCWIKAMIDGKEYLYFQLRSKDKKDYPGLLDITAAGHLLSHE- 74
Query: 82 SLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
++ RE++EE+GI + + ++ + + FI+ E A V+L+ IP E+
Sbjct: 75 NVEDGIREVEEEIGIKVGMEELSYLGVIPYEKELEG--FIDREHAHVFLLKRY--IPFES 130
Query: 142 FTLQQTEVSAVKYIAYEEYKNL 163
FT+Q EVS + + E++ L
Sbjct: 131 FTMQSEEVSGIFMVPLEDFYQL 152
>gi|423539048|ref|ZP_17515439.1| hypothetical protein IGK_01140 [Bacillus cereus HuB4-10]
gi|401176196|gb|EJQ83393.1| hypothetical protein IGK_01140 [Bacillus cereus HuB4-10]
Length = 202
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ ++ + I++ + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLKYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
EV V + + LL ++ SF
Sbjct: 135 ---GDEVDDVMKVHATAFLQLLKREISSF 160
>gi|423466309|ref|ZP_17443077.1| hypothetical protein IEK_03496 [Bacillus cereus BAG6O-1]
gi|402415741|gb|EJV48062.1| hypothetical protein IEK_03496 [Bacillus cereus BAG6O-1]
Length = 205
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ ++ + I++ + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLKYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
EV V + + LL ++ SF
Sbjct: 135 ---GDEVDDVMKVHATAFLQLLKREISSF 160
>gi|229043755|ref|ZP_04191457.1| MutT/nudix [Bacillus cereus AH676]
gi|228725608|gb|EEL76863.1| MutT/nudix [Bacillus cereus AH676]
Length = 202
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDNEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEVV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|255656351|ref|ZP_05401760.1| NUDIX-family protein [Clostridium difficile QCD-23m63]
gi|296450205|ref|ZP_06891966.1| NUDIX-family protein [Clostridium difficile NAP08]
gi|296878586|ref|ZP_06902591.1| NUDIX-family protein [Clostridium difficile NAP07]
gi|296260968|gb|EFH07802.1| NUDIX-family protein [Clostridium difficile NAP08]
gi|296430393|gb|EFH16235.1| NUDIX-family protein [Clostridium difficile NAP07]
Length = 168
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ G KTG R G YH V WI ++Q +L+Q+R+ K + P MW
Sbjct: 2 ELWDLYNADGIKTGNVIKRGNSIEDGYYHLAVEVWILNSNSQ-ILIQKRSKSKKTLPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G I +G+ SL A RE +EE+GI++ KD + + ++ + DV
Sbjct: 61 GMTT-GCIVSGEESLEGAIREAKEEIGIDITKDEMKIFRSMTHEDTL----------WDV 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
YLV + LQ+ EVS +K+++ +E + LL
Sbjct: 110 YLVK--KEYDISKAILQEEEVSDIKWVSTDEIRQLL 143
>gi|399516309|ref|ZP_10757918.1| hypothetical protein, MutT/nudix family [Leuconostoc
pseudomesenteroides 4882]
gi|398648852|emb|CCJ65945.1| hypothetical protein, MutT/nudix family [Leuconostoc
pseudomesenteroides 4882]
Length = 173
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV T Q TG T R E GDYH NA +F + ELL+Q+R+ K + PG W
Sbjct: 11 ELWDVYTRQRQLTGRTHRRGEPLAQGDYHMVANALVFNQDG-ELLVQQRSFKKMALPGGW 69
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G + G++SL QRE+ EELG + FE + T +++ F D+
Sbjct: 70 VLATGGSVLQGETSLEGIQREVVEELGAQATQ--FERIRTSWEKDW----------FDDL 117
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
Y VT++ PL++ +Q +EV V +++ ++ + + DP+++ D+
Sbjct: 118 Y-VTSITQ-PLDSLKIQTSEVEQVTWLSIKDAQKI--SSDPNYLDDDI 161
>gi|229096507|ref|ZP_04227478.1| MutT/nudix [Bacillus cereus Rock3-29]
gi|423443225|ref|ZP_17420131.1| hypothetical protein IEA_03555 [Bacillus cereus BAG4X2-1]
gi|423446527|ref|ZP_17423406.1| hypothetical protein IEC_01135 [Bacillus cereus BAG5O-1]
gi|423535713|ref|ZP_17512131.1| hypothetical protein IGI_03545 [Bacillus cereus HuB2-9]
gi|228686713|gb|EEL40620.1| MutT/nudix [Bacillus cereus Rock3-29]
gi|401131899|gb|EJQ39547.1| hypothetical protein IEC_01135 [Bacillus cereus BAG5O-1]
gi|402413034|gb|EJV45383.1| hypothetical protein IEA_03555 [Bacillus cereus BAG4X2-1]
gi|402461766|gb|EJV93478.1| hypothetical protein IGI_03545 [Bacillus cereus HuB2-9]
Length = 202
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + I++ + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLTYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
EV+ V + + LL ++ SF
Sbjct: 135 ---GDEVADVMKVRATAFLQLLKREISSF 160
>gi|423667674|ref|ZP_17642703.1| hypothetical protein IKO_01371 [Bacillus cereus VDM034]
gi|423676261|ref|ZP_17651200.1| hypothetical protein IKS_03804 [Bacillus cereus VDM062]
gi|401303339|gb|EJS08901.1| hypothetical protein IKO_01371 [Bacillus cereus VDM034]
gi|401307382|gb|EJS12807.1| hypothetical protein IKS_03804 [Bacillus cereus VDM062]
Length = 202
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + ++ L Q R++ K PG+WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAGDMFLYFQLRSNNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
LI RE++EELG++ + + + I+ + EF +Y + P+P
Sbjct: 78 LIGGLREIEEELGLSFQTNDLTYKGIYKIDYEIS--SLTDREFCHMYFHNVIKPLPF 132
>gi|118477419|ref|YP_894570.1| hypothetical protein BALH_1739 [Bacillus thuringiensis str. Al
Hakam]
gi|196047280|ref|ZP_03114495.1| mutT/nudix family protein [Bacillus cereus 03BB108]
gi|225863924|ref|YP_002749302.1| mutT/nudix family protein [Bacillus cereus 03BB102]
gi|229184200|ref|ZP_04311409.1| MutT/nudix [Bacillus cereus BGSC 6E1]
gi|376265858|ref|YP_005118570.1| phosphohydrolase [Bacillus cereus F837/76]
gi|118416644|gb|ABK85063.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|196021905|gb|EDX60597.1| mutT/nudix family protein [Bacillus cereus 03BB108]
gi|225790166|gb|ACO30383.1| mutT/nudix family protein [Bacillus cereus 03BB102]
gi|228599315|gb|EEK56926.1| MutT/nudix [Bacillus cereus BGSC 6E1]
gi|364511658|gb|AEW55057.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus cereus
F837/76]
Length = 202
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR G++H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVINPLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ SF V
Sbjct: 134 P----GEEVDDVMKIHATSFLQLLKREISSFTATSV 165
>gi|304406473|ref|ZP_07388129.1| NUDIX hydrolase [Paenibacillus curdlanolyticus YK9]
gi|304344531|gb|EFM10369.1| NUDIX hydrolase [Paenibacillus curdlanolyticus YK9]
Length = 212
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSSLI 84
R++ H +G +H+T + W+ + + Q R KD+ PG +DI++AGH++AG+ +L
Sbjct: 21 RAQTHALGHWHQTFHCWLTRRQGGDRFVRFQLRQLTKDTNPGHYDITAAGHLAAGE-TLA 79
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQ--NVINDGKFINNEFADVY-LVTTLNPIPLEA 141
A REL+EELGI +P + + + +Q +N FI+ E + V+ LV L PL +
Sbjct: 80 HAVRELEEELGIAVPFASLHPLMQWREQAEGEVNGRPFIDRELSHVFGLVCDL---PLTS 136
Query: 142 FTLQQTEVSAV 152
F LQ EVS +
Sbjct: 137 FKLQAEEVSGI 147
>gi|228985093|ref|ZP_04145260.1| MutT/nudix [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228774580|gb|EEM22979.1| MutT/nudix [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 202
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++P+P
Sbjct: 78 QIGGLREIEEELGLSFQTIDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDPLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKRETSSFTAISV 165
>gi|260591084|ref|ZP_05856542.1| putative dipeptidyl-peptidase III [Prevotella veroralis F0319]
gi|260536949|gb|EEX19566.1| putative dipeptidyl-peptidase III [Prevotella veroralis F0319]
Length = 701
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 162/389 (41%), Gaps = 59/389 (15%)
Query: 399 SEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSE 454
S +Y + + + L +A A + +R++ +++ + D D I W+ E D
Sbjct: 264 SGKYGAAIEKIVYWLERAKTYAENDQQRRVISLLIHYYITGDLRDFDAYSIEWLKEQDGR 323
Query: 455 LDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSK 514
+D G E Y D + G K ++E + +D +AT + + N Q E + P++ ++
Sbjct: 324 IDFINGFIEVYGDPM-GLKGSWEGIVEYKDLEATHRTQTISTNAQWFEDHSPVNPIFRKA 382
Query: 515 DVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA-------- 566
V VI GD + NLPN + I + G+ V + N++ A
Sbjct: 383 KVKGVTANVICAAMLGGDEYPASAIGINLPNADWIRAEYGSKSVTISNLTHAYDMAAKGN 442
Query: 567 KFKNILRPIADVCIRKEQQELVDFDSFFTHNI---CHECC-HGIG---PHSITLPDGRQS 619
FK + I +E ++L+D + T N+ HEC HG G P T PD
Sbjct: 443 GFKE------EFVIDEETRKLMDKYADKTDNLHTDLHECLGHGSGRLLPG--TDPDA--- 491
Query: 620 TVRLELQELHSAMEEAKADIVGLW--ALKFLIGRDLL-PKSLVKSMYVSFLAGCF--RSV 674
L+ + +EEA+AD+ GL+ A LI LL K K+ Y ++ + V
Sbjct: 492 -----LKNYGNTIEEARADLFGLYYIADDKLIELGLLDDKEAYKAQYYGYMMNGLLTQQV 546
Query: 675 RFG----LEESHGKGQALQFNWLFE-------------KEAFILHSDDTFSV-DFDKVEG 716
R +EESH + +AL W E K+A + D+ +
Sbjct: 547 RIKPGKQIEESHMQNRALIAQWAMELGKADKVIELVTRKDATTGEEKTYVQINDYAALRR 606
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKYC 745
EI I++ GD EAA L+++Y
Sbjct: 607 IFAHELAEIQRIKSEGDFEAARKLVERYA 635
>gi|118586553|ref|ZP_01543995.1| hypothetical protein, MutT/nudix family [Oenococcus oeni ATCC
BAA-1163]
gi|118432994|gb|EAV39718.1| hypothetical protein, MutT/nudix family [Oenococcus oeni ATCC
BAA-1163]
Length = 191
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 17/166 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L G+K G+ K R E + G++H VNA IF E+L+Q+R+ K PG W
Sbjct: 29 ESWDLLNKEGRKIGL-KYRGEPFKPGEWHSLVNASIF-NYQHEILMQQRSFNKIGRPGEW 86
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+ + G + AG+ SL + +RE++EE+G+ L FV TF V F +
Sbjct: 87 DLETGGSVLAGEDSLTAIKREVKEEVGLELNFSEENFVETFRNWPV----------FDNW 136
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y++ + ++ +Q++E+ K++ +++ L+ + ++PY
Sbjct: 137 YVIKA--DLSIKDIRIQKSELEQAKFMPFDQAVKYLSSN---YLPY 177
>gi|402557750|ref|YP_006599021.1| mutT/nudix family protein [Bacillus cereus FRI-35]
gi|401798960|gb|AFQ12819.1| mutT/nudix family protein [Bacillus cereus FRI-35]
Length = 202
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
RE++EELG++ A++ +FT + + N + EF +Y +NP+P
Sbjct: 78 QSGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVINPLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ SF V
Sbjct: 134 P----GQEVDDVMKIHATSFLQLLKREISSFTATSV 165
>gi|298250620|ref|ZP_06974424.1| NUDIX hydrolase [Ktedonobacter racemifer DSM 44963]
gi|297548624|gb|EFH82491.1| NUDIX hydrolase [Ktedonobacter racemifer DSM 44963]
Length = 258
Score = 73.6 bits (179), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRA 58
+ E V++E L + Q G T PR+ VH+ G +H T + W F + LL QRRA
Sbjct: 49 IQEGEVEQEILAIYDEQRQPLG-TLPRAVVHQQGHWHETFHCWFFRQEGARTYLLFQRRA 107
Query: 59 DFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118
K +P DI++AGH+ AG+ ++ RE+ EE+GI + E + + + +
Sbjct: 108 ASKKDFPLKLDITAAGHLLAGE-TVRDGVREVAEEVGITVAYH--ELLPVGVIPSTVEID 164
Query: 119 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVS 150
+ I+ EF VYL P P F LQQ EV+
Sbjct: 165 QLIDREFCHVYLYHYQAPTP--RFLLQQEEVA 194
>gi|421186693|ref|ZP_15644075.1| NUDIX family hydrolase [Oenococcus oeni AWRIB418]
gi|399965497|gb|EJO00069.1| NUDIX family hydrolase [Oenococcus oeni AWRIB418]
Length = 177
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 17/166 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L G+K G+ K R E + G++H VNA IF E+L+Q+R+ K PG W
Sbjct: 15 ESWDLLNKEGRKIGL-KYRGEPFKPGEWHSLVNASIF-NYQHEILMQQRSFNKIGRPGEW 72
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+ + G + AG+ SL + +RE++EE+G+ L FV TF V F +
Sbjct: 73 DLETGGSVLAGEDSLTAIKREVKEEVGLELNFSEENFVETFRNWPV----------FDNW 122
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y++ + ++ +Q++E+ K++ +++ L+ + ++PY
Sbjct: 123 YVIKA--DLSIKDIRIQKSELEQAKFMPFDQAVKYLSSN---YLPY 163
>gi|423397331|ref|ZP_17374532.1| hypothetical protein ICU_03025 [Bacillus cereus BAG2X1-1]
gi|401650225|gb|EJS67799.1| hypothetical protein ICU_03025 [Bacillus cereus BAG2X1-1]
Length = 202
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPSIWDITSAGHIMHNEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y L P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVLKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKREISSFTAISV 165
>gi|374709125|ref|ZP_09713559.1| NUDIX hydrolase [Sporolactobacillus inulinus CASD]
Length = 171
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ + TG T R + DYH ++ IF S E+L+Q+R +K WP MW
Sbjct: 2 ERWDIYDKNRRLTGRTMARGQKFGKDDYHLVIHVCIF-NSKNEMLIQQRQPWKKGWPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELG--INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
D++ G +G+SS+ +A+RE EELG I+L + F F + F
Sbjct: 61 DVTVGGSALSGESSIEAAERETFEELGNKIDLSNERPFFTVNF------------DTGFD 108
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
D YLV + ++ LQ EV +VK+ + +E +L+ + F+ Y
Sbjct: 109 DYYLVE--RELAIKDLNLQYEEVQSVKWASKDEIVSLIQ--EGRFIDY 152
>gi|423408188|ref|ZP_17385337.1| hypothetical protein ICY_02873 [Bacillus cereus BAG2X1-3]
gi|401658087|gb|EJS75587.1| hypothetical protein ICY_02873 [Bacillus cereus BAG2X1-3]
Length = 202
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPSIWDITSAGHIMHNEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y L P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVLKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKREISSFTAISV 165
>gi|229102601|ref|ZP_04233305.1| MutT/nudix [Bacillus cereus Rock3-28]
gi|228680828|gb|EEL35001.1| MutT/nudix [Bacillus cereus Rock3-28]
Length = 202
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFIEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + I++ + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLTYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
EV V + + LL ++ SF
Sbjct: 135 ---GDEVDDVMKVRATAFLQLLKREISSF 160
>gi|423475910|ref|ZP_17452625.1| hypothetical protein IEO_01368 [Bacillus cereus BAG6X1-1]
gi|402434742|gb|EJV66779.1| hypothetical protein IEO_01368 [Bacillus cereus BAG6X1-1]
Length = 202
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEKV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 DIGGLREIEEELGLSFQTADLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|384047502|ref|YP_005495519.1| nudix hydrolase [Bacillus megaterium WSH-002]
gi|345445193|gb|AEN90210.1| Uncharacterized Nudix hydrolase [Bacillus megaterium WSH-002]
Length = 209
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKD 62
++ +E L + ++ G T R EVH G +H T + W + + Q R++ K
Sbjct: 1 MMNDEVLTIFNNQQERIG-TASRKEVHEKGYWHETFHCWFVSRENDIDYIYFQIRSEQKQ 59
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGIN------LPKDAFEFVFTFLQQNVIN 116
+PG DI++AGH+ +++ RE+ EELG+N LP D F++ ++
Sbjct: 60 DYPGALDITAAGHLLHTETAE-DGVREIHEELGVNISFDELLPLDVFKY--------EVS 110
Query: 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
+I+ EFA V+L + + PL AF LQQ EVS +
Sbjct: 111 QPHYIDKEFAHVFLYYSSH--PLSAFILQQEEVSGL 144
>gi|423555272|ref|ZP_17531575.1| hypothetical protein II3_00477 [Bacillus cereus MC67]
gi|401196676|gb|EJR03614.1| hypothetical protein II3_00477 [Bacillus cereus MC67]
Length = 202
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSINKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYNGIFKIDYEISN--LTDREFCHMYFHNVIQPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL +D S V
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKRDISSLTTISV 165
>gi|149178173|ref|ZP_01856767.1| hypothetical protein PM8797T_30701 [Planctomyces maris DSM 8797]
gi|148842955|gb|EDL57324.1| hypothetical protein PM8797T_30701 [Planctomyces maris DSM 8797]
Length = 168
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PRS VH HR N ++F S +LLLQ R+ KD +P + S++GH+SAG+ L S
Sbjct: 21 PRSVVHARKLLHRAANVFVF-NSQGKLLLQFRSATKDEYPHCYTSSASGHLSAGEDYLES 79
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF---INNEFADVYLVTTLNPIPLEAF 142
AQRE+QEE+GI P + E KF +N F L T + P F
Sbjct: 80 AQREMQEEIGIETPLEWLE--------------KFPGTPDNAFEHTVLFRTFSDGP---F 122
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
T E+ ++ +L +D+ F P
Sbjct: 123 TFDPVEIERGEFFELPHIDQMLIEDESQFTP 153
>gi|288926055|ref|ZP_06419983.1| peptidase, M49 family [Prevotella buccae D17]
gi|288337095|gb|EFC75453.1| peptidase, M49 family [Prevotella buccae D17]
Length = 671
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 158/383 (41%), Gaps = 56/383 (14%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y +++ L K+ A + K +++ + S + D D IAW+ + D +D
Sbjct: 238 YGKAISKIVYWLDKSLQYAENDRQKEVINHLMAFYRSGDLTDFDTYSIAWVRQQDGMIDF 297
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G K T+E + +D +AT + + N Q E + P+D +K + V
Sbjct: 298 INGFIEVYGDPL-GLKGTWEGIVEYKDMEATKRTQCISSNAQWFEDHSPVDERFKKRVVT 356
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE-----AKFKNIL 572
V+ GD + NLPN + I G+ V + N++E AK L
Sbjct: 357 GVVAHVVCAAMLGGDEYPASAIGINLPNADWIRARYGSKSVTIGNLTEAYNQVAKGNGFL 416
Query: 573 RPI----ADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGRQSTVRLELQ 626
+ C+ ++ ++ D H HEC HG G T PD L+
Sbjct: 417 DEFVIDASTRCLIEKYGDICD----ELHTDLHECLGHGSGQLLPGTDPDA--------LK 464
Query: 627 ELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS--VRF-- 676
S +EEA+AD+ GL+ ++ +L LV KS Y S+L + VR
Sbjct: 465 AYGSTIEEARADLFGLY---YMADDKVLELGLVPDGEAYKSQYYSYLMNGLLTQLVRIKQ 521
Query: 677 --GLEESHGKGQALQFNWLFEKE----AFILHSDD-------TFSV--DFDKVEGAVESL 721
+EE+H + +AL W + DD T+ D+ K+ L
Sbjct: 522 GDKIEEAHMRNRALIARWTLAHADGAVELVCEQDDREPKGRKTYMKVNDYAKLRTLFGEL 581
Query: 722 STEILTIQARGDKEAASLLLQKY 744
EI I++ GD EAA L++ Y
Sbjct: 582 LREIQRIKSEGDYEAARRLVEGY 604
>gi|423403442|ref|ZP_17380615.1| hypothetical protein ICW_03840 [Bacillus cereus BAG2X1-2]
gi|401648539|gb|EJS66134.1| hypothetical protein ICW_03840 [Bacillus cereus BAG2X1-2]
Length = 202
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEKV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 DIGGLREIEEELGLSFQTADLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|333983753|ref|YP_004512963.1| NUDIX hydrolase [Methylomonas methanica MC09]
gi|333807794|gb|AEG00464.1| NUDIX hydrolase [Methylomonas methanica MC09]
Length = 167
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
+PR E+H + HR V+ +F +S Q LLLQ+R+ KD G+WD S+AGH+ G++ +
Sbjct: 19 RPRREIHTLSLRHRAVHILVFNDSGQ-LLLQKRSLKKDLNKGLWDTSAAGHVDQGETYAV 77
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
A REL EELG++ A +F + + EF VY P F L
Sbjct: 78 CAPRELTEELGVST---ALTALFK------LEPTPALGMEFIQVYECRHNGP-----FNL 123
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKENTME 197
+ E+ ++++ +E + +D + + F II + Y+ M+
Sbjct: 124 AEEEIDEIRWLNRDEVDKRVDDNDATLT---------ETFRIIWRHYRGYIMQ 167
>gi|414563037|ref|YP_006041998.1| NUDIX hydrolase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338846102|gb|AEJ24314.1| NUDIX hydrolase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 156
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G YH V+A +F + + L+ QR+ D K+ WP WDI+ G AG++S + REL+EE
Sbjct: 10 GAYHLVVHACVFNDKGEMLIQQRQKD-KEGWPSYWDITVGGSALAGETSQEAVMRELKEE 68
Query: 94 LGINLPKDAFE--FVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSA 151
LG+ L F TF +N F D +LV L + + LQ EV A
Sbjct: 69 LGLALDLAGVRPHFSITF------------DNGFDDTFLV--LQAVDVTKLVLQTEEVQA 114
Query: 152 VKYIAYEEYKNLLAKDDPSFVPY 174
V++ + +E ++ D F+PY
Sbjct: 115 VRWASRDEILAMI--DAGIFIPY 135
>gi|228958276|ref|ZP_04120003.1| MutT/nudix [Bacillus thuringiensis serovar pakistani str. T13001]
gi|423629149|ref|ZP_17604897.1| hypothetical protein IK5_02000 [Bacillus cereus VD154]
gi|228801401|gb|EEM48291.1| MutT/nudix [Bacillus thuringiensis serovar pakistani str. T13001]
gi|401267904|gb|EJR73959.1| hypothetical protein IK5_02000 [Bacillus cereus VD154]
Length = 202
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR G++H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGNWHETFHCWFVEKDNEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTNDLTYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|218231657|ref|YP_002366685.1| mutT/nudix family protein [Bacillus cereus B4264]
gi|229150223|ref|ZP_04278445.1| MutT/nudix [Bacillus cereus m1550]
gi|218159614|gb|ACK59606.1| mutT/nudix family protein [Bacillus cereus B4264]
gi|228633342|gb|EEK89949.1| MutT/nudix [Bacillus cereus m1550]
Length = 202
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|390953152|ref|YP_006416910.1| Peptidase family M49 [Aequorivita sublithincola DSM 14238]
gi|390419138|gb|AFL79895.1| Peptidase family M49 [Aequorivita sublithincola DSM 14238]
Length = 679
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 42/332 (12%)
Query: 443 DSDIAWIELDS-ELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVL 501
D ++AW + +D E Y D + GY+ ++E+ I I D + ++ + +N Q
Sbjct: 289 DYNVAWTGATAGNIDYINSFIEVYNDPL-GYRGSYESVIQINDFDMSEKMAVLSENAQWF 347
Query: 502 EQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLK 561
E N P+ +K K+V+ +V+ + +GD + NLPN I G+ V L
Sbjct: 348 EDNSPLMPEHKKKNVVGVTYKVVNVAGEAGDSSPSTPIGVNLPNANWIRASVGSKSVSLG 407
Query: 562 NVSEA--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITL 613
N+ EA + K + + + ++ ++ D H HE IG S L
Sbjct: 408 NIIEAYNNAGNTGRLKEFVNDPEEEELEEKYGQVAD----KLHTALHEV---IGHASGQL 460
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRS 673
G T + L+ S +EE +AD+VGL+ +L L LV +A
Sbjct: 461 NPGVGET-KETLKNYASTLEEGRADLVGLY---YLYNPKLQELGLVDDWKKVGMAAYDGY 516
Query: 674 VRFGL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFD 712
+R GL EE+H + + W++E E +++ D++
Sbjct: 517 IRNGLMTQLIRLNIGDDVEEAHMRNRQWVSAWVYEHGKKDNVIEKITRDGKTYYNINDYE 576
Query: 713 KVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
K+ L E I++ GD A L++ Y
Sbjct: 577 KLHDLFGQLLRETQRIKSEGDYAAVEHLVETY 608
>gi|228907715|ref|ZP_04071571.1| MutT/nudix [Bacillus thuringiensis IBL 200]
gi|228851948|gb|EEM96746.1| MutT/nudix [Bacillus thuringiensis IBL 200]
Length = 202
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|335427522|ref|ZP_08554453.1| NUDIX hydrolase [Haloplasma contractile SSD-17B]
gi|334895195|gb|EGM33375.1| NUDIX hydrolase [Haloplasma contractile SSD-17B]
Length = 163
Score = 72.8 bits (177), Expect = 8e-10, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D+ TM QKTGIT + + + G+Y V+ WI E+L+Q+R +K +P +WD S
Sbjct: 5 DLYTMDRQKTGITNIKGDPLKEGEYIIIVHVWI-TNHNNEILIQKRQPWKKWYPNLWDCS 63
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
G +G+ ++ +A RE +EEL I L + +FT ++ F D+ LV
Sbjct: 64 VVGGALSGEDTVDTAIREAKEELSIELEAEDINILFTHKTKHC----------FYDICLV 113
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
I ++ LQ EV+ +K+ +E +++ D FV D
Sbjct: 114 Q--KDIDIKKLNLQHEEVADIKWATKDEIVSMIKGD--KFVKTD 153
>gi|86159387|ref|YP_466172.1| hypothetical protein Adeh_2965 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775898|gb|ABC82735.1| hypothetical protein Adeh_2965 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 668
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 128/575 (22%), Positives = 218/575 (37%), Gaps = 85/575 (14%)
Query: 198 RSLTLQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDW 257
R L ++L + + ++LA L A++E L ++ AA V++ + Q+
Sbjct: 119 RRTALARELSQRLFAVVESDLADLRPAEREMLRHLVDAARVIERLSARQLGT-------- 170
Query: 258 LKEHADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEY 317
L A D + +L+NK PW + A T D A L
Sbjct: 171 LGMAARIPPGDGASRLAFLVNKGPWCT-----APATEGDPACGAL--------------- 210
Query: 318 KASFPLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSG 377
P+P P + YP D+ Q DA + + L S +
Sbjct: 211 ---SPVP-PRRSGLYPADL----------------QADAGFCAGLARAPDAAALTSPFTA 250
Query: 378 HIVDATNHSVGSIYDLYSVPYSEEYNSYL---TRASELLHKAGDMASSPSLKRLLHSKAD 434
+ DA L +VPY + + + RA E A +L L + A
Sbjct: 251 VVRDARG-------GLAAVPYPKAWPEDMEAVARALERAAAAIRATDERALHAYLLAAAR 303
Query: 435 AFLSNNYYDSDIAWIELDSELD---VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQV 491
AF + +D AW +++E + + P ETY D KA FE + D + A
Sbjct: 304 AFRDGGWERADEAWASMNAENSRWFLRVAPDETYSDPC-ALKAGFELALARIDPGSLAWQ 362
Query: 492 KLFGDNLQVLEQNLP--MDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQ--TVAFNLPNDE 547
+ Q +E L Y ++ V I ++ N+GD + P+ TV +LPN
Sbjct: 363 RRLEPVKQDMEVALARLAGPPYAARPVAFHLPDFIAIVLNAGDARSPRGATVGQSLPNWG 422
Query: 548 RIVKD-RGTSMVMLKNVSEAKFKNILRPIAD--VCIRKEQQELVDFDSFFTHNICHECCH 604
++ + RG ++ M ++ + I R A +C + D D+ + HE H
Sbjct: 423 KVANEGRGRTVAMTNFYTDPESLEIRRRRAASVLCPDTMARRTPDPDAERMGFVLHEAAH 482
Query: 605 GIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYV 664
+GP +GR + ++ L + +EE KA L+ +L GR ++ + + +
Sbjct: 483 NLGPSHEYAVEGRTAP-QIFGGNLAAMLEELKAQQSALYLAGWLAGRGVISPAQAERALL 541
Query: 665 SFLAGCFRSVRFGLEESHGKGQALQFN---------------WLFEKEAFILHSDDTFSV 709
+ F V G+ S G+ + W +A + +
Sbjct: 542 ENVVWAFGQVSGGVRTSDGRLRPYAALAAIQLAALADDGALVWRPAAKAANGEDEGCLEL 601
Query: 710 DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
D ++ +VE L L I+ARGD+ AA L+Q +
Sbjct: 602 DRARLGASVERLEALALGIKARGDRAAAEALVQAH 636
>gi|251794494|ref|YP_003009225.1| NUDIX hydrolase [Paenibacillus sp. JDR-2]
gi|247542120|gb|ACS99138.1| NUDIX hydrolase [Paenibacillus sp. JDR-2]
Length = 210
Score = 72.4 bits (176), Expect = 8e-10, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWP 65
EE D+ G T RSE H +G +HR+ + W+ E+ + + Q R KD++P
Sbjct: 3 EERFDIYDEQLNPLG-TASRSETHALGYWHRSFHCWLTRREENRRFVRFQLRQAGKDTYP 61
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGK-----F 120
G +DI++AGH+SAG+ ++ A RE++EELG+ FE + + G+ F
Sbjct: 62 GYYDITAAGHLSAGE-TMQDAVREIEEELGV---AARFEELIPLGEARKEMSGEVKGVPF 117
Query: 121 INNEFADVY-LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
I+ E +DV+ LV +L PL LQ EV+AV E L ++ P +
Sbjct: 118 IDREVSDVFALVCSL---PLGDLKLQAEEVAAVFEADVELMIRLFEEELPELI 167
>gi|269838008|ref|YP_003320236.1| NUDIX hydrolase [Sphaerobacter thermophilus DSM 20745]
gi|269787271|gb|ACZ39414.1| NUDIX hydrolase [Sphaerobacter thermophilus DSM 20745]
Length = 227
Score = 72.4 bits (176), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF---AESTQELLLQRRADFKDS 63
++E DVLT G TG+ KPR+ VHR GD+HR+ + W+ + ++L QRR+ KD+
Sbjct: 6 RDELFDVLTAEGVPTGMVKPRAAVHRDGDWHRSFHCWVVWRGPDGCVQVLFQRRSPTKDT 65
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEE 93
P D++ GH +G+ +L RE +EE
Sbjct: 66 VPNHLDVAVGGHYRSGE-TLTEVVREAEEE 94
>gi|315608325|ref|ZP_07883314.1| M49 family peptidase [Prevotella buccae ATCC 33574]
gi|315249955|gb|EFU29955.1| M49 family peptidase [Prevotella buccae ATCC 33574]
Length = 671
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 157/383 (40%), Gaps = 56/383 (14%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y +++ L K+ A + K +++ + S + D D IAW+ + D +D
Sbjct: 238 YGKAISKIIYWLDKSLQYAENDRQKEVINHLMAFYRSGDLTDFDTYSIAWVRQQDGMIDF 297
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G K T+E + +D +AT + + N Q E + P+D +K + V
Sbjct: 298 INGFIEVYGDPL-GLKGTWEGIVEYKDMEATKRTQCISSNAQWFEDHSPVDERFKKRVVT 356
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE-----AKFKNIL 572
V+ GD + NLPN + I G+ V + N++E AK L
Sbjct: 357 GVVAHVVCAAMLGGDEYPASAIGINLPNADWIRARYGSKSVTIGNLTEAYNQVAKGNGFL 416
Query: 573 RPI----ADVCIRKEQQELVDFDSFFTHNICHECC-HGIGP-HSITLPDGRQSTVRLELQ 626
+ C+ ++ ++ D H HEC HG G T PD L+
Sbjct: 417 DEFVIDASTRCLIEKYGDICD----ELHTDLHECLGHGSGQLLPGTDPDA--------LK 464
Query: 627 ELHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS--VRF-- 676
S +EEA+AD+ GL+ ++ +L LV KS Y S+L + VR
Sbjct: 465 AYGSTIEEARADLFGLY---YMADDKVLELGLVPDGEAYKSQYYSYLMNGLLTQLVRIKQ 521
Query: 677 --GLEESHGKGQALQFNWLFEKE----AFILHSDDT--------FSV-DFDKVEGAVESL 721
+EE+H + +AL W + DD V D+ K+ L
Sbjct: 522 GDKIEEAHMRNRALIARWTLAHADGAVELVCEQDDREPKGRKTYLKVNDYAKLRTLFGEL 581
Query: 722 STEILTIQARGDKEAASLLLQKY 744
EI I++ GD EAA L++ Y
Sbjct: 582 LREIQRIKSEGDYEAARRLVEGY 604
>gi|402306633|ref|ZP_10825673.1| peptidase family M49 domain protein [Prevotella sp. MSX73]
gi|400379664|gb|EJP32500.1| peptidase family M49 domain protein [Prevotella sp. MSX73]
Length = 671
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 157/382 (41%), Gaps = 54/382 (14%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y +++ L K+ A + K +++ + S + D D IAW+ + D +D
Sbjct: 238 YGKAISKIVYWLDKSLQYAENDRQKEVINHLMAFYRSGDLTDFDTYSIAWVRQQDGMVDF 297
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G K T+E + +D +AT + + N Q E + P+D +K + V
Sbjct: 298 INGFIEVYGDPL-GLKGTWEGIVEYKDMEATKRTQCISSNAQWFEDHSPVDERFKKRVVT 356
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE-----AKFKNIL 572
V+ GD + NLPN + I G+ V + N++E AK L
Sbjct: 357 GVVAHVVCAAMLGGDEYPASAIGINLPNADWIRARYGSKSVTIGNLTEAYNQVAKGNGFL 416
Query: 573 RPI----ADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQE 627
+ C+ ++ ++ D H HEC HG G LP T L+
Sbjct: 417 DEFVIDASTRCLIEKYGDICD----ELHTDLHECLGHGSGQ---LLP----GTDPDALKA 465
Query: 628 LHSAMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCFRS--VRF--- 676
S +EEA+AD+ GL+ ++ +L LV KS Y S+L + VR
Sbjct: 466 YGSTIEEARADLFGLY---YMADDKVLELGLVPDGEAYKSQYYSYLMNGLLTQLVRIKQG 522
Query: 677 -GLEESHGKGQALQFNWLFEKE----AFILHSDDT--------FSV-DFDKVEGAVESLS 722
+EE+H + +AL W + DD V D+ K+ L
Sbjct: 523 DKIEEAHMRNRALIARWTLAHADGAVELVCEQDDREPKGRKTYLKVNDYAKLRTLFGELL 582
Query: 723 TEILTIQARGDKEAASLLLQKY 744
EI I++ GD EAA L++ Y
Sbjct: 583 REIQRIKSEGDYEAARRLVEGY 604
>gi|443244941|ref|YP_007378166.1| dipeptidyl-peptidase III [Nonlabens dokdonensis DSW-6]
gi|442802340|gb|AGC78145.1| dipeptidyl-peptidase III [Nonlabens dokdonensis DSW-6]
Length = 672
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 128/329 (38%), Gaps = 42/329 (12%)
Query: 446 IAW-IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
IAW + +D G E Y D I YK ++E + I+D + Q+ + +N Q E N
Sbjct: 289 IAWSTSTEGAVDWINGFIEVYNDPI-AYKGSYETIVQIKDFDMSRQMNVLSENAQWFEDN 347
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNV- 563
P+ +K + V + + + +GD + NLPN+ I G+ V L N+
Sbjct: 348 SPLMEEHKKESVTGVSYKTVNVAGEAGDASPATPIGVNLPNNTWIRTVHGSKSVSLGNII 407
Query: 564 -------SEAKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDG 616
S + + ++ + K+ D H H + H+ +
Sbjct: 408 AAYGNAGSSGRLEEFAHDEKEIELEKKYGAKAD--------KLHTALHEVVGHASGQINP 459
Query: 617 RQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRF 676
T + L S +EE +AD+ GL+ +L+ L +LV +A +R
Sbjct: 460 GVGTPKETLGSYKSTIEEGRADLFGLY---YLMDPKLQELNLVDDWKNYGMAAYDGYIRN 516
Query: 677 GL-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVE 715
GL EE+H + + W++E+ E + + + D+DK+
Sbjct: 517 GLLSQLIRLELGQDVEEAHMRNRQWVSAWVYEQGKDDNVIEKVVKDGKTYYDIKDYDKLR 576
Query: 716 GAVESLSTEILTIQARGDKEAASLLLQKY 744
L E I + GD AA L++ Y
Sbjct: 577 ALFGELLRETQRITSEGDFAAAQALVEDY 605
>gi|124004957|ref|ZP_01689800.1| MutT/nudix family protein [Microscilla marina ATCC 23134]
gi|123989635|gb|EAY29181.1| MutT/nudix family protein [Microscilla marina ATCC 23134]
Length = 211
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 12/155 (7%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIF----AESTQELLLQRRADFKDSWPGMWDISSAGHISAG 79
T R E+H G +H+T++ WI + ++ Q+R+ K+ P DIS+AGH AG
Sbjct: 16 TASRKEIHEKGLWHKTIHCWILRTDPTDQQPYVVFQQRSAQKEYNPLTLDISAAGHYGAG 75
Query: 80 DSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF----INNEFADVYLVTTLN 135
++ A RE++EELGI + + F+ + N+I G++ IN EF Y + ++
Sbjct: 76 ETDQ-EATREIEEELGIQVQWEKLRFLGILQEANIIK-GQYGATAINREFCYTYFL--VD 131
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
PL ++ +Q++E++ V I +E L + + S
Sbjct: 132 NRPLSSYRVQESELATVVQIPVDEGLKLFSGETNS 166
>gi|410453815|ref|ZP_11307759.1| hypothetical protein BABA_08496 [Bacillus bataviensis LMG 21833]
gi|409932861|gb|EKN69817.1| hypothetical protein BABA_08496 [Bacillus bataviensis LMG 21833]
Length = 208
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 27 RSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
R EVHR G +H + + WI + E L LQ R D K P ++DI+SAGH+ A +S+
Sbjct: 21 REEVHRQGLWHESFHCWIVSREEEIDYLYLQLRCDLKKDHPNLFDITSAGHLLAHESAE- 79
Query: 85 SAQRELQEELGINLPKDAF-EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFT 143
RE++EELG+++ AF E + + +N ++NE A +L + + F+
Sbjct: 80 DGIREIKEELGLDV---AFNELIPLGIINYCVNHEDLLDNELAHTFLYKK--NLGFDEFS 134
Query: 144 LQQTEVSAVKYIAYEEYKNLLAKDDP 169
LQ+ EVS + + + ++ +L + P
Sbjct: 135 LQKEEVSGIIKVNFADFIDLWSGVKP 160
>gi|423580183|ref|ZP_17556294.1| hypothetical protein IIA_01698 [Bacillus cereus VD014]
gi|401217638|gb|EJR24332.1| hypothetical protein IIA_01698 [Bacillus cereus VD014]
Length = 202
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|383812305|ref|ZP_09967743.1| peptidase family M49 domain protein [Prevotella sp. oral taxon 306
str. F0472]
gi|383354865|gb|EID32411.1| peptidase family M49 domain protein [Prevotella sp. oral taxon 306
str. F0472]
Length = 701
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 67/424 (15%)
Query: 401 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELD 456
+Y + + + L +A A + + ++ + S + D D I W+ E D+ +D
Sbjct: 266 KYGAAIEKIVYWLEQAKKYAENDQQRHVISLLIKYYTSGDLRDFDVYSIEWLKEQDAHID 325
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
G E Y D + G K ++E + +D AT + + N Q E + P++ ++ + V
Sbjct: 326 FINGFIEVYGDPM-GLKGSWEGIVEYKDLDATHRTQTISTNAQWFEDHSPVNPMFRKEKV 384
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE----AKFKNIL 572
VI GD + NLPN + I + G+ V + N++ A N
Sbjct: 385 KGVTANVICAAMLGGDEYPASAIGINLPNADWIRAEYGSKSVTISNLTHAYDMAAKGNGF 444
Query: 573 RPIADVCIRKEQQELVDFDSFFTHNI---CHECC-HGIG---PHSITLPDGRQSTVRLEL 625
R + I KE L+D + T N+ HEC HG G P T PD L
Sbjct: 445 RE--EFVIDKETCLLMDKYADITDNLHTDLHECLGHGSGRLLPE--TDPDA--------L 492
Query: 626 QELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGCF--RSVRFG--- 677
+ + +EEA+AD+ GL+ + K L L K K+ Y ++ + VR
Sbjct: 493 KNYGNTIEEARADLFGLYYIADDKLLELGLLADKEAYKAQYYGYMMNGLLTQQVRIKPGK 552
Query: 678 -LEESHGKGQALQFNWLFE-----KEAFILHSDDTFSV---------DFDKVEGAVESLS 722
+EESH + +AL W E K ++ DT + D+ +
Sbjct: 553 QIEESHMQNRALIAQWAMELGKEDKVVELIKRMDTTTGKEKTYVRINDYAALRRIFAQEL 612
Query: 723 TEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPV-------DIAPTFTAVN 775
EI I++ GD E+A L+++Y A+Q N+ V +IAP VN
Sbjct: 613 AEIQRIKSEGDFESARKLVERY---------AIQLDSNIHEEVLYRYNRLNIAPYKGFVN 663
Query: 776 KLLQ 779
+L+
Sbjct: 664 PVLK 667
>gi|423383392|ref|ZP_17360648.1| hypothetical protein ICE_01138 [Bacillus cereus BAG1X1-2]
gi|423530157|ref|ZP_17506602.1| hypothetical protein IGE_03709 [Bacillus cereus HuB1-1]
gi|401644252|gb|EJS61946.1| hypothetical protein ICE_01138 [Bacillus cereus BAG1X1-2]
gi|402446672|gb|EJV78530.1| hypothetical protein IGE_03709 [Bacillus cereus HuB1-1]
Length = 202
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + ++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDANDIFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|227486282|ref|ZP_03916598.1| NUDIX hydrolase [Anaerococcus lactolyticus ATCC 51172]
gi|227235693|gb|EEI85708.1| NUDIX hydrolase [Anaerococcus lactolyticus ATCC 51172]
Length = 171
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ ++TG T PR+E G ++ IF++ ELL+Q+RAD K G+W
Sbjct: 2 EILDIYDKDRRRTGKTYPRNEEIPHGGLRLIIHILIFSDKG-ELLIQQRADHK-KMGGLW 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DIS G G+ S A+REL EELGI+ F F I F F D
Sbjct: 60 DISCGGACQMGEDSCEGARRELNEELGID---------FDFSSIRPILTANFAQG-FDDF 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y++ I + LQ+ EV A ++ + E +LLAK + FV Y
Sbjct: 110 YILR--KNIGINELKLQKEEVKAARFASRAEVLDLLAKGE--FVKY 151
>gi|229029697|ref|ZP_04185772.1| MutT/nudix [Bacillus cereus AH1271]
gi|228731639|gb|EEL82546.1| MutT/nudix [Bacillus cereus AH1271]
Length = 202
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QSGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKIHATPFLQLLQREISSFTAISV 165
>gi|392330428|ref|ZP_10275043.1| putative nudix hydrolase [Streptococcus canis FSL Z3-227]
gi|391418107|gb|EIQ80919.1| putative nudix hydrolase [Streptococcus canis FSL Z3-227]
Length = 177
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 24/182 (13%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T +TG R + GDYH V+ +F + + L+ QR+AD K WPG+W
Sbjct: 4 EFWDIYTADRVETGRVMERGSSFKQGDYHLVVHICLFNDKGEMLIQQRQAD-KAGWPGLW 62
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G AG+++ +A REL+EELG++L FT IN G+ F D
Sbjct: 63 DVTVGGSALAGETAQQAAMRELEEELGLSLELTGVRPHFT------INFGE----GFDDT 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY---------DVNGG 179
+LV + LE LQ+ EV AV++ + ++ ++ D+ SF+PY D+ G
Sbjct: 113 FLVQA--SVELENLVLQEEEVQAVRWASCDDILGMI--DEGSFIPYLKSKIHLCFDMVGQ 168
Query: 180 YG 181
YG
Sbjct: 169 YG 170
>gi|229079169|ref|ZP_04211718.1| MutT/nudix [Bacillus cereus Rock4-2]
gi|228704186|gb|EEL56623.1| MutT/nudix [Bacillus cereus Rock4-2]
Length = 202
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|228952366|ref|ZP_04114454.1| MutT/nudix [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|423424046|ref|ZP_17401077.1| hypothetical protein IE5_01735 [Bacillus cereus BAG3X2-2]
gi|423504424|ref|ZP_17481015.1| hypothetical protein IG1_01989 [Bacillus cereus HD73]
gi|449088785|ref|YP_007421226.1| MutT/nudix [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|228807362|gb|EEM53893.1| MutT/nudix [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|401114874|gb|EJQ22732.1| hypothetical protein IE5_01735 [Bacillus cereus BAG3X2-2]
gi|402456293|gb|EJV88067.1| hypothetical protein IG1_01989 [Bacillus cereus HD73]
gi|449022542|gb|AGE77705.1| MutT/nudix [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 202
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|423587574|ref|ZP_17563661.1| hypothetical protein IIE_02986 [Bacillus cereus VD045]
gi|401227311|gb|EJR33840.1| hypothetical protein IIE_02986 [Bacillus cereus VD045]
Length = 202
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|384179949|ref|YP_005565711.1| MutT/Nudix family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324326033|gb|ADY21293.1| MutT/Nudix family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 202
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ + Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDIFIYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDPLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKREISSFTAISV 165
>gi|229178395|ref|ZP_04305764.1| MutT/nudix [Bacillus cereus 172560W]
gi|228605125|gb|EEK62577.1| MutT/nudix [Bacillus cereus 172560W]
Length = 202
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|325842014|ref|ZP_08167551.1| hydrolase, NUDIX family [Turicibacter sp. HGF1]
gi|325489736|gb|EGC92092.1| hydrolase, NUDIX family [Turicibacter sp. HGF1]
Length = 174
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KT T R E G Y V+ IF S E+L+Q+R FK W W
Sbjct: 4 EIWDLYTQDRIKTDKTMIRGEKIIPGLYRLVVHVCIF-NSQGEMLIQQRQPFKSGWSNRW 62
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G +GD+S +A+RE+ EE+G L D T IN ++ F D
Sbjct: 63 DVTVGGSAISGDTSQSAAEREVYEEIGYRLSLDGIRPALT------IN----FDDGFDDF 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
YL+ + ++A LQ EV +VK+ + +E ++ ++ F+PY
Sbjct: 113 YLIQ--QDLEIDALKLQYEEVQSVKWASRDEILKMIQEE--IFIPY 154
>gi|319653469|ref|ZP_08007569.1| hypothetical protein HMPREF1013_04186 [Bacillus sp. 2_A_57_CT2]
gi|317394953|gb|EFV75691.1| hypothetical protein HMPREF1013_04186 [Bacillus sp. 2_A_57_CT2]
Length = 210
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDS 63
++ E L++ ++ G+ R EVH+ G +H T + W + + + Q R+ K
Sbjct: 1 METELLNIFDDNRKQIGVAS-RKEVHKQGHWHETFHCWFVSREKDQDYIYFQYRSKEKKD 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
+PG+ DI++AGH+ + + S++ RE++EELGI++ D + V + + FI+
Sbjct: 60 YPGLLDITAAGHLLSHE-SVMDGMREVEEELGIHV--DFADLVPLGVIDYIAEKENFIDK 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
E A V+L + LE F+ Q EV+ + IA EE+ L
Sbjct: 117 ELAHVFLYHS--NYSLEEFSPQPEEVTGIYQIAMEEFYGL 154
>gi|52143452|ref|YP_083375.1| MutT/Nudix family protein [Bacillus cereus E33L]
gi|51976921|gb|AAU18471.1| MutT/Nudix family protein [Bacillus cereus E33L]
Length = 202
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHNEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF+ V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKREVSSFIAISV 165
>gi|229069539|ref|ZP_04202828.1| MutT/nudix [Bacillus cereus F65185]
gi|229190093|ref|ZP_04317099.1| MutT/nudix [Bacillus cereus ATCC 10876]
gi|423414330|ref|ZP_17391450.1| hypothetical protein IE1_03634 [Bacillus cereus BAG3O-2]
gi|423429886|ref|ZP_17406890.1| hypothetical protein IE7_01702 [Bacillus cereus BAG4O-1]
gi|423435461|ref|ZP_17412442.1| hypothetical protein IE9_01642 [Bacillus cereus BAG4X12-1]
gi|228593422|gb|EEK51235.1| MutT/nudix [Bacillus cereus ATCC 10876]
gi|228713678|gb|EEL65564.1| MutT/nudix [Bacillus cereus F65185]
gi|401097923|gb|EJQ05942.1| hypothetical protein IE1_03634 [Bacillus cereus BAG3O-2]
gi|401122192|gb|EJQ29981.1| hypothetical protein IE7_01702 [Bacillus cereus BAG4O-1]
gi|401125699|gb|EJQ33459.1| hypothetical protein IE9_01642 [Bacillus cereus BAG4X12-1]
Length = 202
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|154483076|ref|ZP_02025524.1| hypothetical protein EUBVEN_00774 [Eubacterium ventriosum ATCC
27560]
gi|210610482|ref|ZP_03288439.1| hypothetical protein CLONEX_00629 [Clostridium nexile DSM 1787]
gi|149736161|gb|EDM52047.1| hydrolase, NUDIX family [Eubacterium ventriosum ATCC 27560]
gi|210152475|gb|EEA83481.1| hypothetical protein CLONEX_00629 [Clostridium nexile DSM 1787]
Length = 163
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ +K+GIT R E+ G YH +V+ WI + Q LL QR K +P W
Sbjct: 4 EKWDLYNAKREKSGITVCRGEIIPKGLYHLSVSVWIVNQQGQYLLSQRHP--KKQYPLYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G + +G++SL A RE++EELGI L + + ++ ++NV +F DV
Sbjct: 62 E-CTGGSVLSGETSLQGAIREVKEELGILLTPGSEKLIYQSRRENV--------QDFYDV 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYI 155
+L I +E LQ+TEV V+++
Sbjct: 113 WLFH--KDIKIEEMRLQETEVVDVQWV 137
>gi|227498617|ref|ZP_03928761.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683920|ref|YP_004895904.1| hypothetical protein Acin_0522 [Acidaminococcus intestini RyC-MR95]
gi|226904073|gb|EEH89991.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278574|gb|AEQ21764.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 165
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
E+ D+ ++TG T R++ H + GDYH TV A I E+ + LL QR+ D K PG
Sbjct: 2 EYWDIYDEKKERTGRTMARNDWHMKPGDYHLTVLALIINETGRILLTQRQLD-KQWAPGK 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG-KFINNEFA 126
W+I G + AG++SL + RE +EE G+ K A + T+ ND K NN F
Sbjct: 61 WEIPGGG-VKAGETSLEAVLRETREETGLVPDKAAVRLIHTYR-----NDSPKEQNNYFV 114
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSA 151
D+Y V P A T+Q+ EV
Sbjct: 115 DIYEVRL--PFTESAVTVQKEEVKG 137
>gi|167633054|ref|ZP_02391380.1| mutT/nudix family protein [Bacillus anthracis str. A0442]
gi|254741264|ref|ZP_05198952.1| mutT/nudix family protein [Bacillus anthracis str. Kruger B]
gi|167531866|gb|EDR94531.1| mutT/nudix family protein [Bacillus anthracis str. A0442]
Length = 202
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR G++H T + W + T+++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGNWHETFHCWFVEKDTEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL K+ SF V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKKEISSFTAISV 165
>gi|320528326|ref|ZP_08029488.1| hydrolase, NUDIX family [Solobacterium moorei F0204]
gi|320131240|gb|EFW23808.1| hydrolase, NUDIX family [Solobacterium moorei F0204]
Length = 172
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 36 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELG 95
YH V+ IF Q +L+Q+R FK+ WP MWD++ G ++S +A R + EELG
Sbjct: 29 YHLVVHVCIFNAKNQ-MLIQQRQSFKEGWPNMWDVTVGGSAIIDENSRQAAMRGVAEELG 87
Query: 96 INLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYI 155
+ + + V T K+ + F D+Y++ I + LQ EV AVK+
Sbjct: 88 LKIDLENTSPVIT----------KYFSEGFDDIYILE--KEIDISKLILQYEEVQAVKWA 135
Query: 156 AYEEYKNLLAKDDPSFVPYD 175
EE +++ F+PYD
Sbjct: 136 GIEEILDMIGL--KKFIPYD 153
>gi|222095614|ref|YP_002529671.1| mutt/nudix family protein [Bacillus cereus Q1]
gi|221239672|gb|ACM12382.1| MutT/Nudix family protein [Bacillus cereus Q1]
Length = 202
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + ++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDTDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y ++P+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVIDPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V I + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKIHATSFLQLLKREISSFTAISV 165
>gi|326693095|ref|ZP_08230100.1| NTP pyrophosphohydrolase including oxidative damage repair enzymes
[Leuconostoc argentinum KCTC 3773]
Length = 172
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV ++TG T R + + GDYH N IF S ++LLQ+RA K S PG+W
Sbjct: 11 ECWDVYNAQKERTGRTHRRGQQLQPGDYHLVTNGLIF-NSKGDVLLQQRAFDKLSHPGIW 69
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ G + G++S + REL EELG+ + D F+ T + I D
Sbjct: 70 TADTGGAVLVGETSQQALVRELFEELGLIVSSDELVFIETLRYTDWIED----------- 118
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
+ L P+ AF LQ EV AV+++++ E
Sbjct: 119 WYAIRLPDQPV-AFQLQIAEVVAVRWVSFAE 148
>gi|407012916|gb|EKE27144.1| hypothetical protein ACD_4C00028G0006 [uncultured bacterium (gcode
4)]
Length = 234
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 11 LDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDI 70
LDVL T K +VH D+H ++ WIF E + +L+++R K P WD+
Sbjct: 57 LDVLNENWDFTWTIKRWQDVHECWDWHWALHLWIFNEENK-ILIRKRPQNKSVNPLKWDV 115
Query: 71 SSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
HI D+ L +A ++ ELGIN+ + F+F +++ N+ +I+NE V+
Sbjct: 116 GCWWHIFPWDNGLETAVKKALFELGINIAEKDINFLFVLNNKSIFNNWTYIDNEIFYVFS 175
Query: 131 V------TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+ T LNP ++ + ++I EE KN++ D F+
Sbjct: 176 INIDTNDTKLNP--------KKEYMEDFRFIDIEELKNIIDNKDEDFI 215
>gi|223938518|ref|ZP_03630410.1| NUDIX hydrolase [bacterium Ellin514]
gi|223892780|gb|EEF59249.1| NUDIX hydrolase [bacterium Ellin514]
Length = 177
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E DV+ + G K R EVHR+G HR V+ +F S E+ LQ+R+ KD++PG+
Sbjct: 8 DEIFDVVNEFDEVVGREK-RGEVHRLGLRHRAVHVLVF-NSRGEVFLQKRSMKKDTFPGV 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINL 98
WD SS+GH+ +G+ A REL EE+G+ L
Sbjct: 66 WDSSSSGHLDSGEDYDSCAVRELWEEIGLKL 96
>gi|421189900|ref|ZP_15647208.1| NUDIX family hydrolase [Oenococcus oeni AWRIB422]
gi|421191084|ref|ZP_15648367.1| NUDIX family hydrolase [Oenococcus oeni AWRIB548]
gi|399971556|gb|EJO05797.1| NUDIX family hydrolase [Oenococcus oeni AWRIB422]
gi|399973271|gb|EJO07447.1| NUDIX family hydrolase [Oenococcus oeni AWRIB548]
Length = 177
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 18/176 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L G+K G+ K R E + G++H VNA IF E+L+Q+R+ K PG W
Sbjct: 15 ESWDLLNKEGRKIGL-KHRGEPFKPGEWHSLVNASIF-NYQHEILMQQRSFNKIGRPGEW 72
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D + G + A + SL + +RE++EE+G+ L FV TF V F +
Sbjct: 73 DFETGGSVLASEDSLTAIKREVKEEVGLELNFSEENFVETFRNWPV----------FDNW 122
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLF 184
Y++ + + ++ +Q++E+ K++ +++ L+ + ++PY + Y +LF
Sbjct: 123 YVIK--DDLSIKDIRIQKSELEQAKFMPFDQAIKYLSSN---YLPYLLK-AYKKLF 172
>gi|359413591|ref|ZP_09206056.1| NUDIX hydrolase [Clostridium sp. DL-VIII]
gi|357172475|gb|EHJ00650.1| NUDIX hydrolase [Clostridium sp. DL-VIII]
Length = 193
Score = 70.9 bits (172), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 14/140 (10%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELL--LQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
R E+H+ G H+ V+ WI + ++ LQ+R+ K +PGM+DI+ AGHI AG+ +
Sbjct: 20 RDEIHKRGLKHKVVHCWIIEKEVNDVFIYLQQRSYSKSDFPGMYDIACAGHIDAGEEAEN 79
Query: 85 SAQRELQEELGINLPKDAFEFV---FTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
+ REL+EE+G+ + K +++ F Q++ D +E ++YL+ N
Sbjct: 80 AMLRELKEEVGLKINKGDLKYIGRKFETFQKDCFKD-----DEICEMYLLEVNNS---NI 131
Query: 142 FTLQQTEVSAVKYIAYEEYK 161
F L + EV V ++ EY+
Sbjct: 132 FILGE-EVEDVVKVSLNEYR 150
>gi|381151115|ref|ZP_09862984.1| isopentenyldiphosphate isomerase [Methylomicrobium album BG8]
gi|380883087|gb|EIC28964.1| isopentenyldiphosphate isomerase [Methylomicrobium album BG8]
Length = 175
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 10 HLDVLTMTGQKTGI--TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
H ++L + + + T PR VH HR V+ +F +S + L LQ+R+ KD PG+
Sbjct: 6 HQELLAVVDENDSVIGTSPRHLVHTSLMRHRAVHILVFDDSGR-LFLQKRSMLKDLNPGL 64
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD S+AGH+ AG+ A REL+EELG+ + F +G EF
Sbjct: 65 WDTSAAGHVDAGEDYNSCAVRELREELGV---EHRGPLTPVFKMPPTAENGM----EFVQ 117
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
VY VT P F L E+ + A +E + DD + P
Sbjct: 118 VYRVTHNGP-----FALAADEIDEGGWFAPDEVDARVKADDQNLTP 158
>gi|419859112|ref|ZP_14381768.1| NUDIX family hydrolase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497132|gb|EKP88608.1| NUDIX family hydrolase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 177
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 18/176 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L G+K G+ K R E + G++H VNA IF E+L+Q+R+ K PG W
Sbjct: 15 ESWDLLNKEGRKIGL-KHRGEPFKPGEWHSLVNASIF-NYQHEILMQQRSFNKIGRPGEW 72
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D + G + A + SL + +RE++EE+G+ L FV TF V F +
Sbjct: 73 DFETGGSVLASEDSLTAIKREVKEEVGLELNFSEENFVETFRNWPV----------FDNW 122
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLF 184
Y++ + ++ +Q++E+ K++ +++ L+ + ++PY + Y +LF
Sbjct: 123 YVIKA--DLSIKDIRIQKSELEQAKFMPFDQAIKYLSSN---YLPYLLK-AYKKLF 172
>gi|229172685|ref|ZP_04300243.1| MutT/nudix [Bacillus cereus MM3]
gi|228610817|gb|EEK68081.1| MutT/nudix [Bacillus cereus MM3]
Length = 209
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRA 58
MAE +Q + T + K R EVHR GD+H T + W + +++ L Q R+
Sbjct: 1 MAERGIQMTEWLTIFDTERNILGKKLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRS 60
Query: 59 DFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKD--AFEFVFTF-LQQNVI 115
K PG+WDI+SAGHI + I RE++EELG+ A++ +F + + +
Sbjct: 61 KNKKEAPGIWDITSAGHIMHDEDVQIGGLREIEEELGLFFQTTDLAYKGIFKIDYEISNL 120
Query: 116 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
D +F + F +V + TL+ P E EV V I + LL ++ SF
Sbjct: 121 TDREFCHMYFHNV--INTLSFAPGE-------EVDDVMKIHATSFLQLLKREISSFTAIS 171
Query: 176 V 176
V
Sbjct: 172 V 172
>gi|218896951|ref|YP_002445362.1| mutT/nudix family protein [Bacillus cereus G9842]
gi|218542395|gb|ACK94789.1| mutT/nudix family protein [Bacillus cereus G9842]
Length = 202
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDNEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLIYKGIFKIDYEISN--LTDREFCHMYFHNVNNPLPF 132
>gi|253573410|ref|ZP_04850753.1| hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846938|gb|EES74943.1| hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 210
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE---LLLQRRADFKDSWP 65
E D+ T +K G T R EVH G +H+T + WI Q LL QRR KD +P
Sbjct: 5 EMFDIYTKDMKKLG-TASREEVHAKGWWHQTFHCWIIKRDAQGEIYLLFQRRHPNKDVFP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
+ D S AGH+ AG+ + REL+EELG+ +P + ++ Q++ + I+ E
Sbjct: 64 LLLDTSCAGHLQAGEDA-KDGIRELEEELGLAVPVEDLTYLGRVAQEHFPSP-DLIDREV 121
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
V++ N PL + +Q E++ + ++ ++ L
Sbjct: 122 NHVFIYE--NEKPLLDYRIQTEELTGLYWVGMLAFQEL 157
>gi|75762522|ref|ZP_00742380.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228900588|ref|ZP_04064810.1| MutT/nudix [Bacillus thuringiensis IBL 4222]
gi|228964981|ref|ZP_04126083.1| MutT/nudix [Bacillus thuringiensis serovar sotto str. T04001]
gi|402560798|ref|YP_006603522.1| mutT/nudix family protein [Bacillus thuringiensis HD-771]
gi|434374932|ref|YP_006609576.1| mutT/nudix family protein [Bacillus thuringiensis HD-789]
gi|74489985|gb|EAO53343.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228794722|gb|EEM42226.1| MutT/nudix [Bacillus thuringiensis serovar sotto str. T04001]
gi|228859071|gb|EEN03509.1| MutT/nudix [Bacillus thuringiensis IBL 4222]
gi|401789450|gb|AFQ15489.1| mutT/nudix family protein [Bacillus thuringiensis HD-771]
gi|401873489|gb|AFQ25656.1| mutT/nudix family protein [Bacillus thuringiensis HD-789]
Length = 202
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDNEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLIYKGIFKIDYEISN--LTDREFCHMYFHNVNNPLPF 132
>gi|116490732|ref|YP_810276.1| NUDIX family hydrolase [Oenococcus oeni PSU-1]
gi|290890152|ref|ZP_06553234.1| hypothetical protein AWRIB429_0624 [Oenococcus oeni AWRIB429]
gi|419757723|ref|ZP_14284051.1| NUDIX family hydrolase [Oenococcus oeni AWRIB304]
gi|419857369|ref|ZP_14380078.1| NUDIX family hydrolase [Oenococcus oeni AWRIB202]
gi|421184124|ref|ZP_15641550.1| NUDIX family hydrolase [Oenococcus oeni AWRIB318]
gi|421187667|ref|ZP_15645015.1| NUDIX family hydrolase [Oenococcus oeni AWRIB419]
gi|421193898|ref|ZP_15651139.1| NUDIX family hydrolase [Oenococcus oeni AWRIB553]
gi|421194628|ref|ZP_15651846.1| NUDIX family hydrolase [Oenococcus oeni AWRIB568]
gi|421196573|ref|ZP_15653756.1| NUDIX family hydrolase [Oenococcus oeni AWRIB576]
gi|116091457|gb|ABJ56611.1| NUDIX family hydrolase [Oenococcus oeni PSU-1]
gi|290480196|gb|EFD88838.1| hypothetical protein AWRIB429_0624 [Oenococcus oeni AWRIB429]
gi|399905540|gb|EJN92980.1| NUDIX family hydrolase [Oenococcus oeni AWRIB304]
gi|399967504|gb|EJO01984.1| NUDIX family hydrolase [Oenococcus oeni AWRIB419]
gi|399967920|gb|EJO02378.1| NUDIX family hydrolase [Oenococcus oeni AWRIB318]
gi|399971111|gb|EJO05400.1| NUDIX family hydrolase [Oenococcus oeni AWRIB553]
gi|399976556|gb|EJO10570.1| NUDIX family hydrolase [Oenococcus oeni AWRIB576]
gi|399977333|gb|EJO11314.1| NUDIX family hydrolase [Oenococcus oeni AWRIB568]
gi|410498112|gb|EKP89573.1| NUDIX family hydrolase [Oenococcus oeni AWRIB202]
Length = 177
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 18/176 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L G+K G+ K R E + G++H VNA IF E+L+Q+R+ K PG W
Sbjct: 15 ESWDLLNKEGRKIGL-KHRGEPFKPGEWHSLVNASIF-NYQHEILMQQRSFNKIGRPGEW 72
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D + G + A + SL + +RE++EE+G+ L FV TF V F +
Sbjct: 73 DFETGGSVLASEDSLTAIKREVKEEVGLELNFSEENFVETFRNWPV----------FDNW 122
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLF 184
Y++ + ++ +Q++E+ K++ +++ L+ + ++PY + Y +LF
Sbjct: 123 YVIKA--DLSIKDIRIQKSELEQAKFMPFDQAIKYLSSN---YLPYLLK-AYKKLF 172
>gi|228920695|ref|ZP_04084038.1| MutT/nudix [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423637296|ref|ZP_17612949.1| hypothetical protein IK7_03705 [Bacillus cereus VD156]
gi|228838996|gb|EEM84294.1| MutT/nudix [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401273239|gb|EJR79224.1| hypothetical protein IK7_03705 [Bacillus cereus VD156]
Length = 202
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAKDIFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
RE++EELG++ + F I++ + EF +Y +NP+P
Sbjct: 78 QSGGLREIEEELGLSFQTTDLAYKGIFKIDYEISN--LTDREFCHMYFHNVINPLPF 132
>gi|423563629|ref|ZP_17539905.1| hypothetical protein II5_03033 [Bacillus cereus MSX-A1]
gi|401198123|gb|EJR05043.1| hypothetical protein II5_03033 [Bacillus cereus MSX-A1]
Length = 202
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDNEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLIYKGIFKIDYEISN--LTDREFCHMYFHNVNNPLPF 132
>gi|423362003|ref|ZP_17339505.1| hypothetical protein IC1_03982 [Bacillus cereus VD022]
gi|401078894|gb|EJP87199.1| hypothetical protein IC1_03982 [Bacillus cereus VD022]
Length = 202
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPCIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y NP+P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLIYKGIFKIDYEISN--LTDREFCHMYFHNVNNPLPF 132
>gi|171911937|ref|ZP_02927407.1| dimethyladenosine transferase [Verrucomicrobium spinosum DSM 4136]
Length = 441
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR EVH G HR V+ ++F + EL LQ+R+ KD P WD S+AGH+ +G+ S
Sbjct: 297 PRGEVHAKGLKHRAVHIFVFNKHG-ELWLQKRSHLKDVHPLTWDSSAAGHLDSGEDYATS 355
Query: 86 AQRELQEELGINLP 99
A RELQEE+GI+ P
Sbjct: 356 AARELQEEIGISAP 369
>gi|325111317|ref|YP_004272385.1| NUDIX hydrolase [Planctomyces brasiliensis DSM 5305]
gi|324971585|gb|ADY62363.1| NUDIX hydrolase [Planctomyces brasiliensis DSM 5305]
Length = 175
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
+ PRSEVH G HR + W+F S+ ELL+ RA K+ P W S+AGH++AG+S
Sbjct: 22 SAPRSEVHGQGLLHRASHIWVF-NSSNELLIHLRAAGKEEEPLKWTSSAAGHLAAGESYA 80
Query: 84 ISAQRELQEELGIN 97
+A+RELQEELG+
Sbjct: 81 SAAERELQEELGLQ 94
>gi|293376461|ref|ZP_06622690.1| hydrolase, NUDIX family [Turicibacter sanguinis PC909]
gi|292644883|gb|EFF62964.1| hydrolase, NUDIX family [Turicibacter sanguinis PC909]
Length = 174
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KT T R + G Y V+ IF S E+L+Q+R FK W W
Sbjct: 4 EIWDLYTQDRIKTDKTMIRGQKIIPGLYRLVVHVCIF-NSQGEMLIQQRQPFKSGWSNRW 62
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D++ G +GD+S +A+RE+ EE+G L D T IN ++ F D
Sbjct: 63 DVTVGGSAISGDTSQSAAEREVYEEIGYRLSLDGIRPALT------IN----FDDGFDDF 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
YL+ + ++A LQ EV +VK+ + +E ++ ++ F+PY
Sbjct: 113 YLIQ--QDLEIDALKLQYEEVQSVKWASRDEILKMIQEE--IFIPY 154
>gi|196041912|ref|ZP_03109200.1| MutT/NUDIX family protein [Bacillus cereus NVH0597-99]
gi|196027284|gb|EDX65903.1| MutT/NUDIX family protein [Bacillus cereus NVH0597-99]
Length = 202
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 134 P----GEEVDDVMKVHTTSFLQLLKREISSFTAISV 165
>gi|357239554|ref|ZP_09126889.1| hydrolase, NUDIX family [Streptococcus ictaluri 707-05]
gi|356752123|gb|EHI69253.1| hydrolase, NUDIX family [Streptococcus ictaluri 707-05]
Length = 173
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
DV + TG T R YH V+ +F E+L+Q+R D K WP WD++
Sbjct: 6 DVYARNHELTGQTMERGSSFENDCYHLVVHLCLFNRQG-EMLIQQRQDDKAGWPSYWDLT 64
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
G G++S ++A+REL EELG+ + + FT IN ++ F D++L+
Sbjct: 65 VGGSALTGETSQVAAERELFEELGLKINLNELRPQFT------IN----FDHGFDDIFLL 114
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY---------DVNGGYG 181
+ + + Q EV A K+ + E ++ + +F+PY D+ G YG
Sbjct: 115 E--KEVDINSLVFQAEEVQAAKWASKAEINRMIT--EGTFIPYYPSLIDLCFDLVGKYG 169
>gi|300117565|ref|ZP_07055352.1| mutT/nudix family protein [Bacillus cereus SJ1]
gi|298725100|gb|EFI65755.1| mutT/nudix family protein [Bacillus cereus SJ1]
Length = 202
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 134 P----GEEVDDVMKVHTTSFLQLLKREISSFTAISV 165
>gi|229160980|ref|ZP_04288969.1| MutT/nudix [Bacillus cereus R309803]
gi|228622548|gb|EEK79385.1| MutT/nudix [Bacillus cereus R309803]
Length = 202
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 17 TGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAG 74
T + T K R EVHR D+H T + W + +++ L Q R+ K P +WDI+SAG
Sbjct: 10 TERNTLGKKLRDEVHRDDDWHETFHCWFVEKDAEDIFLYFQLRSKNKKEAPCIWDITSAG 69
Query: 75 HISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTL 134
HI + I RE++EELG++ + F I++ + EF +Y +
Sbjct: 70 HIMHDEKVDIGGLREIEEELGLSFQTADLAYKGIFKIDYEISN--LTDREFCHMYFHNVI 127
Query: 135 NPIPL 139
NP+P
Sbjct: 128 NPLPF 132
>gi|384207731|ref|YP_005593451.1| nudix hydrolase [Brachyspira intermedia PWS/A]
gi|343385381|gb|AEM20871.1| nudix hydrolase [Brachyspira intermedia PWS/A]
Length = 168
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D+ + KTG R + DYH ++AW+ S E+++ +R K P MW+
Sbjct: 6 DIYDINKNKTGRFHQRGIPLKKNDYHIVIHAWV-VNSNDEVIITKRHKSKKVCPNMWE-C 63
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
+ G I AG+ S A RELQEE+G++ KD F+ +F+ + +N D Y+
Sbjct: 64 TEGSILAGEDSADGALRELQEEIGLSFKKDEAVFLTSFVLE--------FSNTIVDSYMF 115
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
+ +E LQ+ EVS + E+Y
Sbjct: 116 RR--DVNIEDLVLQENEVSDAMIVNREKY 142
>gi|423617836|ref|ZP_17593670.1| hypothetical protein IIO_03162 [Bacillus cereus VD115]
gi|401254601|gb|EJR60828.1| hypothetical protein IIO_03162 [Bacillus cereus VD115]
Length = 201
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + + + L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDENMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + I++ + EF +Y + +P F
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIYKIDYEISN--LTDREFCHMYFHNVIKSLP---F 132
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
T + EV V + + LL ++ SF V
Sbjct: 133 TPGE-EVDDVMKVHATAFLQLLKREISSFTAISV 165
>gi|197123453|ref|YP_002135404.1| hypothetical protein AnaeK_3053 [Anaeromyxobacter sp. K]
gi|196173302|gb|ACG74275.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
Length = 664
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 27/334 (8%)
Query: 436 FLSNNYYDSDIAWIELDSELD---VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVK 492
F + +D AW +++E + + P ETY D KA FE + D + A +
Sbjct: 301 FRDGGWERADEAWASMNAENSRWFLRVAPDETYSDPC-ALKAGFELALARIDPGSLAWQR 359
Query: 493 LFGDNLQVLEQNLP--MDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQ--TVAFNLPNDER 548
Q +E L Y ++ V I + N+GD + P+ TV +LPN +
Sbjct: 360 RLEPVKQDMEAALARLAGPPYAARPVAFHLPDFIAIALNAGDARAPRGATVGQSLPNWGK 419
Query: 549 IVKD-RGTSMVMLKNVSEAKFKNILRPIAD--VCIRKEQQELVDFDSFFTHNICHECCHG 605
+ + RG ++ M ++ + I R A +C + D D+ + HE H
Sbjct: 420 VANEGRGRTVAMTNFYTDPESLEIRRRRAASVLCADTMARRTPDPDAERMGFVLHEAAHN 479
Query: 606 IGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVS 665
+GP +GR +T ++ L + +EE KA L+ +L R ++ + +
Sbjct: 480 LGPSHEYAVEGRTAT-QIFGGNLAAMLEELKAQQSALYLAGWLAERGVISPAQADRALLE 538
Query: 666 FLAGCFRSVRFGLEESHGKGQALQFN---------------WLFEKEAFILHSDDTFSVD 710
+ F V G+ S G+ + W E +A + +D
Sbjct: 539 NVVWAFGQVSVGVRTSDGRLRPYSALAAIQLAALADDGALVWRPEAKAANGEDEGCLELD 598
Query: 711 FDKVEGAVESLSTEILTIQARGDKEAASLLLQKY 744
++ +VE L L I+ARGD+ AA L+Q +
Sbjct: 599 RPRLGASVERLEALALGIKARGDRPAAEALVQAH 632
>gi|339498489|ref|ZP_08659465.1| NUDIX hydrolase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 173
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV T Q TG T R E G+YH NA +F + ELL+Q+R+ K + PG W
Sbjct: 11 ELWDVYTRQRQLTGRTHRRGEPLAQGEYHMVANALVFNQDG-ELLVQQRSFKKMALPGGW 69
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+++ G + G++SL QRE+ EELG FE + T +++ F D+
Sbjct: 70 VLATGGSVLQGETSLEGIQREVVEELGAQATH--FERIRTSWEKDW----------FDDL 117
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
Y VT +N PL++ +Q +EV V +++ + + DP ++ D+
Sbjct: 118 Y-VTRINQ-PLDSLKIQTSEVEQVTWLSIPAAQRI--SSDPDYLDDDI 161
>gi|409385101|ref|ZP_11237817.1| NUDIX hydrolase [Lactococcus raffinolactis 4877]
gi|399207404|emb|CCK18732.1| NUDIX hydrolase [Lactococcus raffinolactis 4877]
Length = 170
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ +TG T R++ + ++ V+ I Q LL+Q+ K WPG W
Sbjct: 2 ELFDIYDDERNRTGRTAERNQKLKGSEHQLIVHVNIMNTQNQ-LLIQQSQPHKPDWPGYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DIS G + +G++S +A+RE+ EELG+ + L Q V N FAD
Sbjct: 61 DISVGGGVQSGETSREAAEREVFEELGLEID----------LAQAVPYFWIHFPNGFADE 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y+V + L LQ TEV VK+ +Y+E ++ + +F PY
Sbjct: 111 YIVH--QDLNLGKLNLQPTEVQGVKWASYDEVMCMMKEG--TFFPY 152
>gi|423524157|ref|ZP_17500630.1| hypothetical protein IGC_03540 [Bacillus cereus HuA4-10]
gi|401170000|gb|EJQ77241.1| hypothetical protein IGC_03540 [Bacillus cereus HuA4-10]
Length = 202
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K PG+WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDDEDMFLYFQLRSKNKKEAPGIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + I++ + EF +Y + P+
Sbjct: 78 QIGGLREVEEELGLSFQTTDLAYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLLFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL KD S V
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKKDISSITTISV 165
>gi|389815134|ref|ZP_10206493.1| Nudix hydrolase [Planococcus antarcticus DSM 14505]
gi|388466205|gb|EIM08512.1| Nudix hydrolase [Planococcus antarcticus DSM 14505]
Length = 209
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDS 63
++ E L + G++ GI R EVH G +H T + WI + LQ R+ K
Sbjct: 1 METEKLRIYDEQGRQQGIAD-RKEVHEKGYWHETFHCWIAGRQNNRDVVYLQLRSKEKKD 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
+PG++DI++AGH+ D ++ RE++EELGI + ++ Q V++D F +N
Sbjct: 60 FPGLFDITAAGHLLT-DETVEDGIREVREELGIQVDLADLTYIGMIKDQIVLSD--FFDN 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
E +L L + F LQ EVS + + +E +L
Sbjct: 117 ERCHCFLYKDLKNLD-HRFELQLEEVSGMGKLDFEALADL 155
>gi|323485908|ref|ZP_08091243.1| hypothetical protein HMPREF9474_02994 [Clostridium symbiosum
WAL-14163]
gi|323400896|gb|EGA93259.1| hypothetical protein HMPREF9474_02994 [Clostridium symbiosum
WAL-14163]
Length = 161
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ +K+GI R E+ G YH +V+ WI + Q LL QR K +P W
Sbjct: 2 EKWDLYNAKREKSGIAVCRGEIIPKGLYHLSVSVWIVNQQGQYLLSQRHP--KKQYPLYW 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G + +G++SL A RE++EELGI L + + ++ ++NV +F DV
Sbjct: 60 E-CTGGSVLSGETSLQGAIREVKEELGILLTPGSEKLIYQTRRENV--------QDFYDV 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYI 155
+L I +E LQ+TEV V+++
Sbjct: 111 WLFH--KDIKIEEMRLQETEVVDVQWV 135
>gi|392958080|ref|ZP_10323598.1| hypothetical protein A374_15107 [Bacillus macauensis ZFHKF-1]
gi|391875863|gb|EIT84465.1| hypothetical protein A374_15107 [Bacillus macauensis ZFHKF-1]
Length = 208
Score = 69.3 bits (168), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSW 64
++E L + G+ RS+VHR+G +H + W + + + LQ R++ K +
Sbjct: 3 EQEKLKIFDDNKNLIGVAT-RSDVHRIGYWHEAFHCWFVSNEQGIDYIYLQLRSNNKKDY 61
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF--LQQNVINDGKFIN 122
P + DI++AGH+ A D ++ RE++EE+GI+L AF+ + + V+ +G FI+
Sbjct: 62 PNLLDITAAGHLLA-DETVEDGVREIKEEIGIDL---AFKELIRLGVIDYCVVQEG-FID 116
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
E A+V+L N + FTLQ EVS + + ++ L
Sbjct: 117 KELANVFLYKCGN--IFDDFTLQVDEVSGIVKTKFIDFTQL 155
>gi|299538220|ref|ZP_07051505.1| putative Nudix hydrolase [Lysinibacillus fusiformis ZC1]
gi|424736267|ref|ZP_18164727.1| putative Nudix hydrolase [Lysinibacillus fusiformis ZB2]
gi|298726422|gb|EFI67012.1| putative Nudix hydrolase [Lysinibacillus fusiformis ZC1]
gi|422949870|gb|EKU44243.1| putative Nudix hydrolase [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++E + V ++ G T R+EVH G +H T + W+ E + Q R+ K +P
Sbjct: 1 MEQEIVKVFNEQHEQIG-TATRAEVHEKGLWHETFHCWLVNEDY--IYFQVRSSQKKDYP 57
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+ DI++AGH+ A + ++ S RE++EELG+N+ D E V + I I+NEF
Sbjct: 58 GLLDITAAGHLLAIE-TVESGIREVKEELGLNI--DVHEVVKMGMTSCSIVSENMIDNEF 114
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAV 152
VY+ + ++F LQ EVS V
Sbjct: 115 CHVYIYPFKH--DWDSFALQYEEVSGV 139
>gi|49477452|ref|YP_036129.1| MutT/Nudix family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218903117|ref|YP_002450951.1| mutT/nudix family protein [Bacillus cereus AH820]
gi|228945607|ref|ZP_04107957.1| MutT/nudix [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229121543|ref|ZP_04250770.1| MutT/nudix [Bacillus cereus 95/8201]
gi|49329008|gb|AAT59654.1| MutT/Nudix family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218538040|gb|ACK90438.1| mutT/nudix family protein [Bacillus cereus AH820]
gi|228662007|gb|EEL17620.1| MutT/nudix [Bacillus cereus 95/8201]
gi|228814125|gb|EEM60396.1| MutT/nudix [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 202
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F I++ + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLTYKGIFTIDYEISN--LTDREFCHMYFHNVIDSLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKREISSFTAISV 165
>gi|229017302|ref|ZP_04174206.1| MutT/nudix [Bacillus cereus AH1273]
gi|229023478|ref|ZP_04179975.1| MutT/nudix [Bacillus cereus AH1272]
gi|423391719|ref|ZP_17368945.1| hypothetical protein ICG_03567 [Bacillus cereus BAG1X1-3]
gi|228737831|gb|EEL88330.1| MutT/nudix [Bacillus cereus AH1272]
gi|228744003|gb|EEL94101.1| MutT/nudix [Bacillus cereus AH1273]
gi|401637552|gb|EJS55305.1| hypothetical protein ICG_03567 [Bacillus cereus BAG1X1-3]
Length = 202
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKDAPSIWDITSAGHIMHDEEV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F +++ + EF +Y + P+P
Sbjct: 78 EIGGLREIEEELGLSFQTTDLAYKGIFKIDYELSN--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKD 167
EV V + + LL +D
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKRD 156
>gi|30261995|ref|NP_844372.1| mutT/nudix family protein [Bacillus anthracis str. Ames]
gi|47527261|ref|YP_018610.1| mutT/nudix family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49184835|ref|YP_028087.1| mutT/nudix family protein [Bacillus anthracis str. Sterne]
gi|65319278|ref|ZP_00392237.1| COG0494: NTP pyrophosphohydrolases including oxidative damage
repair enzymes [Bacillus anthracis str. A2012]
gi|165870213|ref|ZP_02214869.1| mutT/nudix family protein [Bacillus anthracis str. A0488]
gi|167638302|ref|ZP_02396579.1| mutT/nudix family protein [Bacillus anthracis str. A0193]
gi|170686536|ref|ZP_02877757.1| mutT/nudix family protein [Bacillus anthracis str. A0465]
gi|170706029|ref|ZP_02896491.1| mutT/nudix family protein [Bacillus anthracis str. A0389]
gi|177650964|ref|ZP_02933861.1| mutT/nudix family protein [Bacillus anthracis str. A0174]
gi|190566352|ref|ZP_03019270.1| mutT/nudix family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227815215|ref|YP_002815224.1| mutT/nudix family protein [Bacillus anthracis str. CDC 684]
gi|228914584|ref|ZP_04078193.1| MutT/nudix [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228933294|ref|ZP_04096150.1| MutT/nudix [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|229090978|ref|ZP_04222202.1| MutT/nudix [Bacillus cereus Rock3-42]
gi|229604158|ref|YP_002866364.1| MutT/NUDIX family protein [Bacillus anthracis str. A0248]
gi|254684560|ref|ZP_05148420.1| mutT/nudix family protein [Bacillus anthracis str. CNEVA-9066]
gi|254721318|ref|ZP_05183108.1| mutT/nudix family protein [Bacillus anthracis str. A1055]
gi|254734864|ref|ZP_05192576.1| mutT/nudix family protein [Bacillus anthracis str. Western North
America USA6153]
gi|254755519|ref|ZP_05207553.1| mutT/nudix family protein [Bacillus anthracis str. Vollum]
gi|254760055|ref|ZP_05212079.1| mutT/nudix family protein [Bacillus anthracis str. Australia 94]
gi|301053520|ref|YP_003791731.1| MutT/Nudix family protein [Bacillus cereus biovar anthracis str.
CI]
gi|386735735|ref|YP_006208916.1| MutT/nudix family protein [Bacillus anthracis str. H9401]
gi|421510078|ref|ZP_15956977.1| MutT/nudix family protein [Bacillus anthracis str. UR-1]
gi|421635792|ref|ZP_16076391.1| MutT/nudix family protein [Bacillus anthracis str. BF1]
gi|423552282|ref|ZP_17528609.1| hypothetical protein IGW_02913 [Bacillus cereus ISP3191]
gi|30256621|gb|AAP25858.1| mutT/nudix family protein [Bacillus anthracis str. Ames]
gi|47502409|gb|AAT31085.1| mutT/nudix family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49178762|gb|AAT54138.1| mutT/nudix family protein [Bacillus anthracis str. Sterne]
gi|164714101|gb|EDR19622.1| mutT/nudix family protein [Bacillus anthracis str. A0488]
gi|167513603|gb|EDR88972.1| mutT/nudix family protein [Bacillus anthracis str. A0193]
gi|170129031|gb|EDS97896.1| mutT/nudix family protein [Bacillus anthracis str. A0389]
gi|170669612|gb|EDT20354.1| mutT/nudix family protein [Bacillus anthracis str. A0465]
gi|172083425|gb|EDT68486.1| mutT/nudix family protein [Bacillus anthracis str. A0174]
gi|190562487|gb|EDV16454.1| mutT/nudix family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227003696|gb|ACP13439.1| mutT/nudix family protein [Bacillus anthracis str. CDC 684]
gi|228692379|gb|EEL46114.1| MutT/nudix [Bacillus cereus Rock3-42]
gi|228826455|gb|EEM72232.1| MutT/nudix [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228844903|gb|EEM89945.1| MutT/nudix [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229268566|gb|ACQ50203.1| MutT/NUDIX family protein [Bacillus anthracis str. A0248]
gi|300375689|gb|ADK04593.1| MutT/Nudix family protein [Bacillus cereus biovar anthracis str.
CI]
gi|384385587|gb|AFH83248.1| MutT/nudix family protein [Bacillus anthracis str. H9401]
gi|401186224|gb|EJQ93312.1| hypothetical protein IGW_02913 [Bacillus cereus ISP3191]
gi|401819920|gb|EJT19091.1| MutT/nudix family protein [Bacillus anthracis str. UR-1]
gi|403396320|gb|EJY93557.1| MutT/nudix family protein [Bacillus anthracis str. BF1]
Length = 202
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR G++H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL K+ SF V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKKEISSFTAISV 165
>gi|373487785|ref|ZP_09578451.1| Dipeptidyl-peptidase III [Holophaga foetida DSM 6591]
gi|372007559|gb|EHP08188.1| Dipeptidyl-peptidase III [Holophaga foetida DSM 6591]
Length = 695
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 35/355 (9%)
Query: 446 IAWIELDSELDVTIGPYETYED--AIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQ 503
+AW++ +D G +E Y+D A+ G +FEA + +R D + + N E
Sbjct: 307 VAWVQTKGAVDFLNGFHEVYKDPRAVVG---SFEANVSLRQD--SEPLDRLSQNAFYFEG 361
Query: 504 NLPMDNAYKSKDVIAAPIRV-IQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKN 562
+P +A+K V P+ + +Q I +GD A+NLPN K G+ V+L+N
Sbjct: 362 KMPWKDAWKRAKV-EPPVAISVQAIVETGDAGPISPAAYNLPNANDFRKLHGSKNVVLQN 420
Query: 563 VSEAKFKNILRPIADVCIRKEQQELV----DFDSFFTHNICHECCHGIGPHSITLPDGRQ 618
V A+ I + + E QEL+ D + + HG G +L
Sbjct: 421 VMLAESPEIRQKTLEAFYLPEDQELIRKHGDQARLWQVYLHEVIGHGSGQPDASLGSEDP 480
Query: 619 STVRLELQELHSAMEEAKADIVGLWALK----FLIGRDLLP--KSLVKSMYVSFLAGCFR 672
S ++L +++A+EE +A+ V L+ IG + + ++MY+ L R
Sbjct: 481 S---VKLGGVYNALEECRAEAVALYQAADPKLAEIGAATVADQPGMTQAMYLQLLTRQLR 537
Query: 673 ----SVRFGLEESHGKGQALQFNWLFEK----EAFILHSDDTFSV---DFDKVEGAVESL 721
+ L +H +G N+L + ++ D F V D K V +
Sbjct: 538 ANGEATDGVLRSAHRQGGQAILNYLIQPGKDFGTSVIQRDGHFYVQVSDAQKARIGVGEI 597
Query: 722 STEILTIQARGDKEAASLLLQKYCTMTQP--LKVALQKLENVQVPVDIAPTFTAV 774
++ T ++ GD+ A +++ + P K A ++ + P + A F A+
Sbjct: 598 LEKLQTFKSMGDRAGAEAFFEQFGSQVNPDWQKDAQARIAAIGRPRETAFVFPAL 652
>gi|423420033|ref|ZP_17397122.1| hypothetical protein IE3_03505 [Bacillus cereus BAG3X2-1]
gi|401101942|gb|EJQ09929.1| hypothetical protein IE3_03505 [Bacillus cereus BAG3X2-1]
Length = 202
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKDAPSIWDITSAGHIMHDEEV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + F +++ + EF +Y + P+P
Sbjct: 78 EIGGLREIEEELGLSFQTTDLAYKGIFKIDYELSN--LTDREFCHMYFHNVIKPLPFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKD 167
EV V + + LL +D
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKRD 156
>gi|224476054|ref|YP_002633660.1| hypothetical protein Sca_0561 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420661|emb|CAL27475.1| hypothetical protein with NUDIX hydrolase signature [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 175
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 27/159 (16%)
Query: 22 GITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
G T R G +H + IF + + L+ QR+ D K WPG+WD S+AG + G++
Sbjct: 17 GQTIERGNKLDEGTFHLVAHVCIFNQQGEMLIQQRKYD-KKLWPGLWDFSAAGAVMQGET 75
Query: 82 SLISAQRELQEELGINL------PKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLN 135
S I+AQRE++EEL ++ P+ + F F F DVYL+
Sbjct: 76 SNIAAQREIKEELDLDFDLTKMRPQLSMTFPFG----------------FDDVYLIQA-- 117
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ L +++ EV +++ EE L+ K+ F+ Y
Sbjct: 118 EVQLNDIHIEKDEVEDIRFAGREEILTLIEKE--KFINY 154
>gi|395242141|ref|ZP_10419140.1| Nucleoside diphosphate (Nudix) hydrolase [Lactobacillus pasteurii
CRBIP 24.76]
gi|394480502|emb|CCI85380.1| Nucleoside diphosphate (Nudix) hydrolase [Lactobacillus pasteurii
CRBIP 24.76]
Length = 175
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 31/194 (15%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ + QK + ++ D +R + S ++L+Q+R K +PGMW
Sbjct: 2 EILDLYDINRQKLPDQTMIRDQYQPKDTYRIACGVVIFNSQGQMLIQKRHQDKILFPGMW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINL------PKDAFEFVFTFLQQNVINDGKFIN 122
DIS+AG + +G+SS ++ +REL+EELG+++ PK F
Sbjct: 62 DISAAGSVISGESSQMAIERELKEELGLSVDFSNTRPKLTTHF----------------P 105
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQ 182
F D Y + + L+ TLQ+ EV+AVK+ + E ++ + F+PY +
Sbjct: 106 AGFCDFYTLEL--DVDLDELTLQKEEVTAVKWASLAEINQMIFAQE--FIPY-----FSD 156
Query: 183 LFNIISQRYKENTM 196
N+I+ K++ +
Sbjct: 157 FINLIAVMAKKHDL 170
>gi|206970911|ref|ZP_03231863.1| mutT/nudix family protein [Bacillus cereus AH1134]
gi|206734547|gb|EDZ51717.1| mutT/nudix family protein [Bacillus cereus AH1134]
Length = 202
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR GD+H T + W ++ +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGDWHETFHCWFVEKNDEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG++ + F I++ + EF +Y +N +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLVYKGIFKIDYEISN--LTDREFCHMYFHNVINQLPF 132
>gi|169829809|ref|YP_001699967.1| Nudix hydrolase [Lysinibacillus sphaericus C3-41]
gi|168994297|gb|ACA41837.1| Putative Nudix hydrolase [Lysinibacillus sphaericus C3-41]
Length = 207
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 16/151 (10%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++E + V ++ G T RSEVH G +H T + W+ E + Q R+ K +P
Sbjct: 1 MEQEIVKVFNERHEEIG-TATRSEVHEKGLWHETFHCWLVNEDY--IYFQVRSSQKKDYP 57
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+ DI++AGH+ A + ++ S RE++EELG+ + D + V + I I+NEF
Sbjct: 58 GLLDITAAGHLLAVE-TVESGIREVKEELGLQI--DVEDVVKMGMTSCSIVSENMIDNEF 114
Query: 126 ADVYLVTTLNPIPLE----AFTLQQTEVSAV 152
VY+ P E +FTLQ EVS V
Sbjct: 115 CHVYI------YPFEHDWNSFTLQYEEVSGV 139
>gi|228927057|ref|ZP_04090123.1| MutT/nudix [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228832792|gb|EEM78363.1| MutT/nudix [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 202
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R EVHR G++H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKD--AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
I RE++EELG++ A++ +FT + + N + EF +Y ++ +P
Sbjct: 78 QIGGLREIEEELGLSFQTTDLAYKGIFT-IDYEISN---LTDREFCHMYFHNVIDSLPFA 133
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
EV V + + LL ++ SF V
Sbjct: 134 P----GEEVDDVMKVHATSFLQLLKREISSFTAISV 165
>gi|344943122|ref|ZP_08782409.1| NUDIX hydrolase [Methylobacter tundripaludum SV96]
gi|344260409|gb|EGW20681.1| NUDIX hydrolase [Methylobacter tundripaludum SV96]
Length = 168
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T R +H G HR V+ +F E Q L LQ+R+ KD G+WD S+AGH+ AG+
Sbjct: 18 TCARHIIHATGLRHRAVHILVFNEQGQ-LFLQKRSMKKDLNGGLWDTSAAGHVDAGEDYD 76
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFT 143
ISA RE++EELGIN E +F I EF VY P F
Sbjct: 77 ISAVREIEEELGINAAH-MLEPLFKLPATAA------IGMEFIQVYRCIHNGP-----FN 124
Query: 144 LQQTEVSAVKYIAYEEYKNLLAKDD 168
L E+ + + E + DD
Sbjct: 125 LAPDEIDEGDWFSVAEIAGRIEADD 149
>gi|374301404|ref|YP_005053043.1| NUDIX hydrolase [Desulfovibrio africanus str. Walvis Bay]
gi|332554340|gb|EGJ51384.1| NUDIX hydrolase [Desulfovibrio africanus str. Walvis Bay]
Length = 187
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 13/119 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
P EVH+ HR+V ++ ++ LQ+R K +PG WDIS++GH+ AG+S +
Sbjct: 36 PLLEVHKQCLRHRSVMVLLY-NLQGKIFLQKRGQAKALYPGRWDISASGHVQAGESCEDA 94
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLN----PIPLE 140
A RELQEELGI L D+ + L+Q V G EF +Y +N P PLE
Sbjct: 95 ALRELQEELGIQL--DSLK-----LKQRV-GAGPNTGWEFVSLYSAGKINQHPAPAPLE 145
>gi|291556611|emb|CBL33728.1| Isopentenyldiphosphate isomerase [Eubacterium siraeum V10Sc8a]
Length = 173
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D TG+ KP E YH ++ IF S ++L+Q+R FK +P WDIS
Sbjct: 9 DERNFTGETIERGKPLPE----NRYHLVIHICIFG-SDGKMLIQQRQPFKKGFPDKWDIS 63
Query: 72 SAGHISAGDSSLISAQRELQEELGI--NLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 129
G AG++S +A REL EELGI + D F F DVY
Sbjct: 64 VGGSAVAGENSRQAASRELYEELGISHDFSHDRPMLTVHF------------ERGFDDVY 111
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQ 189
++ IP+ LQ EV A K+ +E +L+ D +F+PY LFN ++
Sbjct: 112 VIH--KDIPISELKLQPEEVQAAKWADRDEIYSLI--DSGAFIPY-YKSYIDMLFNYRTK 166
Query: 190 R 190
R
Sbjct: 167 R 167
>gi|164686200|ref|ZP_02210230.1| hypothetical protein CLOBAR_02638 [Clostridium bartlettii DSM
16795]
gi|164601802|gb|EDQ95267.1| hydrolase, NUDIX family [Clostridium bartlettii DSM 16795]
Length = 192
Score = 68.2 bits (165), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 14/139 (10%)
Query: 8 EEHLDV----LTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAEST--QELLLQRRADFK 61
EE LD+ L + GQ T R VHR G H+ VN W +S + + +Q+RA+FK
Sbjct: 2 EEILDIFNDKLEIIGQDT-----RKNVHRKGLLHQVVNCWAIEDSKDGRFVYMQQRAEFK 56
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFI 121
D +P ++DI+ GHI +G++ + RE++EE+G++L + ++ T Q + G F+
Sbjct: 57 D-FPLLFDITVGGHIDSGENIENAMIREIKEEIGLDLKIEDLKYEGT--QVRDTSSGDFL 113
Query: 122 NNEFADVYLVTTLNPIPLE 140
+ E ++ T+ PI +
Sbjct: 114 DKEICRIFTYTSDKPIKFD 132
>gi|392411935|ref|YP_006448542.1| isopentenyldiphosphate isomerase [Desulfomonile tiedjei DSM 6799]
gi|390625071|gb|AFM26278.1| isopentenyldiphosphate isomerase [Desulfomonile tiedjei DSM 6799]
Length = 187
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T R+E+HR+G HR+V+ +IF S EL +QRR+ KD P D S+AGH+ G++
Sbjct: 39 TATRAEIHRLGLIHRSVHIFIF-NSAGELYMQRRSPAKDRHPSKLDSSAAGHVDPGETYQ 97
Query: 84 ISAQRELQEELGINL 98
+A REL EELGI
Sbjct: 98 QTAARELGEELGITC 112
>gi|300771318|ref|ZP_07081194.1| isopentenyl-diphosphate delta-isomerase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761988|gb|EFK58808.1| isopentenyl-diphosphate delta-isomerase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 177
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
E+ L + ++TG T +SE HR+G HR + IF ++ ++LLQ+RAD K G+
Sbjct: 6 EQELITVNNNDEETG-TISKSEAHRLGILHRAFSVLIF-DTEGKMLLQKRADQKYHSGGL 63
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN-DGKFINNEFA 126
W + H ++++ +A R LQEELG N P +++ F Q N D I +E
Sbjct: 64 WTNACCSHPRPNETTIDAAHRRLQEELGFNCP---LTYLYKF--QYFANLDNDMIEHEMD 118
Query: 127 DVYLVT---TLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQL 183
+++ T+ P P EVS+ Y+ ++ + + ++ SF +
Sbjct: 119 HIFMGIYDGTITPDPY--------EVSSYTYLTLDDISSRIQQEPQSFTIW--------- 161
Query: 184 FNIISQRYKENTMERS 199
F II Q Y ++ +S
Sbjct: 162 FKIIFQHYMDHLNTKS 177
>gi|149369834|ref|ZP_01889685.1| putative dipeptidyl-peptidase III [unidentified eubacterium SCB49]
gi|149356325|gb|EDM44881.1| putative dipeptidyl-peptidase III [unidentified eubacterium SCB49]
Length = 676
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 188/488 (38%), Gaps = 74/488 (15%)
Query: 293 TTADSAVK--LLPDA-TKPVNGWKGLEYKASFPLPKPPGANFYPPDMDKMEFELWKSSLT 349
TT D+AV L DA +K VN K + + K NFY PD+ + E
Sbjct: 159 TTLDAAVVDVLFNDADSKKVNLSKDAD------IVKESAINFYGPDVTTADVE------- 205
Query: 350 EKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGSIYDLYSVPYSEEYNSYLTRA 409
F+ +K + ++ L+ +V V +Y + Y + + +
Sbjct: 206 --------KFYGAMKVDPKEPIELGLNTRLVKKDGKLVEEVYKSGGL-----YGAAIDKI 252
Query: 410 SELLHKAGDMASSPSLKRLLHSKADAFLS---NNYYDSDIAW-IELDSELDVTIGPYETY 465
L KA +A + L + + + + + D IAW + +D G E Y
Sbjct: 253 IGWLEKAQGVAENEKQAEALGLLIEYYRTGSLDTWDDYCIAWATSTEGNIDWINGFIEVY 312
Query: 466 EDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQ 525
D GYK ++E + I+D + ++ + Q E N P+ +K K+V + +
Sbjct: 313 NDPK-GYKGSYETVVQIKDFDMSKKMAVLSKEAQWFEDNSPLMPEHKKKEVKGVSYKTVI 371
Query: 526 LIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEA--------KFKNILRPIAD 577
+ +GD + NLPN+ I + G+ V L N+ A + +
Sbjct: 372 VAGEAGDASPSTPIGVNLPNNNWIRQAHGSKSVSLGNIINAYANAGGSGRLAEFAHDAEE 431
Query: 578 VCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKA 637
+ + +E +L D H HE +G S + +G T + L+ S +EE +A
Sbjct: 432 IALEEEYGQLAD----KLHTALHEV---VGHASGQINEG-VGTPKETLKRYKSTIEEGRA 483
Query: 638 DIVGLWALKFLIGRDLLPKSLV-------KSMYVSFLAGCFRS--VRFGL----EESHGK 684
D+ GL+ +L+ L LV K+ Y ++ S VR L EE+H
Sbjct: 484 DLFGLY---YLMDPKLQELGLVEDWEKTGKAAYDGYIRNGLISQLVRLELGDDVEEAHMV 540
Query: 685 GQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEGAVESLSTEILTIQARGDKEA 736
+ W +E+ E + + D+ K+ L E I + GD EA
Sbjct: 541 NRQWVSAWSYERGLKDGVIEKVTRDGKTYYDIKDYQKLRTIFGELLRETQRITSEGDYEA 600
Query: 737 ASLLLQKY 744
L++ Y
Sbjct: 601 GMSLVENY 608
>gi|89096817|ref|ZP_01169708.1| hypothetical protein B14911_17970 [Bacillus sp. NRRL B-14911]
gi|89088197|gb|EAR67307.1| hypothetical protein B14911_17970 [Bacillus sp. NRRL B-14911]
Length = 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWPG 66
E L + G + G T R +VHR G +H + W E + +Q R+ K +P
Sbjct: 4 ELLKIFDDEGNQIG-TATRKDVHRQGFWHEAFHCWFIQREEDKVYIYVQLRSKEKKDYPD 62
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+ DI++AGH+ A + ++ RE++EE+GI++ + + T + I FI+ E A
Sbjct: 63 LLDITAAGHLLA-EETVEDGVREIKEEIGIDVDIEELSPLGTI--RYCIEKENFIDKEMA 119
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
+V+L P + LQQ EV+ + I ++ +K L +D
Sbjct: 120 NVFLYECSQ--PFSEYELQQEEVAGIYRIEWDSFKKLWEGED 159
>gi|297172452|gb|ADI23425.1| NTP pyrophosphohydrolases including oxidative damage repair
enzymes [uncultured gamma proteobacterium HF0770_33G18]
Length = 176
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 8 EEHLDVLTMTGQKTGI--TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+E+ ++LT+ + + + R E+HR+G HR + +F + L LQRR KDS P
Sbjct: 5 QENSEILTVVDEHDRVIGARRRDEIHRLGLRHRATHVLVF-DLAGRLFLQRRGLHKDSNP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINL 98
G+WD S AGH+ G+S RE++EE+GI +
Sbjct: 64 GLWDSSVAGHVDDGESYDQCCMREIKEEIGIQV 96
>gi|159472180|ref|XP_001694229.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276892|gb|EDP02662.1| predicted protein [Chlamydomonas reinhardtii]
Length = 174
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 29/158 (18%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D T G G + RS H G +HR V A +F S ELL+QRR+ K PG W
Sbjct: 20 EVFDTYTEDGTPLG-RELRSVCHAKGIWHRAVYALLF-NSAGELLIQRRSPDKKVAPGQW 77
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S A H+S G+S R L+EELG+ L +D NEF +V
Sbjct: 78 DLSVAEHLSPGESYAEGVARGLEEELGVTLTQD---------------------NEFIEV 116
Query: 129 YLVTTLN-PIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165
Y + + PI AF Q EV+A ++++ + ++ +A
Sbjct: 117 YRLDGYDGPI---AFNHQ--EVTACRWVSLAQLRSDMA 149
>gi|325269755|ref|ZP_08136366.1| M49 family peptidase [Prevotella multiformis DSM 16608]
gi|324987956|gb|EGC19928.1| M49 family peptidase [Prevotella multiformis DSM 16608]
Length = 662
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 155/380 (40%), Gaps = 49/380 (12%)
Query: 402 YNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELDV 457
Y + + + L +A D A + +R++ + + + D D I W+ E + +D
Sbjct: 228 YGAAIRKIVCWLDRAKDFAENDQQRRVIGLLIRYYETGDLRDFDAYSIEWLREQEGHVDF 287
Query: 458 TIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVI 517
G E Y D + G K ++E + +D +AT + + N Q E + P++ ++ V
Sbjct: 288 INGFIEVYGDPM-GLKGSWEGIVEYKDVEATRRTQTISANAQWFEDHSPVNACFRKPKVK 346
Query: 518 AAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE----AKFKNILR 573
+ GD + NLPN + I + G+ V + N++ A N R
Sbjct: 347 GVTANAVCAAMLGGDEYPASAIGINLPNADWIRAEHGSKSVTISNLTHAYDMAARGNGFR 406
Query: 574 P--IADVCIRKEQQELVDFDSFFTHNICHECC-HGIGPHSITLPDGRQSTVRLELQELHS 630
+ D + + D + H HEC HG G LP T R L+ +
Sbjct: 407 EEFVIDAETLQWMNQFAD-QTDNLHTDLHECLGHGSGR---LLP----GTDRDALKNYGN 458
Query: 631 AMEEAKADIVGLWALKFLIGRDLLPKSLV------KSMYVSFLAGCF--RSVRFG----L 678
+EEA+AD+ GL+ ++ R LL L+ K+ Y +++ + VR +
Sbjct: 459 TIEEARADLFGLY---YIADRKLLELGLLDSPDAYKAQYYAYMMNGLLTQQVRINPGKQI 515
Query: 679 EESHGKGQALQFNW-------------LFEKEAFILHSDDTFSV-DFDKVEGAVESLSTE 724
EE+H + +AL W + KEA + D++ + E
Sbjct: 516 EEAHMQNRALIARWAVSLGKESNVVELVTRKEAGTCGRKTFVRINDYEALRRIFAYELAE 575
Query: 725 ILTIQARGDKEAASLLLQKY 744
I I++ GD +AA L++ Y
Sbjct: 576 IQRIKSEGDFDAARKLVETY 595
>gi|423487120|ref|ZP_17463802.1| hypothetical protein IEU_01743 [Bacillus cereus BtB2-4]
gi|423492844|ref|ZP_17469488.1| hypothetical protein IEW_01742 [Bacillus cereus CER057]
gi|423500364|ref|ZP_17476981.1| hypothetical protein IEY_03591 [Bacillus cereus CER074]
gi|401155368|gb|EJQ62779.1| hypothetical protein IEY_03591 [Bacillus cereus CER074]
gi|401156328|gb|EJQ63735.1| hypothetical protein IEW_01742 [Bacillus cereus CER057]
gi|402438997|gb|EJV71006.1| hypothetical protein IEU_01743 [Bacillus cereus BtB2-4]
Length = 202
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
I RE++EELG+ + + I++ + EF +Y + P+P
Sbjct: 78 QIGGLREIEEELGLFFQTTDLTYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLPF 132
>gi|386827073|ref|ZP_10114180.1| isopentenyldiphosphate isomerase [Beggiatoa alba B18LD]
gi|386427957|gb|EIJ41785.1| isopentenyldiphosphate isomerase [Beggiatoa alba B18LD]
Length = 170
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 4 SVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDS 63
S+ E+LDV+ T ++ RSE+H +G HR+V+ +F E+ L +R K S
Sbjct: 5 SLPNAEYLDVVD-TNDMVIESRLRSEIHHLGLRHRSVHILVF-NPQGEIFLHKRNAQKKS 62
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
+P WD S+AGH++ G+S +A+REL EEL IN P A +F +
Sbjct: 63 FPLHWDSSAAGHVATGESYAQAAERELLEELQINAPLQA---LFQ------LEASPRTTQ 113
Query: 124 EFADVY-LVTTLNPIP 138
EF VY VTT P P
Sbjct: 114 EFCWVYRCVTTETPKP 129
>gi|227540538|ref|ZP_03970587.1| isopentenyl-diphosphate delta-isomerase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239620|gb|EEI89635.1| isopentenyl-diphosphate delta-isomerase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 177
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
E+ L + +KTG T +SE HR+G HR + IF ++ ++LLQ+RAD K G+
Sbjct: 6 EQELITVNDNDEKTGTTS-KSEAHRLGILHRAFSVLIF-DTEGKMLLQKRADQKYHSGGL 63
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + H ++++ +A R LQEE+G + P ++ + F + N+ ND I +E
Sbjct: 64 WTNACCSHPRPDETTIEAAHRRLQEEMGFDCPL-SYIYKFKYF-ANLDND--MIEHEMDH 119
Query: 128 VYLVT-TLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNI 186
+++ T + N IP EVS+ Y+ ++ + + ++ SF + F I
Sbjct: 120 IFVGTYSGNIIP------DPDEVSSFTYLTLDDISSRIQQEPQSFTIW---------FKI 164
Query: 187 ISQRYKENTMERS 199
I Q Y ++ +S
Sbjct: 165 IFQHYMDHLNTKS 177
>gi|357042961|ref|ZP_09104661.1| hypothetical protein HMPREF9138_01133 [Prevotella histicola F0411]
gi|355368885|gb|EHG16297.1| hypothetical protein HMPREF9138_01133 [Prevotella histicola F0411]
Length = 664
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 155/371 (41%), Gaps = 54/371 (14%)
Query: 446 IAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQN 504
I W+ E D +D G E Y D + G K ++E + +D KAT + + N Q E +
Sbjct: 276 IEWLHEQDGMIDFINGFIEVYGDPM-GLKGSWEGIVEYKDLKATHRTQTISANAQWFEDH 334
Query: 505 LPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVS 564
P++ A++ V VI GD + NLPN + I + G+ V + N++
Sbjct: 335 SPVNPAFRKPKVKGVTANVICAAMLGGDEYPASAIGINLPNADWIRAEHGSKSVTISNLT 394
Query: 565 E----AKFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIG---PHSITL 613
A N R + I + ++++ S T H HEC HG G P T
Sbjct: 395 HAYDMAAKGNGFRE--EFVIDEATLQMMNLYSDKTDDLHTDLHECLGHGSGRLLPG--TD 450
Query: 614 PDGRQSTVRLELQELHSAMEEAKADIVGLWAL---KFLIGRDLLPKSLVKSMYVSFLAGC 670
PD L+ + +EEA+AD+ GL+ + K L L K+ Y ++
Sbjct: 451 PDA--------LKNYGNTIEEARADLFGLYYIADEKLLDLGLLDSSEAYKAQYYGYMMNG 502
Query: 671 F--RSVRF----GLEESHGKGQALQFNWLF-----EKEAFILHSDDTFSV---------D 710
+ VR +EE+H + +AL W + A ++ D S D
Sbjct: 503 LLTQQVRIKPGKNIEEAHMQNRALIAWWAMDLGSKDNVAELIKQKDAQSGEVKTFVRIND 562
Query: 711 FDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCT-MTQPLKV-ALQKLENVQVPVDIA 768
+ K+ EI I++ GD EAA L++ Y + + L LQ+ E ++ IA
Sbjct: 563 YAKLRDIFAQELAEIQRIKSEGDFEAARKLVETYAVKLDKALHAEVLQRYERLK----IA 618
Query: 769 PTFTAVNKLLQ 779
P +N +L+
Sbjct: 619 PYKGFINPVLK 629
>gi|449019702|dbj|BAM83104.1| probable isopentenyl diphosphate isomerase [Cyanidioschyzon merolae
strain 10D]
Length = 218
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 9 EHLDVLTM---TGQKTGITKPRSEVHRVGDYHRTVNAWI-------------FAESTQEL 52
E LDVL TG + R VHR G HR+V+ + + +L
Sbjct: 13 ELLDVLDPGDPTGSRVIARYDRLRVHREGLLHRSVHVCVVRSVPDWPAQVHGLRNTNYKL 72
Query: 53 LLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINL-------PKDAFEF 105
LLQRR++ K PG WD+S A H+ AG+S +A R LQEELG+ L P A +
Sbjct: 73 LLQRRSESKAIAPGCWDLSCAEHLRAGESFEGAAVRGLQEELGLALAPDQQTTPIHALDD 132
Query: 106 VFTFLQQNVINDGKFINNEFADVYLVTTLNPI--PLEAFTLQQTEVSAVKYIAYEEYKNL 163
LQ + E+ +Y+V + L L EV+ V++I E +
Sbjct: 133 GEPALQLYDYPSVGLTDYEWNRIYVVFVTDQADEALAKLKLDSAEVAQVRWITRESLQME 192
Query: 164 LAKDDPSFVPY 174
LA++ F P+
Sbjct: 193 LAENPSHFTPW 203
>gi|50365288|ref|YP_053713.1| nucleoside diphosphate (nudix) hydrolase [Mesoplasma florum L1]
gi|50363844|gb|AAT75829.1| nucleoside diphosphate (nudix) hydrolase [Mesoplasma florum L1]
Length = 174
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ + G KT T R G Y R + IF + +E+L+Q+ + + W GMW
Sbjct: 2 EILDLYDILGNKTDQTMIRGTKPPKGFYRRKITIGIF-NNKEEMLIQKVSKERKYWTGMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S +G +S G++S +A RE +EELG+ + FT IN F D
Sbjct: 61 TPSVSGSVSTGENSQSTATREAKEELGLEIDFSNIRPSFT------IN----FTEGFDDF 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
YL+ + +E LQ+ EV VK+ +E +++ + F+P+
Sbjct: 111 YLIK--KEVEIEKLILQKEEVEEVKWATKQEIIDMIKTGE--FLPF 152
>gi|296123353|ref|YP_003631131.1| NUDIX hydrolase [Planctomyces limnophilus DSM 3776]
gi|296015693|gb|ADG68932.1| NUDIX hydrolase [Planctomyces limnophilus DSM 3776]
Length = 178
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE DV+ + + PRS VH +HR V+ +F S ELL+ +R+ KD P
Sbjct: 8 EELFDVVNEADEVIDVL-PRSVVHARKLWHRAVHVLVF-NSAGELLIHQRSAQKDEEPLT 65
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLP 99
W+ S +GH+SAG+ ++A+RELQEELG++ P
Sbjct: 66 WNSSCSGHVSAGEDYDLAARRELQEELGLDTP 97
>gi|212697179|ref|ZP_03305307.1| hypothetical protein ANHYDRO_01745 [Anaerococcus hydrogenalis DSM
7454]
gi|212675954|gb|EEB35561.1| hypothetical protein ANHYDRO_01745 [Anaerococcus hydrogenalis DSM
7454]
Length = 129
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
MA+ + +E++D+ KTG R ++ G + ++ IF + LL+Q+R
Sbjct: 1 MAKEKIMKEYVDLYDNFRNKTGKVIERRDIVPKGLFRLIIHVLIF-DKKGRLLIQKRTKS 59
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96
K SWP WD++ +G +S+G++S ISA REL EELGI
Sbjct: 60 KRSWPDKWDLTVSGAVSSGETSQISASRELFEELGI 95
>gi|403234209|ref|ZP_10912795.1| hypothetical protein B1040_00280 [Bacillus sp. 10403023]
Length = 208
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 26 PRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
RS+VHR+G +H + W + + + LQ R+ K +P + DI++AGH+ A D ++
Sbjct: 21 SRSDVHRIGYWHEVFHCWFISNEQGIDYIYLQIRSKNKKDYPNLLDITAAGHLLA-DETV 79
Query: 84 ISAQRELQEELGINLPKDAF-EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
RE++EE+GI++ AF E + + + ++ E A+V+L T N + F
Sbjct: 80 EDGVREIKEEIGIDV---AFNELIKLGVLNYCVVQKDLVDKELANVFLYKTEN--TFDDF 134
Query: 143 TLQQTEVSAVKYIAYEEYKNL 163
TLQ EVS + + ++ L
Sbjct: 135 TLQVEEVSGIVKAKFTDFSKL 155
>gi|126650476|ref|ZP_01722699.1| hypothetical protein BB14905_07798 [Bacillus sp. B14905]
gi|126592632|gb|EAZ86631.1| hypothetical protein BB14905_07798 [Bacillus sp. B14905]
Length = 207
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++E + V ++ G T RSEVH G +H T + W+ E + Q R+ K +P
Sbjct: 1 MEQEIVKVFNEQHEEIG-TATRSEVHEKGLWHETFHCWLVNEDY--IYFQVRSSQKKDYP 57
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+ DI++AGH+ A + ++ S RE++EELG+ + D + V + I I+NEF
Sbjct: 58 GLLDITAAGHLLAVE-TVESGIREVKEELGLQI--DVQDVVKMGMTSCSIVSENMIDNEF 114
Query: 126 ADVYLVTTLNPIPLE----AFTLQQTEVSAV 152
VY+ P E +F LQ EVS V
Sbjct: 115 CHVYI------YPFEHDWNSFALQYEEVSGV 139
>gi|403667303|ref|ZP_10932616.1| hypothetical protein KJC8E_00964 [Kurthia sp. JC8E]
Length = 200
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 27 RSEVHRVGDYHRTVNAWI--FAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
R+ H G +H T + W+ + +LLQ R+ K + ++DI++AGH+ A + +++
Sbjct: 19 RAVAHEKGYWHETFHCWLTSIVDGEAVVLLQLRSSEKKDYASLYDITAAGHLMAHE-TIL 77
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE-AFT 143
RE++EELG+ L +A+E + TF NVI + E+A + +P E AFT
Sbjct: 78 DGLREVEEELGLFLRIEAYESMGTF--PNVILSDTIQDREWARCFTAA----VPRETAFT 131
Query: 144 LQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
LQ EV + Y ++ L+ PS ++
Sbjct: 132 LQIEEVEKIVYCRISDFYQLIEGICPSITIWN 163
>gi|359410936|ref|ZP_09203401.1| NUDIX hydrolase [Clostridium sp. DL-VIII]
gi|357169820|gb|EHI97994.1| NUDIX hydrolase [Clostridium sp. DL-VIII]
Length = 171
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ TG R D+H V+ IF S E+++Q+R +K+ WP MW
Sbjct: 2 ELWDIYDKNRNLTGRKIKRGSEFGKDDFHLVVHVCIF-NSRNEMIIQQRQPWKEGWPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G AG++S+ +A+RE EE+G + + FT + +D FI E
Sbjct: 61 DITVGGSAWAGETSVQAAERETLEEIGYKIDLSSERPFFTINFEAGFDDYYFIERE---- 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNG 178
I ++ LQ EV +VK+ + +E L+ + F+ Y G
Sbjct: 117 --------INIKELKLQYEEVQSVKWASKDEILQLVK--EGKFIDYWFTG 156
>gi|229059665|ref|ZP_04197043.1| MutT/nudix [Bacillus cereus AH603]
gi|228719678|gb|EEL71277.1| MutT/nudix [Bacillus cereus AH603]
Length = 202
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 25 KPRSEVHRVGDYHRTVNAWIFAESTQELLL--QRRADFKDSWPGMWDISSAGHISAGDSS 82
K R +VHR GD+H T + W + +++ L Q R+ K P +WDI+SAGHI +
Sbjct: 18 KLRDDVHRDGDWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPNIWDITSAGHIMHDEDV 77
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
I RE++EELG++ + + I++ + EF +Y + P+
Sbjct: 78 QIGGLREIEEELGLSFQTTDLTYKGIYKIDYEISN--LTDREFCHMYFHNVIKPLSFAP- 134
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
EV V + + LL ++ SF
Sbjct: 135 ---GEEVDDVMKVHATSFLQLLKREISSFT 161
>gi|304395785|ref|ZP_07377668.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. aB]
gi|304357079|gb|EFM21443.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. aB]
Length = 180
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V +IF S QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYIF-NSRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ + FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTRDAAERRLREEMGMTVALTPVFELSYNLKLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 115 GHVFFAICDSLPQLNPQEADAF 136
>gi|385872462|gb|AFI90982.1| Isopentenyl-diphosphate delta-isomerase [Pectobacterium sp.
SCC3193]
Length = 179
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
+ TG+ + + E H G HR + +IF S Q+LLLQ+RA+ K G+W + H +
Sbjct: 14 KPTGVME-KQEAHVKGALHRAITVYIF-NSRQQLLLQQRAEAKYHSGGLWSNTCCSHPAP 71
Query: 79 GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT----- 133
G+ +L +A R L EE+G+ + A +FT + +++G I +E VY T
Sbjct: 72 GEETLQAAHRRLYEEMGL---RCALTPMFTLTYRLPLDNG-LIEHELGHVYFGVTDDAPQ 127
Query: 134 LNPIPLEAFTLQQTEVSAVKYIAYEE 159
+NP + ++ Q + A + +A E
Sbjct: 128 INPDEVSSYEYQSIDAIAGRMMATPE 153
>gi|196228205|ref|ZP_03127072.1| dimethyladenosine transferase [Chthoniobacter flavus Ellin428]
gi|196227608|gb|EDY22111.1| dimethyladenosine transferase [Chthoniobacter flavus Ellin428]
Length = 460
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
V E DV+ + TG R EVHR HR V+ +F S EL LQRR+ +KD P
Sbjct: 295 VHGEIFDVVDEEDRVTGQLS-RHEVHRQKLLHRAVHILVF-NSRGELFLQRRSRWKDVHP 352
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGIN 97
WD S+AGH+++GD+ +A RE+ EELG++
Sbjct: 353 LRWDSSAAGHVNSGDTYAGTAPREIVEELGVS 384
>gi|339010578|ref|ZP_08643148.1| hypothetical protein BRLA_c44140 [Brevibacillus laterosporus LMG
15441]
gi|338772733|gb|EGP32266.1| hypothetical protein BRLA_c44140 [Brevibacillus laterosporus LMG
15441]
Length = 211
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAE--STQELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
+ R+EVHR G +H T + W + T + Q R++ K +P + DI++AGH+ A +
Sbjct: 19 SASRAEVHRKGLWHETFHCWFISNENGTDYIHFQIRSEQKKDFPSLLDITAAGHLLAHE- 77
Query: 82 SLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
++ RE++EELGI + + V + + +N I FI+ E + V+L + + I
Sbjct: 78 TIYDGIREIEEELGIRVS--FHDLVSSGVIKNCIIQKGFIDRELSHVFLYQSKHAIS--D 133
Query: 142 FTLQQTEVSAV 152
+TLQ EVS +
Sbjct: 134 YTLQPEEVSGI 144
>gi|167749294|ref|ZP_02421421.1| hypothetical protein EUBSIR_00245 [Eubacterium siraeum DSM 15702]
gi|167657739|gb|EDS01869.1| hydrolase, NUDIX family [Eubacterium siraeum DSM 15702]
Length = 173
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D TG+ KP E YH ++ I S ++L+Q+R FK +P WDIS
Sbjct: 9 DERNFTGETIERGKPLPESR----YHLVIHICILG-SDGKMLIQQRQPFKKGFPDKWDIS 63
Query: 72 SAGHISAGDSSLISAQRELQEELGI--NLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 129
G AG++S +A REL EELGI + D F F DVY
Sbjct: 64 VGGSAVAGENSRQAASRELYEELGIRHDFSHDRPMLTVHF------------ERGFDDVY 111
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
++ IP+ LQ EV A K+ +E +L+ D +F+PY
Sbjct: 112 VIH--KDIPISELKLQPEEVQAAKWADRDEIYSLI--DSGAFIPY 152
>gi|297171878|gb|ADI22866.1| NTP pyrophosphohydrolases including oxidative damage repair
enzymes [uncultured gamma proteobacterium HF0500_32L01]
Length = 176
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 8 EEHLDVLTMTGQKTGI--TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+E+ ++LT+ + + + R E+HR+G HR + +F + L LQRR KDS P
Sbjct: 5 QENSEILTVVDEHDRVIGARRRDEIHRLGLRHRASHVLVF-DLAGRLFLQRRGLHKDSNP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINL 98
G+WD S AGH+ G+S RE++EE+GI +
Sbjct: 64 GLWDSSVAGHVDDGESYDQCCIREIKEEIGITV 96
>gi|317131171|ref|YP_004090485.1| NUDIX hydrolase [Ethanoligenens harbinense YUAN-3]
gi|315469150|gb|ADU25754.1| NUDIX hydrolase [Ethanoligenens harbinense YUAN-3]
Length = 173
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E +D+ TG+ TG PR + G++ V+ +I+ + + LLQ+R+ K +PG W
Sbjct: 2 EWMDLRDGTGRPTGRLVPREHALQNGEFMLAVHVFIYRDDGR-FLLQKRSLRKRLYPGKW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G + AG+SSL +A RE++EE+G+ LP + + + F DV
Sbjct: 61 DITGGG-VRAGESSLEAACREVEEEVGLTLPPRRMQKLARLKRPPC----------FFDV 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
+ + ++ LQ EV AV+ + +E +L +++
Sbjct: 110 W--ACRHAFEMDELVLQAEEVDAVRLVTPQEMLTVLFEEE 147
>gi|261822165|ref|YP_003260271.1| isopentenyl-diphosphate delta-isomerase [Pectobacterium wasabiae
WPP163]
gi|261606178|gb|ACX88664.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pectobacterium
wasabiae WPP163]
Length = 179
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
+ TG+ + + E H G HR + +IF S Q+LLLQ+RA+ K G+W + H +
Sbjct: 14 KPTGVME-KQEAHVKGALHRAITVYIF-NSRQQLLLQQRAEAKYHSGGLWSNTCCSHPAP 71
Query: 79 GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT----- 133
G+ +L +A R L EE+G+ + A +FT + +++G I +E VY T
Sbjct: 72 GEETLQAAHRRLYEEMGL---RCALTPMFTLTYRLPLDNG-LIEHELGHVYFGVTDDAPQ 127
Query: 134 LNPIPLEAFTLQQTEVSAVKYIAYEE 159
+NP + ++ Q + A + +A E
Sbjct: 128 INPDEVSSYEYQSIDAIAGRMMATPE 153
>gi|182414192|ref|YP_001819258.1| NUDIX hydrolase [Opitutus terrae PB90-1]
gi|177841406|gb|ACB75658.1| NUDIX hydrolase [Opitutus terrae PB90-1]
Length = 197
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E DV+ + G + RSEVH G HR V+ +F + + + +Q+R+ KD PG+
Sbjct: 3 DEFFDVVNERDEPVGRAR-RSEVHAKGWRHRAVHVLVFDQHGR-VFVQKRSMKKDCSPGL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINL---PKDAF 103
WD S +GH+ AG+ +A REL+EELG+ + PK F
Sbjct: 61 WDSSCSGHLDAGEDYDAAAVRELEEELGMKVSAPPKRWF 99
>gi|407795918|ref|ZP_11142875.1| hydrolase [Salimicrobium sp. MJ3]
gi|407019738|gb|EKE32453.1| hydrolase [Salimicrobium sp. MJ3]
Length = 192
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 27 RSEVHRVGDYHRTVNAWI--FAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
R + H G++H + W+ + + +Q R+ K +PG++DI++AGH+ A + S+
Sbjct: 19 REKAHASGEWHEVFHCWLLSYCGGDSYVYVQWRSPSKKDYPGLYDITAAGHLEA-EESVS 77
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
RE++EE+G+++P + E + V++ I+ EFA ++ + L F+L
Sbjct: 78 DGVREVKEEIGLDIPYENLEKI------AVLDTWIGIDREFAHEHVYVCSH--SLSQFSL 129
Query: 145 QQTEVSAVKYIAYEEYKNLL 164
Q+ EV + I +E++K L
Sbjct: 130 QKEEVEEMDRIRWEDFKALF 149
>gi|406905128|gb|EKD46683.1| Isopentenyldiphosphate isomerase [uncultured bacterium]
Length = 181
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDS 63
+ EE+LD++ G TG + RS H G H+TV+ + F + ELL+ R+ K S
Sbjct: 1 MSEEYLDIVDENGNLTGEKELRSVCHEKGLRHQTVHIYFFRKVQDDFELLVHLRSKDKSS 60
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFIN 122
P WD GH+ G +A+RE++EE G++L KD F DG N
Sbjct: 61 HPNRWDTRFGGHVETGQMMDEAAEREIKEETGLDLKIKD---MTIGFFGTYQSKDGG--N 115
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNG 178
E Y N L+ + EV VK+++++E + ++ P VNG
Sbjct: 116 KEVTQTYYY-NFND-DLDTLSFNDGEVQDVKWMSFDEIERSMSA-SPDIWSGSVNG 168
>gi|95930259|ref|ZP_01312997.1| NUDIX hydrolase [Desulfuromonas acetoxidans DSM 684]
gi|95133722|gb|EAT15383.1| NUDIX hydrolase [Desulfuromonas acetoxidans DSM 684]
Length = 172
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
Q + +++ Q G+ +PR+E H D HR + +F S+ +LLLQ+R++ KD P
Sbjct: 4 QVDFFEIVDSDDQVIGL-RPRNECHGNPDLVHRVSHVLVF-NSSGDLLLQKRSELKDVQP 61
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGIN 97
G WD S GH+ G++ L +A RE+ EELGI+
Sbjct: 62 GKWDTSVGGHVDPGENYLQAAYREMNEELGIH 93
>gi|407476837|ref|YP_006790714.1| nudix hydrolase [Exiguobacterium antarcticum B7]
gi|407060916|gb|AFS70106.1| Nudix hydrolase [Exiguobacterium antarcticum B7]
Length = 197
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+ E L V+ ++G+ R VH G +H T + ++ +LLQ+RA K +P
Sbjct: 3 ESEQLMVVDVSGRPL-YRATRQTVHTKGLWHETFHCFVVDLEKGYVLLQQRAKQKKDFPE 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+ DI++AGH+ AG++ REL+EE+G+ + + FL++ + D ++ E
Sbjct: 62 LLDITAAGHLLAGETP-AEGVRELEEEIGLVRAFEDLYPIGVFLEELIFPD--LLDRE-- 116
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
V+L T + PL + LQ TEVS + ++ E+ L
Sbjct: 117 RVHLFITDSSEPLHRYVLQSTEVSRLVAFSFSEFARL 153
>gi|407978187|ref|ZP_11159020.1| hydrolase [Bacillus sp. HYC-10]
gi|407415194|gb|EKF36801.1| hydrolase [Bacillus sp. HYC-10]
Length = 208
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDS 63
+++E L+++ + G T RS+VH G +H T + W+ + T L Q R+ K
Sbjct: 1 MEQEELNIMNDRHETIG-TAARSDVHAQGLWHETFHFWLLKKEDDTVFLYFQLRSPEKKD 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
+P + DI++AGH+ A + RE++EELG+++P E +T + Q+ I+ FI+
Sbjct: 60 FPSLLDITAAGHLLAAEQP-PDGMREVEEELGLSIPFK--EVTYTGIIQDEIHLPSFIDR 116
Query: 124 EFADVYL 130
EF VYL
Sbjct: 117 EFCHVYL 123
>gi|294055742|ref|YP_003549400.1| NUDIX hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293615075|gb|ADE55230.1| NUDIX hydrolase [Coraliomargarita akajimensis DSM 45221]
Length = 187
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
V EE DV+ + + RS VHR HR ++ ++F Q + LQRR+ KDS P
Sbjct: 16 VSEELFDVVDAEDNVLRV-ETRSTVHRERLMHRAIHVFVFNAEGQ-IYLQRRSMNKDSAP 73
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF--INN 123
G W S +GH+ +G+ ++A REL+EE+G+ P Q ++ +
Sbjct: 74 GKWVSSCSGHVDSGEEYDVAAIRELEEEIGLKDPAQM---------QRILKESPCPQTGQ 124
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP 169
EF +Y + P FTL EVS ++++ +E N A + P
Sbjct: 125 EFVWLYTCQSEGP-----FTLDPEEVSEGRWVSIDEL-NQWADERP 164
>gi|21328655|gb|AAM48661.1| isopentyl-diphosphate delta-isomerase [uncultured marine
proteobacterium]
Length = 172
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Query: 31 HRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQREL 90
H++G HR V+ ++ AE +L+Q+RA K PGMW S H + LI A+R L
Sbjct: 22 HQLGLKHRAVSIFVMAED--HILIQQRALSKYHTPGMWANSCCTHPHWAEDPLICARRRL 79
Query: 91 QEELGIN----LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQ 146
EELG+ P+ E+ + + +G I +E VY+ T + + L
Sbjct: 80 DEELGMTGLDLAPRGEVEY------RAEVGNG-LIEHEVVQVYVAQTSFSV---SMALNP 129
Query: 147 TEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+EV AVK++ ++ + L + SF P+
Sbjct: 130 SEVQAVKWVTRQDLRQELDRTPTSFTPW 157
>gi|302672064|ref|YP_003832024.1| NUDIX hydrolase [Butyrivibrio proteoclasticus B316]
gi|302396537|gb|ADL35442.1| NUDIX domain-containing protein [Butyrivibrio proteoclasticus B316]
Length = 175
Score = 65.9 bits (159), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHR-------TVNAWIFAESTQELLLQRRADFK 61
E++D+ T GQ TG+++P+ + G+Y+R T ++ + + ++Q+R+
Sbjct: 2 EYIDIFTRDGQFTGVSRPKHDPKTTGEYYRHVLIIMKTTDSPAPGKGEGQYIVQQRSLKA 61
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFI 121
+PG WD+ + G + AG++ +A RE +EEL I +P D +F F + +DG
Sbjct: 62 RFYPGKWDM-TGGAVMAGETPEAAAIRETKEELDITIPADELKFGFEHIVD--WDDG--- 115
Query: 122 NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
V++ +P E F EV+ VK + + E+
Sbjct: 116 TGAIVTVFMCRV--DVPEEGFKYDTHEVNDVKIMPFGEF 152
>gi|440759109|ref|ZP_20938262.1| Isopentenyl-diphosphate delta-isomerase [Pantoea agglomerans 299R]
gi|436427125|gb|ELP24809.1| Isopentenyl-diphosphate delta-isomerase [Pantoea agglomerans 299R]
Length = 180
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F S QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NSRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ + FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTRDAAERRLREEMGMTVALTPVFELSYNLKLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 115 GHVFFAICDSLPQLNPQEADAF 136
>gi|421876199|ref|ZP_16307758.1| NTP pyrophosphohydrolase including oxidative damage repair enzymes
[Leuconostoc citreum LBAE C10]
gi|372557950|emb|CCF23878.1| NTP pyrophosphohydrolase including oxidative damage repair enzymes
[Leuconostoc citreum LBAE C10]
Length = 173
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E DV T QKTG + R E VG+YH N IF + Q +LLQ+R+ K S PG+
Sbjct: 10 DELWDVYTADKQKTGRSHRRGEQLNVGEYHLVTNGIIFNLAGQ-VLLQQRSFHKMSRPGL 68
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W G G++S + REL EE+ I +P F+ T + I D
Sbjct: 69 WTAEIGGSALVGETSQQALVRELSEEMNICVPAHQLRFLLTRRLSSWIED---------- 118
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
+ ++ +P+ LQ EV A +++
Sbjct: 119 -WYAIKIDSVPM-PIRLQAAEVIAADWLS 145
>gi|157691324|ref|YP_001485786.1| hydrolase [Bacillus pumilus SAFR-032]
gi|157680082|gb|ABV61226.1| possible hydrolase [Bacillus pumilus SAFR-032]
Length = 208
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 8/149 (5%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAES--TQELLLQRRADFKDS 63
+++E L++L + G+ RS++H G +H T + W+ + L Q R+ K
Sbjct: 1 MEQEKLNILNEQHETIGVA-ARSDIHAHGLWHETFHFWLLKKEHDIMYLYFQLRSPVKKD 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
+P ++DI++AGH+ A + RE++EELG+ +P + + F + Q+ I+ F +
Sbjct: 60 FPFLFDITAAGHLLANEQPF-DGVREVEEELGLTVPFE--DLAFAGVIQDEIHLPNFTDR 116
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
EF VYL ++P LQ+ EV+ +
Sbjct: 117 EFCHVYLY--VHPEEQMNIQLQKEEVAGL 143
>gi|337288530|ref|YP_004628002.1| NUDIX hydrolase [Thermodesulfobacterium sp. OPB45]
gi|334902268|gb|AEH23074.1| NUDIX hydrolase [Thermodesulfobacterium geofontis OPF15]
Length = 191
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R +H+ G +H+ V+ ++F E E+ LQ+++ D PG+W S++GH+ AG+ +LISA
Sbjct: 39 RESIHKKGLFHKIVHVFLFNEKG-EIYLQKKSPLVDENPGLWTSSASGHVLAGEGALISA 97
Query: 87 QRELQEE 93
QREL+EE
Sbjct: 98 QRELREE 104
>gi|282882307|ref|ZP_06290938.1| nudix hydrolase 3 [Peptoniphilus lacrimalis 315-B]
gi|281297857|gb|EFA90322.1| nudix hydrolase 3 [Peptoniphilus lacrimalis 315-B]
Length = 167
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQ 91
R G YH WI+ S ++ ++QRR+ K S+PGMW S+ G +G++S +RE
Sbjct: 25 RKGQYHLISEGWIY-RSDKKFIIQRRSLEKSSFPGMWYCSAGGSCISGETSKEGMKREFF 83
Query: 92 EELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSA 151
EELGI++P + + ++ FI + ++LV I LE TLQ+ EV
Sbjct: 84 EELGIDIPIEEIRL------KRIVTGKNFIFH----IFLVR--KDIDLEDLTLQKEEVMD 131
Query: 152 VKYIAYEEYKNLLAK 166
V EE ++ K
Sbjct: 132 VALATEEEIFQMIDK 146
>gi|225620521|ref|YP_002721778.1| nudix hydrolase [Brachyspira hyodysenteriae WA1]
gi|225215340|gb|ACN84074.1| nudix hydrolase [Brachyspira hyodysenteriae WA1]
Length = 168
Score = 65.1 bits (157), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ + KTG R DYH ++AW+ S E+++ +R K P MW
Sbjct: 3 EIWDIYDINKNKTGRFHQRGIPLNKNDYHIVIHAWV-VNSNDEVIITKRHKSKKICPDMW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G I AG+ S+ A REL+EE+G++ KD F+ +F+ +N D
Sbjct: 62 ECTE-GSILAGEDSIDGALRELKEEIGLSFKKDEAVFLTSFVLD--------FSNTIVDS 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
Y+ + +E LQ+ EVS + E+Y + D
Sbjct: 113 YMFR--RNVNIEDLVLQENEVSDAMIVNREKYLEMCKSGD 150
>gi|187934775|ref|YP_001885861.1| nudix-family protein [Clostridium botulinum B str. Eklund 17B]
gi|187722928|gb|ACD24149.1| nudix-family protein [Clostridium botulinum B str. Eklund 17B]
Length = 169
Score = 65.1 bits (157), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E LD+ G+KTG+ K R + + G+++ + W+ S+ E+L+Q+RA + P +
Sbjct: 3 DELLDIYDKNGKKTGVIKKRGDRLQEGEFNFAIELWVI-NSSNEILIQKRAACRKVLPNI 61
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W +++ G+I +G+ + RE +EE+ + + K+ + N + D
Sbjct: 62 WGMTT-GYIKSGEDTQSGCIREAKEEIDLEILKEDLNLICNLTHGNTM----------WD 110
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
V+ V + LQ+ EVS +++++ E+K ++
Sbjct: 111 VFAVK--KSYDISRAILQKEEVSEIRWVSINEFKEMI 145
>gi|294953499|ref|XP_002787794.1| nucleoside diphospahte hydrolase, putative [Perkinsus marinus ATCC
50983]
gi|239902818|gb|EER19590.1| nucleoside diphospahte hydrolase, putative [Perkinsus marinus ATCC
50983]
Length = 299
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 36 YHRTVNAW---IFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQE 92
YH++ I + T + +Q+R D KD PG WD G + G++ ++A REL+E
Sbjct: 152 YHKSFRCTYLVIRNKPTGKYYVQQRTDIKDYMPGRWDPVPGGTMGVGETPEVNAHRELKE 211
Query: 93 ELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
E+GI++ + F+ +F V ++ F V+L T +P+E+ LQ+ EV
Sbjct: 212 EMGIDIAEGDFKKLFV----QVSHEAPL--RVFGHVFLCET--DLPVESLKLQECEVKQC 263
Query: 153 KYIAYEEYKNLLAKDDPSFVP 173
K + +E ++A D VP
Sbjct: 264 KLMTEDE---IMAMDTSEVVP 281
>gi|357406220|ref|YP_004918144.1| NUDIX hydrolase [Methylomicrobium alcaliphilum 20Z]
gi|351718885|emb|CCE24559.1| NUDIX hydrolase [Methylomicrobium alcaliphilum 20Z]
Length = 199
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ +E+L ++ + G RS +HR HR+ + +F +S L LQ+R+ KD P
Sbjct: 1 MHQEYLSIVDENDRVIG-NALRSIIHRDRLLHRSAHILVFNDSNL-LFLQKRSLTKDINP 58
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+WD S+AGH+ G+ A REL EELG+ + D +F V EF
Sbjct: 59 GLWDSSAAGHVDVGEDYDACALRELHEELGVQV--DRLSPLFKLSATPV------TGMEF 110
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+VY P F+L E+ ++ +E + DDP+
Sbjct: 111 IEVYRCDHNGP-----FSLAAEEIEEGRWFDTKEIDARVNNDDPTLT 152
>gi|300813934|ref|ZP_07094238.1| hydrolase, NUDIX family [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511997|gb|EFK39193.1| hydrolase, NUDIX family [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 167
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQ 91
R G YH WI+ S ++ ++QRR+ K S+PGMW S+ G +G++S +RE
Sbjct: 25 RKGQYHLISEGWIY-RSDKKFIIQRRSLEKSSFPGMWYCSAGGSCISGETSKEGMKREFF 83
Query: 92 EELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSA 151
EELGI++P + + ++ FI + ++LV I LE TLQ+ EV
Sbjct: 84 EELGIDIPIEDIRL------KRIVTGKNFIFH----IFLVR--KDIDLEDLTLQKEEVMD 131
Query: 152 VKYIAYEEYKNLLAK 166
V EE ++ K
Sbjct: 132 VALATEEEIFQMIDK 146
>gi|298528344|ref|ZP_07015748.1| NUDIX hydrolase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511996|gb|EFI35898.1| NUDIX hydrolase [Desulfonatronospira thiodismutans ASO3-1]
Length = 369
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDS 63
V ++E L+V+ G G PR VH HR V+ +F + + LLLQ+R+ K
Sbjct: 201 VQEQEILEVVDREGCVLG-AAPRKRVHGNNSLLHRVVHVLVFDDQDR-LLLQKRSLNKRV 258
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113
PG WD S GH+ G+S + RE+QEELGI P+D +F + ++ N
Sbjct: 259 APGRWDTSVGGHVDCGESIETAMYREMQEELGIR-PRDV-QFAYKYIHSN 306
>gi|297171747|gb|ADI22739.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured verrucomicrobium HF0500_27H16]
Length = 169
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R EVH YHR V+ IF ++ Q + LQ+R+ KD+ PG WD S++GH+ +G+ +A
Sbjct: 26 RREVHAQELYHRAVHILIFNKAGQ-IFLQKRSMAKDTHPGCWDSSASGHLGSGEDYHTAA 84
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN--EFADVYLVTTLNPIPLEAFTL 144
RE +EELG P+ + +I G N EF +VY T P+ T
Sbjct: 85 IREFREELGAEAPE----------LERLIKLGPSAANGREFIEVYRSTHSGPL-----TP 129
Query: 145 QQTEVSAVKYIAYEE 159
E+S ++ +E
Sbjct: 130 NPAEISEGRWFTEDE 144
>gi|227113035|ref|ZP_03826691.1| putative isopentenyl-diphosphate delta-isomerase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 179
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG+ + + E H G HR + ++F S Q+LLLQ+RA+ K G+W + H + G+
Sbjct: 16 TGVME-KQEAHVKGALHRAITVYVF-NSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGE 73
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+L +A R L EE+G+ + A +FT + ++++G I +E VY T + +P
Sbjct: 74 ETLQAAHRRLYEEMGL---RCALTPMFTLTYRLLLDNG-LIEHELGHVYFGVT-DDVP-- 126
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ EVS+ Y + +E +A F +
Sbjct: 127 --QMNPDEVSSYAYQSIDEVAQQMATTPEQFTAW 158
>gi|188589927|ref|YP_001920911.1| nudix-family protein [Clostridium botulinum E3 str. Alaska E43]
gi|251779949|ref|ZP_04822869.1| nudix-family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188500208|gb|ACD53344.1| nudix-family protein [Clostridium botulinum E3 str. Alaska E43]
gi|243084264|gb|EES50154.1| nudix-family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 169
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ +E LD+ G+KTG+ K R + G+++ + W+ S E+L+Q+RA + P
Sbjct: 1 MMDELLDIYDKNGEKTGVIKKRGAKLQDGEFNFAIELWVI-NSKNEILIQKRAACRKVLP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
+W +++ G+I +G+ + RE +EE+ + + K+ + N + D + ++
Sbjct: 60 NIWGMTT-GYIKSGEDTQNGCIREAKEEIDLEILKEDLNLICNLTHGNTMWDVFAVKKDY 118
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
+ LQ+ EVS +K+++ E+K ++
Sbjct: 119 ------------DISRAVLQKEEVSEIKWVSINEFKEMI 145
>gi|381405199|ref|ZP_09929883.1| isopentenyl-diphosphate delta-isomerase [Pantoea sp. Sc1]
gi|380738398|gb|EIB99461.1| isopentenyl-diphosphate delta-isomerase [Pantoea sp. Sc1]
Length = 180
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F S QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NSRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ + FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTRDAAERRLREEMGMVVTLTPVFELSYNLKLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 115 GHVFFAVCDSLPQLNPQEADAF 136
>gi|297171466|gb|ADI22466.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured gamma proteobacterium HF0500_07A21]
Length = 178
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E L V+ Q G + R ++HR+ HR ++ +F + Q + LQ+R K PG+W
Sbjct: 7 EILSVVNDQDQVIG-QRRRDDIHRLNLSHRAIHVLVFRQDGQ-IFLQKRGRHKQESPGLW 64
Query: 69 DISSAGHISAGDSSLISAQRELQEELG---INLPKDAFEFV 106
D S AGH+ AG++ RE++EE+G I +PK F+ V
Sbjct: 65 DSSVAGHVDAGETYDACCVREIREEIGIREIEMPKRLFKLV 105
>gi|237665662|ref|ZP_04525650.1| MutT/NUDIX family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237658609|gb|EEP56161.1| MutT/NUDIX family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 142
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ T KT T R E + D+ R V S E+L+Q+R FK WP MW
Sbjct: 2 EIWDLYTKDRIKTDKTMIRGE-KIIKDFFRVVVHVCIFNSQGEMLIQQRQPFKSGWPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G +GD+S +A+RE+ EE+G + D T IN + F D+
Sbjct: 61 DITVGGSAISGDTSQSAAEREVYEEIGYKISLDGIRPSLT------IN----FDEGFDDM 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
YL+ I + +LQ EV + + ++Y
Sbjct: 111 YLIK--QDINISKLSLQYEEVKKLNGLQRKKY 140
>gi|421081589|ref|ZP_15542499.1| Isopentenyl-diphosphate Delta-isomerase 2 [Pectobacterium wasabiae
CFBP 3304]
gi|401703678|gb|EJS93891.1| Isopentenyl-diphosphate Delta-isomerase 2 [Pectobacterium wasabiae
CFBP 3304]
Length = 179
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
+ TG+ + + E H G HR + +IF S Q+LLLQ+RA+ K G+W + H +
Sbjct: 14 KPTGVME-KQEAHVKGVLHRAITVYIF-NSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAP 71
Query: 79 GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT----- 133
G+ +L +A R L EE+G+ + A +FT + +++G I +E VY T
Sbjct: 72 GEETLQAAHRRLYEEMGL---RCALTPMFTLTYRLPLDNG-LIEHELGHVYFGVTDDIPN 127
Query: 134 LNPIPLEAFTLQQTEVSAVKYIAYEE 159
+NP + ++ Q + A + +A E
Sbjct: 128 INPDEVSSYEYQSLDEIAGRMVATPE 153
>gi|170016538|ref|YP_001727457.1| NTP pyrophosphohydrolase including oxidative damage repair enzymes
[Leuconostoc citreum KM20]
gi|169803395|gb|ACA82013.1| NTP pyrophosphohydrolase including oxidative damage repair enzymes
[Leuconostoc citreum KM20]
Length = 173
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E DV T QKTG + R E VG+YH N IF + Q +LLQ+R+ K S PG+
Sbjct: 10 DELWDVYTADKQKTGRSHRRGEQLNVGEYHLVTNGIIFNLAGQ-VLLQQRSFHKMSRPGL 68
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117
W G G++S + REL EE+ I +P F+ T + I D
Sbjct: 69 WTAEIGGSALVGETSQQALVRELSEEMNICVPAHQLRFLLTRRLSSWIED 118
>gi|218289290|ref|ZP_03493525.1| NUDIX hydrolase [Alicyclobacillus acidocaldarius LAA1]
gi|218240638|gb|EED07818.1| NUDIX hydrolase [Alicyclobacillus acidocaldarius LAA1]
Length = 211
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRA 58
M + +EE LD+ T G T PRS VH G +H+T +AWI E E L++Q R
Sbjct: 1 MGKDAQREEWLDIFTSEMIPCG-TAPRSMVHERGLWHQTFHAWIATERGPEGRLVVQLRG 59
Query: 59 DFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118
KD+ P D+S+AGH+ AG+S RE++EELG+++P + + + + G
Sbjct: 60 ARKDTNPLRLDVSAAGHLEAGESPE-EGVREIEEELGLHVPAERLHKLGVMAHEARLGTG 118
Query: 119 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
+ EF +Y V + + LEA E++ + ++ ++ +L
Sbjct: 119 --WDREFNHLY-VAIVPDLSLEALRPAVDEIAGIYELSVRDFLDL 160
>gi|414597267|ref|ZP_11446836.1| MutT/nudix family protein [Leuconostoc citreum LBAE E16]
gi|421878558|ref|ZP_16310037.1| MutT/nudix family protein [Leuconostoc citreum LBAE C11]
gi|390447464|emb|CCF26157.1| MutT/nudix family protein [Leuconostoc citreum LBAE C11]
gi|390481922|emb|CCF28897.1| MutT/nudix family protein [Leuconostoc citreum LBAE E16]
Length = 173
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E DV T QKTG + R E VG+YH N IF + Q +LLQ+R+ K S PG+
Sbjct: 10 DELWDVYTADKQKTGRSHRRGEQLNVGEYHLVTNGIIFNLAGQ-VLLQQRSFHKMSRPGL 68
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT 108
W G G++S + REL EE+ I +P F+ T
Sbjct: 69 WTAEIGGSALVGETSQQALVRELSEEMNICVPAHQLRFLLT 109
>gi|378767997|ref|YP_005196467.1| isopentenyl-diphosphate delta-isomerase [Pantoea ananatis LMG 5342]
gi|386015167|ref|YP_005933447.1| isopentenyl-diphosphate delta- isomerase Idi [Pantoea ananatis
AJ13355]
gi|386080100|ref|YP_005993625.1| isopentenyl-diphosphate delta- isomerase Idi [Pantoea ananatis
PA13]
gi|327393229|dbj|BAK10651.1| isopentenyl-diphosphate delta- isomerase Idi [Pantoea ananatis
AJ13355]
gi|354989281|gb|AER33405.1| isopentenyl-diphosphate delta- isomerase Idi [Pantoea ananatis
PA13]
gi|365187480|emb|CCF10430.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea ananatis
LMG 5342]
Length = 177
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F + QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NTRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ L FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTKEAAERRLREEMGMILSLTPVFELSYNLPLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 115 GHVFFAVSDALPVLNPQEADAF 136
>gi|291616802|ref|YP_003519544.1| Idi [Pantoea ananatis LMG 20103]
gi|291151832|gb|ADD76416.1| Idi [Pantoea ananatis LMG 20103]
Length = 210
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F + QELLLQRRA K
Sbjct: 36 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NTRQELLLQRRASDK 87
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ L FE + N + + ++
Sbjct: 88 YHCGGLWSNTCCGHPYPHESTKEAAERRLREEMGMILSLTPVFELSYNLPLSNGLTEHEY 147
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 148 GHVFFAVSDALPVLNPQEADAF 169
>gi|308186151|ref|YP_003930282.1| isopentenyl-diphosphate delta-isomerase [Pantoea vagans C9-1]
gi|308056661|gb|ADO08833.1| isopentenyl-diphosphate delta-isomerase [Pantoea vagans C9-1]
Length = 180
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F S QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NSRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ + FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTRDAAERRLREEMGMIVTLTPVFELSYNLKLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 115 GHVFFAVCDSLPQLNPQEADAF 136
>gi|296392963|ref|YP_003657847.1| isopentenyl-diphosphate delta-isomerase [Segniliparus rotundus DSM
44985]
gi|296180110|gb|ADG97016.1| isopentenyl-diphosphate delta-isomerase, type 1 [Segniliparus
rotundus DSM 44985]
Length = 189
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 11 LDVLTMTGQKTGITKPRSEVHRV-GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD 69
+D++ G+ TG+ +P ++ HR G HR + + + E+LLQRR+ K+ WPG W
Sbjct: 24 VDLVDAQGRSTGV-RPVADAHRAPGVLHRAFSVLLLRDG-NEMLLQRRSVAKERWPGFWS 81
Query: 70 ISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117
S GH + D+ + A+R + EELGI + DA E +F+ + + +
Sbjct: 82 NSCCGHPRSADTLVDDAKRRVFEELGIRV--DALEHAGSFVYRATLRE 127
>gi|333397484|ref|ZP_08479297.1| NUDIX hydrolase [Leuconostoc gelidum KCTC 3527]
gi|406599273|ref|YP_006744619.1| NUDIX hydrolase [Leuconostoc gelidum JB7]
gi|406370808|gb|AFS39733.1| NUDIX hydrolase [Leuconostoc gelidum JB7]
Length = 180
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV + TG T R + VGDYH VNA IF +LLQ+R+ K ++P MW
Sbjct: 13 ELWDVYDEKNKLTGRTHHRGDKLNVGDYHLVVNAIIF-NIQGNVLLQQRSFQKITYPSMW 71
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 106
++ G G++S ++ REL EEL + + +D +FV
Sbjct: 72 TTATGGSALTGETSELAIIRELHEELNLTVTRDQLQFV 109
>gi|281425624|ref|ZP_06256537.1| putative NTP pyrophosphohydrolase [Prevotella oris F0302]
gi|281400211|gb|EFB31042.1| putative NTP pyrophosphohydrolase [Prevotella oris F0302]
Length = 169
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 23/151 (15%)
Query: 27 RSEVHRVG-DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
R E H H V+ +F S EL LQ+R D+KD PG WD + GHI G++ I+
Sbjct: 24 RKEAHNGSKQLHPVVHLHVF-NSKGELYLQKRPDWKDIQPGKWDTACGGHIDLGENVEIA 82
Query: 86 AQRELQEELGIN--LPKDAFEFVFTFLQQNVINDGKFINNEFADVYL-VTTLNPIPLEAF 142
+RE+QEELGI +PK ++VF N E +Y+ TT N +
Sbjct: 83 LKREVQEELGITDYIPKRIGQYVFE------------SNCEKELIYVHKTTYNKV----L 126
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKD--DPSF 171
Q E++ ++ EE K+ L K+ P+F
Sbjct: 127 HPNQEELNGGRFWTSEEIKSNLGKNIFTPNF 157
>gi|345882782|ref|ZP_08834238.1| hypothetical protein HMPREF0666_00414 [Prevotella sp. C561]
gi|345044491|gb|EGW48530.1| hypothetical protein HMPREF0666_00414 [Prevotella sp. C561]
Length = 663
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 175/423 (41%), Gaps = 67/423 (15%)
Query: 401 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNYYDSD---IAWI-ELDSELD 456
+Y + + + L++A + + +R++ + + + +D D I W+ E + +D
Sbjct: 228 KYGAAIRKIVFWLNRAKEFVENKRQQRVIELLIRYYETGDLHDFDTYSIEWLREQNGRID 287
Query: 457 VTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDV 516
G E Y D + G K ++E + +D KAT + + N Q E + P+ ++ + V
Sbjct: 288 FINGFIEVYGDPM-GLKGSWEGIVEYKDLKATHRTQTISANAQWFEDHSPIKPLFRKEVV 346
Query: 517 IAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE----AKFKNIL 572
V+ GD + NLPN + I + G+ V + N++ A N
Sbjct: 347 KGVTANVVCAAMLGGDEYPSSAIGINLPNADWIRAEHGSKSVTISNLTHAYNMAAKGNGF 406
Query: 573 RPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIG---PHSITLPDGRQSTVRLEL 625
R + I + + L++ + T H HEC HG G P T PD L
Sbjct: 407 RE--EFVIDDDTRRLLELYADKTDDLHTDLHECLGHGSGRLLPG--TDPDA--------L 454
Query: 626 QELHSAMEEAKADIVGLWALKFLIGRDLLP---KSLVKSMYVSFLAGCF--RSVRFG--- 677
+ + +EEA+AD+ GL+ + L +L + K+ Y S++ + VR
Sbjct: 455 KNYGNTIEEARADLFGLYYIADLKLLELGLLDNEEAYKAQYYSYMMNGLLTQQVRIKPGK 514
Query: 678 -LEESHGKGQALQFNWLFEKEAFILHSDD-----------------TFSV--DFDKVEGA 717
+EESH + +AL W E L DD TF D++ +
Sbjct: 515 QIEESHMQNRALIAQWALE-----LGKDDNVVELVTCKDEKTGQSKTFVRINDYETLRYI 569
Query: 718 VESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVA--LQKLENVQVPVDIAPTFTAVN 775
EI I++ GD A L++KY + A L++ EN ++IAP +N
Sbjct: 570 FAYQLAEIQRIKSEGDFYMARALVEKYAIKLNSVLHAEVLRRYEN----LNIAPYKGFIN 625
Query: 776 KLL 778
+L
Sbjct: 626 PVL 628
>gi|50121713|ref|YP_050880.1| isopentenyl-diphosphate delta-isomerase [Pectobacterium
atrosepticum SCRI1043]
gi|81170656|sp|Q6D3F5.1|IDI_ERWCT RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|49612239|emb|CAG75689.1| putative isopentenyl-diphosphate delta-isomerase [Pectobacterium
atrosepticum SCRI1043]
Length = 179
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG+ + + E H G+ HR + +IF S Q+LLLQ+RA+ K G+W + H + G+
Sbjct: 16 TGVME-KQEAHVKGELHRAITVYIF-NSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGE 73
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL-----VTTLN 135
+L +A R L EE+G+ + A +FT + +++G I +E VY V +N
Sbjct: 74 ETLQAAHRRLYEEMGL---RCALTPMFTLTYRLQLDNG-LIEHELGHVYFGVTDDVPQIN 129
Query: 136 PIPLEAFTLQ 145
P + ++ Q
Sbjct: 130 PDEVSSYEYQ 139
>gi|297172651|gb|ADI23619.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured gamma proteobacterium HF4000_06A21]
Length = 177
Score = 63.9 bits (154), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R EVH+ G HR V+ IF + + Q+RA +K+S PG+WD S AGH+ AG+S
Sbjct: 26 RDEVHQKGLRHRAVHVLIF-DGDGQFFFQKRALYKESSPGLWDSSVAGHVDAGESYDQCC 84
Query: 87 QRELQEELGINLPK 100
RE+ EE+G+ + K
Sbjct: 85 LREVAEEVGLVIKK 98
>gi|161831576|ref|YP_001596532.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii RSA 331]
gi|161763443|gb|ABX79085.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii RSA 331]
Length = 503
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSW 64
+E+ + ++ ++ GI + + + HR G HR + +IF+ E LLLQ+R K
Sbjct: 331 REQRVVLVDENDRRLGIEE-KIKAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHS 389
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
G+W + H + + + +R L EE G+ +P K EF +T N + I N
Sbjct: 390 GGLWTNTCCSHPRPDEDIVTAGERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIEN 444
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+ V + T +A + E+SAV++I E KN L ++ F P+
Sbjct: 445 EYDHVLIGFT----DADAIDFNKKEISAVRWIRVSELKNELKENPSHFTPW 491
>gi|154707588|ref|YP_001424026.1| diphosphomevalonate decarboxylase [Coxiella burnetii Dugway
5J108-111]
gi|165918973|ref|ZP_02219059.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii Q321]
gi|154356874|gb|ABS78336.1| diphosphomevalonate decarboxylase [Coxiella burnetii Dugway
5J108-111]
gi|165917298|gb|EDR35902.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii Q321]
Length = 503
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSW 64
+E+ + ++ ++ GI + + + HR G HR + +IF+ E LLLQ+R K
Sbjct: 331 REQRVVLVDENDRRLGIEE-KIKAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHS 389
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
G+W + H + + + +R L EE G+ +P K EF +T N + I N
Sbjct: 390 GGLWTNTCCSHPRPDEDIVTAGERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIEN 444
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+ V + T +A + E+SAV++I E KN L ++ F P+
Sbjct: 445 EYDHVLIGFT----DADAIDFNKKEISAVRWIRVSELKNELKENPSHFTPW 491
>gi|378579069|ref|ZP_09827738.1| isopentenyl-diphosphate delta-isomerase [Pantoea stewartii subsp.
stewartii DC283]
gi|377818113|gb|EHU01200.1| isopentenyl-diphosphate delta-isomerase [Pantoea stewartii subsp.
stewartii DC283]
Length = 177
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F + QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NARQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ L FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTKDAAERRLREEMGMTLSLTPIFELSYNLPLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNPIPLEAF 142
+ FA + LNP +AF
Sbjct: 115 GHVFFAVSDELPQLNPQEADAF 136
>gi|29653945|ref|NP_819637.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii RSA 493]
gi|29541208|gb|AAO90151.1| diphosphomevalonate decarboxylase [Coxiella burnetii RSA 493]
Length = 503
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSW 64
+E+ + ++ ++ GI + + + HR G HR + +IF+ E LLLQ+R K
Sbjct: 331 REQRVVLVDENDRRLGIEE-KIKAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHS 389
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
G+W + H + + + +R L EE G+ +P K EF +T N + I N
Sbjct: 390 GGLWTNTCCSHPRPDEDIVTAGERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIEN 444
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+ V + T +A + E+SAV++I E KN L ++ F P+
Sbjct: 445 EYDHVLIGFT----DADAIDFNKKEISAVRWIRVSELKNELKENPSHFTPW 491
>gi|288942246|ref|YP_003444486.1| isopentenyl-diphosphate delta-isomerase, type 1 [Allochromatium
vinosum DSM 180]
gi|288897618|gb|ADC63454.1| isopentenyl-diphosphate delta-isomerase, type 1 [Allochromatium
vinosum DSM 180]
Length = 185
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
E H +G HR + +F + ELLLQRRAD K + W + GH G+++ ++A R
Sbjct: 38 EPHELGQLHRAFSILVF-NAEGELLLQRRADSKYHFASRWSNTCCGHPRPGETTPMAAGR 96
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADV-YLVTTLNPIPLEAFTLQQ 146
L+EE GI +P + EFV+ + I +E+ V Y V T P P
Sbjct: 97 RLKEEFGIRVPLNERAEFVYRAEDEA----SGLIEHEYLHVFYGVHTEAPRP------DP 146
Query: 147 TEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
TE+ A +++A K L + F P+
Sbjct: 147 TEIGAWRWMAVPAIKRALRRHPEWFTPW 174
>gi|429123133|ref|ZP_19183666.1| nudix hydrolase [Brachyspira hampsonii 30446]
gi|426280946|gb|EKV57949.1| nudix hydrolase [Brachyspira hampsonii 30446]
Length = 167
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E D+ KTG R DYH ++AW+ S E+++ +R K P M
Sbjct: 2 KEIWDIYDRNKNKTGRIHQRGIHLNKNDYHIVIHAWV-VNSNDEVIMTKRHSSKKICPNM 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W+ + G I +G+ S+ A REL+EE+G++ KD F+ +F+ + +N D
Sbjct: 61 WECTE-GSILSGEDSINGALRELKEEIGLSFKKDEAVFLTSFVLE--------FSNTIVD 111
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
++ + LE LQ EVS + E+Y
Sbjct: 112 SFMFR--RDVKLEELILQDNEVSDAMIVNREKY 142
>gi|84497359|ref|ZP_00996181.1| isopentenyl-diphosphate delta-isomerase [Janibacter sp. HTCC2649]
gi|84382247|gb|EAP98129.1| isopentenyl-diphosphate delta-isomerase [Janibacter sp. HTCC2649]
Length = 186
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRV-GDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
++E + +L G+ G T P++ VH H + ++F + LL RRA K +WP
Sbjct: 5 RDELVVLLGDDGRPIG-TAPKATVHHSETPLHLAFSCYVF-DPAGRFLLTRRALTKKTWP 62
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+ + QR +++ELG L V + I D + NE
Sbjct: 63 GVWTNSCCGHPGPGEPVEEAVQRRVRQELGTEL--TGIRLVLPDFRYRAIMDDGTVENEL 120
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
VY T +P A L EV+ V+++ + ++
Sbjct: 121 CPVYAATCPDP---RALVLDPAEVAEVEWVDWAAFR 153
>gi|406901769|gb|EKD44353.1| hypothetical protein ACD_71C00170G0007 [uncultured bacterium (gcode
4)]
Length = 230
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
++E H ++H+ + WI+ S E+LLQ+R KD +WDIS+A HI +S
Sbjct: 59 KAEAHESWEFHQAGHVWIYN-SKWEILLQKRTQGKDVDSWLWDISAAWHIEMWESMEKWT 117
Query: 87 QRELQEELGINLPKDAF-----EFVFTFLQ--QNVINDGKFINNEFADVYLVTTLNPIPL 139
REL+EELG A E ++T+++ + +I + NNE VY++ P+
Sbjct: 118 LRELREELGEKWINKALKIHQPEHIYTYIEDIKRIIQWKDWHNNELNSVYILKY--DWPI 175
Query: 140 EAFTLQQTEVSAVKYIAYEEYKNLLAKDDP 169
E Q+ E+ ++K+I E+++ + +DP
Sbjct: 176 EELEKQEEEIESIKFIPLEQFEQEI--NDP 203
>gi|300871033|ref|YP_003785905.1| nudix hydrolase [Brachyspira pilosicoli 95/1000]
gi|300688733|gb|ADK31404.1| nudix hydrolase [Brachyspira pilosicoli 95/1000]
Length = 164
Score = 63.2 bits (152), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
GDYH ++AW+ S E++L +R K+ P MW+ + G I AG+SS+ A REL+EE
Sbjct: 28 GDYHIVIHAWV-VNSNDEVILTKRHSSKNICPNMWECTE-GSIVAGESSVDGAIRELKEE 85
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
+G++ D F+ +F+ +N D Y+ + + LQ+ EVS K
Sbjct: 86 IGLSFKVDEATFLTSFVLD--------FSNTIIDSYVFK--RDVDINDLILQKNEVSEAK 135
Query: 154 YIAYEEYKNL 163
+ + Y+ +
Sbjct: 136 IVDEKVYREM 145
>gi|78357034|ref|YP_388483.1| NUDIX hydrolase [Desulfovibrio alaskensis G20]
gi|78219439|gb|ABB38788.1| NUDIX hydrolase [Desulfovibrio alaskensis G20]
Length = 184
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 23 ITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSS 82
+ P VHR G H+ + ++ + L LQ+RA K +PG WD+S+ GH+ AG+++
Sbjct: 31 LVMPAESVHRQGLNHKIILVLLY-DLQGRLYLQKRAASKTVYPGRWDLSATGHVQAGEAA 89
Query: 83 LISAQRELQEELGI 96
+ +A REL+EELG+
Sbjct: 90 MDAAVRELREELGV 103
>gi|300172606|ref|YP_003771771.1| NUDIX hydrolase [Leuconostoc gasicomitatum LMG 18811]
gi|333447928|ref|ZP_08482870.1| NUDIX hydrolase [Leuconostoc inhae KCTC 3774]
gi|299886984|emb|CBL90952.1| NUDIX hydrolase [Leuconostoc gasicomitatum LMG 18811]
Length = 175
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 12 DVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
D+ + TG T R E VGDYH VNA IF +LLQ+R+ K + PGMW I+
Sbjct: 16 DIYDEKNELTGRTHHRGEKLNVGDYHLVVNALIF-NIQGNVLLQQRSFQKITDPGMWTIA 74
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 106
+ G G++S + REL EEL + + K+ +F+
Sbjct: 75 TGGSALTGETSESAVIRELHEELNLIVTKNQLQFL 109
>gi|375342999|gb|AFA54936.1| dimethyladenosine transferase [uncultured Akkermansia sp. SMG25]
Length = 450
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E DV+ Q TG T R E+H + HR V+ ++ + +LLQ+R+ KD PG
Sbjct: 282 DELFDVVDELNQMTG-TGTRREIHEMDLRHRAVHMFLVNKHGA-VLLQKRSMRKDRQPGR 339
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGIN 97
WD S+AGH+ AG+ +A REL+EELG+
Sbjct: 340 WDSSAAGHLDAGEDYDQAAVRELEEELGVT 369
>gi|338812504|ref|ZP_08624678.1| mutator MutT protein [Acetonema longum DSM 6540]
gi|337275545|gb|EGO64008.1| mutator MutT protein [Acetonema longum DSM 6540]
Length = 161
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE D+ K G+T+ R E G YH V+AW+ + L+ QR+++ +P
Sbjct: 2 EELWDLYDGDRNKIGLTQKRGEPIPEGYYHLVVSAWVVNDQGHYLMSQRQSN--KPYPLC 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W+ + G + G+SSL A RE+ EELG+NL + V+ ++ +F D
Sbjct: 60 WE-CTGGSVLLGESSLQGALREVYEELGLNLETTPAKLVYQIRREQT--------QDFYD 110
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
V+L NP +E TLQ EV+ +++ E+ L
Sbjct: 111 VWLFHA-NP-SIEFLTLQDDEVADAQWMDKEKIYTL 144
>gi|302344305|ref|YP_003808834.1| NUDIX hydrolase [Desulfarculus baarsii DSM 2075]
gi|301640918|gb|ADK86240.1| NUDIX hydrolase [Desulfarculus baarsii DSM 2075]
Length = 165
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E L+V+ G+ + R ++H G HR V+ +F ++ + L LQRR+ KD+ PG
Sbjct: 7 DEVLEVVDGRDTVIGLAR-RGDIHAQGLLHRAVHVLVFDQAGR-LYLQRRSANKDTHPGK 64
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGI 96
W S++GH+ G+S +A+REL EELG+
Sbjct: 65 WTSSASGHVDPGESYEQAARRELAEELGL 93
>gi|296111029|ref|YP_003621410.1| hypothetical protein LKI_04495 [Leuconostoc kimchii IMSNU 11154]
gi|339491753|ref|YP_004706258.1| hypothetical protein LGMK_07930 [Leuconostoc sp. C2]
gi|295832560|gb|ADG40441.1| hypothetical protein LKI_04495 [Leuconostoc kimchii IMSNU 11154]
gi|338853425|gb|AEJ31635.1| hypothetical protein LGMK_07930 [Leuconostoc sp. C2]
Length = 183
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E D+ Q TG R +G+YH VNA IF Q +L+Q+R+ K S+PG+
Sbjct: 12 DEVWDIYDENRQLTGRKHLRGRKLGIGEYHLVVNALIFNVDGQ-ILMQQRSFNKMSYPGI 70
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W ++ G G++S + REL EEL +++ + +FV N I +I D
Sbjct: 71 WTTATGGSALTGENSQQAIIRELSEELSLSVTPNQLQFV------NSIQYTDWI----ED 120
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
++V+T I + Q++E+ A+++ +E
Sbjct: 121 WFVVST--DISIRQLVYQRSEIEAIRWTTLKE 150
>gi|303246606|ref|ZP_07332884.1| NUDIX hydrolase [Desulfovibrio fructosovorans JJ]
gi|302491946|gb|EFL51824.1| NUDIX hydrolase [Desulfovibrio fructosovorans JJ]
Length = 178
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
++E HR +HR+V ++ + +L LQ+R KD +PG +D+S+ GH+ AG++ +A
Sbjct: 29 KAEAHRQSLFHRSVMVLVY-NAQGKLYLQKRGANKDLYPGRFDLSATGHVRAGEARRDAA 87
Query: 87 QRELQEELGIN---------LP---KDAFEFVFTF 109
REL EELG+ +P + A+EFV F
Sbjct: 88 ARELHEELGLRAKTLTFIDAIPASQETAYEFVTLF 122
>gi|221632520|ref|YP_002521741.1| NUDIX family hydrolase [Thermomicrobium roseum DSM 5159]
gi|221155392|gb|ACM04519.1| hydrolase, NUDIX family protein [Thermomicrobium roseum DSM 5159]
Length = 248
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE---LLLQRRADFKDS 63
Q+E DVLT G+ TG R VH+ G +H + WI A +T E +LLQRR+ KD+
Sbjct: 11 QDEIFDVLTQDGELTGERAARWLVHQNGLWHPAFHLWI-AWATPEGLRVLLQRRSLTKDT 69
Query: 64 WPGMWDISSAGHISAGDS---------SLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114
PG D+S GH AG+ L + RE+ EELG L +++ T + V
Sbjct: 70 MPGRVDVSVGGHFKAGEFVPGQPLAPLMLAAIVREVNEELGFRLEPSVIQWLGTRWSEAV 129
Query: 115 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
+ E YL L PL A EV+A+ ++ LL ++
Sbjct: 130 --QANICDREVQ--YLYFWLRDEPLVAIEPDPREVAALLAVSVRGLLELLEQE 178
>gi|431808153|ref|YP_007235051.1| nudix hydrolase [Brachyspira pilosicoli P43/6/78]
gi|430781512|gb|AGA66796.1| nudix hydrolase [Brachyspira pilosicoli P43/6/78]
Length = 164
Score = 62.8 bits (151), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
GDYH ++AW+ S E++L +R K+ P MW+ + G I AG+SS+ A REL+EE
Sbjct: 28 GDYHIVIHAWV-VNSNDEVILTKRHSSKNICPNMWECTE-GSIVAGESSVDGAIRELKEE 85
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
+G++ D F +F+ +N D Y+ + + LQ+ EVS K
Sbjct: 86 IGLSFKVDEATFFTSFVLD--------FSNTIIDSYVFK--RDVDINDLILQENEVSEAK 135
Query: 154 YIAYEEYKNL 163
+ + Y+ +
Sbjct: 136 IVDEKVYREM 145
>gi|85817255|gb|EAQ38438.1| peptidase family M49 [Dokdonia donghaensis MED134]
Length = 675
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 168/448 (37%), Gaps = 65/448 (14%)
Query: 330 NFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNLDSSLSGHIVDATNHSVGS 389
NFY PD+ E A F+ IK + ++ L+ +V V
Sbjct: 193 NFYGPDVTTAE---------------AEQFYDAIKVDTNEPIEKGLNTRLVKENGKLVEQ 237
Query: 390 IYDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLS---NNYYDSDI 446
+Y + Y + L KA +A + ++ L + + + + + D I
Sbjct: 238 VYKSGGL-----YGEAIDNIIGWLEKAKTVAENEQQEKALGLLIEYYQTGSLDTWDDYCI 292
Query: 447 AW-IELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNL 505
AW + +D G E Y D GYK ++E + I+D + ++ + Q E N
Sbjct: 293 AWATSTEGNIDWINGFIEVYNDPK-GYKGSYETIVQIKDFDMSKKMAVLSTEAQWFEDNS 351
Query: 506 PMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSE 565
P+ +K + V + + + +GD + NLPN+ I + G+ V L N+
Sbjct: 352 PLMPEHKKETVKGVSYKTVIVAGEAGDASPSTPIGVNLPNNNWIRQTHGSKSVSLGNIIN 411
Query: 566 A--------KFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGR 617
A + K ++ + +E +L D H H + H+ +
Sbjct: 412 AYNNAGGSGRLKEFAHDEEEIALEEEYGQLGD--------KLHTALHEVVGHASGQINKG 463
Query: 618 QSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFG 677
T + L+ S +EE +AD+ GL+ +L+ L LV+ + A +R G
Sbjct: 464 VGTPKETLKRYKSTIEEGRADLFGLY---YLMDPKLQELGLVEDWEKTGKAAYDGYIRNG 520
Query: 678 L-------------EESHGKGQALQFNWLFEK-------EAFILHSDDTFSV-DFDKVEG 716
L EE+H + W +E+ E +++ D+ K+
Sbjct: 521 LITQLIRLELGDMVEEAHMVNRQWVSAWSYERGLEDNVIEKVTRDGKTYYNINDYVKLRE 580
Query: 717 AVESLSTEILTIQARGDKEAASLLLQKY 744
L E I + GD EAA L++ Y
Sbjct: 581 IFGELLRETQRITSEGDYEAAKNLVEDY 608
>gi|108761873|ref|YP_632107.1| NUDIX family hydrolase [Myxococcus xanthus DK 1622]
gi|108465753|gb|ABF90938.1| hydrolase, NUDIX family [Myxococcus xanthus DK 1622]
Length = 172
Score = 62.8 bits (151), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E +DV+ GQ G + PR +++ HR V+ + E ++ LQRR+ PG
Sbjct: 2 ELIDVIDTQGQVVG-SAPRDQIYGQKLPHRIVH--VMVERDGKVFLQRRSRHMTFMPGHL 58
Query: 69 DISSAGHISAGDSSLISAQRELQEELGIN---LPKDAFEFVF 107
S+ GH+SAG++ L +AQRELQEELG+ +P EFVF
Sbjct: 59 CTSAGGHVSAGEAPLEAAQRELQEELGLEGSLVP--VAEFVF 98
>gi|387604871|ref|YP_006099140.1| putative isopentenyl-diphosphate delta-isomerase [Escherichia coli
042]
gi|284924585|emb|CBG27757.1| putative isopentenyl-diphosphate delta-isomerase [Escherichia coli
042]
Length = 179
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 3 ESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD 62
E+V+ +H D +TGI + + H+ G HR V+ +I S +LLLQ+RA K
Sbjct: 2 ENVILIDHNDC------ETGIAE-KLYTHKKGILHRAVSVYI-CNSDGKLLLQQRALGKY 53
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN 122
PG+W +S H G+S+L +A R L+EE+GI P ++ NV G
Sbjct: 54 HSPGLWSNTSCTHPFPGESNLSAANRRLREEMGIECPLSKLLKIY----YNVYVGGDLTE 109
Query: 123 NEFADV-YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
+E A + Y ++ P+ L E + KY++ E + + ++ +F
Sbjct: 110 HEIAHIFYGISDDEPV------LNSLEAMSYKYVSLTELSSEIKFNNDAF 153
>gi|227326957|ref|ZP_03830981.1| putative isopentenyl-diphosphate delta-isomerase [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 179
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
+ TG+ + + E H G HR + +IF S Q+LLLQ+RA+ K G+W + H +
Sbjct: 14 RPTGVME-KQEAHVKGALHRAITVYIF-NSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAP 71
Query: 79 GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
G+ +L +A R L EE+G+ + A +FT + +++G I +E VY T + +P
Sbjct: 72 GEETLQAAHRRLYEEMGL---RCALTPMFTLTYRLPLDNG-LIEHELGHVYFGVT-DDVP 126
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ EVS+ +Y + ++ +A F +
Sbjct: 127 ----QMNPDEVSSYEYQSIDDIAQRMATTPDQFTAW 158
>gi|212212910|ref|YP_002303846.1| diphosphomevalonate decarboxylase [Coxiella burnetii CbuG_Q212]
gi|212011320|gb|ACJ18701.1| diphosphomevalonate decarboxylase [Coxiella burnetii CbuG_Q212]
Length = 503
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSW 64
+E+ + ++ ++ GI + + + HR G HR + +IF+ E LLLQ+R K
Sbjct: 331 REQRVVLVDENDRRLGIEE-KIKAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHS 389
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
G+W + H + + + +R L EE G+ +P K EF +T N + I N
Sbjct: 390 GGLWTNTCCSHPRPDEDIVTAGERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIEN 444
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+ V + T +A + E+SAV++I E KN L ++ F P+
Sbjct: 445 EYDHVLIGFT----DADAIDFNKKEISAVRWIRVSELKNELKENLSHFTPW 491
>gi|434381007|ref|YP_006702790.1| nudix hydrolase [Brachyspira pilosicoli WesB]
gi|404429656|emb|CCG55702.1| nudix hydrolase [Brachyspira pilosicoli WesB]
Length = 164
Score = 62.8 bits (151), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQ 91
+ GDYH ++AW+ E++L +R K+ P MW+ + G I AG+SS+ A REL+
Sbjct: 26 KYGDYHIVIHAWV-VNGNDEVILTKRHSSKNICPNMWECTE-GSIVAGESSVDGAIRELK 83
Query: 92 EELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSA 151
EE+G++ D F+ +F+ +N D Y+ + + LQ+ EVS
Sbjct: 84 EEIGLSFKVDEATFLTSFVLD--------FSNTIIDSYVFK--RDVDINDLILQENEVSE 133
Query: 152 VKYIAYEEYKNL 163
K + + Y+ +
Sbjct: 134 AKIVDEKVYREM 145
>gi|164659612|ref|XP_001730930.1| hypothetical protein MGL_1929 [Malassezia globosa CBS 7966]
gi|159104828|gb|EDP43716.1| hypothetical protein MGL_1929 [Malassezia globosa CBS 7966]
Length = 246
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL-------I 84
R G HR + ++F + +LLLQ+RA K ++P MW + H A + L
Sbjct: 56 REGLLHRAFSVFLFDPLSGKLLLQKRAQEKITFPNMWTNTCCSHPLAVRAELNGIAGAKQ 115
Query: 85 SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
+AQR+L+ ELGI +P ++F+F+ T + +DG + +E + +TT + L
Sbjct: 116 AAQRKLEHELGIPPTCVPLESFQFL-TRIHYLAPSDGLWGEHEIDYILFITT--SVDLH- 171
Query: 142 FTLQQTEVSAVKYIAYEEYKNLLAKDDP-SFVPY 174
+ + EV VK+++ EE K L+ + DP +F P+
Sbjct: 172 --VNENEVGDVKWVSIEELKALMNELDPDAFTPW 203
>gi|317047428|ref|YP_004115076.1| isopentenyl-diphosphate delta-isomerase [Pantoea sp. At-9b]
gi|316949045|gb|ADU68520.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. At-9b]
Length = 177
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSW 64
V+ +HLD T +K EVH G HR V ++F S ELLLQRRA K
Sbjct: 6 VILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NSRHELLLQRRASGKYHC 57
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
G+W + GH +S+ +A+R L+EE+G++L FE + N + + ++ +
Sbjct: 58 GGLWSNTCCGHPYPQESTQAAAERRLREEMGLSLTLTPVFELSYNLPLSNGLTEHEYGHV 117
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
FA LNP E A Y + + ++ +A+ F P+
Sbjct: 118 FFAISDEQPELNP----------EEADAWCYRSVAQIQHEIAQQPEQFTPW 158
>gi|409123407|ref|ZP_11222802.1| isopentenyl-diphosphate delta-isomerase [Gillisia sp. CBA3202]
Length = 172
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
P+ E H G HR + +IF E +EL+LQ+RA K PG+W + H G++++ +
Sbjct: 20 PKMEAHEKGLLHRAFSVFIFNEK-KELMLQQRALTKYHSPGLWTNTCCSHQREGETNIEA 78
Query: 86 AQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
+R LQEE+G + +D F++ N + + +F D LV N P L
Sbjct: 79 GKRRLQEEMGFSTELEDTISFIYKAPFDNGLTEHEF------DHILVGNYNKQP----QL 128
Query: 145 QQTEVSAVKYIAYEEYKNLLAKD---DPSFVPYDVNGGYGQLFNIISQRY 191
E A K++ ++ +AKD +P+ Y + F II ++Y
Sbjct: 129 NPEEAEAWKWVGLDD----VAKDMENNPT--------AYTEWFKIIFEKY 166
>gi|149372356|ref|ZP_01891544.1| isopentenyl-diphosphate delta-isomerase [unidentified eubacterium
SCB49]
gi|149354746|gb|EDM43309.1| isopentenyl-diphosphate delta-isomerase [unidentified eubacterium
SCB49]
Length = 172
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 22/187 (11%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
++EE + ++ ++ G+ P+ E H HR + ++F + EL+LQ+RA K P
Sbjct: 1 MKEEQVILVNEKDEQLGLM-PKLEAHEKAVLHRAFSVFVFNDQG-ELMLQQRAMHKYHSP 58
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNE 124
G+W + H G+S+L + R LQEE+G P K+ F++ N + + +
Sbjct: 59 GLWTNTCCSHQRDGESNLDAGLRRLQEEMGFTTPLKETTWFIYKAPFDNGLTEHEL---- 114
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLF 184
D LV N P ++ + EV+A K++ E+ K +AK +P+ Y + F
Sbjct: 115 --DHILVGNFNDSP----SINEDEVAAWKWMHLEDVKIDIAK-NPAI--------YTEWF 159
Query: 185 NIISQRY 191
II ++
Sbjct: 160 KIIFDKF 166
>gi|421873957|ref|ZP_16305566.1| putative Nudix hydrolase [Brevibacillus laterosporus GI-9]
gi|372457068|emb|CCF15115.1| putative Nudix hydrolase [Brevibacillus laterosporus GI-9]
Length = 215
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
+ R+EVHR G +H T + W + + Q R++ K +P + DI++AGH+ A +
Sbjct: 19 SASRAEVHRKGLWHETFHCWFISNENGIDYIHFQIRSEEKKDFPSLLDITAAGHLLAHE- 77
Query: 82 SLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
++ RE++EELGI + + V + +N I FI+ E + V+L + + I
Sbjct: 78 TIYDGIREIEEELGIRVS--FHDLVSLGVIKNCIIQKGFIDKELSHVFLYQSKHAIS--D 133
Query: 142 FTLQQTEVSAV 152
+TLQ EVS +
Sbjct: 134 YTLQPEEVSGM 144
>gi|390433249|ref|ZP_10221787.1| isopentenyl-diphosphate delta-isomerase [Pantoea agglomerans IG1]
Length = 180
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F S QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NSRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ + FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTRDAAERRLREEMGMVVTLTPVFELSYNLKLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNP 136
+ FA + LNP
Sbjct: 115 GHVFFAVCDSLPQLNP 130
>gi|325854341|ref|ZP_08171540.1| peptidase family M49 [Prevotella denticola CRIS 18C-A]
gi|325484135|gb|EGC87069.1| peptidase family M49 [Prevotella denticola CRIS 18C-A]
Length = 663
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 175/442 (39%), Gaps = 87/442 (19%)
Query: 403 NSYLTRASELLHK---AGDMASSPSLKRLLH--SKADAFLSN-----------NYYDS-- 444
NS L + ++ + D P++++++H +A F N YY++
Sbjct: 208 NSTLVKEGNVVREEVWKADGRYGPAIRKIVHWLDRAKEFAENKRQRDVIGLLIRYYETGD 267
Query: 445 -------DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGD 496
I W+ E D +D G E Y D + G K ++E + +D AT + K
Sbjct: 268 LHDFDAYSIEWLHEQDGHIDFVNGFIEVYGDPM-GLKGSWEGIVEYKDLDATRRTKAISA 326
Query: 497 NLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTS 556
N Q E + P++ ++ V V+ GD + NLPN + I + G+
Sbjct: 327 NAQWFEDHSPVNPLFRKPKVRGVSANVVCAAMLGGDEYPASAIGINLPNADWIRSEHGSK 386
Query: 557 MVMLKNVSEA----KFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIG- 607
V + N++ A N R + I E +L++ S T H HEC HG G
Sbjct: 387 SVTISNLTHAYNMSAKGNGFR--EEFVIDDETIKLMERFSDKTDDLHTDLHECLGHGSGR 444
Query: 608 --PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL---KFL-IGRDLLPKSLVKS 661
P T PD L+ + +EEA+AD+ GL+ + K L +G P++
Sbjct: 445 LLPG--TDPDA--------LKNYGNTIEEARADLFGLYYIADDKLLELGLLDSPEAYKAQ 494
Query: 662 MYVSFLAGCF-RSVRFG----LEESHGKGQALQFNWLFEKEAFILHSD-DTFSV------ 709
Y + G + VR +EE+H + +AL W A L +D D +
Sbjct: 495 YYGYMMNGLLTQQVRIKPDKQIEEAHMQNRALVARW-----AMALGADSDVVELVSREEE 549
Query: 710 ------------DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVAL-Q 756
D+ + EI I++ GD EAA L++ Y L L +
Sbjct: 550 KSGEWKTYVRINDYAALRRIFAYELAEIQRIKSEGDFEAARKLVETYAIH---LDSGLHE 606
Query: 757 KLENVQVPVDIAPTFTAVNKLL 778
++ +DIAP VN +L
Sbjct: 607 EMLRRYRHLDIAPYKGFVNPVL 628
>gi|372276113|ref|ZP_09512149.1| isopentenyl-diphosphate delta-isomerase [Pantoea sp. SL1_M5]
Length = 180
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 2 AESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK 61
A V+ +HLD T +K EVH G HR V ++F S QELLLQRRA K
Sbjct: 3 AIEVILVDHLDRPTGKMEKL-------EVHEKGLLHRAVTVYVF-NSRQELLLQRRASDK 54
Query: 62 DSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKF 120
G+W + GH +S+ +A+R L+EE+G+ + FE + N + + ++
Sbjct: 55 YHCGGLWSNTCCGHPYPHESTRDAAERRLREEMGMVVTLTPVFELSYNLKLSNGLTEHEY 114
Query: 121 INNEFADVYLVTTLNP 136
+ FA + LNP
Sbjct: 115 GHVFFAVCDSLPQLNP 130
>gi|257065910|ref|YP_003152166.1| NUDIX hydrolase [Anaerococcus prevotii DSM 20548]
gi|256797790|gb|ACV28445.1| NUDIX hydrolase [Anaerococcus prevotii DSM 20548]
Length = 171
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E LD+ KTG T R E + V+ IF + LL+Q+R K S +W
Sbjct: 2 EILDLYDENRIKTGKTYVRGEKMPENTFRLIVHLLIF-DDCGNLLIQKRQKTK-SMANLW 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI+ G S G++S + REL+EELGI L FT ++ + + K+ F D
Sbjct: 60 DITCGGAASTGETSKEAIARELREELGIKLD-------FTNIRPIITANFKY---GFDDF 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVN 177
YLV I ++ LQ+ EV+A K+ +++E +L+ ++ FV Y N
Sbjct: 110 YLVR--KNINIDEVKLQEEEVAACKWASFDEVIDLMERE--RFVRYKKN 154
>gi|327313552|ref|YP_004328989.1| peptidase family M49 [Prevotella denticola F0289]
gi|326944037|gb|AEA19922.1| peptidase family M49 [Prevotella denticola F0289]
Length = 663
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 175/442 (39%), Gaps = 87/442 (19%)
Query: 403 NSYLTRASELLHK---AGDMASSPSLKRLLH--SKADAFLSN-----------NYYDS-- 444
NS L + ++ + D P++++++H +A F N YY++
Sbjct: 208 NSTLVKEGNVVREEVWKADGRYGPAIRKIVHWLDRAKEFAENKRQRDVIGLLIRYYETGD 267
Query: 445 -------DIAWI-ELDSELDVTIGPYETYEDAIFGYKATFEAFIGIRDDKATAQVKLFGD 496
I W+ E D +D G E Y D + G K ++E + +D AT + K
Sbjct: 268 LHDFDAYSIEWLHEQDGHIDFVNGFIEVYGDPM-GLKGSWEGIVEYKDLDATRRTKAISA 326
Query: 497 NLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTS 556
N Q E + P++ ++ V V+ GD + NLPN + I + G+
Sbjct: 327 NAQWFEDHSPVNPLFRKPKVRGVSANVVCAAMLGGDEYPASAIGINLPNADWIRSEHGSK 386
Query: 557 MVMLKNVSEA----KFKNILRPIADVCIRKEQQELVDFDSFFT---HNICHECC-HGIG- 607
V + N++ A N R + I E +L++ S T H HEC HG G
Sbjct: 387 SVTISNLTHAYNMSAKGNGFR--EEFVIDDETIKLMERFSDKTDDLHTDLHECLGHGSGR 444
Query: 608 --PHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWAL---KFL-IGRDLLPKSLVKS 661
P T PD L+ + +EEA+AD+ GL+ + K L +G P++
Sbjct: 445 LLPG--TDPDA--------LKNYGNTIEEARADLFGLYYIADDKLLELGLLDSPEAYKAQ 494
Query: 662 MYVSFLAGCF-RSVRFG----LEESHGKGQALQFNWLFEKEAFILHSD-DTFSV------ 709
Y + G + VR +EE+H + +AL W A L +D D +
Sbjct: 495 YYGYMMNGLLTQQVRIKPDKQIEEAHMQNRALVARW-----AMALGADSDVVELVSREEE 549
Query: 710 ------------DFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVAL-Q 756
D+ + EI I++ GD EAA L++ Y L L +
Sbjct: 550 KSGEWKTYVRINDYAALRRIFAYELAEIQRIKSEGDFEAARKLVETYAIH---LDSGLHE 606
Query: 757 KLENVQVPVDIAPTFTAVNKLL 778
++ +DIAP VN +L
Sbjct: 607 EMLRRYRHLDIAPYKGFVNPVL 628
>gi|228473767|ref|ZP_04058512.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga gingivalis
ATCC 33624]
gi|228274788|gb|EEK13611.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga gingivalis
ATCC 33624]
Length = 176
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ E H+ G HR + ++F S +E+LLQ+RA K P +W + H AG++++ +
Sbjct: 20 KMEAHQKGLLHRAFSVFVF-NSKKEVLLQQRAACKYHSPNLWTNTCCSHPRAGETNIAAG 78
Query: 87 QRELQEELGINLP-KDAFEFVF 107
+R LQEE+G+ +P ++ F FV+
Sbjct: 79 ERRLQEEMGMKVPLQEVFSFVY 100
>gi|406915239|gb|EKD54338.1| hypothetical protein ACD_60C00091G0003 [uncultured bacterium]
Length = 175
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 31 HRVGDYHRTVNAWIFAES-TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRE 89
HR HR + +IF E T ELLLQ+RA K PG+W + H G++++I+ QR
Sbjct: 26 HREALCHRAFSVFIFREKETLELLLQQRAFHKYHSPGLWTNTCCSHPYPGENTIIAGQRR 85
Query: 90 LQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEV 149
L+EE+GI + ++V +F +G NE V + +++ +A T+ EV
Sbjct: 86 LREEMGIEI---MLKWVGSFHYIAHFENG-LTENEVDHVLIGKSVD----DALTINPLEV 137
Query: 150 SAVKYIAYEEYKNLLAKDDPSFVPY 174
++I+ + K + + F P+
Sbjct: 138 EDYRWISLPKLKKEMHELPEKFTPW 162
>gi|390950315|ref|YP_006414074.1| isopentenyl-diphosphate delta-isomerase [Thiocystis violascens DSM
198]
gi|390426884|gb|AFL73949.1| isopentenyl-diphosphate delta-isomerase [Thiocystis violascens DSM
198]
Length = 190
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
+VHR GD HR + +F + +LLLQRRAD K + W + GH G+S+ ++A R
Sbjct: 43 DVHRTGDLHRAFSILVF-NADGDLLLQRRADVKYHFAKRWSNTCCGHPRPGESTSMAAGR 101
Query: 89 ELQEELGINLP 99
L+EE GI +P
Sbjct: 102 RLKEEFGIRVP 112
>gi|307719721|ref|YP_003875253.1| nudix hydrolase 3 [Spirochaeta thermophila DSM 6192]
gi|306533446|gb|ADN02980.1| nudix hydrolase 3 [Spirochaeta thermophila DSM 6192]
Length = 174
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 24 TKPRSEVHR-VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSS 82
T PR HR G HRTV+ + E+LLQRR+ KD PG WD + GH+ G+
Sbjct: 25 TAPREACHRDPGLMHRTVHV-VVMNRRGEVLLQRRSMRKDVCPGRWDTAVGGHVRPGEDH 83
Query: 83 LISAQRELQEELGI 96
+A+REL+EELG+
Sbjct: 84 EEAARRELREELGL 97
>gi|386347812|ref|YP_006046061.1| NUDIX hydrolase [Spirochaeta thermophila DSM 6578]
gi|339412779|gb|AEJ62344.1| NUDIX hydrolase [Spirochaeta thermophila DSM 6578]
Length = 174
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 24 TKPRSEVHR-VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSS 82
T PR HR G HRTV+ + E+LLQRR+ KD PG WD + GH+ G+
Sbjct: 25 TAPREACHRDPGLMHRTVHV-VVMNRRGEVLLQRRSIRKDVCPGRWDTAVGGHVRPGEDH 83
Query: 83 LISAQRELQEELGI 96
+A+REL+EELG+
Sbjct: 84 EEAARRELREELGL 97
>gi|188534366|ref|YP_001908163.1| isopentenyl-diphosphate delta-isomerase [Erwinia tasmaniensis
Et1/99]
gi|188029408|emb|CAO97285.1| Isopentenyl-diphosphate delta-isomerase [Erwinia tasmaniensis
Et1/99]
Length = 181
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S +LLLQ+RA K G+W ++ GH +S+ +AQR
Sbjct: 23 EVHEKGLLHRAVTIYVF-NSQHQLLLQQRARGKYHCGGLWSNTTCGHPYPQESTADAAQR 81
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNP 136
L+EE+G++L + FE + N + + ++ + FA + T+NP
Sbjct: 82 RLREEMGLDLRLQPVFELSYNLPLSNGLTEHEYGHVYFAISDALPTVNP 130
>gi|313205665|ref|YP_004044842.1| isopentenyl-diphosphate delta-isomerase [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|383484985|ref|YP_005393897.1| isopentenyl-diphosphate delta-isomerase [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|386322350|ref|YP_006018512.1| Isopentenyldiphosphate isomerase [Riemerella anatipestifer RA-GD]
gi|416111531|ref|ZP_11592693.1| Putative Nudix hydrolase YfcD [Riemerella anatipestifer RA-YM]
gi|442315162|ref|YP_007356465.1| hypothetical protein G148_1467 [Riemerella anatipestifer RA-CH-2]
gi|312444981|gb|ADQ81336.1| isopentenyl-diphosphate delta-isomerase, type 1 [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315022603|gb|EFT35629.1| Putative Nudix hydrolase YfcD [Riemerella anatipestifer RA-YM]
gi|325336893|gb|ADZ13167.1| Isopentenyldiphosphate isomerase [Riemerella anatipestifer RA-GD]
gi|380459670|gb|AFD55354.1| isopentenyl-diphosphate delta-isomerase, type 1 [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|441484085|gb|AGC40771.1| hypothetical protein G148_1467 [Riemerella anatipestifer RA-CH-2]
Length = 171
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 28/188 (14%)
Query: 19 QKTGITKPRSEV---------HRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD 69
+K + P+ EV HR G HR + ++F + E+LLQRRAD K P +W
Sbjct: 3 EKVVLVNPKDEVLGVMEKLQAHRSGFLHRAFSVFLF-NAKGEMLLQRRADAKYHSPKLWT 61
Query: 70 ISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 129
+ H G+S AQR L EELGI+ D E F+F+ + + D + +
Sbjct: 62 NAVCSHPRLGESYKAGAQRRLIEELGID--ADISE-KFSFIYKAEVGDNLWEHE------ 112
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQ 189
L I F L EVS ++YI+ E L + F + F II +
Sbjct: 113 LDYVFTGIYEGDFNLNPEEVSEIRYISMEALDKELEANPEQFTEW---------FKIILK 163
Query: 190 RYKENTME 197
YK+ ++
Sbjct: 164 EYKQKMLK 171
>gi|187735621|ref|YP_001877733.1| dimethyladenosine transferase [Akkermansia muciniphila ATCC
BAA-835]
gi|187425673|gb|ACD04952.1| dimethyladenosine transferase [Akkermansia muciniphila ATCC
BAA-835]
Length = 459
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E D++ Q TG R E+H HR V+ ++ + +LLQ+R+ +KD PG
Sbjct: 282 DELFDIVDELNQVTG-QGTRREIHEGSLRHRAVHMFLVNKHGA-VLLQKRSLWKDRQPGK 339
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGIN 97
WD S+AGH+ AG+S +A REL+EELG++
Sbjct: 340 WDSSAAGHLDAGESYEEAAVRELKEELGVS 369
>gi|404477157|ref|YP_006708588.1| nudix hydrolase [Brachyspira pilosicoli B2904]
gi|404438646|gb|AFR71840.1| nudix hydrolase [Brachyspira pilosicoli B2904]
Length = 164
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
GDYH ++AW+ E++L +R K+ P MW+ + G I AG+SS+ A REL+EE
Sbjct: 28 GDYHIVIHAWV-VNGNDEVILTKRHSSKNICPNMWECTE-GSIVAGESSVDGAVRELKEE 85
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
+G++ D F+ +F+ +N D Y+ + + LQ+ EVS K
Sbjct: 86 IGLSFKVDEATFLTSFVLD--------FSNTIIDSYVFK--RDVDINDLILQENEVSDAK 135
Query: 154 YIAYEEYKNL 163
+ + Y+ +
Sbjct: 136 IVDEKVYREM 145
>gi|228995334|ref|ZP_04155021.1| hypothetical protein bpmyx0001_59380 [Bacillus pseudomycoides DSM
12442]
gi|228764417|gb|EEM13278.1| hypothetical protein bpmyx0001_59380 [Bacillus pseudomycoides DSM
12442]
Length = 160
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV KT T R VG+YH V+ WI + + LL +R D P +W
Sbjct: 2 EVWDVYDKNRNKTNKTHVRGTPLAVGNYHIVVHVWIRNKKGEILLTKRHPD--KPHPNLW 59
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ G I G++SL A RE++EE+GINL + + + + + + + N+F DV
Sbjct: 60 E-CPGGSILVGENSLDGAVREVKEEIGINLSRSNGKLIES--------ERRDVYNDFYDV 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
+L + LQ+ EVS +K++ E +++
Sbjct: 111 WLFN--QSFEITETILQKDEVSDIKWVTKSELESM 143
>gi|299140814|ref|ZP_07033952.1| NTP pyrophosphohydrolase [Prevotella oris C735]
gi|298577780|gb|EFI49648.1| NTP pyrophosphohydrolase [Prevotella oris C735]
Length = 169
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 23/151 (15%)
Query: 27 RSEVHRVG-DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
R E H H V+ +F S EL LQ+R D+KD P WD + GHI+ G++ I+
Sbjct: 24 RKEAHNGSKQLHPVVHLHVF-NSKGELYLQKRPDWKDIQPSKWDTACGGHIAIGENVEIA 82
Query: 86 AQRELQEELGIN--LPKDAFEFVFTFLQQNVINDGKFINNEFADVYL-VTTLNPIPLEAF 142
+RE+QEELGI +PK ++VF N E +Y+ TT N +
Sbjct: 83 LKREVQEELGITDYIPKRIGQYVFE------------SNCEKELIYVHKTTYNKV----L 126
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKD--DPSF 171
Q E++ ++ EE K+ L K+ P+F
Sbjct: 127 HPNQEELNGGRFWTSEEIKSNLGKNIFTPNF 157
>gi|291086200|ref|ZP_06355093.2| isopentenyl-diphosphate delta-isomerase [Citrobacter youngae ATCC
29220]
gi|291068517|gb|EFE06626.1| isopentenyl-diphosphate delta-isomerase [Citrobacter youngae ATCC
29220]
Length = 188
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++EH+ +L GQ GI + + H + WIF + Q LL+ RR+ K +WP
Sbjct: 5 MRQEHVILLNEQGQPCGILEKYAAHTAATPLHSAFSCWIFNDQGQ-LLVTRRSLHKKAWP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH +G+++ + R + ELG ++ A V+ + + + NE
Sbjct: 64 GVWTNSVCGHPQSGETAEDAVIRRARFELGADITAPA--SVYADFRYCATDPNGIVENEV 121
Query: 126 ADVY---LVTTLNPIPLEAFTLQQTEVSAV 152
VY LV+ L P E Q + + V
Sbjct: 122 CPVYAAQLVSQLQPNADEVMDYQWSNLEGV 151
>gi|326336605|ref|ZP_08202774.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325691270|gb|EGD33240.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 171
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ E H G HR + ++F S +E+LLQ+RA K PG+W + H G++++ +
Sbjct: 20 KMEAHEKGLLHRAFSVFVF-NSKKEILLQQRAFSKYHSPGLWTNTCCSHPREGETNIQAG 78
Query: 87 QRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
+R L EE+G+ +P K+ F F++ N + + ++ D LV + IP+ +
Sbjct: 79 ERRLWEEMGLRIPLKELFSFIYKADFDNGLTEHEY------DYVLVGCSDDIPV----VN 128
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
EV++ K++ E K +A+ + +
Sbjct: 129 PKEVASWKWLPLEAIKEGIAQSPQQYTAW 157
>gi|312131547|ref|YP_003998887.1| isopentenyl-diphosphate delta-isomerase [Leadbetterella byssophila
DSM 17132]
gi|311908093|gb|ADQ18534.1| isopentenyl-diphosphate delta-isomerase, type 1 [Leadbetterella
byssophila DSM 17132]
Length = 168
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ EVHR G H + IF E E+L+ +RAD K G+W + GH +S + +A
Sbjct: 17 KMEVHRKGLLHLAFSVLIFNEEG-EMLIHKRADEKYHSAGLWTNACCGHPYPEESLIQAA 75
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQ 146
+R L+EE+G K F F Q V+ +G I NE V+ V T N + +
Sbjct: 76 ERRLEEEMGF---KCELSPAFQFTYQTVLENG-LIENEVDQVF-VGTFNGL----ISPDP 126
Query: 147 TEVSAVKYIAYEEYKNLLAKDDPS 170
TEVSA K+I + + KD+P+
Sbjct: 127 TEVSAYKWIPLDALLEQV-KDEPN 149
>gi|389810792|ref|ZP_10206008.1| isopentenyl-diphosphate delta-isomerase [Rhodanobacter thiooxydans
LCS2]
gi|388440558|gb|EIL96924.1| isopentenyl-diphosphate delta-isomerase [Rhodanobacter thiooxydans
LCS2]
Length = 195
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G HR + +IF ELLLQ+R+ K WPG W S H G+S + +R LQ+E
Sbjct: 41 GQRHRAFSLFIF-NGHGELLLQQRSSGKRLWPGYWANSCCSHPRQGESMEQATERRLQQE 99
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LG+ P ++F F Q G +E VY T P+ A TEV A +
Sbjct: 100 LGMRCP---LRYLFKFEYQADYR-GLGAEHELCWVYAGTCTQPVRANA-----TEVEAWR 150
Query: 154 YIAYEEYKNLLAKDDPSFVPY 174
++A +A+ F P+
Sbjct: 151 FVAPAALDREIARYPEHFTPW 171
>gi|296126773|ref|YP_003634025.1| NUDIX hydrolase [Brachyspira murdochii DSM 12563]
gi|445062740|ref|ZP_21375075.1| NUDIX hydrolase [Brachyspira hampsonii 30599]
gi|296018589|gb|ADG71826.1| NUDIX hydrolase [Brachyspira murdochii DSM 12563]
gi|444505875|gb|ELV06302.1| NUDIX hydrolase [Brachyspira hampsonii 30599]
Length = 166
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV QKTG R R +YH ++AW+ S E+++ +R K P W
Sbjct: 3 EIWDVYNRNKQKTGRIHQRGLPLRKNEYHIVIHAWV-VNSNDEVIMTKRHKSKKICPNKW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G I G+SS+ A RE++EE+G++ K+ F+ +F+ + + D
Sbjct: 62 ECTE-GSILTGESSIEGAIREIKEEIGLSFEKEEGIFLTSFILER--------SKTIIDA 112
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
++ + LE LQ+ EVS + E+Y
Sbjct: 113 FMFR--RDVKLENLILQENEVSEAMIVDREKY 142
>gi|298209290|ref|YP_003717469.1| isopentenyl-diphosphate delta-isomerase [Croceibacter atlanticus
HTCC2559]
gi|83849217|gb|EAP87086.1| putative isopentenyl-diphosphate delta-isomerase [Croceibacter
atlanticus HTCC2559]
Length = 174
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 22/189 (11%)
Query: 4 SVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDS 63
S ++EE + ++ ++ G+ + E H HR + ++F ++ EL+LQ+RA K
Sbjct: 2 SKIKEEQVILVNQNDEQIGLM-AKMEAHEKALLHRAFSVFVFNKNG-ELMLQQRALHKYH 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFIN 122
PG+W + H G++++ + +R LQEE+G + K++ F++ +N + + ++
Sbjct: 60 TPGLWTNTCCSHQREGETNIAAGKRRLQEEMGFSTDLKESISFIYKAPFENGLTEHEY-- 117
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQ 182
D L+ N P + EV+A K+ + E+ K + K++P+ Y
Sbjct: 118 ----DHILIGEFNDKP----NINPDEVAAWKWASLEDIKTDM-KENPNL--------YTA 160
Query: 183 LFNIISQRY 191
F II +Y
Sbjct: 161 WFKIIFDKY 169
>gi|116333091|ref|YP_794618.1| NUDIX family hydrolase [Lactobacillus brevis ATCC 367]
gi|116098438|gb|ABJ63587.1| NUDIX family hydrolase [Lactobacillus brevis ATCC 367]
Length = 172
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
EH D+ Q+ G + R E G++H VNA+IF + LL QR AD K ++P W
Sbjct: 8 EHWDIYNHQFQRIG-DRQRHETLASGEFHLVVNAFIFNTAGSVLLQQRVAD-KINFPNYW 65
Query: 69 DISSAGHISAGDSSLISAQRELQEELG 95
D S+ G + AG++ QREL EELG
Sbjct: 66 DCSAGGSVLAGETIEAGMQRELAEELG 92
>gi|266624633|ref|ZP_06117568.1| MutT/NUDIX family protein [Clostridium hathewayi DSM 13479]
gi|288863496|gb|EFC95794.1| MutT/NUDIX family protein [Clostridium hathewayi DSM 13479]
Length = 158
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E D+ G KTG T R G YH V+ WI + LL QR D +P
Sbjct: 2 KEVWDLYDAKGNKTGYTLVRGRPIPEGCYHLVVSVWIINNRGEYLLSQRHPD--KPYPLR 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINL-PKDAFEFVFTFLQQNVINDGKFINNEFA 126
W+ + G + +G+ SL A RE+ EELGI L PKD Q + + +
Sbjct: 60 WE-CTGGAVLSGEDSLGGALREVNEELGIILNPKDG---------QRISRICREQTRDLY 109
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
DV++ + + TLQ+TEV VK++ EE
Sbjct: 110 DVWVF--YKDVDISDITLQETEVVDVKWVTDEE 140
>gi|352080711|ref|ZP_08951650.1| isopentenyl-diphosphate delta-isomerase, type 1 [Rhodanobacter sp.
2APBS1]
gi|389797467|ref|ZP_10200508.1| isopentenyl-diphosphate delta-isomerase [Rhodanobacter sp. 116-2]
gi|351683992|gb|EHA67068.1| isopentenyl-diphosphate delta-isomerase, type 1 [Rhodanobacter sp.
2APBS1]
gi|388447099|gb|EIM03112.1| isopentenyl-diphosphate delta-isomerase [Rhodanobacter sp. 116-2]
Length = 195
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G HR + +IF ELLLQ+R+ K WPG W S H G+S + +R LQ+E
Sbjct: 41 GQRHRAFSLFIF-NGHGELLLQQRSRSKRLWPGYWANSCCSHPRQGESMEQATERRLQQE 99
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LG+ P ++F F Q D +E VY T P+ A TEV A +
Sbjct: 100 LGMRCP---LRYLFKFEYQADYRDLG-AEHELCWVYAGTCTQPVRANA-----TEVEAWR 150
Query: 154 YIAYEEYKNLLAKDDPSFVPY 174
++A +A+ F P+
Sbjct: 151 FVAPAALDREIARCPERFTPW 171
>gi|312138399|ref|YP_004005735.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi 103S]
gi|311887738|emb|CBH47050.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi 103S]
Length = 197
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EH+ +L G+ G T+P++ VH H ++++F + LL+ RRA K +WPG+
Sbjct: 2 EHVVLLDEAGRAVG-TEPKATVHTTATPLHLAFSSYVF-DRHGRLLMTRRALDKATWPGV 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + GH + G+ + +R L ELGI+ + V + + D + NE
Sbjct: 60 WTNTCCGHPALGEPLREAVRRRLHHELGID--SSEVDLVLPDFRYRAVMDSGVVENEICP 117
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
V+ V P P+ ++ EV V ++ + +
Sbjct: 118 VFRVRYDGPPPVP----RRGEVDDVDWVDWSTF 146
>gi|374384454|ref|ZP_09641974.1| isopentenyl-diphosphate delta-isomerase [Odoribacter laneus YIT
12061]
gi|373228362|gb|EHP50671.1| isopentenyl-diphosphate delta-isomerase [Odoribacter laneus YIT
12061]
Length = 175
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
M +S+V + ++ + + TG + + E HR G HR ++ ++F Q LLQRR+
Sbjct: 1 MEKSIVDTSQVVLVDLNDRPTGYME-KQEAHRQGLLHRAISVFLFNTEGQ-WLLQRRSFT 58
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118
K G+W + H G+S +AQR ++EELG++ P E F FL + ++ G
Sbjct: 59 KYHSAGLWSNACCTHPYPGESPERAAQRRIKEELGLSCP---LEKQFCFLYKTALDHG 113
>gi|152967934|ref|YP_001363718.1| isopentenyl-diphosphate delta-isomerase [Kineococcus radiotolerans
SRS30216]
gi|151362451|gb|ABS05454.1| isopentenyl-diphosphate delta-isomerase, type 1 [Kineococcus
radiotolerans SRS30216]
Length = 186
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 13 VLTMTGQKTGITKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
+LT G G T P+S VH R H + WI ++ + LL RRA K +WPG+W S
Sbjct: 20 LLTEDGTPCG-TAPKSGVHHRTTPLHLAFSCWILDDAGRTLL-TRRAASKRTWPGVWTNS 77
Query: 72 SAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV 131
GH G+ + R +ELG+ + D + +F + V++DG + NE V+
Sbjct: 78 FCGHPGPGEEPADAVLRRSVQELGVQV-GDVSPLLPSFRYRAVMDDGT-VENEVCPVF-- 133
Query: 132 TTLNPIPLEA-FTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
T P E EV A +++ ++ +A D F P+
Sbjct: 134 -TARIAPGEGELAPDPAEVDAFRWVHLDDLAAQVAADPSPFSPW 176
>gi|157370441|ref|YP_001478430.1| isopentenyl-diphosphate delta-isomerase, type 1 [Serratia
proteamaculans 568]
gi|172047668|sp|A8GDW2.1|IDI_SERP5 RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|157322205|gb|ABV41302.1| isopentenyl-diphosphate delta-isomerase, type 1 [Serratia
proteamaculans 568]
Length = 179
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
++ ++ VH+ G HR + +IF +S LLLQ+RA K G+W S GH G+S+L
Sbjct: 17 SQSKTRVHQQGLLHRAFSIFIF-DSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTL 75
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
+AQR LQEE+G + + V +F Q + G I +EF +Y+
Sbjct: 76 AAAQRRLQEEMGFSAE---LQQVSSFTYQAAV-PGDLIEHEFDHIYV 118
>gi|325674605|ref|ZP_08154292.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi ATCC
33707]
gi|325554191|gb|EGD23866.1| isopentenyl-diphosphate delta-isomerase [Rhodococcus equi ATCC
33707]
Length = 197
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EH+ +L G+ G T+P++ VH H ++++F + LL+ RRA K +WPG+
Sbjct: 2 EHVVLLDEAGRAVG-TEPKATVHTTATPLHLAFSSYVF-DRHGRLLMTRRALDKATWPGV 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + GH + G+ + +R L ELGI+ + V + + D + NE
Sbjct: 60 WTNTCCGHPALGEPLREAVRRRLHHELGID--SSEVDLVLPDFRYRAVMDSGVVENEICP 117
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
V+ V P P+ ++ EV V ++ + +
Sbjct: 118 VFRVRYDGPPPVP----RRGEVDDVDWVDWSTF 146
>gi|374724573|gb|EHR76653.1| geranylgeranyl diphosphate synthase, type I [uncultured marine
group II euryarchaeote]
Length = 585
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 39/211 (18%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHR-VGDYHRTVNAWIFAESTQELLLQRRAD 59
MAE+++ + D + G K HR G YHR + +F ++ + LLLQRRA
Sbjct: 35 MAEAIILTDEWDQVIGPGSKIA-------AHRGTGAYHRAFSVLLF-DNQKRLLLQRRAS 86
Query: 60 FKDSWPGMWDISSAGHISAGD---------SSLISAQRELQEELGI---NLPKDAFEFVF 107
K ++PG+W S H D S +A R+L++ELGI +P D+F F+
Sbjct: 87 DKVTFPGVWANSCCSHPLHCDEEMEEADAIGSKRAAVRKLEQELGIAPGQVPLDSFHFIT 146
Query: 108 TFLQQNVINDGKFINNEFADVYLVTT---LNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
+ +N+ + E + ++ L+P P E+S +K+++ EE + LL
Sbjct: 147 KMRYSSRMNE-TWTEREIDHILVIQADVDLDPNP--------NEISEIKWVSEEELEALL 197
Query: 165 AKDDPSFVPYDVNGGYGQLFNIISQRYKENT 195
++ + G F I+ R + T
Sbjct: 198 IDEEQT------EGVIAPWFRCIAARVMDET 222
>gi|144600714|gb|ABP01600.1| isopentenyl diphosphate isomerase [Adonis aestivalis var.
palaestina]
Length = 250
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 19/154 (12%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------I 84
G HR + ++F T +LLLQ+RA+ K ++P MW + H A +
Sbjct: 49 GLLHRAFSCFLFDPITGKLLLQKRAEEKITFPNMWTNTCCSHPLAIKGEVEEAEQIGVRR 108
Query: 85 SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
+AQR+L+ ELGI+ +P D +++ T + +DG + +E + +T P+ L
Sbjct: 109 AAQRKLEHELGISTDQVPLDDLQYL-TRIHYLAPSDGMWGEHEIDYILFLTA--PVTL-- 163
Query: 142 FTLQQTEVSAVKYIAYEEYKNLLAKDDP-SFVPY 174
+ EVS VK+++ EE + L+ + DP SF P+
Sbjct: 164 -NVNPNEVSDVKWVSPEELRALMEELDPESFTPW 196
>gi|218511225|ref|YP_002415683.1| putative Isopentenyl-diphosphate delta-isomerase (IPP isomerase)
(Isopentenyl pyrophosphate isomerase) (IPP:DMAPP
isomerase) [Escherichia coli 55989]
gi|386283092|ref|ZP_10060726.1| isopentenyl-diphosphate delta-isomerase [Escherichia sp. 4_1_40B]
gi|410503239|ref|YP_006940476.1| isopentenyl-diphosphate delta-isomerase, NUDIX family [Escherichia
coli]
gi|417808245|ref|ZP_12455152.1| putative Isopentenyl-diphosphate delta-isomerase (IPP isomerase)
(Isopentenyl pyrophosphate isomerase) (IPP:DMAPP
isomerase) [Escherichia coli O104:H4 str. LB226692]
gi|417868367|ref|ZP_12513396.1| hypothetical protein C22711_5290 [Escherichia coli O104:H4 str.
C227-11]
gi|419408167|ref|ZP_13948854.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC15D]
gi|419411806|ref|ZP_13952470.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC15E]
gi|422992338|ref|ZP_16983104.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. C227-11]
gi|422997469|ref|ZP_16988228.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. C236-11]
gi|423002440|ref|ZP_16993189.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 09-7901]
gi|423007581|ref|ZP_16998321.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 04-8351]
gi|423012788|ref|ZP_17003514.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-3677]
gi|423024107|ref|ZP_17014807.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4404]
gi|423029227|ref|ZP_17019918.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4522]
gi|423034378|ref|ZP_17025060.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4623]
gi|423039509|ref|ZP_17030181.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423044631|ref|ZP_17035295.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423049715|ref|ZP_17040369.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423056715|ref|ZP_17045518.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423061868|ref|ZP_17050661.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|429775871|ref|ZP_19307859.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02030]
gi|429781052|ref|ZP_19312986.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429785206|ref|ZP_19317106.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02092]
gi|429790659|ref|ZP_19322520.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02093]
gi|429796651|ref|ZP_19328464.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02281]
gi|429802437|ref|ZP_19334201.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02318]
gi|429806544|ref|ZP_19338276.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02913]
gi|429811933|ref|ZP_19343621.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-03439]
gi|429817041|ref|ZP_19348685.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-04080]
gi|429822251|ref|ZP_19353852.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-03943]
gi|429907926|ref|ZP_19373892.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429912977|ref|ZP_19378932.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-9941]
gi|429918121|ref|ZP_19384060.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429923151|ref|ZP_19389070.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429928193|ref|ZP_19394098.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429933203|ref|ZP_19399096.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429938328|ref|ZP_19404205.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429943468|ref|ZP_19409334.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429948609|ref|ZP_19414460.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429953615|ref|ZP_19419456.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958819|ref|ZP_19424646.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec12-0466]
gi|432690081|ref|ZP_19925332.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli KTE161]
gi|218359326|emb|CAU95816.1| putative Isopentenyl-diphosphate delta-isomerase (IPP isomerase)
(Isopentenyl pyrophosphate isomerase) (IPP:DMAPP
isomerase) [Escherichia coli 55989]
gi|340737176|gb|EGR71450.1| putative Isopentenyl-diphosphate delta-isomerase (IPP isomerase)
(Isopentenyl pyrophosphate isomerase) (IPP:DMAPP
isomerase) [Escherichia coli O104:H4 str. LB226692]
gi|341921656|gb|EGT71254.1| hypothetical protein C22711_5290 [Escherichia coli O104:H4 str.
C227-11]
gi|353234010|emb|CCE21259.1| isopentenyl-diphosphate delta-isomerase, NUDIX family [Escherichia
coli]
gi|354855756|gb|EHF16230.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. C236-11]
gi|354855834|gb|EHF16307.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. C227-11]
gi|354855853|gb|EHF16325.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 04-8351]
gi|354868530|gb|EHF28945.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 09-7901]
gi|354872340|gb|EHF32733.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-3677]
gi|354872659|gb|EHF33044.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4404]
gi|354878666|gb|EHF39014.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4522]
gi|354885361|gb|EHF45660.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4623]
gi|354891914|gb|EHF52131.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354895618|gb|EHF55799.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354903100|gb|EHF63210.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354908559|gb|EHF68610.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354910565|gb|EHF70584.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|378253545|gb|EHY13419.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC15D]
gi|378260528|gb|EHY20332.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC15E]
gi|386119773|gb|EIG68416.1| isopentenyl-diphosphate delta-isomerase [Escherichia sp. 4_1_40B]
gi|429348448|gb|EKY85215.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429348514|gb|EKY85278.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02030]
gi|429349166|gb|EKY85916.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02092]
gi|429363459|gb|EKZ00097.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02093]
gi|429363682|gb|EKZ00310.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02281]
gi|429366193|gb|EKZ02799.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02318]
gi|429377772|gb|EKZ14288.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-02913]
gi|429380223|gb|EKZ16717.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-03439]
gi|429381713|gb|EKZ18193.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-03943]
gi|429393586|gb|EKZ29978.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 11-04080]
gi|429396004|gb|EKZ32361.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429408106|gb|EKZ44351.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429411028|gb|EKZ47242.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429415204|gb|EKZ51372.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429420545|gb|EKZ56671.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429428905|gb|EKZ64979.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429430744|gb|EKZ66801.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429437644|gb|EKZ73644.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429441301|gb|EKZ77273.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429446186|gb|EKZ82122.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec12-0466]
gi|429453111|gb|EKZ88982.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. Ec11-9941]
gi|431231791|gb|ELF27473.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli KTE161]
Length = 179
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 3 ESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD 62
E+V+ +H D +TGI + + H+ G HR V+ +I S +LLLQ+RA K
Sbjct: 2 ENVILIDHNDC------ETGIAE-KLYTHKKGILHRAVSVYI-CNSDGKLLLQQRALGKY 53
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN 122
PG+W +S H G+S+L +A R L+EE+GI P ++ NV G
Sbjct: 54 HSPGLWSNTSCTHPFPGESNLSAANRRLREEMGIECPLSKLLKIY----YNVYVGGDLTE 109
Query: 123 NEFADV-YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
+E A + Y ++ P L E + KY++ E + + ++ +F
Sbjct: 110 HEIAHIFYGISDDEP------DLNSLEAMSYKYVSLTELSSEIKFNNDAF 153
>gi|402830500|ref|ZP_10879201.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga sp. CM59]
gi|402285231|gb|EJU33721.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga sp. CM59]
Length = 172
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ E H G HR + +IF S QE+LLQ+RA K P +W + H AG+++ +
Sbjct: 20 KMEAHEKGLLHRAFSVFIF-NSKQEVLLQQRAACKYHSPNLWTNTCCSHPRAGETNQQAG 78
Query: 87 QRELQEELGINLP-KDAFEFVF 107
+R LQEE+G+ +P ++ F F++
Sbjct: 79 ERRLQEEMGLQVPLREVFSFIY 100
>gi|428218494|ref|YP_007102959.1| isopentenyl-diphosphate delta-isomerase [Pseudanabaena sp. PCC
7367]
gi|427990276|gb|AFY70531.1| isopentenyl-diphosphate delta-isomerase [Pseudanabaena sp. PCC
7367]
Length = 176
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
M E+V+ + D T +K HR G HR + ++ Q LLLQRRA
Sbjct: 1 MKETVILVDRQDQPIGTAEKMA-------AHRQGSLHRAFSIFVLNAQDQ-LLLQRRAAH 52
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
K G+W + H G+++ +AQR LQEE+G + D E +F+F+ Q ++ G
Sbjct: 53 KYHSGGLWTNTCCSHPRPGETTPAAAQRRLQEEMGFSC--DLRE-IFSFVYQAQLDRG-L 108
Query: 121 INNEFADVYL-----VTTLNPIPLEAF 142
I EF V+L V LNP +A+
Sbjct: 109 IEYEFDHVFLGRFDGVPQLNPEEADAY 135
>gi|403384020|ref|ZP_10926077.1| hypothetical protein KJC30_04939 [Kurthia sp. JC30]
Length = 193
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84
R +H G +H T + W+ E + LQ R+ K +P +DI++AGH+ A + ++
Sbjct: 19 RDNIHAKGLWHETFHCWLTGTKKGERIVYLQLRSAMKKDYPSRYDITAAGHLLATE-TVA 77
Query: 85 SAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
RE+ EE+G+ L + T NV+ + + E+A ++ IP FTL
Sbjct: 78 DGVREIAEEIGLTLSIHDLRPIGTI--PNVVKTSRIHDREWARCFVYDVGETIP--TFTL 133
Query: 145 QQTEVSAVKYIAYEEYKNLLAKD 167
Q+ EV + +++ +A D
Sbjct: 134 QREEVETIVTCTLADFRACIAHD 156
>gi|15613549|ref|NP_241852.1| hypothetical protein BH0986 [Bacillus halodurans C-125]
gi|10173601|dbj|BAB04705.1| BH0986 [Bacillus halodurans C-125]
Length = 208
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDS 63
++ E L + G G+ R EVH G +H T + W + T L LQ R++ K
Sbjct: 1 MESERLKIFDEDGNPIGVA-TREEVHARGLWHETFHCWFMTKEDDTHYLYLQIRSELKKD 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF-LQQNVINDGKFIN 122
+P + DI+ AGH+ A + ++ RE+ EE GI + +FE + + + + K I+
Sbjct: 60 YPNLLDITVAGHLLA-NETVQDGVREVYEETGIAV---SFEVLKPLGIMKYSVTREKLID 115
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
E A V+L + I F LQ+ EV+ + + + ++ ++ V
Sbjct: 116 QERAHVFLYQ--DGITFTDFRLQREEVAGMVRVRFADFYMFCLREKEEVV 163
>gi|393785118|ref|ZP_10373272.1| hypothetical protein HMPREF1071_04140 [Bacteroides salyersiae
CL02T12C01]
gi|392663139|gb|EIY56691.1| hypothetical protein HMPREF1071_04140 [Bacteroides salyersiae
CL02T12C01]
Length = 173
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 27 RSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
R E H H ++ +F S EL LQ+R D+KD PG WD S GHI G+S I+
Sbjct: 25 RGECHNGSKLLHPVIHLHVF-NSKGELYLQKRPDWKDIQPGKWDTSVGGHIDLGESVDIA 83
Query: 86 AQRELQEELGIN--LPKDAFEFVF 107
+RE QEELGI +P+ ++F
Sbjct: 84 LRRETQEELGITDFMPEKLTSYIF 107
>gi|403058009|ref|YP_006646226.1| isopentenyl-diphosphate delta-isomerase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805335|gb|AFR02973.1| putative isopentenyl-diphosphate delta-isomerase [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 179
Score = 60.8 bits (146), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG+ + + E H G HR + ++F S Q+LLLQ+RA+ K G+W + H + G+
Sbjct: 16 TGVME-KQEAHVKGALHRAITVYVF-NSHQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGE 73
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+L +A R L EE+G+ + A +FT + +++G I +E VY T + +P
Sbjct: 74 ETLQAAHRRLYEEMGL---RCALTPMFTLTYRLPLDNG-LIEHELGHVYFGVT-DDVP-- 126
Query: 141 AFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ EVS+ Y + +E +A F +
Sbjct: 127 --QMNPDEVSSYAYQSIDEIAQQMATTPEQFTAW 158
>gi|320580920|gb|EFW95142.1| Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP
isomerase) [Ogataea parapolymorpha DL-1]
Length = 272
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 31/173 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG--------DSSLI- 84
G HR + ++F +S LLLQ+RAD K ++P MW + H DSS++
Sbjct: 93 GLLHRAFSVFLF-DSNNRLLLQQRADEKITFPSMWTNTCCSHPLCVRSELGLDLDSSILG 151
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L++ELGI ++P + F+F+ T + ++G + +E D L+ NP
Sbjct: 152 AKTAAQRKLEQELGIHPKDVPIENFKFL-TRIHYMAPSNGPWGEHEI-DYILIIKANP-- 207
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRY 191
AF EV +Y+ +E K + DPS V + F +I + Y
Sbjct: 208 --AFKANPNEVKDTRYVTADELKKMFK--DPSLV-------FTPWFKLICESY 249
>gi|255035799|ref|YP_003086420.1| isopentenyl-diphosphate delta-isomerase [Dyadobacter fermentans DSM
18053]
gi|254948555|gb|ACT93255.1| isopentenyl-diphosphate delta-isomerase, type 1 [Dyadobacter
fermentans DSM 18053]
Length = 171
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
P+ E H G HR + +IF S E+LLQRRA K G+W + H G++
Sbjct: 19 PKLEAHEKGVLHRAFSVFIF-NSNSEMLLQRRAFGKYHSEGLWSNTCCSHPLPGEAVHDG 77
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A R L+EE+GI+ EF++TF + + +G NE V+ + + +P +
Sbjct: 78 AVRRLREEMGIHAD---LEFLYTFQYRADLENG-LTENELDHVFYGVS-DAVP----AID 128
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYK 192
E S KY+ +E + +A++ S+ + + +I++R K
Sbjct: 129 PAEASEYKYLTMDEIQADIAQNPHSYTEW-----FKICMPVIARRMK 170
>gi|237709665|ref|ZP_04540146.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754297|ref|ZP_06089486.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423241664|ref|ZP_17222776.1| hypothetical protein HMPREF1065_03399 [Bacteroides dorei
CL03T12C01]
gi|229456301|gb|EEO62022.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263235006|gb|EEZ20561.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392640691|gb|EIY34484.1| hypothetical protein HMPREF1065_03399 [Bacteroides dorei
CL03T12C01]
Length = 166
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
+EE ++ G TG R E H H V+ +F S EL LQRR D+KD P
Sbjct: 6 KEEMFPIVDEQGNITGAAT-RGECHNGSKLLHPVVHLHVF-NSKGELYLQRRPDWKDIQP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGI 96
G WD + GHI G+S + +RE++EELGI
Sbjct: 64 GKWDTAVGGHIDLGESVETALKREVKEELGI 94
>gi|398905865|ref|ZP_10653159.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudomonas sp.
GM50]
gi|398173978|gb|EJM61790.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudomonas sp.
GM50]
Length = 187
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE L ++ +K G P+ + H+ G HR + +IF ++ + LLLQ+RA K G+
Sbjct: 2 EELLILVDQHDRKKGFA-PKLQAHQQGLLHRAFSIFIFDQAGR-LLLQQRAFGKYHSQGL 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + GH G+ ++ +A+R LQEE+G+ P V T L + +++ + I EF
Sbjct: 60 WTNTCCGHPRPGERTMAAAKRRLQEEMGMTCP---LRKVSTLLYREQVSN-QLIEYEFDH 115
Query: 128 VYL-VTTLNPI--PLEAFTLQQTEVSAV 152
+++ ++ +P+ P EA Q ++S +
Sbjct: 116 LFVGISHCDPVANPEEAHAWQWLQLSQI 143
>gi|256379301|ref|YP_003102961.1| isopentenyl-diphosphate delta-isomerase [Actinosynnema mirum DSM
43827]
gi|255923604|gb|ACU39115.1| isopentenyl-diphosphate delta-isomerase, type 1 [Actinosynnema
mirum DSM 43827]
Length = 190
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E + +L TG G + H H ++++F + LLL RRA K +WPG+W
Sbjct: 2 ERVVLLDETGAAVGEADKATVHHEETPLHLAFSSYLF-DRGGRLLLSRRALHKKTWPGVW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S GH + G+ +R L EELG LP + V + + D + NE V
Sbjct: 61 TNSCCGHPAPGEDLEAGVRRRLAEELG--LPDVGLDLVLPGFRYRAVMDNGVVENEMCPV 118
Query: 129 YL-VTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
Y V P P EV V+++ + ++
Sbjct: 119 YRGVIDTEPAP------NPDEVDDVEWVPWADF 145
>gi|153207695|ref|ZP_01946342.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii 'MSU Goat Q177']
gi|212218972|ref|YP_002305759.1| diphosphomevalonate decarboxylase [Coxiella burnetii CbuK_Q154]
gi|120576391|gb|EAX33015.1| diphosphomevalonate decarboxylase/isopentenyl-diphosphate
delta-isomerase [Coxiella burnetii 'MSU Goat Q177']
gi|212013234|gb|ACJ20614.1| diphosphomevalonate decarboxylase [Coxiella burnetii CbuK_Q154]
Length = 503
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQE--LLLQRRADFKDSW 64
+E+ + ++ ++ GI + + + HR G HR + +IF+ E LLLQ+R K
Sbjct: 331 REQRVVLVDENDRRLGIEE-KIKAHREGKLHRAFSVFIFSRKNNEWQLLLQQRHPEKYHS 389
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINN 123
+W + H + + + +R L EE G+ +P K EF +T N + I N
Sbjct: 390 GRLWTNTCCSHPRPDEDIVTAGERRLFEETGLKIPLKRVGEFHYTATVGN-----QLIEN 444
Query: 124 EFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+ V + T +A + E+SAV++I E KN L ++ F P+
Sbjct: 445 EYDHVLIGFT----DADAIDFNKKEISAVRWIRVSELKNELKENPSHFTPW 491
>gi|194015922|ref|ZP_03054537.1| conserved hypothetical protein [Bacillus pumilus ATCC 7061]
gi|194012277|gb|EDW21844.1| conserved hypothetical protein [Bacillus pumilus ATCC 7061]
Length = 208
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAES--TQELLLQRRADFKDS 63
+++E L++L + G+ RS++H G +H T + W+ + T L Q R+ K +
Sbjct: 1 MEQEKLNILNEQHETIGVA-ARSDIHAQGLWHETFHFWLLKKEHDTIYLYFQLRSPAKKN 59
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINN 123
+P ++DI++AGH+ A + RE++EELG+ +P + + F + Q+ I+ F +
Sbjct: 60 FPSLFDITAAGHLLANEQP-SDGVREVEEELGLTVPFE--DLAFAGVIQDEIHLPSFTDR 116
Query: 124 EFADVYL 130
E VYL
Sbjct: 117 ECCHVYL 123
>gi|406836755|ref|ZP_11096349.1| NUDIX hydrolase [Schlesneria paludicola DSM 18645]
Length = 170
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PRS VH HR V+ ++F S ELL+ RR+ KD P S++GH+SAG+S +
Sbjct: 20 PRSVVHANHWLHRAVHIFVF-NSRGELLVHRRSANKDEAPLKCTSSASGHLSAGESYADA 78
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT 133
A REL+EELG+ P EF+ F +G + E + +Y TT
Sbjct: 79 AGRELEEELGLKAP---VEFLGIFPA-----NGAMTSFEHSGLYRTTT 118
>gi|373457472|ref|ZP_09549239.1| Isopentenyl-diphosphate Delta-isomerase [Caldithrix abyssi DSM
13497]
gi|371719136|gb|EHO40907.1| Isopentenyl-diphosphate Delta-isomerase [Caldithrix abyssi DSM
13497]
Length = 189
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G HR + +IF S ELLLQ+R+ K W W + H G++ + +R LQEE
Sbjct: 36 GLLHRAFSIFIF-NSQGELLLQQRSQDKRLWGLFWSNTCCSHPRKGETYEEATRRRLQEE 94
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LG+ P +F+F F Q D NE VY+ T P + E++A++
Sbjct: 95 LGLAAP---LKFLFKFQYQARFKDVG-SENELCAVYVGKTDEPP-----AVNPNEIAAIR 145
Query: 154 YIAYEEYKNLLAKDDPSFVPY 174
YI+ E+ + + F P+
Sbjct: 146 YISPEDLEKEMQAHPAQFTPW 166
>gi|212690623|ref|ZP_03298751.1| hypothetical protein BACDOR_00110 [Bacteroides dorei DSM 17855]
gi|345515813|ref|ZP_08795312.1| hypothetical protein BSEG_02666 [Bacteroides dorei 5_1_36/D4]
gi|423230009|ref|ZP_17216414.1| hypothetical protein HMPREF1063_02234 [Bacteroides dorei
CL02T00C15]
gi|423247100|ref|ZP_17228151.1| hypothetical protein HMPREF1064_04357 [Bacteroides dorei
CL02T12C06]
gi|212666723|gb|EEB27295.1| hydrolase, NUDIX family [Bacteroides dorei DSM 17855]
gi|229436448|gb|EEO46525.1| hypothetical protein BSEG_02666 [Bacteroides dorei 5_1_36/D4]
gi|392632219|gb|EIY26182.1| hypothetical protein HMPREF1063_02234 [Bacteroides dorei
CL02T00C15]
gi|392633340|gb|EIY27284.1| hypothetical protein HMPREF1064_04357 [Bacteroides dorei
CL02T12C06]
Length = 166
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
+EE ++ G TG R E H H V+ +F S EL LQRR D+KD P
Sbjct: 6 KEEMFPIVDEQGNITGAAT-RGECHNGSKLLHPVVHLHVF-NSKGELYLQRRPDWKDIQP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGI 96
G WD + GHI G+S + +RE++EELGI
Sbjct: 64 GKWDTAVGGHIDLGESVETALKREVKEELGI 94
>gi|410462198|ref|ZP_11315797.1| isopentenyldiphosphate isomerase [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409984708|gb|EKO40998.1| isopentenyldiphosphate isomerase [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 177
Score = 60.5 bits (145), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE +DV+ ++ + P +E HR G YHR ++ + L LQ+RA KD +PG
Sbjct: 11 EEMVDVVDENDREL-LVMPLAEAHRQGLYHRAAMVLVY-DPDGRLYLQKRAPHKDLYPGR 68
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGIN----LPKD--------AFEFVFTF 109
+D+S+ GH+ AG++ +A REL EELG+ P D A+EFV F
Sbjct: 69 FDLSATGHVQAGEAREEAAARELHEELGLTAKALTPVDAAQASRDTAYEFVTVF 122
>gi|297172853|gb|ADI23816.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured gamma proteobacterium HF4000_47G05]
Length = 178
Score = 60.5 bits (145), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E L V+ Q G + R ++HR+ HR ++ +F + L LQ+R K PG+W
Sbjct: 7 EILSVVDNQDQVIG-QRRRDDIHRLSLPHRAIHVLVFRLDGR-LFLQKRGLHKQESPGLW 64
Query: 69 DISSAGHISAGDSSLISAQRELQEELGI---NLPKDAFEFV 106
D S AGH+ AG++ RE++EE+GI +PK F+ V
Sbjct: 65 DSSVAGHVDAGETYDACCVREIEEEIGIRMEEMPKRLFKLV 105
>gi|167749576|ref|ZP_02421703.1| hypothetical protein EUBSIR_00534 [Eubacterium siraeum DSM 15702]
gi|167657430|gb|EDS01560.1| hydrolase, NUDIX family [Eubacterium siraeum DSM 15702]
Length = 178
Score = 60.5 bits (145), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ DV ++TG R + G+Y+ AWI S LL+ +R +K+ + G+W
Sbjct: 6 EYWDVYDKNRKRTGKLHKRGIRMQPGEYNIVCEAWIV--SGNRLLVTQRCKYKN-FGGLW 62
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G + AG+SS+ +RE++EE+GI++ + F + + F F D
Sbjct: 63 E-CTGGAVKAGESSIDCIKREIKEEIGIDVADEELTF------KGTKHGAAF----FIDC 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
Y + + L+ TLQ EVS K++ E++ +
Sbjct: 112 YELH--RDLSLDDLTLQTEEVSGAKFVTLAEFEKM 144
>gi|239906465|ref|YP_002953206.1| isopentenyl-diphosphate delta-isomerase family protein
[Desulfovibrio magneticus RS-1]
gi|239796331|dbj|BAH75320.1| isopentenyl-diphosphate delta-isomerase family protein
[Desulfovibrio magneticus RS-1]
Length = 184
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE +DV+ ++ + P E HR G YHR ++ + L LQ+RA KD +PG
Sbjct: 18 EEMVDVVDENDREL-LVMPLGEAHRQGLYHRAAMVLVY-DPAGRLYLQKRAPHKDLYPGR 75
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGIN----LPKD--------AFEFVFTF 109
+D+S+ GH+ AG++ +A REL EELG+ P D A+EFV F
Sbjct: 76 FDLSATGHVQAGEAREEAAARELHEELGLTAKTLTPVDAAQASRETAYEFVTVF 129
>gi|373458884|ref|ZP_09550651.1| NUDIX hydrolase [Caldithrix abyssi DSM 13497]
gi|371720548|gb|EHO42319.1| NUDIX hydrolase [Caldithrix abyssi DSM 13497]
Length = 361
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGD---YHRTVNAWIFAESTQELLLQRRADFKDSW 64
EE+ D++ G+ G + PRS VH G+ H TV+ I Q L LQ+R+ KD +
Sbjct: 197 EEYFDIVDPQGRILG-SAPRSAVH--GNPQLLHPTVHIHILNRQGQ-LYLQKRSQNKDLY 252
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPK 100
PG WD + GH+ G++ + +RE +EELGI+ K
Sbjct: 253 PGFWDTAVGGHVRHGEAIDDAMKREAKEELGIDASK 288
>gi|302843071|ref|XP_002953078.1| hypothetical protein VOLCADRAFT_121136 [Volvox carteri f.
nagariensis]
gi|300261789|gb|EFJ46000.1| hypothetical protein VOLCADRAFT_121136 [Volvox carteri f.
nagariensis]
Length = 180
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
RS H G +HR V A++F + ELL+QRR++ K PG WD+S A H+S G++ +
Sbjct: 38 RSICHGHGIWHRAVYAYLF-NTRGELLIQRRSEDKKVAPGQWDLSVAEHLSPGETFRDAV 96
Query: 87 QRELQEELGINL 98
R L EELG+ L
Sbjct: 97 ARGLAEELGVQL 108
>gi|374595014|ref|ZP_09668018.1| isopentenyl-diphosphate delta-isomerase [Gillisia limnaea DSM
15749]
gi|373869653|gb|EHQ01651.1| isopentenyl-diphosphate delta-isomerase [Gillisia limnaea DSM
15749]
Length = 172
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+QEE + ++ + G+ P+ E H+ G HR + ++F + EL+LQ+RA K P
Sbjct: 1 MQEEKVILVNEKDEPIGLM-PKMEAHQKGLLHRAFSVFVFNDKN-ELMLQQRALDKYHSP 58
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNE 124
G+W + H G++++ + +R LQEE+G D F++ N + + +F
Sbjct: 59 GLWTNTCCSHQREGETNIEAGKRRLQEEMGFTTELDDTIAFIYKAPFDNGLTEHEF---- 114
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLF 184
D LV N IP L E ++ K++ E +D P G Y + F
Sbjct: 115 --DHILVGKYNDIP----NLNPEEAASWKWMNLEG-----VAEDMQTNP----GLYTEWF 159
Query: 185 NIISQRY 191
II +Y
Sbjct: 160 KIIFDKY 166
>gi|294886287|ref|XP_002771650.1| Nucleolar protein Nop56, putative [Perkinsus marinus ATCC 50983]
gi|239875356|gb|EER03466.1| Nucleolar protein Nop56, putative [Perkinsus marinus ATCC 50983]
Length = 808
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 49 TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT 108
+ E+L+QRR+ KD+ P WD+S GH++ D + SA RE++EELG+++ E V
Sbjct: 566 SGEVLVQRRSLLKDTNPARWDVSVGGHVAGYDYVMASAVREVREELGVSVKPSDLEEVGV 625
Query: 109 FLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
+ +I+ E + + L+ L EV+ +++ + E L + D
Sbjct: 626 VATE--ARGSGYIDRELKHIAIYPWRG--RLQQLQLDPAEVTEAEWMPWVEVHRRLIRGD 681
Query: 169 PSFVPYD 175
FV ++
Sbjct: 682 REFVAFN 688
>gi|87120719|ref|ZP_01076612.1| putative NUDIX hydrolase [Marinomonas sp. MED121]
gi|86163947|gb|EAQ65219.1| putative NUDIX hydrolase [Marinomonas sp. MED121]
Length = 190
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSW 64
++ EE + ++ G K RSE+ D+HR +IF +LL+Q+R K
Sbjct: 14 IMSEEVISLIDKNNNLIGSVK-RSEMRFGIDFHRATYIFIFLPD-DKLLIQKRTLNKQFC 71
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINL 98
PG + I++ G ++ G+S ISAQREL+EELG++L
Sbjct: 72 PGYYGIATGGVVAHGESYAISAQRELKEELGLDL 105
>gi|406939414|gb|EKD72440.1| Isopentenyl-diphosphate delta-isomerase [uncultured bacterium]
Length = 175
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAES-TQELLLQRRADFKDSWPGMWDISSAGHISAG 79
TG+ S HR HR + +IF E T E+LLQ+RA K PG+W + H S G
Sbjct: 17 TGVADKIS-AHRNALCHRAFSIFIFREKPTLEILLQQRASHKYHSPGLWTNTCCSHPSPG 75
Query: 80 DSSLISAQRELQEELGINLP---KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNP 136
+ +L + QR LQEE+GI F ++ F D I NE V + ++
Sbjct: 76 EDTLAAGQRRLQEEMGIETMLKWVGKFHYIAHF-------DNGLIENEVDHVLTGSLVDH 128
Query: 137 IPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ F + EV +++ K L F P+
Sbjct: 129 V----FQVNPEEVQDYRWVNLSTLKEELTLLPEKFTPW 162
>gi|374387065|ref|ZP_09644556.1| isopentenyl-diphosphate delta-isomerase [Odoribacter laneus YIT
12061]
gi|373222736|gb|EHP45097.1| isopentenyl-diphosphate delta-isomerase [Odoribacter laneus YIT
12061]
Length = 179
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 22 GITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDS 81
GIT + E HR G HR + +IF E LLQRR FK G+W + H G+
Sbjct: 22 GITD-KLEAHRQGLLHRAILVFIFNHKG-EWLLQRRTAFKYHSGGLWSNTCCTHAHPGEI 79
Query: 82 SLISAQRELQEELGINLPKDAFEFVFTF 109
L +AQR+L+EE+G+ P + F FT+
Sbjct: 80 PLEAAQRKLKEEMGLKCPLEK-SFCFTY 106
>gi|384917264|ref|ZP_10017392.1| Isopentenyl-diphosphate delta-isomerase [Methylacidiphilum
fumariolicum SolV]
gi|384525297|emb|CCG93265.1| Isopentenyl-diphosphate delta-isomerase [Methylacidiphilum
fumariolicum SolV]
Length = 171
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE+ D++ + G R VH HR V+ + +E+ LQ+R+ KD P
Sbjct: 2 EEYFDIVDDKDKIIG-KDTRQNVHLKKLKHRAVHI-LLQNQNKEVFLQKRSPLKDVNPNC 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
WD S +GH+ +G+ +A REL EELG+ L + + + D K NEF
Sbjct: 60 WDSSCSGHVLSGEDYDTAAHRELTEELGLQLDQPLIKLF------KLSADAK-TGNEFIW 112
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
VYL + P F L E++ + ++ LA + SF
Sbjct: 113 VYLGFSNGP-----FQLNPQEIAEGNFYSFSWINFKLATEPESF 151
>gi|169773147|ref|XP_001821042.1| isopentenyl-diphosphate Delta-isomerase [Aspergillus oryzae RIB40]
gi|83768903|dbj|BAE59040.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391865734|gb|EIT75013.1| isopentenyl pyrophosphate,dimethylallyl pyrophosphate isomerase
[Aspergillus oryzae 3.042]
Length = 272
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H S D++++
Sbjct: 91 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGIAGETGSELDAAILG 149
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+AQR+L+ ELGI +P D F+F FT + +DGK+ +E + + L
Sbjct: 150 VKRAAQRKLEHELGIKPEQVPLDKFDF-FTRIHYKAPSDGKWGEHEIDYILFIQADVELK 208
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P P EV KY++ +E K + + F P+
Sbjct: 209 PSP--------NEVRDTKYVSADELKTMFEQPGLKFTPW 239
>gi|288802889|ref|ZP_06408326.1| isopentenyl-diphosphate delta-isomerase [Prevotella melaninogenica
D18]
gi|288334706|gb|EFC73144.1| isopentenyl-diphosphate delta-isomerase [Prevotella melaninogenica
D18]
Length = 183
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
E HR G HR V+ +F + + LL RRA K G+W + H + +A+R
Sbjct: 25 EAHRRGIMHRAVSVLVF-DPKRRWLLHRRALGKYHAGGLWTNACCTHPFVNEEPREAARR 83
Query: 89 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT-LNPIPLEAFTLQQT 147
L EE+G+++ D +F F + +++G I +E+ V++ TT + P+P
Sbjct: 84 RLFEEMGMDITHDGLRHLFDFTYRAELDNG-LIEHEYDSVFVYTTPIKPVP------NPE 136
Query: 148 EVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKEN 194
EV +YI + LA S+ P+ F II ++ K++
Sbjct: 137 EVMDWRYIDMRVLEEDLAAQPESYTPW---------FRIIFEQAKQH 174
>gi|256395060|ref|YP_003116624.1| isopentenyl-diphosphate delta-isomerase [Catenulispora acidiphila
DSM 44928]
gi|256361286|gb|ACU74783.1| isopentenyl-diphosphate delta-isomerase, type 1 [Catenulispora
acidiphila DSM 44928]
Length = 181
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSW 64
++ E + +L G G T P++ VH H + ++F E Q LL+ RRAD K +W
Sbjct: 1 MEVEEVVLLAEDGTPIG-TAPKATVHTENTPLHLAFSCYVFDEENQ-LLVTRRADSKRTW 58
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNE 124
PG+W S+ GH G+S + +R L ELG+++ + F + V+ +G + NE
Sbjct: 59 PGVWTNSACGHPGPGESIEDAVRRRLASELGLDI-TTILPLLPEFRYRAVMPNG-IVENE 116
Query: 125 FADVY---LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160
V+ + T + P P EV ++I + ++
Sbjct: 117 VCPVFRAVVATGITPSP------DPDEVGEYRWIPWADF 149
>gi|387887813|ref|YP_006318111.1| isopentenyl-diphosphate delta-isomerase [Escherichia blattae DSM
4481]
gi|414594170|ref|ZP_11443809.1| isopentenyl-diphosphate Delta-isomerase [Escherichia blattae NBRC
105725]
gi|386922646|gb|AFJ45600.1| isopentenyl-diphosphate delta-isomerase [Escherichia blattae DSM
4481]
gi|403194760|dbj|GAB81461.1| isopentenyl-diphosphate Delta-isomerase [Escherichia blattae NBRC
105725]
Length = 195
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
EH+ +L G GI + H+ H + WIF ELL+ RRA K +WPG+W
Sbjct: 4 EHVILLDPQGNPCGIQDKATVHHQDTPLHLAFSCWIF-NPEGELLITRRARSKRAWPGVW 62
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S GH G++ + R E G+ + + A V+ + + G+ + NE V
Sbjct: 63 TNSVCGHPQQGETFEQAIVRRCHYETGLTVEEIA--PVYPAFRYRARDTGQIVENEICPV 120
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVN 177
Y + P+ A EV ++I+ EE + + F P+ V+
Sbjct: 121 YAALSQMPVQPRA-----DEVMDWRWISLEEALREIDGNPDYFSPWMVS 164
>gi|160890855|ref|ZP_02071858.1| hypothetical protein BACUNI_03300 [Bacteroides uniformis ATCC 8492]
gi|270295860|ref|ZP_06202060.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317479716|ref|ZP_07938838.1| NUDIX domain-containing protein [Bacteroides sp. 4_1_36]
gi|156859854|gb|EDO53285.1| hydrolase, NUDIX family [Bacteroides uniformis ATCC 8492]
gi|270273264|gb|EFA19126.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904086|gb|EFV25918.1| NUDIX domain-containing protein [Bacteroides sp. 4_1_36]
Length = 167
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG R E H H ++ +F S EL LQ+R ++KD PG
Sbjct: 7 QEMFPLVDEQGNITG-AATRGECHNGSKLLHPVIHLHVF-NSKGELYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD S GH+ G+S ++ +RE++EELGI +P+ +VF
Sbjct: 65 KWDTSVGGHVDLGESVEMALKREVREELGITDFIPETVMHYVF 107
>gi|399887041|ref|ZP_10772918.1| NUDIX family protein [Clostridium arbusti SL206]
Length = 166
Score = 59.7 bits (143), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+L G KTG T R +YH VN WI E L+ +R K +P MW
Sbjct: 2 ELWDILDGNGNKTGKTIQRGNTMGQDEYHLIVNVWI-KNKKGEFLITKRTPNKKIFPNMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ ++ G + + SL +A RE++EE+ I+L + +F +Q+ ND +++F DV
Sbjct: 61 E-TTCGAATISEDSLKTALREVKEEISIDLSPKNGKCLFKLKRQH--ND----SSDFVDV 113
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKY 154
+L + ++ Q EV K+
Sbjct: 114 WLFK--EEVDIKEIIYQPEEVCGAKW 137
>gi|407452670|ref|YP_006724395.1| hypothetical protein B739_1912 [Riemerella anatipestifer RA-CH-1]
gi|403313654|gb|AFR36495.1| hypothetical protein B739_1912 [Riemerella anatipestifer RA-CH-1]
Length = 171
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 19 QKTGITKPRSEV---------HRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD 69
+K + P+ EV HR G HR + ++F + E+LLQRRA K P +W
Sbjct: 3 EKVVLVNPKDEVLGVMEKLQAHRGGFLHRAFSVFLF-NTKGEMLLQRRAGVKYHSPKLWT 61
Query: 70 ISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 129
+ H G+S AQR L EELGI+ D E F+F+ + + D + +
Sbjct: 62 NAVCSHPRLGESYKAGAQRRLIEELGID--ADISE-KFSFIYKAEVGDNLWEHE------ 112
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQ 189
L I F L EVS ++YI+ E L + F + F II +
Sbjct: 113 LDYVFTGIYEGDFNLNPEEVSEIRYISMEALDKELEANPEQFTEW---------FKIILK 163
Query: 190 RYKENTME 197
YK+ ++
Sbjct: 164 EYKQKMLK 171
>gi|309812762|ref|ZP_07706501.1| isopentenyl-diphosphate delta-isomerase [Dermacoccus sp. Ellin185]
gi|308433279|gb|EFP57172.1| isopentenyl-diphosphate delta-isomerase [Dermacoccus sp. Ellin185]
Length = 260
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 24 TKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSS 82
T PR+EVH R HR ++++ ++ + LLL RRA K +WPG+W + GH + +
Sbjct: 70 TCPRAEVHTRDTPLHRAFSSYLLDDAGR-LLLTRRALTKVAWPGVWTNTCCGHPRPDEPT 128
Query: 83 LISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAF 142
+ R ++EELG+++ + V + ++ + +E V LV ++P LE
Sbjct: 129 QDAVSRRVREELGLDVTQ--LRVVLPSYRYRAVDASGIVEHEICPV-LVGRIDPAQLEP- 184
Query: 143 TLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
EV ++A+ + + LA+ P+ +
Sbjct: 185 --HPDEVCEWAWVAWPDAVH-LARRTPALL 211
>gi|423301722|ref|ZP_17279745.1| hypothetical protein HMPREF1057_02886 [Bacteroides finegoldii
CL09T03C10]
gi|408471715|gb|EKJ90246.1| hypothetical protein HMPREF1057_02886 [Bacteroides finegoldii
CL09T03C10]
Length = 173
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRAD 59
MA+S +E ++ G TG T R E H H V+ IF + +L LQ+R +
Sbjct: 1 MAQSDNNQEMFPIVDEQGNITG-TATRGECHSGSKLLHPVVHLHIF-NANGDLYLQKRPE 58
Query: 60 FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
+KD PG WD + GHI G+S I+ +RE EELGI P+ +VF
Sbjct: 59 WKDIQPGKWDTAVGGHIDLGESVDIALRREANEELGITDFTPERLASYVF 108
>gi|238491096|ref|XP_002376785.1| isopentenyl-diphosphate delta-isomerase [Aspergillus flavus
NRRL3357]
gi|220697198|gb|EED53539.1| isopentenyl-diphosphate delta-isomerase [Aspergillus flavus
NRRL3357]
Length = 310
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H S D++++
Sbjct: 129 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGIAGETGSELDAAILG 187
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+AQR+L+ ELGI +P D F+F FT + +DGK+ +E + + L
Sbjct: 188 VKRAAQRKLEHELGIKPEQVPLDKFDF-FTRIHYKAPSDGKWGEHEIDYILFIQADVELK 246
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P P EV KY++ +E K + + F P+
Sbjct: 247 PSP--------NEVRDTKYVSADELKTMFEQPGLKFTPW 277
>gi|254444098|ref|ZP_05057574.1| hydrolase, NUDIX family, putative [Verrucomicrobiae bacterium
DG1235]
gi|198258406|gb|EDY82714.1| hydrolase, NUDIX family, putative [Verrucomicrobiae bacterium
DG1235]
Length = 127
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 54 LQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113
+Q+R+ KD+WPG WD S +GH+ +G+ L +A REL EELG ++ E +F L
Sbjct: 1 MQKRSKTKDTWPGAWDSSCSGHVDSGEDYLTAAHRELDEELGYKADRE-LEMLFKLLPCE 59
Query: 114 VINDGKFINNEFADVYLVTTLNPIPL 139
+ EF VY V P L
Sbjct: 60 ETGE------EFIHVYRVYGNGPFRL 79
>gi|423303879|ref|ZP_17281878.1| hypothetical protein HMPREF1072_00818 [Bacteroides uniformis
CL03T00C23]
gi|423307400|ref|ZP_17285390.1| hypothetical protein HMPREF1073_00140 [Bacteroides uniformis
CL03T12C37]
gi|392686877|gb|EIY80177.1| hypothetical protein HMPREF1072_00818 [Bacteroides uniformis
CL03T00C23]
gi|392690009|gb|EIY83280.1| hypothetical protein HMPREF1073_00140 [Bacteroides uniformis
CL03T12C37]
Length = 167
Score = 59.7 bits (143), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG R E H H ++ +F S EL LQ+R ++KD PG
Sbjct: 7 QEMFPLVDEQGNITG-AATRGECHNGSKLLHPVIHLHVF-NSKGELYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD S GH+ G+S ++ +RE++EELGI +P+ +VF
Sbjct: 65 KWDTSVGGHVDLGESVEMALKREVREELGITDFVPETVLHYVF 107
>gi|346226954|ref|ZP_08848096.1| hypothetical protein AtheD1_17560 [Anaerophaga thermohalophila DSM
12881]
Length = 174
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 42/170 (24%)
Query: 202 LQKQLRRYAHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEH 261
++ ++ Y L +L+ LS + KE L L+ + A +MD +F+ Q W + L D +K
Sbjct: 31 IKDRVEAYQSFRLTTDLSALSPSQKEMLPLLFEVADIMDNLFWQQAWGNKEQLLDNIKN- 89
Query: 262 ADASELDKLKWMYYLINKSPWSSLDENEAFLTTADSAVKLLPDATKPVNGWKGLEYKASF 321
D L+ Y IN PW L +NE F+ KG+
Sbjct: 90 ------DHLR-RYAEINYGPWDRLHDNEPFI--------------------KGIG----- 117
Query: 322 PLPKPPGANFYPPDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRSEFNL 371
KP GA FYP DM EF + D +TVI+R +E +L
Sbjct: 118 --QKPAGARFYPEDMSVNEFR-------QLSNLDKNGLYTVIERDNEGDL 158
>gi|391230057|ref|ZP_10266263.1| isopentenyldiphosphate isomerase [Opitutaceae bacterium TAV1]
gi|391219718|gb|EIP98138.1| isopentenyldiphosphate isomerase [Opitutaceae bacterium TAV1]
Length = 190
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R+EVHR HR ++ +F + + LQ+R+ KDS PG W S +GH+ AG+ +A
Sbjct: 35 RAEVHRQRLLHRAIHVLVF-DRAGRIFLQKRSMAKDSEPGRWASSCSGHVDAGEDYDTAA 93
Query: 87 QRELQEELGINL 98
REL EE+G+ +
Sbjct: 94 VRELAEEIGVRV 105
>gi|354596993|ref|ZP_09015010.1| Isopentenyl-diphosphate Delta-isomerase [Brenneria sp. EniD312]
gi|353674928|gb|EHD20961.1| Isopentenyl-diphosphate Delta-isomerase [Brenneria sp. EniD312]
Length = 180
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 21 TGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGD 80
TG+ + + + H G HR + +IF S ++LLLQRRA K G+W + H + G+
Sbjct: 16 TGVME-KQQAHVQGALHRAITVYIF-NSRRQLLLQRRAGAKYHSGGLWSNTCCSHPAPGE 73
Query: 81 SSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLE 140
+L +A R L +E+G+ + A +FT + +++G I +EF VY T + +P
Sbjct: 74 ETLQAAHRRLYQEMGL---RCALTPMFTLSYRLPLSNG-LIEHEFGHVYFGIT-DDLP-- 126
Query: 141 AFTLQQTEVSAVKYIAYEE 159
L E +Y+A E+
Sbjct: 127 --QLNPDEAEEYQYLALEQ 143
>gi|237729829|ref|ZP_04560310.1| isopentenyl-diphosphate delta-isomerase [Citrobacter sp. 30_2]
gi|226908435|gb|EEH94353.1| isopentenyl-diphosphate delta-isomerase [Citrobacter sp. 30_2]
Length = 184
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++EH+ +L Q G + + H + WIF E Q LL+ RR+ K +WP
Sbjct: 1 MRQEHVILLNEQDQPCGTLEKYAAHTATTPLHSAFSCWIFNEQGQ-LLVTRRSLHKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G++ + R + ELG ++ D V+ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGETHEAAIVRRARFELGADI--DLLSPVYDDFRYRATDPSGIVENEV 117
Query: 126 ADVYLVTTLNPIPL 139
VY ++P+ L
Sbjct: 118 CPVYAAHIVSPLQL 131
>gi|85819399|gb|EAQ40558.1| isopentenyl-diphosphate delta-isomerase [Dokdonia donghaensis
MED134]
Length = 172
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
++EE + ++ K G+ P+ E H+ HR + ++F + +EL+LQ+RA K P
Sbjct: 1 MKEELVILVDENDNKIGLM-PKMEAHQKAVLHRAFSVFVFNDK-KELMLQQRALHKYHSP 58
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W + H G+S++ + R LQEE+G +P E +F+ + ++G +
Sbjct: 59 GLWTNTCCSHQRDGESNIEAGTRRLQEEMGFTVP---LEESISFIYKAPFDNG--LTEHE 113
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
D L+ PL + + EV+A K++ E+ K
Sbjct: 114 LDHILIGHSEQEPL----INEEEVAAWKWMGLEDVK 145
>gi|27734632|sp|Q9HUW9.2|Y4841_PSEAE RecName: Full=Uncharacterized Nudix hydrolase PA4841
Length = 169
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL +QRR K +PG WD+++ G + AG+ S
Sbjct: 26 PRAELRERGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEPYADS 84
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL+EELGI +DA L+++ G+F +E + + + LQ
Sbjct: 85 AARELEEELGI---RDA------VLREH----GRFFFDEPGNRLWCAVFSAVSDAPLRLQ 131
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+S ++I E LA ++ +PY
Sbjct: 132 AEEISEARFIRPE-----LALEEARSLPY 155
>gi|299143766|ref|ZP_07036846.1| MutT/NUDIX family protein [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518251|gb|EFI41990.1| MutT/NUDIX family protein [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 170
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWI-FAESTQELLLQRRADFKDSWPGM 67
E D+ G+K + + G+YH V WI E T L+Q+R+ K +P M
Sbjct: 3 EFWDIYNKQGKKKNKVIRKGQPLLNGEYHLIVEGWIRCGEDT--FLIQKRSANKKLFPNM 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W S G + AG+ + RE +EELGI++ D +I + I +
Sbjct: 61 WYCSLGGSVQAGEDAKQGLIREAKEELGIDISND------------LIKLKRIITENYCI 108
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y+ I L+ LQ+ EV+ VK E +L+ ++ ++ Y
Sbjct: 109 FYIYLIERDIDLKEIVLQKEEVADVKIATKSEICDLIKNNEMIYLDY 155
>gi|49081582|gb|AAT50191.1| PA4841, partial [synthetic construct]
Length = 179
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL +QRR K +PG WD+++ G + AG+ S
Sbjct: 35 PRAELRERGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEPYADS 93
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL+EELGI +DA L+++ G+F +E + + + LQ
Sbjct: 94 AARELEEELGI---RDA------VLREH----GRFFFDEPGNRLWCAVFSAVSDAPLRLQ 140
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+S ++I E LA ++ +PY
Sbjct: 141 AEEISEARFIRPE-----LALEEARSLPY 164
>gi|343426264|emb|CBQ69795.1| probable isopentenyl-diphosphate delta-isomerase [Sporisorium
reilianum SRZ2]
Length = 267
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 43/180 (23%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------I 84
G HR + ++F +T +LLLQRRA K ++P MW + H A L
Sbjct: 72 GLLHRAFSVFLFDPATGKLLLQRRALEKITFPNMWTNTCCSHPLAIKGELEEADQIGVRR 131
Query: 85 SAQRELQEELGI---NLPKDAFEFV--FTFLQQNVINDGKFINNEF-------ADVYLVT 132
+AQR+L ELGI +P D F+++ +L N D + +E ADV L +
Sbjct: 132 AAQRKLDHELGIPAEQVPLDQFQYLTRIHYLAPNGDADNIWGEHEIDYILFITADVTLQS 191
Query: 133 TLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP-SFVPYDVNGGYGQLFNIISQRY 191
LN EV K+++ +E K L+ + DP SF P+ F +I Q++
Sbjct: 192 NLN------------EVCDTKWVSPQELKALMTELDPASFTPW---------FKLIVQKF 230
>gi|326796611|ref|YP_004314431.1| NUDIX hydrolase [Marinomonas mediterranea MMB-1]
gi|326547375|gb|ADZ92595.1| NUDIX hydrolase [Marinomonas mediterranea MMB-1]
Length = 179
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEEL 94
D HR +F ++L++Q+R D K+ PG + I++ G + +G+S + A+REL+EEL
Sbjct: 32 DIHRVTYVLVFTPE-KKLIVQKRTDDKEFCPGYFGITTGGVVESGESYQLCAERELKEEL 90
Query: 95 GINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKY 154
G++LP + FT + I GK ++ Y T + TLQ EV+AVK
Sbjct: 91 GVSLPLTSHGVFFTEGEGYRIW-GKL----YSACYDKTKHGEL-----TLQPKEVAAVKE 140
Query: 155 IAYE 158
++ E
Sbjct: 141 MSVE 144
>gi|392964876|ref|ZP_10330296.1| putative Nudix hydrolase CA_C0446 [Fibrisoma limi BUZ 3]
gi|387846259|emb|CCH52342.1| putative Nudix hydrolase CA_C0446 [Fibrisoma limi BUZ 3]
Length = 186
Score = 59.3 bits (142), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
+ LD++ + G K + ++ R GD+HRT ++ + + LL R D K+ P W
Sbjct: 3 QELDIVDEQNRPLGRRKRKRDIERDGDWHRTAQIFVLNQRNELLLTLRHPD-KEILPNYW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
DI GHI G++ A RE +EE+GI + + + + + E A V
Sbjct: 62 DICIGGHIEPGETYDEGALRETEEEVGIRPQPGELQPLGIVSVEMIDERIPLRDREHAQV 121
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSF 171
Y+ L FT Q EV+ ++++ + + L SF
Sbjct: 122 YVWQV--TFDLTDFTPQSDEVADMRFVPLDYVRQDLLAATSSF 162
>gi|46395586|sp|Q7X5H2.1|IDI_CITFR RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|30961859|gb|AAP40014.1| isopentenyl-diphosphate delta-isomerase [Citrobacter freundii]
Length = 182
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++E + +L GQ G + + H + WIF E Q LL+ RR+ K +WP
Sbjct: 1 MRQERVILLNEQGQPCGTLEKYAAHTATTPLHSAFSCWIFNEQGQ-LLVTRRSLHKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+++ + R ELG ++ D+ V+T + + + NE
Sbjct: 60 GVWTNSVCGHPQLGETTEAAINRRACFELGADI--DSLSPVYTDFRYCATDPSGIVENEV 117
Query: 126 ADVY 129
VY
Sbjct: 118 CPVY 121
>gi|357633203|ref|ZP_09131081.1| NUDIX hydrolase [Desulfovibrio sp. FW1012B]
gi|357581757|gb|EHJ47090.1| NUDIX hydrolase [Desulfovibrio sp. FW1012B]
Length = 178
Score = 59.3 bits (142), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 23 ITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSS 82
+ P +E HR G +HR+V ++ ++ +L LQ+R +PG +D+S+ GH+ AG+S
Sbjct: 25 LVMPLAEAHRQGLFHRSVRVLVY-DARGKLYLQKRTADTRRYPGRFDLSATGHVRAGESR 83
Query: 83 LISAQRELQEELGI 96
+A R+L EELG+
Sbjct: 84 HEAAARKLYEELGL 97
>gi|255956785|ref|XP_002569145.1| Pc21g21730 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590856|emb|CAP97070.1| Pc21g21730 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 270
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H S D++++
Sbjct: 89 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGSELDAAVMG 147
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+AQR+L ELGI +P D FEF FT + +DGK+ +E + + LN
Sbjct: 148 VKRAAQRKLNHELGIKAEQVPLDKFEF-FTRIHYKAPSDGKWGEHEVDYILFIQADVDLN 206
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P P EV Y++ +E K + + F P+
Sbjct: 207 PSP--------NEVRDTTYVSADELKAMFEQPGLKFTPW 237
>gi|386392001|ref|ZP_10076782.1| isopentenyldiphosphate isomerase [Desulfovibrio sp. U5L]
gi|385732879|gb|EIG53077.1| isopentenyldiphosphate isomerase [Desulfovibrio sp. U5L]
Length = 178
Score = 59.3 bits (142), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 23 ITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSS 82
+ P +E HR G +HR+V ++ ++ +L LQ+R +PG +D+S+ GH+ AG+S
Sbjct: 25 LVMPLAEAHRQGLFHRSVRVLVY-DARGKLYLQKRTADTRRYPGRFDLSATGHVRAGESR 83
Query: 83 LISAQRELQEELGI 96
+A R+L EELG+
Sbjct: 84 HEAAARKLYEELGL 97
>gi|398560171|gb|AFO85457.1| Isopentenyl-diphosphate delta-isomerase [Marinactinospora
thermotolerans]
Length = 173
Score = 59.3 bits (142), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 18 GQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI 76
G+ TG+ P++ VH H + +I + +L+ RRA K +WPG+W S GH
Sbjct: 8 GRPTGVA-PKATVHTTDTPLHLAFSCYILGRQGR-VLVTRRALAKRTWPGVWTNSCCGHP 65
Query: 77 SAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLV-TTLN 135
G+ + + +R ++EEL + L D E + F + DG + NE VYL T +
Sbjct: 66 GPGEPTPAAVRRRVREELSLEL-SDLAEVLPDFRYRATAADGT-VENEICPVYLARTDTD 123
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
P+P A EV+ +++ + E L
Sbjct: 124 PVPAVA------EVAEWRWVDWSELVTL 145
>gi|398843365|ref|ZP_10600511.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudomonas sp.
GM102]
gi|398103225|gb|EJL93397.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudomonas sp.
GM102]
Length = 187
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE L ++ +K G P+ + H+ G HR + +IF ++ + LLLQ+RA K G+
Sbjct: 2 EELLILVDQHDRKKGFA-PKLQAHQQGLLHRAFSIFIFDQAGR-LLLQQRAFGKYHSQGL 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + GH G+ +L +A+R LQEE+G+ + V T L + +++ + I EF
Sbjct: 60 WTNTCCGHPRPGERTLAAAKRRLQEEMGMTC---SLRKVSTLLYREQVSN-QLIEYEFDH 115
Query: 128 VYL-VTTLNPI--PLEAFTLQQTEVSAV 152
V++ ++ +P+ P EA Q ++S +
Sbjct: 116 VFVGISDGDPVANPEEAHAWQWLKLSQI 143
>gi|15600034|ref|NP_253528.1| hypothetical protein PA4841 [Pseudomonas aeruginosa PAO1]
gi|107103940|ref|ZP_01367858.1| hypothetical protein PaerPA_01005011 [Pseudomonas aeruginosa PACS2]
gi|218893935|ref|YP_002442804.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
LESB58]
gi|254238437|ref|ZP_04931760.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254244261|ref|ZP_04937583.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313109831|ref|ZP_07795766.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
39016]
gi|355642953|ref|ZP_09052962.1| hypothetical protein HMPREF1030_02048 [Pseudomonas sp. 2_1_26]
gi|386061012|ref|YP_005977534.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
M18]
gi|386063656|ref|YP_005978960.1| hypothetical protein NCGM2_0688 [Pseudomonas aeruginosa NCGM2.S1]
gi|392986516|ref|YP_006485103.1| isopentenyldiphosphate isomerase [Pseudomonas aeruginosa DK2]
gi|416864886|ref|ZP_11915568.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
138244]
gi|418583086|ref|ZP_13147157.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592824|ref|ZP_13156686.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
MPAO1/P2]
gi|419751617|ref|ZP_14278028.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
PADK2_CF510]
gi|420142034|ref|ZP_14649666.1| hypothetical protein PACIG1_5179 [Pseudomonas aeruginosa CIG1]
gi|421156359|ref|ZP_15615808.1| hypothetical protein PABE171_5187 [Pseudomonas aeruginosa ATCC
14886]
gi|421163427|ref|ZP_15622144.1| hypothetical protein PABE173_5680 [Pseudomonas aeruginosa ATCC
25324]
gi|421170630|ref|ZP_15628571.1| hypothetical protein PABE177_5354 [Pseudomonas aeruginosa ATCC
700888]
gi|421182920|ref|ZP_15640388.1| hypothetical protein PAE2_4873 [Pseudomonas aeruginosa E2]
gi|421519405|ref|ZP_15966076.1| hypothetical protein A161_24155 [Pseudomonas aeruginosa PAO579]
gi|424944369|ref|ZP_18360132.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
NCMG1179]
gi|451985885|ref|ZP_21934087.1| Putative Nudix hydrolase YfcD [Pseudomonas aeruginosa 18A]
gi|9951111|gb|AAG08226.1|AE004897_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126170368|gb|EAZ55879.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126197639|gb|EAZ61702.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218774163|emb|CAW29980.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
LESB58]
gi|310882268|gb|EFQ40862.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
39016]
gi|334834815|gb|EGM13740.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
138244]
gi|346060815|dbj|GAA20698.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
NCMG1179]
gi|347307318|gb|AEO77432.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
M18]
gi|348032215|dbj|BAK87575.1| hypothetical protein NCGM2_0688 [Pseudomonas aeruginosa NCGM2.S1]
gi|354829953|gb|EHF14012.1| hypothetical protein HMPREF1030_02048 [Pseudomonas sp. 2_1_26]
gi|375047693|gb|EHS40236.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375048376|gb|EHS40901.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
MPAO1/P2]
gi|384402079|gb|EIE48431.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392322021|gb|AFM67401.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
DK2]
gi|403245208|gb|EJY59032.1| hypothetical protein PACIG1_5179 [Pseudomonas aeruginosa CIG1]
gi|404345324|gb|EJZ71676.1| hypothetical protein A161_24155 [Pseudomonas aeruginosa PAO579]
gi|404519234|gb|EKA30008.1| hypothetical protein PABE171_5187 [Pseudomonas aeruginosa ATCC
14886]
gi|404522941|gb|EKA33397.1| hypothetical protein PABE177_5354 [Pseudomonas aeruginosa ATCC
700888]
gi|404528741|gb|EKA38803.1| hypothetical protein PABE173_5680 [Pseudomonas aeruginosa ATCC
25324]
gi|404541018|gb|EKA50393.1| hypothetical protein PAE2_4873 [Pseudomonas aeruginosa E2]
gi|451756449|emb|CCQ86610.1| Putative Nudix hydrolase YfcD [Pseudomonas aeruginosa 18A]
gi|453043862|gb|EME91589.1| isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
PA21_ST175]
Length = 178
Score = 59.3 bits (142), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL +QRR K +PG WD+++ G + AG+ S
Sbjct: 35 PRAELRERGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEPYADS 93
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL+EELGI +DA L+++ G+F +E + + + LQ
Sbjct: 94 AARELEEELGI---RDA------VLREH----GRFFFDEPGNRLWCAVFSAVSDAPLRLQ 140
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+S ++I E LA ++ +PY
Sbjct: 141 AEEISEARFIRPE-----LALEEARSLPY 164
>gi|375088065|ref|ZP_09734407.1| hypothetical protein HMPREF9703_00489 [Dolosigranulum pigrum ATCC
51524]
gi|374562895|gb|EHR34218.1| hypothetical protein HMPREF9703_00489 [Dolosigranulum pigrum ATCC
51524]
Length = 175
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G+Y V+A I + E+L+Q+RA+ K W +WDIS +G AG++S RE++EE
Sbjct: 27 GEYIVIVHALIL-NTNGEILIQQRANDKSLWANLWDISCSGAPIAGETSAEGIAREIKEE 85
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LG ++ D + T F ++ F+D Y+ + + E+ A+
Sbjct: 86 LGWSIDFDHIRPILT---------ANF-DHGFSDYYVYQLDKSLSIADIQYNTQEIQAIN 135
Query: 154 YIAYEEYKNLLAKDDPSFVPY 174
++ E L+ +D FVPY
Sbjct: 136 WVTMPEILALIEQD--KFVPY 154
>gi|255690465|ref|ZP_05414140.1| putative NTP pyrophosphohydrolase [Bacteroides finegoldii DSM
17565]
gi|260623914|gb|EEX46785.1| hydrolase, NUDIX family [Bacteroides finegoldii DSM 17565]
Length = 173
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRAD 59
MA+S +E ++ G TG T R E H H V+ IF + +L LQ+R +
Sbjct: 1 MAQSDNNQEMFPIVDEQGNITG-TATRGECHSGSKLLHPVVHLHIF-NANGDLYLQKRPE 58
Query: 60 FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
+KD PG WD + GHI G+S I+ RE EELGI P+ +VF
Sbjct: 59 WKDIQPGKWDTAVGGHIDLGESVDIALSREANEELGITDFTPERLTSYVF 108
>gi|150002937|ref|YP_001297681.1| NTP pyrophosphohydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931361|gb|ABR38059.1| putative NTP pyrophosphohydrolase [Bacteroides vulgatus ATCC
8482]
Length = 166
Score = 59.3 bits (142), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
+EE ++ G TG T R E H H V+ +F S EL LQ+R D+KD P
Sbjct: 6 KEEMFPIVDEQGNITG-TATRGECHNGSKLLHPVVHLHVF-NSKGELYLQKRPDWKDIQP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGI 96
G WD + GHI G++ + +RE++EELGI
Sbjct: 64 GKWDTAVGGHIDLGENVETALKREVKEELGI 94
>gi|373854930|ref|ZP_09597727.1| NUDIX hydrolase [Opitutaceae bacterium TAV5]
gi|372471712|gb|EHP31725.1| NUDIX hydrolase [Opitutaceae bacterium TAV5]
Length = 190
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 23/117 (19%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R EVHR HR ++ +F + + LQ+R+ KDS PG W S +GH+ AG+ +A
Sbjct: 35 RGEVHRQRLLHRAIHVLVF-DRAGRIFLQKRSMAKDSEPGRWASSCSGHVDAGEDYDTAA 93
Query: 87 QRELQEELGINLP-------------KDAFEFVFTF---------LQQNVINDGKFI 121
REL EE+G+ + + +EFV+ + L I+DG++I
Sbjct: 94 VRELAEEIGVRVAEAPPRWLRAGPCRETGWEFVWVYRLEHEGPFALHPAEIDDGRWI 150
>gi|71021509|ref|XP_760985.1| hypothetical protein UM04838.1 [Ustilago maydis 521]
gi|46101060|gb|EAK86293.1| hypothetical protein UM04838.1 [Ustilago maydis 521]
Length = 262
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------I 84
G HR + ++F +T +LLLQRRA K ++P MW + H A L
Sbjct: 67 GLLHRAFSVFLFDPTTGKLLLQRRALEKITFPNMWTNTCCSHPLAIKGELEEAEQIGVRR 126
Query: 85 SAQRELQEELGI---NLPKDAFEFV--FTFLQQNVINDGKFINNEFADVYLVT---TLNP 136
+AQR+L ELGI +P D F+++ +L N + + +E + +T TL P
Sbjct: 127 AAQRKLDHELGIRAEQVPLDEFQYLTRIHYLAPNNDANNMWGEHEIDYILFITADVTLKP 186
Query: 137 IPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP-SFVPY 174
EV K+++ EE K L+ + DP SF P+
Sbjct: 187 --------NLNEVCDTKWVSPEELKALMTELDPASFTPW 217
>gi|407718931|ref|YP_006796336.1| hypothetical protein C270_07140 [Leuconostoc carnosum JB16]
gi|407242687|gb|AFT82337.1| hypothetical protein C270_07140 [Leuconostoc carnosum JB16]
Length = 172
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ + Q+TG T R + GDYH NA I + Q +L+Q+R+ K S PG W
Sbjct: 11 ELWDIYDVNKQRTGRTHLRGQKLANGDYHLVANAIILNDEKQ-ILIQQRSFKKLSRPGQW 69
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S G + ++S + REL+EEL + + + T ++ + D
Sbjct: 70 TAESGGSVLQNETSQHAIVRELREELNLVVDIAQLGMLTT----------RYYFDWIEDW 119
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEE 159
Y V I L+ T+QQ+EV +++ EE
Sbjct: 120 YAVHV--NIKLDDLTIQQSEVERIRWATLEE 148
>gi|326801026|ref|YP_004318845.1| isopentenyl-diphosphate delta-isomerase [Sphingobacterium sp. 21]
gi|326551790|gb|ADZ80175.1| Isopentenyl-diphosphate Delta-isomerase [Sphingobacterium sp. 21]
Length = 172
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 12 DVLTMTGQKTGITK-PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDI 70
+V+ + Q + K + E H+ G HR + ++F + ELLLQRRA K G+W
Sbjct: 3 EVILVNEQDEAVGKMEKLEAHQKGLLHRAFSIFVF-NTAGELLLQRRALNKYHSGGLWTN 61
Query: 71 SSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
+ H + +LI+AQ LQEE+G + +F+FL + ++G + +EF VY+
Sbjct: 62 TCCSHPLPNEDTLIAAQNRLQEEMGF---QTTLRPLFSFLYKTSFHNG-LVEHEFDHVYV 117
Query: 131 VTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
I + EV ++IAY+ + ++ +F
Sbjct: 118 GEFSGEI-----IPNREEVMDYQWIAYQNLEQMIKSSPDAFT 154
>gi|118581652|ref|YP_902902.1| NUDIX hydrolase [Pelobacter propionicus DSM 2379]
gi|118504362|gb|ABL00845.1| NUDIX hydrolase [Pelobacter propionicus DSM 2379]
Length = 178
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96
H V+ +F S +LLLQ+R KD PG WD S GHI +G+ + QRE+ EE+GI
Sbjct: 32 HPVVHVHVF-NSGGKLLLQKRKLTKDIQPGKWDTSVGGHIQSGELLEDAIQREVLEEIGI 90
Query: 97 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
+ + +L ++ I E+ Y T P F +Q+ E+ V+++
Sbjct: 91 EIDPARLRPLGRYLFESE------IEREYVYSYACTHDGP-----FRIQEEEIDEVRFLD 139
Query: 157 YEEYKNLLAKDD--PSF 171
E +L+A + P+F
Sbjct: 140 ITEIDDLIATGETTPNF 156
>gi|429857999|gb|ELA32835.1| isopentenyl-diphosphate delta-isomerase [Colletotrichum
gloeosporioides Nara gc5]
Length = 254
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGH---ISAGDSSLI------ 84
G HR + ++F ++ +LLLQ+RA K ++P MW + H I S +
Sbjct: 74 GLLHRAFSVFLF-DADNKLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGSNLEDSVAG 132
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+A+R+L+ ELGI+ +P D F F+ T + +DGK+ +E + + LN
Sbjct: 133 VKNAARRKLEHELGIDPKQVPFDDFHFL-TRIHYKAPSDGKWGEHEIDYILFIKAKVDLN 191
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P + EV A +Y++ +E KNL + D F P+
Sbjct: 192 P--------NKNEVQATQYVSADELKNLFKQPDLKFTPW 222
>gi|393789258|ref|ZP_10377380.1| hypothetical protein HMPREF1068_03660 [Bacteroides nordii
CL02T12C05]
gi|392651344|gb|EIY45007.1| hypothetical protein HMPREF1068_03660 [Bacteroides nordii
CL02T12C05]
Length = 169
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG R E H H V+ +F+ S +L LQ+R ++KD PG
Sbjct: 7 QEMFPIVDEEGNITGAAT-RGECHSGSKLLHPVVHLHVFS-SKGDLYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD + GH+ G+S I+ +RE+QEELGI +P+ +VF
Sbjct: 65 KWDTAVGGHVDLGESVEIALKREVQEELGITDFIPEHLTSYVF 107
>gi|329296004|ref|ZP_08253340.1| isopentenyl-diphosphate delta-isomerase [Plautia stali symbiont]
Length = 177
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S ELLLQRRA K G+W + H + + +A+R
Sbjct: 23 EVHEKGLLHRAVTVYVF-NSCHELLLQRRAQSKYHCGGLWSNTCCSHPYPQEPTRDAAER 81
Query: 89 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148
L+EE+G++L A VF L N+ I +E+ V+ I E L E
Sbjct: 82 RLREEMGLDL---ALTPVFE-LSYNLPLSNGLIEHEYGHVFFA-----ISDEVPVLNLDE 132
Query: 149 VSAVKYIAYEEYKNLLAKDDPSFVPY 174
Y + E+ + + ++ F P+
Sbjct: 133 ADDWCYRSVEQIQQEMRENPAKFTPW 158
>gi|442319032|ref|YP_007359053.1| NUDIX family hydrolase [Myxococcus stipitatus DSM 14675]
gi|441486674|gb|AGC43369.1| NUDIX family hydrolase [Myxococcus stipitatus DSM 14675]
Length = 164
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E +DV+ G+ G R EV+ HR V+ + E ++ LQRR+ PG
Sbjct: 2 EQMDVIDAQGRVVG-RASREEVYGQKLPHRIVH--VMVEHDGKVFLQRRSLQMKFMPGHL 58
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAF-EFVF 107
S+ GH+ AG++ L +AQREL+EELG++ P EFVF
Sbjct: 59 CTSAGGHVDAGEAPLDAAQRELREELGLDSPLSLVAEFVF 98
>gi|260941590|ref|XP_002614961.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851384|gb|EEQ40848.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 283
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 31/169 (18%)
Query: 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGH---------ISAGDS-- 81
G HR + ++F E + LLLQ+RAD K ++P MW + H + A +S
Sbjct: 88 AGLLHRAFSVFLFNEDNK-LLLQQRADEKITFPNMWTNTCCSHPLCFPSELGLEASESTG 146
Query: 82 -----------SLISAQRELQEELGI---NLPKDAFEFVFTFLQQNVIND--GKFINNEF 125
S I+AQR+L ELGI + P D FEF+ ++ D K+ +E
Sbjct: 147 NLNDLQTAVAGSKIAAQRKLFHELGIPAQDCPIDKFEFLTRIHYKSASGDESSKWGEHEI 206
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ ++ T N I ++A EV KY++ +E K++ + F P+
Sbjct: 207 DYILILKTSNSITIDA---NYNEVRDFKYVSKQELKDMFNDETLVFTPW 252
>gi|402494816|ref|ZP_10841553.1| IPP:DMAPP isomerase 2 [Aquimarina agarilytica ZC1]
Length = 174
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
Q G+ + + E H HR + ++ E EL+LQRRA K PG+W + H
Sbjct: 14 QPIGLME-KLEAHEKALLHRAFSVFVLNEKG-ELMLQRRALHKYHSPGLWTNTCCSHQRE 71
Query: 79 GDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPI 137
G++SL + R LQEE+G P K+ F F++ N + + +F D LV
Sbjct: 72 GETSLEAGVRRLQEEMGFVTPLKEKFSFIYKAKFDNGLTEHEF------DHVLVGNYEAD 125
Query: 138 PLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P+ + EV+A K++ E K + + + P+
Sbjct: 126 PI----INPDEVAAWKWVDLEIIKKDITSNPEIYTPW 158
>gi|385787816|ref|YP_005818925.1| isopentenyl-diphosphate delta-isomerase [Erwinia sp. Ejp617]
gi|310767088|gb|ADP12038.1| Isopentenyl-diphosphate delta-isomerase [Erwinia sp. Ejp617]
Length = 162
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S +LLLQ+RA K G+W ++ GH +S+ +AQR
Sbjct: 5 EVHEKGLLHRAVTVYVF-NSDHQLLLQQRARGKYHCGGLWSNTTCGHPYPQESTAEAAQR 63
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNP 136
L EE+G++L + FE + N + + ++ + FA + +NP
Sbjct: 64 RLIEEMGLDLDLQPVFELSYNLPLSNGLTEHEYGHVYFAISDALPAINP 112
>gi|358366417|dbj|GAA83038.1| isopentenyl-diphosphate delta-isomerase [Aspergillus kawachii IFO
4308]
Length = 271
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 36/163 (22%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H S D++++
Sbjct: 90 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGSQLDAAVLG 148
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEF-------ADVYLV 131
+AQR+L+ ELGI +P D FEF FT + +DGK+ +E ADV L
Sbjct: 149 VKRAAQRKLEHELGIKPEQVPLDKFEF-FTRIHYKAPSDGKWGEHEIDYILFIQADVEL- 206
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+NP EV +Y++ +E K + + F P+
Sbjct: 207 -NVNP----------NEVRDTRYVSADELKQMFEQPGLKFTPW 238
>gi|292487723|ref|YP_003530596.1| isopentenyl-diphosphate delta-isomerase [Erwinia amylovora
CFBP1430]
gi|292898956|ref|YP_003538325.1| isopentenyl-diphosphate delta-isomerase [Erwinia amylovora ATCC
49946]
gi|428784658|ref|ZP_19002149.1| isopentenyl-diphosphate delta-isomerase [Erwinia amylovora
ACW56400]
gi|291198804|emb|CBJ45913.1| putative isopentenyl-diphosphate delta-isomerase [Erwinia amylovora
ATCC 49946]
gi|291553143|emb|CBA20188.1| isopentenyl-diphosphate delta-isomerase [Erwinia amylovora
CFBP1430]
gi|312171836|emb|CBX80093.1| isopentenyl-diphosphate delta-isomerase [Erwinia amylovora ATCC
BAA-2158]
gi|426276220|gb|EKV53947.1| isopentenyl-diphosphate delta-isomerase [Erwinia amylovora
ACW56400]
Length = 181
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S +LLLQ+RA K G+W ++ GH +S+ +AQR
Sbjct: 23 EVHEKGLLHRAVTVYVF-NSDHQLLLQQRARGKYHCGGLWSNTTCGHPYPQESTADAAQR 81
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNP 136
L EE+G++L + FE + N + + ++ + FA + +NP
Sbjct: 82 RLLEEMGLDLHLQPMFELSYNLPLSNGLTEHEYGHVYFAVSDALPAINP 130
>gi|389572999|ref|ZP_10163076.1| hypothetical protein BAME_16450 [Bacillus sp. M 2-6]
gi|388427444|gb|EIL85252.1| hypothetical protein BAME_16450 [Bacillus sp. M 2-6]
Length = 208
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 9 EHLDVLTMTGQKTGI-TKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRADFKDSWP 65
EH + M Q I T RS++H G +H T + W+ + T L Q R+ K +P
Sbjct: 2 EHEKLNIMNNQHETIGTAARSDIHAEGLWHETFHFWLLKKEDDTVFLYFQLRSPSKKDFP 61
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFE-FVFTFLQQNVINDGKFINNE 124
++DI++AGH+ A D RE++EELG+++ +FE F + ++ I+ F + E
Sbjct: 62 SLFDITAAGHLLA-DEQPSDGIREVEEELGLSI---SFENLTFAGVIKDEIHMPSFTDRE 117
Query: 125 FADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
F VYL ++ LQ+ EV+ + + + LL+++
Sbjct: 118 FCHVYLY--MDQKEHMDVHLQKEEVAGLYRARLMDAQQLLSRE 158
>gi|148927935|ref|ZP_01811341.1| NUDIX hydrolase [candidate division TM7 genomosp. GTL1]
gi|147886724|gb|EDK72288.1| NUDIX hydrolase [candidate division TM7 genomosp. GTL1]
Length = 172
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ E+ R HR V + + T +LLQRR+ K +P WD+S AGH+ G+ +A
Sbjct: 21 KEELWRQNLPHRIVKI-VIEDETGRILLQRRSPNKIPFPDNWDVSVAGHVDEGEDYEQAA 79
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVY--LVTTLNPIPLEAFTL 144
REL EELGI DA V + + + + + + N F VY + +L P+ E
Sbjct: 80 LRELSEELGI---MDATLTVLGDYRSHSMYEWRRL-NRFNRVYKGQINSLTPLVPEV--- 132
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFV 172
+++ V+++ E +NL+ K+DP V
Sbjct: 133 --GDIAEVRWVTLAELQNLI-KNDPDHV 157
>gi|421845324|ref|ZP_16278479.1| isopentenyl-diphosphate delta-isomerase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411773645|gb|EKS57190.1| isopentenyl-diphosphate delta-isomerase [Citrobacter freundii ATCC
8090 = MTCC 1658]
Length = 184
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++EH+ +L Q G + + H + WIF E Q LL+ RR+ K +WP
Sbjct: 1 MRQEHVILLNEQEQPCGTLEKYAAHTATTPLHSAFSCWIFNEQGQ-LLVTRRSLHKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+++ ++ R + ELG ++ D V+ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGETNEVAIVRRARFELGADI--DLLTPVYADFRYRATDPSGIVENEV 117
Query: 126 ADVY---LVTTLNPIPLEAFTLQQTEVSAV 152
VY +V+ L P E Q + + V
Sbjct: 118 CPVYAAHIVSELQLNPDEVMDCQWSNLENV 147
>gi|297170679|gb|ADI21703.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured Verrucomicrobiales bacterium HF0130_14P10]
Length = 172
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R VH +HR ++ ++ ++ +L+Q+R+ KDS G+W S +GH+ AG+ L +A
Sbjct: 22 REVVHSRELFHRAIHVFVL-DTAGRMLVQKRSMLKDSAAGLWCSSCSGHLDAGEDYLGAA 80
Query: 87 QRELQEELGINL-PKD 101
REL+EELG+++ PK+
Sbjct: 81 VRELEEELGLDIVPKN 96
>gi|296391673|ref|ZP_06881148.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
PAb1]
gi|416877690|ref|ZP_11919933.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
152504]
gi|334839276|gb|EGM17966.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
152504]
Length = 178
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL +QRR K +PG WD+++ G + AG+ S
Sbjct: 35 PRAELRERGLIGRGTFILLF-NSAGELRVQRRTLSKAVYPGYWDLAAGGMVQAGEPYADS 93
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL+EELGI +DA L+++ G+F +E + + + LQ
Sbjct: 94 AARELEEELGI---RDA------VLREH----GRFFFDEPGNRLWCAVFSAVSDAPLRLQ 140
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+S ++I E LA ++ +PY
Sbjct: 141 AEEISEARFIRPE-----LALEEARSLPY 164
>gi|427393069|ref|ZP_18886972.1| hypothetical protein HMPREF9698_00778 [Alloiococcus otitis ATCC
51267]
gi|425730830|gb|EKU93661.1| hypothetical protein HMPREF9698_00778 [Alloiococcus otitis ATCC
51267]
Length = 173
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E +D+ + G T R E G Y V+ + +S Q +L Q+R + K +WP +W
Sbjct: 2 EKMDLYDGNKRPLGETIGRQEKTGPGTYTLMVHGLLINDSGQ-VLSQKRVETKTNWPSLW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D+S +G + G++S + RE +EELG++L + T Q + +D
Sbjct: 61 DLSCSGAVKTGETSQEALSREFKEELGLDLDLKTTAPILTASYQQGL----------SDY 110
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK-DDPSFVPY 174
YL+ I L + + E+ V+++ + +L A D FVPY
Sbjct: 111 YLLPY--SIDLAGLQIAKDEIQNVQWL---DLADLFAYLDQGRFVPY 152
>gi|383777427|ref|YP_005461993.1| putative NUDIX hydrolase [Actinoplanes missouriensis 431]
gi|381370659|dbj|BAL87477.1| putative NUDIX hydrolase [Actinoplanes missouriensis 431]
Length = 213
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 3 ESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD 62
E V + EH+ +L +G G+ ++ H + +IF +S L+ +RA K
Sbjct: 18 EQVKRVEHVILLNESGAAIGVADKQTVHTDSTPLHLAFSCYIF-DSAGRFLVSQRALSKK 76
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN 122
+WPG+W S GH + G+ + +R ELG+ L D V + DG +
Sbjct: 77 TWPGIWTNSVCGHPAQGEPIADAVRRRASFELGLTL--DEVRLVLPAFRYRAELDG-VVE 133
Query: 123 NEFADVYLVT-TLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
NE V+ T T P P EV AV+++ ++ ++ A+DD ++ P+
Sbjct: 134 NEMCPVFYATVTAEPAP------NPDEVEAVRWMPWDTFR-AEARDD-AYSPW 178
>gi|342309932|gb|AEL21378.1| isopentenyl-diphosphate delta3-delta2-isomerase [Penicillium
brevicompactum]
Length = 270
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H + D++++
Sbjct: 89 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGAELDAAVMG 147
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+AQR+L ELGI +P D FEF FT + +DGK+ +E + + L
Sbjct: 148 VKRAAQRKLDHELGIKTEQVPLDKFEF-FTRIHYKAPSDGKWGEHEVDYILFIQADVDLK 206
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P P EV Y++ +E K + + D F P+
Sbjct: 207 PSP--------NEVRDTTYVSADELKAMFKQPDLKFTPW 237
>gi|339485500|ref|YP_004700028.1| NUDIX hydrolase [Pseudomonas putida S16]
gi|338836343|gb|AEJ11148.1| NUDIX hydrolase [Pseudomonas putida S16]
Length = 179
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 34 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVTAGEAYADS 92
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI+ + F F F Q + N+ + VY + P+ LQ
Sbjct: 93 AARELAEELGIDGVELRFHERFYFDQPD--------NHLWCAVYSAVSDAPL-----RLQ 139
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 140 PEEVIEARFIGLEQ 153
>gi|332290759|ref|YP_004429368.1| isopentenyl-diphosphate delta-isomerase [Krokinobacter sp.
4H-3-7-5]
gi|332168845|gb|AEE18100.1| isopentenyl-diphosphate delta-isomerase, type 1 [Krokinobacter sp.
4H-3-7-5]
Length = 172
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
P+ E H HR + ++F S EL+LQ+RA K PG+W + H G+S++ +
Sbjct: 20 PKMEAHEKAVLHRAFSVFVF-NSKNELMLQQRALHKYHSPGLWTNTCCSHQREGESNIEA 78
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
R LQEE+G ++P E +F+ + ++G + D L+ P +
Sbjct: 79 GMRRLQEEMGFSVP---LEETISFIYKAPFDNG--LTEHELDHILIGHSEQSP----AIN 129
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRY 191
+ EV+A K++ E K +A + P Y + F II ++
Sbjct: 130 EDEVAAWKWMDLENVKTDIA-NHPEL--------YTEWFKIIFDKF 166
>gi|297170851|gb|ADI21870.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured verrucomicrobium HF0130_25O04]
Length = 177
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV+ + G + R VH HR V+ +I + S LLQRR+ KD P +W
Sbjct: 6 ETFDVVDEADRVIG-KESREHVHDRKLLHRAVHVFIQSRS-DHWLLQRRSAQKDIEPLLW 63
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S +GH+ +G+ L SA RE +EELG++L D F + G NEF V
Sbjct: 64 TTSCSGHVDSGEEYLESAVRECKEELGLHL--DPVNIREVFRCSACLETG----NEFVRV 117
Query: 129 YL 130
YL
Sbjct: 118 YL 119
>gi|388857089|emb|CCF49304.1| probable isopentenyl-diphosphate delta-isomerase [Ustilago hordei]
Length = 263
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------I 84
G HR + ++F ++ +LLLQRRA K ++P MW + H A L
Sbjct: 68 GLLHRAFSVFLFDPTSGKLLLQRRAPEKITFPNMWTNTCCSHPLAIKGELEEAEQIGVRR 127
Query: 85 SAQRELQEELGI---NLPKDAFEFV--FTFLQQNVINDGKFINNEFADVYLVT---TLNP 136
+AQR+L ELGI +P D F+++ +L N D + +E + +T TL P
Sbjct: 128 AAQRKLDHELGIPAEQVPLDQFQYLTRIHYLAPNGDEDNIWGEHEIDYILFITANVTLEP 187
Query: 137 IPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDP-SFVPY 174
EV K+++ +E K L+ + DP SF P+
Sbjct: 188 --------NVNEVCDTKWVSPQELKVLMTELDPASFTPW 218
>gi|424513455|emb|CCO66077.1| predicted protein [Bathycoccus prasinos]
Length = 425
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI 76
R H +HR+ + W+F + +L Q+R++ KD++PGMWDIS+AGHI
Sbjct: 108 RKTCHENKVWHRSAHVWVFDKERNRVLCQKRSEKKDTFPGMWDISAAGHI 157
>gi|110637094|ref|YP_677301.1| isopentenyl-diphosphate delta-isomerase [Cytophaga hutchinsonii
ATCC 33406]
gi|110279775|gb|ABG57961.1| isopentenyl-diphosphate delta-isomerase [Cytophaga hutchinsonii
ATCC 33406]
Length = 177
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ E HR G HR + +IF + ELLLQ+RA K P W + H +++L +A
Sbjct: 22 KMEAHRKGLLHRAFSVFIF-NTKGELLLQQRAASKYHSPLKWTNTCCSHQRKNETTLQAA 80
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL-VTTLNPIPLEAFTLQ 145
R +QEE+GI +TF+ + + G F +E V + TT IP
Sbjct: 81 ARRMQEEMGITCN---VSLSYTFIYKADVGQGLF-EHELDHVLIGTTTQTTIP-----FN 131
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ EV AV++ + E+ + ++ + F +
Sbjct: 132 KNEVHAVRFASLEDIEKEMSINPEDFTKW 160
>gi|257869450|ref|ZP_05649103.1| NUDIX family hydrolase [Enterococcus gallinarum EG2]
gi|357051782|ref|ZP_09112948.1| hypothetical protein HMPREF9478_02931 [Enterococcus
saccharolyticus 30_1]
gi|257803614|gb|EEV32436.1| NUDIX family hydrolase [Enterococcus gallinarum EG2]
gi|355379217|gb|EHG26383.1| hypothetical protein HMPREF9478_02931 [Enterococcus
saccharolyticus 30_1]
Length = 125
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E L V Q T T R Y V+ +F E+ ELL+Q+R K WP W
Sbjct: 2 EQLTVYDAQKQPTAATMLRDTPVPNDGYRVVVSVLLFNEAG-ELLIQKRQSTKKGWPSYW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINL 98
D + G + AG+S +A+REL EELG+ L
Sbjct: 61 DYPAGGTVKAGESCYQAAERELLEELGMTL 90
>gi|145240455|ref|XP_001392874.1| isopentenyl-diphosphate Delta-isomerase [Aspergillus niger CBS
513.88]
gi|134077392|emb|CAK40006.1| unnamed protein product [Aspergillus niger]
gi|350629905|gb|EHA18278.1| hypothetical protein ASPNIDRAFT_52621 [Aspergillus niger ATCC 1015]
Length = 271
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 36/163 (22%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H S D++++
Sbjct: 90 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGSQLDAAVLG 148
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEF-------ADVYLV 131
+AQR+L+ ELGI +P D FEF FT + +DGK+ +E ADV L
Sbjct: 149 VKRAAQRKLEHELGIKPEQVPLDKFEF-FTRIHYKAPSDGKWGEHEIDYILFIQADVDL- 206
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+NP EV +Y++ +E K + + F P+
Sbjct: 207 -NVNP----------NEVRDTRYVSADELKQMFEQPGLKFTPW 238
>gi|260869566|ref|YP_003235968.1| isopentenyl diphosphate isomerase [Escherichia coli O111:H- str.
11128]
gi|415818586|ref|ZP_11508308.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli OK1180]
gi|417199862|ref|ZP_12017099.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 4.0522]
gi|417211765|ref|ZP_12022064.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli JB1-95]
gi|417593235|ref|ZP_12243928.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 2534-86]
gi|419198521|ref|ZP_13741818.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC8A]
gi|419204982|ref|ZP_13748155.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC8B]
gi|419222914|ref|ZP_13765830.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC8E]
gi|419228328|ref|ZP_13771175.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9A]
gi|419234081|ref|ZP_13776853.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9B]
gi|419239316|ref|ZP_13782027.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9C]
gi|419244835|ref|ZP_13787470.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9D]
gi|419250650|ref|ZP_13793222.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9E]
gi|419285589|ref|ZP_13827758.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC10F]
gi|419886399|ref|ZP_14407040.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9570]
gi|419892796|ref|ZP_14412803.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9574]
gi|420090029|ref|ZP_14601806.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9602]
gi|420094381|ref|ZP_14605972.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9634]
gi|424773848|ref|ZP_18200899.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CFSAN001632]
gi|257765922|dbj|BAI37417.1| isopentenyl diphosphate isomerase [Escherichia coli O111:H- str.
11128]
gi|323180332|gb|EFZ65884.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli OK1180]
gi|345335327|gb|EGW67766.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 2534-86]
gi|378045066|gb|EHW07472.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC8A]
gi|378046177|gb|EHW08557.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC8B]
gi|378063723|gb|EHW25887.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC8E]
gi|378071573|gb|EHW33642.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9A]
gi|378075888|gb|EHW37902.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9B]
gi|378082510|gb|EHW44455.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9C]
gi|378088797|gb|EHW50647.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9D]
gi|378092519|gb|EHW54341.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC9E]
gi|378129619|gb|EHW90990.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC10F]
gi|386187665|gb|EIH76478.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 4.0522]
gi|386195339|gb|EIH89575.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli JB1-95]
gi|388365604|gb|EIL29387.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9570]
gi|388368957|gb|EIL32577.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9574]
gi|394386749|gb|EJE64232.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9602]
gi|394396231|gb|EJE72607.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CVM9634]
gi|421935346|gb|EKT93038.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O111:H8
str. CFSAN001632]
Length = 182
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + HR ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHRAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRATDPNGIVENEV 117
Query: 126 ADVYLVTT 133
V+ T
Sbjct: 118 CPVFAART 125
>gi|347731009|ref|ZP_08864116.1| NUDIX domain protein [Desulfovibrio sp. A2]
gi|347520210|gb|EGY27348.1| NUDIX domain protein [Desulfovibrio sp. A2]
Length = 236
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
P +E R HR V + ++ + LQ+R K +PG WD+S+ GH+ AG++ +
Sbjct: 72 PITEARRQTLRHRVVLV-MLHDTKGRIYLQKRGATKHLYPGRWDLSATGHVRAGEAREDA 130
Query: 86 AQRELQEELGI 96
AQREL+EELGI
Sbjct: 131 AQRELREELGI 141
>gi|310795124|gb|EFQ30585.1| isopentenyl-diphosphate delta-isomerase [Glomerella graminicola
M1.001]
Length = 257
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGH---ISAGDSSLI------ 84
G HR + ++F + LLLQ+RA K ++P MW + H I S +
Sbjct: 76 GLLHRAFSVFLFDPADNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGSNLEDSVAG 135
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L+ ELGIN +P D F F+ T + +DGK+ +E Y++ +
Sbjct: 136 VKRAAQRKLEHELGINPAQVPFDDFHFL-TRIHYKAPSDGKWGEHEID--YILFIKAKVD 192
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + + EV A +Y++ +E K L F P+
Sbjct: 193 LD---INKNEVQATQYVSADELKKLFQDPSLKFTPW 225
>gi|374598544|ref|ZP_09671546.1| isopentenyl-diphosphate delta-isomerase [Myroides odoratus DSM
2801]
gi|423323216|ref|ZP_17301058.1| isopentenyl-diphosphate delta-isomerase [Myroides odoratimimus CIP
103059]
gi|373910014|gb|EHQ41863.1| isopentenyl-diphosphate delta-isomerase [Myroides odoratus DSM
2801]
gi|404609767|gb|EKB09131.1| isopentenyl-diphosphate delta-isomerase [Myroides odoratimimus CIP
103059]
Length = 203
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE + ++ ++ G T + E H HR + +IF + E++LQ+RA K P +
Sbjct: 31 EEQVILVNEQDEQVG-TMGKQEAHEKALLHRAFSVFIFNDKN-EIMLQQRAAEKYHSPLL 88
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFA 126
W + H G++++ + R L+EE+G + KD F F++ N + + +F
Sbjct: 89 WANTCCSHQRVGETNIEAGARRLREEMGFEVELKDVFHFIYKAPFDNGLTEHEF------ 142
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162
D +V N P T+ EV A K++ EE KN
Sbjct: 143 DHVMVGYYNGEP----TINPEEVEAWKWMGIEEVKN 174
>gi|67516595|ref|XP_658183.1| hypothetical protein AN0579.2 [Aspergillus nidulans FGSC A4]
gi|29468178|gb|AAO85433.1|AF479816_1 isopentenyl diphosphate isomerase [Emericella nidulans]
gi|40747522|gb|EAA66678.1| hypothetical protein AN0579.2 [Aspergillus nidulans FGSC A4]
gi|259489156|tpe|CBF89196.1| TPA: Isopentenyl diphosphate isomerasePutative uncharacterized
protein ; [Source:UniProtKB/TrEMBL;Acc:Q874I0]
[Aspergillus nidulans FGSC A4]
Length = 268
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 36/163 (22%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S LLLQ+RA K ++P MW + H S D++++
Sbjct: 87 GLLHRAFSVFLF-DSQNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGSQLDAAILG 145
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEF-------ADVYLV 131
+AQR+L ELGI +P + FEF FT + +DGK+ +E ADV L
Sbjct: 146 VKRAAQRKLNHELGIKPEEVPIEKFEF-FTRIHYKAPSDGKWGEHEIDYILFIQADVVLE 204
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
LN EV +Y++ +E K + + + F P+
Sbjct: 205 PNLN------------EVRDTRYVSADELKEMFKQTNLKFTPW 235
>gi|300715960|ref|YP_003740763.1| isopentenyl-diphosphate delta-isomerase [Erwinia billingiae Eb661]
gi|299061796|emb|CAX58912.1| Isopentenyl-diphosphate delta-isomerase [Erwinia billingiae Eb661]
Length = 180
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH+ G HR V ++F S +LLLQ+RA K G+W ++ GH +S+ +A+R
Sbjct: 23 EVHQKGLLHRAVTVYVF-NSRHQLLLQQRATGKYHCGGLWSNTTCGHPFPQESTQHAAER 81
Query: 89 ELQEELGINLPKD-AFEFVFTFLQQNVINDGKFINNEFA 126
L+EE+G+ L D AFE + N + + ++ + FA
Sbjct: 82 RLREEMGMRLSLDPAFELSYNLPMGNGLTEHEYGHVFFA 120
>gi|60683104|ref|YP_213248.1| hypothetical protein BF3655 [Bacteroides fragilis NCTC 9343]
gi|265766997|ref|ZP_06094826.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336410493|ref|ZP_08590970.1| hypothetical protein HMPREF1018_02987 [Bacteroides sp. 2_1_56FAA]
gi|375359935|ref|YP_005112707.1| hypothetical protein BF638R_3726 [Bacteroides fragilis 638R]
gi|423251747|ref|ZP_17232760.1| hypothetical protein HMPREF1066_03770 [Bacteroides fragilis
CL03T00C08]
gi|423255068|ref|ZP_17235998.1| hypothetical protein HMPREF1067_02642 [Bacteroides fragilis
CL03T12C07]
gi|423260596|ref|ZP_17241518.1| hypothetical protein HMPREF1055_03795 [Bacteroides fragilis
CL07T00C01]
gi|423266730|ref|ZP_17245732.1| hypothetical protein HMPREF1056_03419 [Bacteroides fragilis
CL07T12C05]
gi|423270223|ref|ZP_17249194.1| hypothetical protein HMPREF1079_02276 [Bacteroides fragilis
CL05T00C42]
gi|423276181|ref|ZP_17255123.1| hypothetical protein HMPREF1080_03776 [Bacteroides fragilis
CL05T12C13]
gi|423285581|ref|ZP_17264463.1| hypothetical protein HMPREF1204_04001 [Bacteroides fragilis HMW
615]
gi|60494538|emb|CAH09337.1| putative NUDIX domain conserved hypothetical protein [Bacteroides
fragilis NCTC 9343]
gi|263253374|gb|EEZ24850.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301164616|emb|CBW24175.1| putative NUDIX domain conserved hypothetical protein [Bacteroides
fragilis 638R]
gi|335944323|gb|EGN06145.1| hypothetical protein HMPREF1018_02987 [Bacteroides sp. 2_1_56FAA]
gi|387775150|gb|EIK37259.1| hypothetical protein HMPREF1055_03795 [Bacteroides fragilis
CL07T00C01]
gi|392649172|gb|EIY42851.1| hypothetical protein HMPREF1066_03770 [Bacteroides fragilis
CL03T00C08]
gi|392652509|gb|EIY46168.1| hypothetical protein HMPREF1067_02642 [Bacteroides fragilis
CL03T12C07]
gi|392697532|gb|EIY90716.1| hypothetical protein HMPREF1080_03776 [Bacteroides fragilis
CL05T12C13]
gi|392698147|gb|EIY91329.1| hypothetical protein HMPREF1079_02276 [Bacteroides fragilis
CL05T00C42]
gi|392699962|gb|EIY93131.1| hypothetical protein HMPREF1056_03419 [Bacteroides fragilis
CL07T12C05]
gi|404579096|gb|EKA83814.1| hypothetical protein HMPREF1204_04001 [Bacteroides fragilis HMW
615]
Length = 176
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 15 TMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSA 73
T+TG T R E H H V+ +F S EL LQ+R ++KD PG WD S
Sbjct: 18 TITGAAT-----RGECHSGSKLLHPVVHLHVF-NSKGELYLQKRPEWKDIQPGKWDTSVG 71
Query: 74 GHISAGDSSLISAQRELQEELGIN 97
GHI G+S I+ +RE+ EELGI
Sbjct: 72 GHIDLGESVEIALKREVAEELGIT 95
>gi|340960303|gb|EGS21484.1| isopentenyl-diphosphate delta-isomerase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 253
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGH---ISAGDSSLI------ 84
G HR + ++F E ELLLQ+RA K ++P MW + H +S S +
Sbjct: 73 GLLHRAFSVFLFNEKN-ELLLQQRASEKITFPNMWTNTCCSHPLNVSNETGSTLEAAILG 131
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L+ ELGI +P + F F+ T + +DGK+ +E D L N
Sbjct: 132 VKHAAQRKLEHELGIKKEQVPLEKFRFL-TRIHYKAPSDGKWGEHEI-DYILFIKANV-- 187
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+ + EV A +Y+ EE K L F P+
Sbjct: 188 --DLNINKNEVQATRYVTPEELKQLFQDPTLKFTPW 221
>gi|431800623|ref|YP_007227526.1| NUDIX hydrolase [Pseudomonas putida HB3267]
gi|430791388|gb|AGA71583.1| NUDIX hydrolase [Pseudomonas putida HB3267]
Length = 178
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 33 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVTAGEAYADS 91
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI+ + F F F Q + N + VY + P+ LQ
Sbjct: 92 AARELAEELGIDGVELRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 138
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 139 PEEVIEARFIGLEQ 152
>gi|388547541|ref|ZP_10150804.1| isopentenyl-diphosphate delta-isomerase [Pseudomonas sp. M47T1]
gi|388274301|gb|EIK93900.1| isopentenyl-diphosphate delta-isomerase [Pseudomonas sp. M47T1]
Length = 198
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G HR + +F ELL+Q+RA K WPG W + H G++ ++ R L+EE
Sbjct: 48 GVLHRAFSLLVFNHQG-ELLVQQRAAGKRLWPGYWSNTCCSHPRRGEALEVAISRRLEEE 106
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LG+ + F F+F F Q D NE VY + +P+ L EVSA++
Sbjct: 107 LGM---RCNFSFLFKF-QYQAQFDAHGAENELCWVY-AGRCDDLPV----LNLNEVSALR 157
Query: 154 YIAYEEYKNLLAKDDPSFVPY 174
Y++ + +A +F P+
Sbjct: 158 YLSPQALDAEMAARPHTFTPW 178
>gi|417933297|ref|ZP_12576623.1| isopentenyl-pyrophosphate Delta-isomerase [Propionibacterium acnes
SK182B-JCVI]
gi|340772201|gb|EGR94711.1| isopentenyl-pyrophosphate Delta-isomerase [Propionibacterium acnes
SK182B-JCVI]
Length = 199
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T PR+ VH + + +LL RRA K +WPG+W S GH G+S +
Sbjct: 33 TAPRATVHSQHTPRHLAFSCHVLDVGGRMLLTRRALTKVAWPGVWTNSCCGHPRVGESII 92
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFT 143
+A R +ELG++L V + G + +EF V + P L
Sbjct: 93 DAAVRRTHQELGLDLDPRRMRVVLPDFSYRATDAGGIVEDEFCPVVVARLSLPEELVELN 152
Query: 144 LQQTEVSAVKYIAYEEYKNLLAKDDPSFV-PYDV 176
EV V ++ +++ LA+ P+ + P+ V
Sbjct: 153 PDPEEVEEVTWVGWQDMY-ALARSMPALLSPWAV 185
>gi|398791354|ref|ZP_10552099.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. YR343]
gi|398215408|gb|EJN01971.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. YR343]
Length = 177
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S E+LLQRRA K G+W + H +S+ +A+R
Sbjct: 23 EVHEKGLLHRAVTVYVF-NSRHEVLLQRRASSKYHCGGLWSNTCCSHPYPQESTRDAAER 81
Query: 89 ELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148
L+EE+G+N+ A VF L N+ +E+ V+ I E L E
Sbjct: 82 RLREEMGMNV---ALTPVFE-LSYNLPLSNGLTEHEYGHVFFA-----ISDEKPVLNPEE 132
Query: 149 VSAVKYIAYEEYKNLLAKDDPSFVPY 174
A Y + + + + ++ F P+
Sbjct: 133 ADAWCYRSIAQIQQEMHENPAQFTPW 158
>gi|313887568|ref|ZP_07821251.1| hydrolase, NUDIX family [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846446|gb|EFR33824.1| hydrolase, NUDIX family [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 162
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E+ DV G+ + E + DYH V WI + ++QRR+ K S+ GMW
Sbjct: 2 EYWDVYDKKGKWKRRVIRKGERLKNSDYHLIVEGWILRDDGN-FIIQRRSLNKKSFAGMW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S+ G + + ++ RE +EELGI++ +D + ++N I
Sbjct: 61 YCSAGGSVISRETPKEGMIREFKEELGIDIREDELKLKRIITEKNTI------------F 108
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
Y+ + L+ +Q+ EV V + E+ + ++ +D +F+ D
Sbjct: 109 YIFLVRKNVSLDEIVMQEEEVMDVDIASVEKIQQMI--EDKTFIGLD 153
>gi|297182062|gb|ADI18236.1| NTP pyrophosphohydrolases including oxidative damage repair enzymes
[uncultured gamma proteobacterium HF0200_40H22]
Length = 175
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
M+ + E L V+ T G + R ++HR+ HR ++ +F + LQ+RA
Sbjct: 1 MSRAAEDAEILSVVDSTDSVIGENR-RDKIHRLRLRHRAIHVLVF-NPQGAVFLQKRALH 58
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINL---PKDAFEFVFTFLQQNVIND 117
K PGMWD S AGH+ AG++ RE++EE+G+ L P F+ T
Sbjct: 59 KQENPGMWDSSVAGHVDAGENYDECCVREIEEEVGLVLDRVPPRLFKLEAT--------- 109
Query: 118 GKFINNEFADVYLVTT 133
+ EFA VY V T
Sbjct: 110 -EVTGMEFAWVYRVDT 124
>gi|294775853|ref|ZP_06741353.1| hydrolase, NUDIX family [Bacteroides vulgatus PC510]
gi|294450313|gb|EFG18813.1| hydrolase, NUDIX family [Bacteroides vulgatus PC510]
Length = 166
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
+EE ++ G TG R E H H V+ +F S EL LQ+R D+KD P
Sbjct: 6 KEEMFPIVDEQGNITGAAT-RGECHNGSKLLHPVVHLHVF-NSKGELYLQKRPDWKDIQP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGI 96
G WD + GHI G++ + +RE++EELGI
Sbjct: 64 GKWDTAVGGHIDLGENVETALKREVKEELGI 94
>gi|452880882|ref|ZP_21957781.1| hypothetical protein G039_33002 [Pseudomonas aeruginosa VRFPA01]
gi|452182766|gb|EME09784.1| hypothetical protein G039_33002 [Pseudomonas aeruginosa VRFPA01]
Length = 178
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL +QRR K +PG WD+++ G + AG++ S
Sbjct: 35 PRAELRTRGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEAYAES 93
Query: 86 AQRELQEELGI-NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
A REL+EELGI ++P L+++ G+F+ +E + + + L
Sbjct: 94 AARELEEELGIRDVP----------LREH----GRFLFDEPGNRLWCVVYSAVSDAPLRL 139
Query: 145 QQTEVSAVKYI----AYEEYKNL 163
Q E+S ++I A EE ++L
Sbjct: 140 QPEEISEARFIRPERALEEARSL 162
>gi|436842309|ref|YP_007326687.1| NUDIX hydrolase [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432171215|emb|CCO24586.1| NUDIX hydrolase [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 171
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
M ++++Q E +D + I EVHR HR+V I+ S +L LQ+R+
Sbjct: 1 MKKNIIQVEAVD----KNNRPIIVMDIDEVHRQSLRHRSVVVLIY-NSEGKLYLQKRSAN 55
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
K + G W++S++GH+ +G+S +A REL+ ELG+ L + I
Sbjct: 56 KTLYSGRWNVSASGHVLSGESLENAALRELKNELGL------VNGNIRLLDE--IEASSE 107
Query: 121 INNEFADVYLVTTLNPIPL-------EAFTLQQTEVSAVKYIAYEEYKNLLA 165
EF VY++ +N IP F ++E+ Y EY+ LLA
Sbjct: 108 TGYEFITVYVLDKINTIPAPNPEEVESGFYYSESEL----YWMIREYRELLA 155
>gi|395446959|ref|YP_006387212.1| NUDIX hydrolase [Pseudomonas putida ND6]
gi|397696476|ref|YP_006534359.1| NUDIX hydrolase [Pseudomonas putida DOT-T1E]
gi|388560956|gb|AFK70097.1| NUDIX hydrolase [Pseudomonas putida ND6]
gi|397333206|gb|AFO49565.1| NUDIX hydrolase [Pseudomonas putida DOT-T1E]
Length = 178
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 34 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVTAGEAYAES 92
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI + F F F Q + N + VY + P+ LQ
Sbjct: 93 AARELAEELGIEGAELRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 139
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 140 PEEVIEARFIGLEQ 153
>gi|383116225|ref|ZP_09936977.1| hypothetical protein BSHG_3278 [Bacteroides sp. 3_2_5]
gi|251945408|gb|EES85846.1| hypothetical protein BSHG_3278 [Bacteroides sp. 3_2_5]
Length = 176
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 15 TMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSA 73
T+TG T R E H H V+ +F S EL LQ+R ++KD PG WD S
Sbjct: 18 TITGAAT-----RGECHSGSKLLHPVVHLHVF-NSKGELYLQKRPEWKDIQPGKWDTSVG 71
Query: 74 GHISAGDSSLISAQRELQEELGIN 97
GHI G+S I+ +RE+ EELGI
Sbjct: 72 GHIDLGESVEIALKREVAEELGIT 95
>gi|148545854|ref|YP_001265956.1| NUDIX hydrolase [Pseudomonas putida F1]
gi|421524779|ref|ZP_15971400.1| NUDIX hydrolase [Pseudomonas putida LS46]
gi|148509912|gb|ABQ76772.1| NUDIX hydrolase [Pseudomonas putida F1]
gi|402751242|gb|EJX11755.1| NUDIX hydrolase [Pseudomonas putida LS46]
Length = 177
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 33 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVTAGEAYAES 91
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI + F F F Q + N + VY + P+ LQ
Sbjct: 92 AARELAEELGIEGAELRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 138
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 139 PEEVIEARFIGLEQ 152
>gi|336172972|ref|YP_004580110.1| isopentenyl-diphosphate delta-isomerase [Lacinutrix sp. 5H-3-7-4]
gi|334727544|gb|AEH01682.1| Isopentenyl-diphosphate Delta-isomerase [Lacinutrix sp. 5H-3-7-4]
Length = 179
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE + ++ ++ G+ P+ E H HR + ++F + EL+LQ+RA K PG+
Sbjct: 3 EEKVILVNEKDEQIGLM-PKMEAHEKALLHRAFSVFVFNDDN-ELMLQQRALDKYHSPGL 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + H G+S+L + +R LQEE+G + E +F+ + ++G + D
Sbjct: 61 WTNTCCSHQREGESNLAAGKRRLQEEMGF---ETELEEKTSFIYKAPFDNG--LTEHELD 115
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+V T N P + ++EV+A K++ E K
Sbjct: 116 HIMVGTYNKEP----NINKSEVAAWKWMPLEAVK 145
>gi|319642366|ref|ZP_07997020.1| NTP pyrophosphohydrolase [Bacteroides sp. 3_1_40A]
gi|345520864|ref|ZP_08800213.1| hypothetical protein BSFG_03947 [Bacteroides sp. 4_3_47FAA]
gi|423314967|ref|ZP_17292899.1| hypothetical protein HMPREF1058_03511 [Bacteroides vulgatus
CL09T03C04]
gi|254837489|gb|EET17798.1| hypothetical protein BSFG_03947 [Bacteroides sp. 4_3_47FAA]
gi|317385981|gb|EFV66906.1| NTP pyrophosphohydrolase [Bacteroides sp. 3_1_40A]
gi|392680656|gb|EIY74022.1| hypothetical protein HMPREF1058_03511 [Bacteroides vulgatus
CL09T03C04]
Length = 166
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
+EE ++ G TG R E H H V+ +F S EL LQ+R D+KD P
Sbjct: 6 KEEMFPIVDEQGNITGAAT-RGECHNGSKLLHPVVHLHVF-NSKGELYLQKRPDWKDIQP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGI 96
G WD + GHI G++ + +RE++EELGI
Sbjct: 64 GKWDTAVGGHIDLGENVETALKREVKEELGI 94
>gi|6225529|sp|O42641.1|IDI1_PHARH RecName: Full=Isopentenyl-diphosphate Delta-isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase; Short=IPP
isomerase
gi|2687843|emb|CAA75796.1| isopentenyl diphosphate:dimethylallyl diphosphate isomerase
[Xanthophyllomyces dendrorhous]
Length = 251
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------ISAQ 87
HR + ++F S LLLQRRAD K ++PGMW + H + + +A
Sbjct: 66 HRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAAS 125
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L+ ELG+ + P D+F ++ T + +DG + +E + TT P E T
Sbjct: 126 RKLEHELGVPTSSTPPDSFTYL-TRIHYLAPSDGLWGEHEIDYILFSTT----PTE-HTG 179
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
EVS +Y+ E + + + SF P+
Sbjct: 180 NPNEVSDTRYVTKPELQAMFEDESNSFTPW 209
>gi|371591315|gb|AEX55019.1| isopentenyl-diphosphate delta-isomerase [Dokdonia sp. PRO95]
Length = 172
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
P+ E H HR + ++F + EL+LQ+RA K PG+W + H G+S++ +
Sbjct: 20 PKMEAHEKAVLHRAFSVFVF-NNKNELMLQQRALHKYHSPGLWTNTCCSHQREGESNVDA 78
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
R LQEE+G ++P E +F+ + ++G + D L+ P+ +
Sbjct: 79 GMRRLQEEMGFSVP---LEETISFIYKAPFDNG--LTEHELDHILIGHSEQSPV----IN 129
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRY 191
+ EV+A K++ E+ K +A + P Y + F II ++
Sbjct: 130 EDEVAAWKWMDLEDVKTDIA-NHPEL--------YTEWFKIIFDKF 166
>gi|317494497|ref|ZP_07952910.1| isopentenyl-diphosphate delta-isomerase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316917427|gb|EFV38773.1| isopentenyl-diphosphate delta-isomerase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 169
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 30 VHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRE 89
VH+ G HR ++ ++F + QELLLQRRA K G W + GH G+ + +A R
Sbjct: 22 VHQQGLLHRAISVYVFNDH-QELLLQRRAVGKYHAGGQWSNTCCGHPFPGEDTQEAAMRR 80
Query: 90 LQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148
L +E+G+ ++FE L + G I +E A V++ + N +P L E
Sbjct: 81 LYQEMGMACALHESFE-----LSYRLDVGGGLIEHELAHVFIGHS-NVVP----QLNSEE 130
Query: 149 VSAVKYIAYEEYKNLLAKDDPSFVPY 174
A Y EE +A + F P+
Sbjct: 131 ADAFAYHPLEEIIEQMALEPERFTPW 156
>gi|167031626|ref|YP_001666857.1| NUDIX hydrolase [Pseudomonas putida GB-1]
gi|166858114|gb|ABY96521.1| NUDIX hydrolase [Pseudomonas putida GB-1]
Length = 178
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 33 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVAAGEAYAES 91
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI + F F F Q + N + VY + P+ LQ
Sbjct: 92 AARELAEELGIEGAQLRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 138
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 139 PEEVIEARFIGLEQ 152
>gi|295110500|emb|CBL24453.1| ADP-ribose pyrophosphatase [Ruminococcus obeum A2-162]
Length = 167
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 9 EHLDVLTMTGQKTGITKPRSE-VHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
E+ D+ + TG T R++ + G+YH TV + A + L+ +R K PG
Sbjct: 2 EYWDIYDRDKKPTGRTMKRNDWCLKDGEYHLTVLG-VVARPDHKFLITKRVMTKAWAPGC 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W++S G AG+ SL + RE++EE G++ ++FT+ ++N +G +N F D
Sbjct: 61 WEVS-GGAAQAGEESLEAVLREVKEETGLDARDAGGGYLFTYKRENP-GEG---DNYFVD 115
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYD 175
VY + + E LQ+ E + +E K A+D F+ YD
Sbjct: 116 VYRF--IMDVKDEDLHLQEAETDGHMFATLDEIKAFAAED--KFLHYD 159
>gi|116052989|ref|YP_793307.1| hypothetical protein PA14_64010 [Pseudomonas aeruginosa UCBPP-PA14]
gi|421177095|ref|ZP_15634752.1| hypothetical protein PACI27_5310 [Pseudomonas aeruginosa CI27]
gi|115588210|gb|ABJ14225.1| putative isopentenyldiphosphate isomerase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404530183|gb|EKA40196.1| hypothetical protein PACI27_5310 [Pseudomonas aeruginosa CI27]
Length = 178
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+++ G R +F S EL +QRR K +PG WD+++ G + AG+ S
Sbjct: 35 PRADLRERGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGYWDLAAGGMVQAGEPYADS 93
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL+EELGI +DA L+++ G+F +E + + + LQ
Sbjct: 94 AARELEEELGI---RDA------VLREH----GRFFFDEPGNRLWCAVFSAVSDAPLRLQ 140
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E+S ++I E LA ++ +PY
Sbjct: 141 AEEISEARFIRPE-----LALEEARSLPY 164
>gi|3790386|dbj|BAA33979.1| IPP isomerase [Xanthophyllomyces dendrorhous]
gi|81239119|gb|ABB60087.1| isopentenyl diphosphate isomerase [Xanthophyllomyces dendrorhous]
Length = 251
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------ISAQ 87
HR + ++F S LLLQRRAD K ++PGMW + H + + +A
Sbjct: 66 HRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVEEENQIGVRRAAS 125
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L+ ELG+ + P D+F ++ T + +DG + +E + TT P E T
Sbjct: 126 RKLEHELGVPTSSTPPDSFTYL-TRIHYLAPSDGLWGEHEIDYILFSTT----PTE-HTG 179
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
EVS +Y+ E + + + SF P+
Sbjct: 180 NPNEVSDTRYVTKPELQAMFEDESNSFTPW 209
>gi|26987303|ref|NP_742728.1| NUDIX hydrolase [Pseudomonas putida KT2440]
gi|24981950|gb|AAN66192.1|AE016247_2 IPP isomerase type 1 family protein [Pseudomonas putida KT2440]
Length = 177
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 33 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVAAGEAYAES 91
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI + F F F Q + N + VY + P+ LQ
Sbjct: 92 AARELAEELGIEGAELRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 138
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 139 PEEVIEARFIGLEQ 152
>gi|443900064|dbj|GAC77391.1| isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase
[Pseudozyma antarctica T-34]
Length = 293
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 34/175 (19%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------I 84
G HR + ++F + +LLLQRRA K ++P MW + H A L
Sbjct: 101 GLLHRAFSVFLFDPESGKLLLQRRAAEKITFPNMWTNTCCSHPLAIKGELEEAEQIGVRR 160
Query: 85 SAQRELQEELGI---NLPKDAFEFV--FTFLQQNVINDGKFINNEFADVYLVTTLNPIPL 139
+AQR+L ELGI +P D F+++ +L N +D D L T N
Sbjct: 161 AAQRKLDHELGIPAEQVPLDEFQYLTRIHYLAANGQDD--IWGEHEIDYILFITAN---- 214
Query: 140 EAFTLQQ--TEVSAVKYIAYEEYKNLLAKDDP-SFVPYDVNGGYGQLFNIISQRY 191
TLQ EV K+++ EE K L+ + DP SF P+ F +I Q++
Sbjct: 215 --VTLQPNLNEVCDTKWVSPEELKALMTELDPASFTPW---------FKLIVQKF 258
>gi|329960191|ref|ZP_08298633.1| hydrolase, NUDIX family [Bacteroides fluxus YIT 12057]
gi|328532864|gb|EGF59641.1| hydrolase, NUDIX family [Bacteroides fluxus YIT 12057]
Length = 169
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG R E H H ++ +F S EL LQ+R ++KD PG
Sbjct: 7 QEMFPLVDEQGNITG-AATRGECHNGSKMLHPVIHLHVF-NSKGELYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD S GH+ G+S ++ +RE++EELGI P+ +VF
Sbjct: 65 KWDTSVGGHVDLGESVEMALKREVREELGITDFTPETVMHYVF 107
>gi|398798584|ref|ZP_10557883.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. GM01]
gi|398100491|gb|EJL90730.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pantoea sp. GM01]
Length = 177
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S E+LLQRRA K G+W + H +S+ +A+R
Sbjct: 23 EVHEKGLLHRAVTVYVF-NSRHEVLLQRRASGKYHCGGLWSNTCCSHPYPQESTRDAAER 81
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQT 147
L+EE+G+ L FE + N + + +E+ V+ I E L
Sbjct: 82 RLREEMGMKLTLTPVFELSYNLPLSNGLTE-----HEYGHVFFA-----ISDEQPVLNPE 131
Query: 148 EVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E A Y + + + +A++ F P+
Sbjct: 132 EADAWCYRSIAQIQQEMAENPEQFTPW 158
>gi|374316674|ref|YP_005063102.1| isopentenyldiphosphate isomerase [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352318|gb|AEV30092.1| isopentenyldiphosphate isomerase [Sphaerochaeta pleomorpha str.
Grapes]
Length = 194
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G YH V+ W + E+LL R+ KD +P W+ ++AG + AG++S A REL EE
Sbjct: 46 GTYHLVVSIWT-VNANNEILLTLRSPAKDLFPNYWE-TTAGAVLAGETSKQGAARELFEE 103
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
GI + +D F+ T N+ K N F D+++ I LQ+ E K
Sbjct: 104 TGIVVSEDELVFLET-------NEKK---NAFVDLFIAQ--KDIKCTDIVLQEGETVDAK 151
Query: 154 YIAYEEYKNLLAKDDPSF 171
+++ E + ++ + + +F
Sbjct: 152 WVSVHELERIIKRGELAF 169
>gi|345869985|ref|ZP_08821940.1| Isopentenyl-diphosphate Delta-isomerase [Thiorhodococcus drewsii
AZ1]
gi|343922372|gb|EGV33074.1| Isopentenyl-diphosphate Delta-isomerase [Thiorhodococcus drewsii
AZ1]
Length = 190
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 3 ESVVQEEHLDVLTMTGQKTGI--TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
E + Q+E L+ L + ++ T + E HR G HR + +F ++ LLLQRRAD
Sbjct: 15 ERLSQQESLEQLILVDEQDLPLGTAGKFEAHREGQLHRAFSILVF-DAEDRLLLQRRADC 73
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLP 99
K + W + GH +S+ ++A R L+EE GI +P
Sbjct: 74 KYHFATRWSNTCCGHPRPEESTSVAAGRRLKEEFGIRVP 112
>gi|253687937|ref|YP_003017127.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754515|gb|ACT12591.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 179
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 19 QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISA 78
+ TG+ + + E H G HR + +IF S Q+LLLQ+RA+ K G+W + H +
Sbjct: 14 KPTGVME-KQEAHVKGALHRAITVYIF-NSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAP 71
Query: 79 GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT----- 133
+ +L +A R L EE+G+ + +FT + +++G I +E VY T
Sbjct: 72 SEETLQAAHRRLYEEMGL---RCELTPMFTLTYRLPLDNG-LIEHELGHVYFGVTDDLPQ 127
Query: 134 LNPIPLEAFTLQ 145
+NP + ++ Q
Sbjct: 128 INPDEVSSYEYQ 139
>gi|224025653|ref|ZP_03644019.1| hypothetical protein BACCOPRO_02393 [Bacteroides coprophilus DSM
18228]
gi|224018889|gb|EEF76887.1| hypothetical protein BACCOPRO_02393 [Bacteroides coprophilus DSM
18228]
Length = 165
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
EE ++ G TG R E H H V+ +F S EL LQ+R D+KD PG
Sbjct: 6 EEMFPLVDEEGNITGAAT-RGECHNGSKLLHPVVHLHVF-NSQGELYLQKRPDWKDIQPG 63
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD + GH+ G+S ++ +RE +EELGI P+ +VF
Sbjct: 64 KWDTAVGGHVDLGESVEMALKREAREELGITDFTPERLMHYVF 106
>gi|53715169|ref|YP_101161.1| NTP pyrophosphohydrolase [Bacteroides fragilis YCH46]
gi|52218034|dbj|BAD50627.1| putative NTP pyrophosphohydrolase [Bacteroides fragilis YCH46]
Length = 176
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 15 TMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSA 73
T+TG T R E H H V+ +F S EL LQ+R ++KD PG WD S
Sbjct: 18 TITGAAT-----RGECHSGSKLLHPVVHLHVF-NSKGELYLQKRPEWKDIQPGKWDTSVG 71
Query: 74 GHISAGDSSLISAQRELQEELGIN 97
GHI G+S I+ +RE+ EELGI
Sbjct: 72 GHIDLGESLEIALKREVAEELGIT 95
>gi|152986742|ref|YP_001350882.1| hypothetical protein PSPA7_5561 [Pseudomonas aeruginosa PA7]
gi|150961900|gb|ABR83925.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 178
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL +QRR K +PG WD+++ G + AG++ S
Sbjct: 35 PRAELRTRGLIGRGTFILLF-NSAGELCVQRRTLSKAVYPGHWDLAAGGMVQAGEAYAES 93
Query: 86 AQRELQEELGI-NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
A REL+EELGI ++P L+++ G+F+ +E + + + L
Sbjct: 94 AARELEEELGIRDVP----------LREH----GRFLFDEPGNRLWCVVYSAVSDAPLRL 139
Query: 145 QQTEVSAVKYI----AYEEYKNL 163
Q E+S ++I A EE ++L
Sbjct: 140 QPEEISEARFIRPERALEEARSL 162
>gi|451946589|ref|YP_007467184.1| isopentenyldiphosphate isomerase [Desulfocapsa sulfexigens DSM
10523]
gi|451905937|gb|AGF77531.1| isopentenyldiphosphate isomerase [Desulfocapsa sulfexigens DSM
10523]
Length = 165
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE + ++ +T + PR + G HR +F E +EL LQ+R KD +P
Sbjct: 6 EEIVQIVDRNNMETEVV-PRRIMREQGLIHRASYILVFNEQ-KELFLQKRTATKDLYPSC 63
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGI 96
WD+++ G + AG+S SA REL EELG+
Sbjct: 64 WDVAAGGVVLAGESYEESAHRELAEELGV 92
>gi|307543997|ref|YP_003896476.1| hypothetical protein HELO_1408 [Halomonas elongata DSM 2581]
gi|307216021|emb|CBV41291.1| hypothetical protein HELO_1408 [Halomonas elongata DSM 2581]
Length = 184
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ +E + ++ + G + PR+ + R +HR + + EL +QRR +K+ +P
Sbjct: 17 ISDESIQLVDARNRPCG-SAPRATMRRYCFWHRATYI-VVRNARGELCVQRRTLYKEVFP 74
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGI-NLP-KDAFEFVFTFLQQNVINDGKFINN 123
G D+++ G + AG++ ++A+REL EELGI +P + EFV +G N+
Sbjct: 75 GGIDLAAGGVVGAGEAVHVAARRELAEELGIVGVPLRHVLEFVHA-------RNG---NH 124
Query: 124 EFADVYLVTTLNPIPLEA 141
F YLV P+ L+A
Sbjct: 125 IFGSAYLVDYDGPLVLQA 142
>gi|225163504|ref|ZP_03725817.1| NUDIX hydrolase [Diplosphaera colitermitum TAV2]
gi|224801880|gb|EEG20163.1| NUDIX hydrolase [Diplosphaera colitermitum TAV2]
Length = 191
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 23/120 (19%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
R+EVHR HR+++ +F + + + LQ+R+ KD+ PG W S +GH+ AG+ +
Sbjct: 43 RAEVHRQKLLHRSIHVLVFDRACR-VFLQKRSLAKDTAPGCWASSCSGHVDAGEDYDQAV 101
Query: 87 QRELQEELGINLP-------------KDAFEFVFTF---------LQQNVINDGKFINNE 124
REL EE+GI + + +EFV+ + L I+DG++ E
Sbjct: 102 VRELAEEIGITVTAPPPRWHRAGPCRETGWEFVWVYRLEHEGPFVLHPAEIDDGRWFTRE 161
>gi|365835127|ref|ZP_09376556.1| isopentenyl-diphosphate delta-isomerase [Hafnia alvei ATCC 51873]
gi|364567055|gb|EHM44728.1| isopentenyl-diphosphate delta-isomerase [Hafnia alvei ATCC 51873]
Length = 169
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 30 VHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRE 89
VH+ G HR ++ ++F + QELLLQRRA K G W + GH G+ + +A R
Sbjct: 22 VHQQGLLHRAISVYVFNDH-QELLLQRRAVGKYHAGGQWSNTCCGHPFPGEDTQEAAMRR 80
Query: 90 LQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148
L +E+G+ ++FE L+ + G I +E A V++ + N +P L E
Sbjct: 81 LYQEMGMACALHESFE-----LRYRLDVGGGLIEHELAHVFIGHS-NVVP----QLNSEE 130
Query: 149 VSAVKYIAYEEYKNLLAKDDPSFVPY 174
A Y +E +A + F P+
Sbjct: 131 ADAFAYHPLDEIIEQMAMEPERFTPW 156
>gi|307108227|gb|EFN56468.1| hypothetical protein CHLNCDRAFT_22214, partial [Chlorella
variabilis]
Length = 94
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGD--YHRTVNAWIFAESTQELLLQRRADFKDSW 64
++E +++ G G T+ RS VHR G HR V W+F LL+QRR+ K
Sbjct: 5 EQELFELVDEAGNTLG-TELRSVVHRKGASLLHRAVYVWVF-RPDGALLIQRRSPLKQIG 62
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGI 96
PG D+S A H+ G++ + A R L EELGI
Sbjct: 63 PGQLDLSVAEHLQPGENYVQGAVRGLAEELGI 94
>gi|383114240|ref|ZP_09935005.1| hypothetical protein BSGG_1586 [Bacteroides sp. D2]
gi|313694051|gb|EFS30886.1| hypothetical protein BSGG_1586 [Bacteroides sp. D2]
Length = 172
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E V+ G TG R E H H V+ IF + EL LQ+R ++KD PG
Sbjct: 7 QEMFPVVDEQGNITGAAT-RGECHSGSKLLHPVVHLHIF-NTRGELYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD + GHI G+S I+ +RE++EELGI +P+ ++F
Sbjct: 65 KWDTAVGGHIDLGESVEIALKREVREELGITDFIPELLTNYIF 107
>gi|229828052|ref|ZP_04454121.1| hypothetical protein GCWU000342_00101 [Shuttleworthia satelles DSM
14600]
gi|229792646|gb|EEP28760.1| hypothetical protein GCWU000342_00101 [Shuttleworthia satelles DSM
14600]
Length = 177
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 1 MAESVVQEEHLDVLTMTGQKTG-ITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRAD 59
MAE +EE+ DV + TG + K GDYH TV I L+ +RA
Sbjct: 8 MAE---KEEYWDVYDRDKKLTGRVMKKNDWTMAEGDYHLTVLG-ILQNRAGRYLITKRAR 63
Query: 60 FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGK 119
K PG W+I G + AG++SL + QREL EE GI++ F+F + ++ D
Sbjct: 64 DKAWAPGDWEIPGGG-VMAGETSLEAVQRELLEETGIDVRGAEGGFLFDYHRE----DPH 118
Query: 120 FINNEFADVY 129
NN F DVY
Sbjct: 119 EANNYFVDVY 128
>gi|226944169|ref|YP_002799242.1| isopentenyl-diphosphate delta-isomerase [Azotobacter vinelandii DJ]
gi|226719096|gb|ACO78267.1| isopentenyl-diphosphate delta-isomerase, type 1 [Azotobacter
vinelandii DJ]
Length = 213
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 3 ESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD 62
E +E L ++ ++ G S G HR + ++F ELLLQ+RA K
Sbjct: 34 EVSFNDEPLVLVDAHDREIGFLDKASAHQGQGLLHRAFSLFVF-NRRGELLLQQRAAGKR 92
Query: 63 SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN 122
WPG W + H G++ + +R L EEL + +F+F F Q D +
Sbjct: 93 LWPGFWSNTCCSHPRRGETLDEAVERRLNEELSMQC---KLQFLFKFEYQAQF-DAEGAE 148
Query: 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+E VY + EA +L EVSA++YI+ E +A+ F P+
Sbjct: 149 HELCSVYAGRS-----DEAPSLNLNEVSALRYISPEALDAEMAEHPQRFTPW 195
>gi|302873407|ref|YP_003842040.1| NUDIX hydrolase [Clostridium cellulovorans 743B]
gi|307688422|ref|ZP_07630868.1| NUDIX hydrolase [Clostridium cellulovorans 743B]
gi|302576264|gb|ADL50276.1| NUDIX hydrolase [Clostridium cellulovorans 743B]
Length = 166
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G+YH V+ W S ++L+ +R K + G+W+ + G + G+ S+I A REL+EE
Sbjct: 28 GEYHLVVDIWTI-NSDGKILIDKRHSSK-KFGGLWE-CTGGSVIKGEDSVIGALRELEEE 84
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LGI + + + L + + F D Y++ I L + LQ EV+ V+
Sbjct: 85 LGIKATAEELILIHSIL----------LEDRFVDTYILK--KDIDLNSLVLQADEVTEVR 132
Query: 154 YIAYEEYKNL 163
++ + L
Sbjct: 133 FVTLNQLDEL 142
>gi|269794595|ref|YP_003314050.1| isopentenyl-diphosphate delta-isomerase [Sanguibacter keddieii DSM
10542]
gi|269096780|gb|ACZ21216.1| isopentenyl-diphosphate delta-isomerase [Sanguibacter keddieii DSM
10542]
Length = 196
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
++H+ +L G + G T PR+ VH + H + ++ Q +LL RRA K +WPG
Sbjct: 20 DDHVILLAEDGTRIGHT-PRATVHGLDTPLHLAFSCYLLRADGQ-VLLTRRALAKRTWPG 77
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFA 126
+W S GH G+ + +R ELG+ + D E V + ++ + NE
Sbjct: 78 VWTNSFCGHPRFGEEMSDAVRRHAAHELGLEV--DGIELVLPDFRYRAVDASGVVENEIC 135
Query: 127 DVYLVTTL---NPIPLEAFTLQQTEV 149
V+ TT P P E L T +
Sbjct: 136 PVFFATTTQDPQPNPDEVMDLAWTSM 161
>gi|325298762|ref|YP_004258679.1| NUDIX hydrolase [Bacteroides salanitronis DSM 18170]
gi|324318315|gb|ADY36206.1| NUDIX hydrolase [Bacteroides salanitronis DSM 18170]
Length = 166
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWP 65
++E ++ G TG R E H H V+ +F S EL LQRR +KD P
Sbjct: 6 EKEMFPIVDEEGNITG-AATRGECHNGSKLLHPVVHLHVF-NSRGELFLQRRPAWKDIQP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
G WD S GHI G+S+ ++ RE +EELGI P+ +VF
Sbjct: 64 GKWDTSVGGHIDLGESAEMALIREAREELGITGFTPQLLTHYVF 107
>gi|424737338|ref|ZP_18165791.1| MutT/NUDIX family protein [Lysinibacillus fusiformis ZB2]
gi|422948620|gb|EKU42998.1| MutT/NUDIX family protein [Lysinibacillus fusiformis ZB2]
Length = 166
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEEL 94
DYH V+ WI + LL +R + +P +W+ G I AG+SSL A RE++EE+
Sbjct: 28 DYHIVVHVWICNNKGKFLLTKRHPN--KHYPHLWE-CPGGSIMAGESSLDGAIREVEEEI 84
Query: 95 GINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKY 154
GI+L + + V + + + N+F DV+L I + LQ+ EV+AV++
Sbjct: 85 GISLLRTNGQLVKS--------ERRDCFNDFYDVWLFE--QSIEICDTMLQEEEVTAVQW 134
Query: 155 IAYEEYKNLL 164
+ E + +L
Sbjct: 135 VTKLELEKML 144
>gi|365101367|ref|ZP_09331997.1| isopentenyl-diphosphate Delta-isomerase [Citrobacter freundii
4_7_47CFAA]
gi|363646917|gb|EHL86146.1| isopentenyl-diphosphate Delta-isomerase [Citrobacter freundii
4_7_47CFAA]
Length = 182
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++EH+ +L Q G + + H + WIF E Q LL+ RR+ K +WP
Sbjct: 1 MRQEHVILLNEQDQPCGTLEKYAAHTATTPLHSAFSCWIFNEQGQ-LLVTRRSLHKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G++ + R + ELG ++ D+ V+ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGETHEDAIVRRARFELGADI--DSLSPVYADFRYRATDPSGIVENEV 117
Query: 126 ADVY---LVTTLNPIPLEAFTLQQTEVSAV 152
VY +V+ L P E Q + + V
Sbjct: 118 CPVYAAHIVSELQLNPDEVMDCQWSSLEDV 147
>gi|115397277|ref|XP_001214230.1| isopentenyl-diphosphate delta-isomerase [Aspergillus terreus
NIH2624]
gi|114192421|gb|EAU34121.1| isopentenyl-diphosphate delta-isomerase [Aspergillus terreus
NIH2624]
Length = 263
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 36/163 (22%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H + D++++
Sbjct: 82 GLLHRAFSVFLF-DSNKRLLLQQRATEKITFPDMWTNTCCSHPLGVPGETGAELDAAVLG 140
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEF-------ADVYLV 131
+AQR+L ELGI +P D FEF FT + +DGK+ +E ADV L
Sbjct: 141 VKRAAQRKLNHELGIKPEQVPIDKFEF-FTRIHYKAPSDGKWGEHEIDYILFIQADVDLD 199
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
LN EV +Y++ +E K + + F P+
Sbjct: 200 VNLN------------EVRDTRYVSADELKQMFEQPGLKFTPW 230
>gi|386010233|ref|YP_005928510.1| NUDIX hydrolase [Pseudomonas putida BIRD-1]
gi|313496939|gb|ADR58305.1| NUDIX hydrolase [Pseudomonas putida BIRD-1]
Length = 178
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 33 PRAELRERGLIGRCTFILLF-NSAGELCVHRRTLSKALYPGYWDVAAGGMVTAGEAYAES 91
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI F F F Q + N + VY + P+ LQ
Sbjct: 92 AARELAEELGIEGADLRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 138
Query: 146 QTEVSAVKYIAYEE 159
EV ++I E+
Sbjct: 139 PEEVIEARFIGLEQ 152
>gi|152995151|ref|YP_001339986.1| NUDIX hydrolase [Marinomonas sp. MWYL1]
gi|150836075|gb|ABR70051.1| NUDIX hydrolase [Marinomonas sp. MWYL1]
Length = 178
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR ++ DYHR +F + LL+Q+R D K P + +++ G + G+S + S
Sbjct: 22 PRRLMNFGRDYHRVTYILVFNPAGN-LLIQKRTDDKAFCPSFYGVTTGGVVEKGESYIDS 80
Query: 86 AQRELQEELGINLPKDAFEFVFT 108
A RELQEELG + P ++ FT
Sbjct: 81 AHRELQEELGFDAPLESQGMFFT 103
>gi|110643037|ref|YP_670767.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 536]
gi|191173261|ref|ZP_03034792.1| isopentenyl-diphosphate delta-isomerase, type 1 [Escherichia coli
F11]
gi|300995680|ref|ZP_07181208.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli MS 200-1]
gi|419916086|ref|ZP_14434417.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli KD1]
gi|422376977|ref|ZP_16457223.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli MS 60-1]
gi|432472196|ref|ZP_19714236.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE206]
gi|432714609|ref|ZP_19949639.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE8]
gi|433079043|ref|ZP_20265565.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE131]
gi|123147744|sp|Q0TDW3.1|IDI_ECOL5 RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|110344629|gb|ABG70866.1| Isopentenyl-diphosphate delta-isomerase [Escherichia coli 536]
gi|190906512|gb|EDV66120.1| isopentenyl-diphosphate delta-isomerase, type 1 [Escherichia coli
F11]
gi|300304788|gb|EFJ59308.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli MS 200-1]
gi|324011762|gb|EGB80981.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli MS 60-1]
gi|388382486|gb|EIL44341.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli KD1]
gi|430996827|gb|ELD13102.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE206]
gi|431254415|gb|ELF47685.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE8]
gi|431595097|gb|ELI65171.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE131]
Length = 182
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
GMW S GH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GMWTNSVCGHPQLGESNEEAVIRRCRYELGVEITPP--ESIYPDFRYRATDPNGIVENEV 117
Query: 126 ADVYLVTTLNPIPL---EAFTLQQTEVSAV 152
V+ T + + + E Q +++AV
Sbjct: 118 CPVFAARTTSALQINDDEVMDYQWCDLAAV 147
>gi|408419045|ref|YP_006760459.1| isopentenyl-diphosphate delta-isomerase Idi [Desulfobacula
toluolica Tol2]
gi|405106258|emb|CCK79755.1| Idi: isopentenyl-diphosphate delta-isomerase [Desulfobacula
toluolica Tol2]
Length = 181
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE++ ++ ++ GI + + + HR + ++F ST+ELLLQ+RA K +WP +
Sbjct: 5 EEYVVIVDEEDKQIGIERKLTVHSKNTPLHRAFSLFLF-NSTKELLLQQRAKDKKTWPLV 63
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W S GH +S + R ELGI L +A E + + + DG + NE
Sbjct: 64 WSNSCCGHPLPDESYTSAVIRRTLYELGIKL--NAVEKISDY-RYCFSRDG-IMENEICP 119
Query: 128 VYLV---TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDV 176
V++ ++ P P EV AVK+I +E++ K + P+ V
Sbjct: 120 VFVAFYDGSVVPNP--------KEVQAVKWIKWEDWLKETGKHPNRYSPWCV 163
>gi|225012659|ref|ZP_03703094.1| isopentenyl-diphosphate delta-isomerase, type 1 [Flavobacteria
bacterium MS024-2A]
gi|225003192|gb|EEG41167.1| isopentenyl-diphosphate delta-isomerase, type 1 [Flavobacteria
bacterium MS024-2A]
Length = 172
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T P+ E H HR + +I + Q L+LQ+RA K PG+W + H G+++L
Sbjct: 18 TMPKMEAHEKAILHRAFSVFILNKEGQ-LMLQQRALHKYHSPGLWTNTCCSHQRMGETNL 76
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFT 143
+ R LQEE+G P E +F+F+ + ++G + D L+ N +P
Sbjct: 77 EAGARRLQEEMGFETP---LEELFSFIYKAPFDNG--LTEHELDHVLLGHHNAVP----E 127
Query: 144 LQQTEVSAVKYI 155
+ EV++ K++
Sbjct: 128 INTEEVASWKWM 139
>gi|224535922|ref|ZP_03676461.1| hypothetical protein BACCELL_00786, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522450|gb|EEF91555.1| hypothetical protein BACCELL_00786 [Bacteroides cellulosilyticus
DSM 14838]
Length = 103
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG T R E H H ++ +F S EL +Q+R ++KD PG
Sbjct: 9 QEMFPLVDEQGNITG-TATRGECHNGSKLLHPVIHLHVF-NSKGELYMQKRPEWKDIQPG 66
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGI 96
WD S GH+ G+S ++ +RE++EELGI
Sbjct: 67 KWDTSVGGHVDLGESVEMALKREVREELGI 96
>gi|86133759|ref|ZP_01052341.1| isopentenyl-diphosphate delta-isomerase [Polaribacter sp. MED152]
gi|85820622|gb|EAQ41769.1| isopentenyl-diphosphate delta-isomerase [Polaribacter sp. MED152]
Length = 172
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T P+ E H HR + ++F E EL+LQ+RA K P +W + H G+S++
Sbjct: 17 TMPKMEAHEKALLHRAFSVFVFNEKG-ELMLQQRAAHKYHSPLLWTNTCCSHQRVGESNV 75
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFT 143
+ +R LQEE+G + VF+F+ + ++G + D L+ P+
Sbjct: 76 EAGRRRLQEEMGFTT---ELKEVFSFIYKAPFDNG--LTEHELDHVLIGKYEDKPV---- 126
Query: 144 LQQTEVSAVKYIAYEEYKNLLAKD 167
+ + EV+A K++ E+ K+ + ++
Sbjct: 127 INEDEVAAYKWMQLEDVKSEIEQN 150
>gi|393199818|ref|YP_006461660.1| NTP pyrophosphohydrolase [Solibacillus silvestris StLB046]
gi|406667733|ref|ZP_11075486.1| isopentenyl-diphosphate delta-isomerase [Bacillus isronensis B3W22]
gi|327439149|dbj|BAK15514.1| NTP pyrophosphohydrolase including oxidative damage repair enzyme
[Solibacillus silvestris StLB046]
gi|405384368|gb|EKB43814.1| isopentenyl-diphosphate delta-isomerase [Bacillus isronensis B3W22]
Length = 208
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIF--AESTQELLLQRRADFKDSWPG 66
E L V ++TGI + R VH G +H + WI +S + LQ R+ K +P
Sbjct: 3 ERLKVFDQFYKETGIEQ-RHLVHAKGYWHEVFHCWIIEKVDSEWRIYLQLRSKNKKDYPN 61
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ-----NVINDGKFI 121
+DI++AGHI A + ++ REL+EE+G+ + +F+ L I++ K
Sbjct: 62 QFDITAAGHILATE-TIEDGIRELKEEVGVKV-------MFSQLTSLGVIPYSIDNEKIK 113
Query: 122 NNEFADVYLVTTLNPIPLEAFTLQQTEVSAV 152
+ EFA+V++ LE F++Q+ E+ +
Sbjct: 114 DYEFANVFVYELTG--GLEKFSIQREELDGI 142
>gi|284048150|ref|YP_003398489.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Acidaminococcus fermentans DSM 20731]
gi|283952371|gb|ADB47174.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Acidaminococcus fermentans DSM 20731]
Length = 462
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
E+ D+ + Q TG R++ H + GDYH TV A I + + L+ QR+ D K+ P
Sbjct: 2 EYWDIYDSSKQVTGRKMVRNDWHMKPGDYHLTVLALIRDAAGRILITQRKGD-KEWAPLK 60
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W+I G + AG++S + RE+ EE G++ + + T+ + NN F D
Sbjct: 61 WEIPGGG-VRAGETSQEAVLREVAEETGLHFTPEQGRCIHTYRSDSPAEQ----NNYFVD 115
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
+Y + +P E +Q+ EV + + E + L +DD
Sbjct: 116 IYEFRGIF-MP-EQVKIQEDEVESFRLATPGEIRQLGKQDD 154
>gi|149278109|ref|ZP_01884248.1| putative isopentenyl-diphosphate delta-isomerase [Pedobacter sp.
BAL39]
gi|149231307|gb|EDM36687.1| putative isopentenyl-diphosphate delta-isomerase [Pedobacter sp.
BAL39]
Length = 173
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
T P+ E H G HR + +IF S ELLLQRRA K G W + H G+ +L
Sbjct: 17 TMPKMEAHLEGRLHRAFSVFIF-NSGGELLLQRRALEKYHSGGKWTNTCCSHPREGEDTL 75
Query: 84 ISAQRELQEELGI 96
++AQR L EE+G+
Sbjct: 76 LAAQRRLMEEMGM 88
>gi|340509217|gb|EGR34773.1| nudix hydrolase, putative [Ichthyophthirius multifiliis]
Length = 180
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96
HRT ++ Q+L + +R+ K PG+WD++ G I ++ +AQREL EE G+
Sbjct: 34 HRTTLIFLENRKNQKLYISKRSQLKKWCPGLWDLAFGGVIQYNETYEQNAQRELLEEAGV 93
Query: 97 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIA 156
N + +FTF Q +V + V+ T + TLQ+ EV K ++
Sbjct: 94 N---EKMVPLFTFYQDDVPLSAPV----WCKVFYAKT-----DQQLTLQKEEVDEAKEMS 141
Query: 157 YEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRYKE 193
++E ++ K+ F P + F I +Q +KE
Sbjct: 142 FQEITEII-KNKSQFAPDGLRA-----FEIFTQNFKE 172
>gi|405117623|gb|AFR92398.1| isopentenyl-diphosphate delta-isomerase [Cryptococcus neoformans
var. grubii H99]
Length = 265
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI--------- 84
G HR + ++F + LLLQ+RAD K ++P MW + H + + L+
Sbjct: 67 GLLHRAFSVFLFRPADGRLLLQKRADEKITFPSMWTNTCCSHPLSIKAELVEEDQAGVKA 126
Query: 85 SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA 141
+A R+L +ELGI L + F F+ T + ++G + +E D L +TLN + LE
Sbjct: 127 AAIRKLPQELGIPESQLKPEDFHFL-TRIHYLAPSNGVWGEHEI-DYILFSTLN-VDLE- 182
Query: 142 FTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L EVS KY++ E +++ SF P+
Sbjct: 183 --LNPNEVSDAKYVSKSELEDMFVDPSNSFTPW 213
>gi|423278902|ref|ZP_17257816.1| hypothetical protein HMPREF1203_02033 [Bacteroides fragilis HMW
610]
gi|424664981|ref|ZP_18102017.1| hypothetical protein HMPREF1205_00856 [Bacteroides fragilis HMW
616]
gi|404575514|gb|EKA80257.1| hypothetical protein HMPREF1205_00856 [Bacteroides fragilis HMW
616]
gi|404585894|gb|EKA90498.1| hypothetical protein HMPREF1203_02033 [Bacteroides fragilis HMW
610]
Length = 176
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 15 TMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSA 73
T+TG T R E H H V+ +F S EL LQ+R ++KD PG WD +
Sbjct: 18 TITGAAT-----RGECHSGSKLLHPVVHLHVF-NSKGELYLQKRPEWKDIQPGKWDTAVG 71
Query: 74 GHISAGDSSLISAQRELQEELGIN 97
GHI G+S I+ +RE+ EELGI
Sbjct: 72 GHIDLGESVEIALKREVAEELGIT 95
>gi|218128583|ref|ZP_03457387.1| hypothetical protein BACEGG_00153 [Bacteroides eggerthii DSM 20697]
gi|317475611|ref|ZP_07934872.1| NUDIX domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
gi|217989307|gb|EEC55621.1| hydrolase, NUDIX family [Bacteroides eggerthii DSM 20697]
gi|316908181|gb|EFV29874.1| NUDIX domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
Length = 167
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96
H V+ +F S EL LQ+R ++KD PG WD S GH+ G+S ++ +RE++EELGI
Sbjct: 36 HPVVHLHVF-NSQGELYLQKRPEWKDIQPGKWDTSVGGHVDLGESVEMALKREVREELGI 94
Query: 97 N--LPKDAFEFVF 107
P+ +VF
Sbjct: 95 TGFTPEAVTRYVF 107
>gi|365924783|ref|ZP_09447546.1| NUDIX family hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 184
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
+E D+ QKTG+ K R + + G++H V +IF ++ +LLQ+R K S PG
Sbjct: 22 DESWDIYNERLQKTGVKKRRDTLAK-GEFHLVVGVFIF-DNNNNVLLQKRTLTKLSNPGK 79
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 115
W S+ G + ++ +A+RE+ EELGI L + F ++N I
Sbjct: 80 WQESAGGSVLKDENVYQAARREVGEELGIELQVNKDSLFFREFRKNWI 127
>gi|258512836|ref|YP_003186270.1| NUDIX hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479562|gb|ACV59881.1| NUDIX hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 211
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFA--ESTQELLLQRRA 58
M + + +EE LD+ T G T PRS VH G +H+T +AWI L++Q R
Sbjct: 1 MGKDMQREEWLDIFTSEMIPCG-TAPRSIVHERGLWHQTFHAWIATGRSPAGRLVVQLRG 59
Query: 59 DFKDSWPGMWDISSAGHISAGDS 81
KD+ P D+S+AGH+ AG+S
Sbjct: 60 ARKDTNPLRLDVSAAGHLEAGES 82
>gi|119471862|ref|XP_001258233.1| isopentenyl-diphosphate delta-isomerase [Neosartorya fischeri NRRL
181]
gi|119406385|gb|EAW16336.1| isopentenyl-diphosphate delta-isomerase [Neosartorya fischeri NRRL
181]
Length = 271
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 36/163 (22%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S LLLQ+RA K ++P MW + H + D++++
Sbjct: 90 GLLHRAFSVFLF-DSNNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGAELDAAVLG 148
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEF-------ADVYLV 131
+AQR+L +ELGI +P + FEF FT + +DGK+ +E ADV L
Sbjct: 149 VKRAAQRKLDQELGIKAEQVPLEKFEF-FTRIHYKAPSDGKWGEHEIDYILFIQADVDL- 206
Query: 132 TTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
+NP EV KY++ EE K + + F P+
Sbjct: 207 -NVNP----------NEVRDTKYVSAEELKQMFIQPGLKFTPW 238
>gi|297818824|ref|XP_002877295.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323133|gb|EFH53554.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 182
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 71 SSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN-----VINDGKFIN 122
AGHIS GD SL+SA+RELQEELG+ LP DA + ++F +N + DGK +N
Sbjct: 47 GGAGHISDGDPSLLSAKRELQEELGVKLPNDALK-RYSFFCRNDQSNPICKDGKQVN 102
>gi|146417370|ref|XP_001484654.1| hypothetical protein PGUG_02383 [Meyerozyma guilliermondii ATCC
6260]
gi|146390127|gb|EDK38285.1| hypothetical protein PGUG_02383 [Meyerozyma guilliermondii ATCC
6260]
Length = 281
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGH---------ISAGD---- 80
G HR + ++F E + LLLQ+RAD K ++P MW + H ISAG
Sbjct: 89 GLLHRAFSVFLFNEEGK-LLLQQRADEKITFPAMWTNTCCSHPLCVAGELGISAGGDCKT 147
Query: 81 ------SSLISAQRELQEELGI---NLPKDAFEFVFTFLQQNVIND--GKFINNEFADVY 129
+ I+AQR+L+ ELGI + P + F+F+ ++ D K+ +E +
Sbjct: 148 LDNAVAGAKIAAQRKLEHELGIPAEDAPIEDFQFLTRIHYKSASGDEKSKWGEHEIDYIL 207
Query: 130 LVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
++ T NP +EA EV KY++ EE + + F P+
Sbjct: 208 ILKTKNP-KIEA---NYNEVKDYKYVSAEELHEMFNDESLVFTPW 248
>gi|424731852|ref|ZP_18160433.1| isopentenyl-diphosphate delta-isomerase [Citrobacter sp. L17]
gi|422893480|gb|EKU33327.1| isopentenyl-diphosphate delta-isomerase [Citrobacter sp. L17]
Length = 184
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++EH+ +L Q G + + H + WIF E Q LL+ RR+ K +WP
Sbjct: 1 MRQEHVILLNEQDQPCGTLEKYAAHTATTPLHSAFSCWIFNEQGQ-LLVTRRSLHKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+++ ++ R + ELG ++ + V+ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGETNEVAIVRRARFELGADI--NLLTPVYADFRYRATDPSGIVENEV 117
Query: 126 ADVY---LVTTLNPIPLEAFTLQ 145
VY +V+ L P E Q
Sbjct: 118 CPVYAAHIVSELQLNPDEVMDCQ 140
>gi|431930305|ref|YP_007243351.1| isopentenyl-diphosphate delta-isomerase [Thioflavicoccus mobilis
8321]
gi|431828608|gb|AGA89721.1| isopentenyl-diphosphate delta-isomerase, type 1 [Thioflavicoccus
mobilis 8321]
Length = 189
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEE 93
G HR + +IF++ + +LLQ+R+ K WP W S H G+ L +A R L+EE
Sbjct: 37 GVLHRAFSIFIFSDGGK-VLLQQRSREKPLWPLYWSNSCCSHPRKGEDGLAAAHRRLREE 95
Query: 94 LGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVK 153
LG++ F++ F Q D +E VY+ + + ++ TEV+A +
Sbjct: 96 LGLDT---ELTFMYRFQYQAQFGDLG-AEHELCSVYVGRLSDEVAIDG---NPTEVAAWR 148
Query: 154 YIAYEEYKNLLAKDDPSFVPYDV 176
++ L+A D P+ V
Sbjct: 149 WLDCTAVDRLVAADAEPLTPWFV 171
>gi|153807379|ref|ZP_01960047.1| hypothetical protein BACCAC_01657 [Bacteroides caccae ATCC 43185]
gi|423216856|ref|ZP_17203352.1| hypothetical protein HMPREF1061_00125 [Bacteroides caccae
CL03T12C61]
gi|149129741|gb|EDM20953.1| hydrolase, NUDIX family [Bacteroides caccae ATCC 43185]
gi|392629386|gb|EIY23393.1| hypothetical protein HMPREF1061_00125 [Bacteroides caccae
CL03T12C61]
Length = 172
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E V+ G TG R E H H V+ IF + EL LQ+R ++KD PG
Sbjct: 7 QEMFPVVDEQGNITGAAT-RGECHSGSRLLHPVVHLHIF-NTKGELYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGI 96
WD + GHI G+S I+ +RE++EELGI
Sbjct: 65 KWDTAVGGHIDLGESVEIALKREVREELGI 94
>gi|398998784|ref|ZP_10701541.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudomonas sp.
GM18]
gi|398133011|gb|EJM22255.1| isopentenyl-diphosphate delta-isomerase, type 1 [Pseudomonas sp.
GM18]
Length = 179
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE L ++ +K G P+ + H+ G HR + +IF + + LLLQ+RA K G+
Sbjct: 2 EELLILVDQHDRKKGCA-PKLQAHQKGLLHRAFSIFIFDHAGR-LLLQQRAFGKYHSQGL 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + GH G+ ++ +A+R LQEE+G+ + V T L + +++ + I +EF
Sbjct: 60 WTNTCCGHPRPGERTMAAAKRRLQEEMGMTC---SLRKVSTLLYREHVSN-QLIEHEFDH 115
Query: 128 VYL-VTTLNPI--PLEAFTLQQTEVSAV 152
+++ ++ +P+ P EA Q +S +
Sbjct: 116 IFVGISHGDPVANPEEAHAWQWLPLSQI 143
>gi|154484172|ref|ZP_02026620.1| hypothetical protein EUBVEN_01883 [Eubacterium ventriosum ATCC
27560]
gi|149735214|gb|EDM51100.1| hydrolase, NUDIX family [Eubacterium ventriosum ATCC 27560]
Length = 237
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
+ E V E D+ + G R E + YH V+ WI S E L+ +R+
Sbjct: 61 IVEYVPDAEIWDLYNENRELLGKDHVRGEQLPIDGYHLVVHVWI-RNSKGEYLISQRSAN 119
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
+ ++P MW+ G + G+ SL+ A RE +EE+G++L + + +FT ++ I +GK
Sbjct: 120 RPTYPLMWE-CVGGSVVKGEDSLLGAIREAKEEVGVDLMPENGQVLFTKTRK--IIEGK- 175
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
I N+ DV+L + L T EV+ V ++ ++ K L D
Sbjct: 176 IFNDIMDVWLFEYDGEVDLGNATTD--EVAQVAWMDRKQIKELFDAD 220
>gi|300780704|ref|ZP_07090558.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium genitalium
ATCC 33030]
gi|300532411|gb|EFK53472.1| isopentenyl-diphosphate delta-isomerase [Corynebacterium genitalium
ATCC 33030]
Length = 181
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 18 GQKTGITKPRSEVHRVGD-YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI 76
G+ TG T + EVH H +AW+F +++ LL+ RRA K +WPG+W S GH
Sbjct: 11 GRPTG-TADKFEVHTTDTPLHLAFSAWLF-DASGHLLISRRALGKKTWPGVWTNSFCGHP 68
Query: 77 SAGDSSLISAQRELQEELGINLPKDA---FEFVFTFLQQNVINDGKFINNEFADVYLV 131
+ G+++ + R Q+ELG LP A V + ++ + +E VY+V
Sbjct: 69 APGEATEDAVVRRAQQELG--LPASALADLRCVLPDFRYRAVDSSGIVEHEICPVYVV 124
>gi|395205864|ref|ZP_10396495.1| putative isopentenyl-diphosphate delta-isomerase [Propionibacterium
humerusii P08]
gi|422440751|ref|ZP_16517564.1| isopentenyl-diphosphate delta-isomerase [Propionibacterium acnes
HL037PA3]
gi|422472129|ref|ZP_16548617.1| isopentenyl-diphosphate delta-isomerase [Propionibacterium acnes
HL037PA2]
gi|422572892|ref|ZP_16648459.1| isopentenyl-diphosphate delta-isomerase [Propionibacterium acnes
HL044PA1]
gi|313836286|gb|EFS74000.1| isopentenyl-diphosphate delta-isomerase [Propionibacterium acnes
HL037PA2]
gi|314928751|gb|EFS92582.1| isopentenyl-diphosphate delta-isomerase [Propionibacterium acnes
HL044PA1]
gi|314971212|gb|EFT15310.1| isopentenyl-diphosphate delta-isomerase [Propionibacterium acnes
HL037PA3]
gi|328906500|gb|EGG26275.1| putative isopentenyl-diphosphate delta-isomerase [Propionibacterium
humerusii P08]
Length = 197
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 52 LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111
+LL RRA K +WPG+W + GH G++++ +A R +ELG++L V
Sbjct: 61 VLLTRRALTKVAWPGVWTNTCCGHPRVGETTIDAAVRRTHQELGLDLDPRRMRVVLPDFS 120
Query: 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163
+ G + +EF V + P L EV V ++ +++ +L
Sbjct: 121 YRATDAGGIVEDEFCPVVVARLFLPEELVELNPDPDEVEEVTWVGWQDMYDL 172
>gi|395228527|ref|ZP_10406850.1| isopentenyl-diphosphate delta-isomerase [Citrobacter sp. A1]
gi|394718176|gb|EJF23820.1| isopentenyl-diphosphate delta-isomerase [Citrobacter sp. A1]
Length = 188
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+++EH+ +L Q G + + H + WIF E Q LL+ RR+ K +WP
Sbjct: 5 MRQEHVILLNEQDQPCGTLEKYAAHTATTPLHSAFSCWIFNEQGQ-LLVTRRSLHKKAWP 63
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+++ ++ R + ELG ++ + V+ + + + NE
Sbjct: 64 GVWTNSVCGHPQLGETNEVAIVRRARFELGADI--NLLTPVYADFRYRATDPSGIVENEV 121
Query: 126 ADVY---LVTTLNPIPLEAFTLQ 145
VY +V+ L P E Q
Sbjct: 122 CPVYAAHIVSELQLNPDEVMDCQ 144
>gi|259909014|ref|YP_002649370.1| isopentenyl-diphosphate delta-isomerase [Erwinia pyrifoliae Ep1/96]
gi|224964636|emb|CAX56150.1| Isopentenyl-diphosphate delta-isomerase [Erwinia pyrifoliae Ep1/96]
Length = 180
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S +LLLQ+RA K G+W ++ GH + + +AQR
Sbjct: 23 EVHEKGLLHRAVTVYVF-NSDHQLLLQQRARGKYHCGGLWSNTTCGHPYPQELTAEAAQR 81
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNP 136
L EE+G++L + FE + N + + ++ + FA + +NP
Sbjct: 82 RLIEEMGLDLNLQPVFELSYNLPLSNGLTEHEYGHVYFAISDALPAMNP 130
>gi|121699896|ref|XP_001268213.1| isopentenyl-diphosphate delta-isomerase [Aspergillus clavatus NRRL
1]
gi|119396355|gb|EAW06787.1| isopentenyl-diphosphate delta-isomerase [Aspergillus clavatus NRRL
1]
Length = 271
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S LLLQ+RA K ++P MW + H + D++++
Sbjct: 90 GLLHRAFSVFLF-DSKNRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGAELDAAILG 148
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L +ELGI +P D FEF FT + +DGK+ +E Y++ +
Sbjct: 149 VKRAAQRKLDQELGIKAEQVPLDKFEF-FTRIHYKAPSDGKWGEHEID--YILFIQADVD 205
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + E+ +Y+ EE K + + F P+
Sbjct: 206 LD---VNPNEIRDTQYVTAEELKQMFTQPGLKFTPW 238
>gi|344342998|ref|ZP_08773868.1| Isopentenyl-diphosphate Delta-isomerase [Marichromatium purpuratum
984]
gi|343805550|gb|EGV23446.1| Isopentenyl-diphosphate Delta-isomerase [Marichromatium purpuratum
984]
Length = 192
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR + +F + ELLLQRRAD K + W + GH G++++ A R
Sbjct: 43 EVHVDGRLHRAFSILVF-NARGELLLQRRADAKYHFANRWSNTCCGHPRPGETTVAGAGR 101
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVY---LVTTLNPIPLEAFTL 144
L+EE G +P + E ++ Q I +E+ +Y T P P E
Sbjct: 102 RLKEEFGFRVPLTERNELIYRAEDQA----SGLIEHEYLHIYHGHFTETPQPDPAEVGAW 157
Query: 145 QQTEVSAVK 153
+ V+A++
Sbjct: 158 RWMSVAAIR 166
>gi|291539164|emb|CBL12275.1| Predicted transcriptional regulator [Roseburia intestinalis XB6B4]
Length = 236
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
+ E V E D+ + G R E + YH V+ WI + L+ QR A+
Sbjct: 61 IVEYVPDAEIWDLYNENRELLGKDHVRGEQLPIDGYHLVVHVWIRNSKGEYLISQRSAN- 119
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
+ ++P MW+ G + G+ SL A RE +EE+G++L + + +FT ++ I +GK
Sbjct: 120 RPTYPLMWE-CVGGSVVKGEDSLQGAIREAKEEVGVDLMPENGQVLFTKTRK--IIEGK- 175
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
I N+ DV+L + L T+ EV+ V ++ E+ K L
Sbjct: 176 IFNDIMDVWLFEYEGEVDLGNATMD--EVAQVAWMNREQIKELF 217
>gi|406998636|gb|EKE16552.1| Isopentenyl-diphosphate delta-isomerase, type 1 [uncultured
bacterium]
Length = 175
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EE ++++ G + G + + H G H + ++F ++ ELLLQ+RAD K G+
Sbjct: 2 EEDINLVDNNGNRVGFI-GKMDAHFQGKLHEAFSIFVFNKNN-ELLLQKRADEKYHSGGL 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFA 126
W + GH A ++ + R L EE+G + K+ F F++ N + + +F ++ F
Sbjct: 60 WSNTCCGHPRANENLNSAVHRRLNEEMGFDCELKEVFSFIYNAKLPNALIEYEF-DHVFI 118
Query: 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
+ T + P P EA S K+I E+ K
Sbjct: 119 GHFEKTGITPNPEEA--------SDYKWIKLEDLK 145
>gi|422969966|ref|ZP_16973759.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli TA124]
gi|371600823|gb|EHN89593.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli TA124]
Length = 182
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSW 64
+Q EH+ +L G TG T+ + H H ++W+F Q LL+ RRA K +W
Sbjct: 1 MQTEHVILLNAQGVPTG-TQEKYAAHTADTLLHLAFSSWLFNAKGQ-LLVTRRALSKKAW 58
Query: 65 PGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNE 124
PG+W S GH G+S+ + R + ELG+ + A E V+ + + + NE
Sbjct: 59 PGVWTNSVCGHPQLGESNEDAVIRRCRFELGVEI--TAPEAVYPDFRYRATDPNGIVENE 116
Query: 125 FADVYLVTTLNPI 137
V+ T + +
Sbjct: 117 VCPVFAARTTSAL 129
>gi|433462404|ref|ZP_20419990.1| hypothetical protein D479_12473 [Halobacillus sp. BAB-2008]
gi|432188909|gb|ELK46056.1| hypothetical protein D479_12473 [Halobacillus sp. BAB-2008]
Length = 166
Score = 56.6 bits (135), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 13/159 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ +KTG T R G+YH V+ WI S E+ + +RA K + G W
Sbjct: 8 ELWDIHDQKRRKTGQTVERGRPMAAGEYHIVVHVWI-KNSRGEVFVTKRAPEK-HFGGYW 65
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G ++AG+ S A RE++EE+GI+L +DA L+++V +F +F DV
Sbjct: 66 E-GTGGSVTAGEDSYTGALREVKEEIGIDL-QDA----SGSLEKSVCR-AEF--QDFMDV 116
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167
++ + EA LQQ EV +++ +E + ++ ++
Sbjct: 117 WVFQ--HDFKEEAVVLQQGEVREGRWVTRQELEAMVGEN 153
>gi|387871938|ref|YP_005803314.1| isopentenyl-diphosphate delta-isomerase [Erwinia pyrifoliae DSM
12163]
gi|283479027|emb|CAY74943.1| isopentenyl-diphosphate delta-isomerase [Erwinia pyrifoliae DSM
12163]
Length = 162
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
EVH G HR V ++F S +LLLQ+RA K G+W ++ GH + + +AQR
Sbjct: 5 EVHEKGLLHRAVTVYVF-NSDHQLLLQQRARGKYHCGGLWSNTTCGHPYPQELTAEAAQR 63
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNP 136
L EE+G++L + FE + N + + ++ + FA + +NP
Sbjct: 64 RLIEEMGLDLNLQPVFELSYNLPLSNGLTEHEYGHVYFAISDALPAMNP 112
>gi|189463862|ref|ZP_03012647.1| hypothetical protein BACINT_00195 [Bacteroides intestinalis DSM
17393]
gi|189438812|gb|EDV07797.1| hydrolase, NUDIX family [Bacteroides intestinalis DSM 17393]
Length = 168
Score = 56.6 bits (135), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG R E H H ++ +F S EL +Q+R ++KD PG
Sbjct: 7 QEMFPIVDEQGNITG-AATRGECHNGSKLLHPVIHLHVF-NSKGELYMQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
WD S GH+ G+S ++ +RE++EELGI P+ +VF
Sbjct: 65 KWDTSVGGHVDLGESVEMALKREVREELGITDFTPETITSYVF 107
>gi|384253456|gb|EIE26931.1| hypothetical protein COCSUDRAFT_11872, partial [Coccomyxa
subellipsoidea C-169]
Length = 182
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 7 QEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+EE D++ G + RS VH G HR V ++F S ELLLQ+R+ K P
Sbjct: 14 EEELFDIVDDQNNVIGQER-RSVVHAQGLKHRAVYCFVF-NSRGELLLQQRSPRKKIGPL 71
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINL 98
WD+S A H+ G+ +A R LQEELGI+L
Sbjct: 72 QWDLSIAEHLEPGEEYRQAAARGLQEELGISL 103
>gi|215488189|ref|YP_002330620.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O127:H6
str. E2348/69]
gi|312964852|ref|ZP_07779092.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 2362-75]
gi|415839619|ref|ZP_11521361.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli RN587/1]
gi|417280798|ref|ZP_12068098.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 3003]
gi|417757134|ref|ZP_12405205.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2B]
gi|418998084|ref|ZP_13545674.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1A]
gi|419003474|ref|ZP_13550992.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1B]
gi|419009012|ref|ZP_13556436.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1C]
gi|419014802|ref|ZP_13562145.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1D]
gi|419019826|ref|ZP_13567130.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1E]
gi|419025218|ref|ZP_13572441.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2A]
gi|419030373|ref|ZP_13577529.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2C]
gi|419036061|ref|ZP_13583144.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2D]
gi|419041059|ref|ZP_13588081.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2E]
gi|425279244|ref|ZP_18670477.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli
ARS4.2123]
gi|254803430|sp|B7UHT8.1|IDI_ECO27 RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|215266261|emb|CAS10690.1| isopentenyl diphosphate isomerase [Escherichia coli O127:H6 str.
E2348/69]
gi|312290408|gb|EFR18288.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 2362-75]
gi|323188713|gb|EFZ73998.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli RN587/1]
gi|377842034|gb|EHU07089.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1A]
gi|377842367|gb|EHU07421.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1C]
gi|377845197|gb|EHU10220.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1B]
gi|377855484|gb|EHU20355.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1D]
gi|377858986|gb|EHU23824.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC1E]
gi|377862576|gb|EHU27388.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2A]
gi|377872512|gb|EHU37158.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2B]
gi|377875750|gb|EHU40359.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2C]
gi|377878579|gb|EHU43166.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2D]
gi|377888161|gb|EHU52633.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli DEC2E]
gi|386245127|gb|EII86857.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 3003]
gi|408200134|gb|EKI25322.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli
ARS4.2123]
Length = 182
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGESNAEAVIRRCRYELGVEITPP--ESIYPGFRYRATDPNGIVENEV 117
Query: 126 ADVYLVTTLNPIPL---EAFTLQQTEVSAV 152
V+ T + + + E Q +++AV
Sbjct: 118 CPVFAALTTSALQINDDEVMDYQWCDLAAV 147
>gi|333902182|ref|YP_004476055.1| NUDIX hydrolase [Pseudomonas fulva 12-X]
gi|333117447|gb|AEF23961.1| NUDIX hydrolase [Pseudomonas fulva 12-X]
Length = 177
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F S EL + RR K +PG WDI++ G ++AG+S S
Sbjct: 33 PRAELRSRGLIGRGTFILLF-NSAGELCVHRRTLSKAVYPGYWDIAAGGMVAAGESYARS 91
Query: 86 AQRELQEELGI 96
A+REL EELGI
Sbjct: 92 AERELAEELGI 102
>gi|433604988|ref|YP_007037357.1| NUDIX family hydrolase [Saccharothrix espanaensis DSM 44229]
gi|407882841|emb|CCH30484.1| NUDIX family hydrolase [Saccharothrix espanaensis DSM 44229]
Length = 164
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
EH+ V+ G G + R+ + G +H + + + L + RR D KD +PG++
Sbjct: 2 EHVLVVDPDGTPVG-SATRARMRAEGLWHACAVIVVRSRDGERLFVHRRTDTKDVYPGLY 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
D + G ++A ++ A REL EELG+ P FL + DG A V
Sbjct: 61 DPTCGGVVAADETPDECAVRELAEELGVTEPP-------KFLFKTPFVDGTI--RYIAHV 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161
Y V P FTLQ EV++ +++ E +
Sbjct: 112 YEVRCDGP-----FTLQPEEVASGEWVDVAEVR 139
>gi|350566002|ref|ZP_08934715.1| nucleoside diphosphate hydrolase [Peptoniphilus indolicus ATCC
29427]
gi|348663209|gb|EGY79809.1| nucleoside diphosphate hydrolase [Peptoniphilus indolicus ATCC
29427]
Length = 172
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E DV + +G++ R + G+YH WI + L+Q+R+ K + MW
Sbjct: 3 EFWDVYSKSGKRKNRVIKRGDKMLNGEYHLVSEGWIRVDE-DHYLIQKRSKNKKLFGDMW 61
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
S G + AG+ RE +EE+GI++ DA I + I F
Sbjct: 62 YCSVGGSVLAGEEPKEGLIREAREEIGIDI-SDA-----------RIRLKRIIVESFGIF 109
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168
Y+ I LE LQ+ EVS VK + EE L+ D
Sbjct: 110 YIYLIDKKIKLEDLVLQEDEVSEVKIVTLEEIFELIENGD 149
>gi|34810373|pdb|1Q54|A Chain A, Structure And Mechanism Of Action Of
Isopentenylpyrophosphate-Dimethylallylpyrophosphate
Isomerase: Complex With The Bromohydrine Of Ipp
gi|34810374|pdb|1Q54|B Chain B, Structure And Mechanism Of Action Of
Isopentenylpyrophosphate-Dimethylallylpyrophosphate
Isomerase: Complex With The Bromohydrine Of Ipp
gi|42543243|pdb|1OW2|A Chain A, Structure And Mechanism Of Action Of
Isopentenylpyrophosphate-Dimethylallylpyrophosphate
Isomerase: Complex Of C67a Mutant With Eipp
gi|42543244|pdb|1OW2|B Chain B, Structure And Mechanism Of Action Of
Isopentenylpyrophosphate-Dimethylallylpyrophosphate
Isomerase: Complex Of C67a Mutant With Eipp
Length = 183
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S AGH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVAGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENEV 117
Query: 126 ADVYLVTT 133
V+ T
Sbjct: 118 CPVFAART 125
>gi|423226235|ref|ZP_17212701.1| hypothetical protein HMPREF1062_04887 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629983|gb|EIY23986.1| hypothetical protein HMPREF1062_04887 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 168
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 27 RSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
R E H H ++ +F S EL +Q+R ++KD PG WD S GH+ G+S ++
Sbjct: 25 RGECHNGSKLLHPVIHLHVF-NSKGELYMQKRPEWKDIQPGKWDTSVGGHVDLGESVEMA 83
Query: 86 AQRELQEELGIN--LPKDAFEFVF 107
+RE++EELGI P+ +VF
Sbjct: 84 LKREVREELGITDFTPETVTHYVF 107
>gi|380487970|emb|CCF37693.1| isopentenyl-diphosphate delta-isomerase [Colletotrichum
higginsianum]
Length = 257
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGH---ISAGDSSLI------ 84
G HR + ++F + LLLQ+RA K ++P MW + H I S +
Sbjct: 76 GLLHRAFSVFLFDPADNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGSNLEDSVAG 135
Query: 85 ---SAQRELQEELGIN---LPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L+ ELGIN +P + F F+ T + +DGK+ +E Y++ +
Sbjct: 136 VKRAAQRKLEHELGINPAQVPFEDFHFL-TRIHYKAPSDGKWGEHEID--YILFIKAKVD 192
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + + EV A +Y++ +E K L F P+
Sbjct: 193 LD---INKNEVQATQYVSADELKKLFQDPSLKFTPW 225
>gi|270261615|ref|ZP_06189888.1| isopentenyl-diphosphate delta-isomerase, type 1 [Serratia odorifera
4Rx13]
gi|421783280|ref|ZP_16219730.1| isopentenyl-diphosphate delta-isomerase [Serratia plymuthica A30]
gi|270045099|gb|EFA18190.1| isopentenyl-diphosphate delta-isomerase, type 1 [Serratia odorifera
4Rx13]
gi|407754523|gb|EKF64656.1| isopentenyl-diphosphate delta-isomerase [Serratia plymuthica A30]
Length = 179
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
++ ++ +H+ G HR + +IF +S LLLQ+RA K G+W S GH G+++
Sbjct: 17 SQTKTRIHQQGLLHRAFSIFIF-DSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGEATA 75
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
+AQR LQEE+G + + V +F+ ++ + G I +EF +Y+
Sbjct: 76 AAAQRRLQEEMGFS---SELQQVSSFIYRSEV-PGDLIEHEFDHIYV 118
>gi|15826360|pdb|1HX3|A Chain A, Crystal Structure Of E.Coli Isopentenyl
Diphosphate:dimethylallyl Diphosphate Isomerase
gi|15826361|pdb|1HX3|B Chain B, Crystal Structure Of E.Coli Isopentenyl
Diphosphate:dimethylallyl Diphosphate Isomerase
Length = 190
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S AGH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVAGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENEV 117
Query: 126 ADVYLVTT 133
V+ T
Sbjct: 118 CPVFAART 125
>gi|425306651|ref|ZP_18696338.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli N1]
gi|408226991|gb|EKI50611.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli N1]
Length = 182
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+SS + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGESSEDAVIRRCRYELGVEITPP--ESIYPDFRYRAADPSGIVENEV 117
Query: 126 ADVYLVTTLNPI 137
V+ T + +
Sbjct: 118 CPVFAARTTSAL 129
>gi|386815913|ref|ZP_10103131.1| isopentenyl-diphosphate delta-isomerase [Thiothrix nivea DSM 5205]
gi|386420489|gb|EIJ34324.1| isopentenyl-diphosphate delta-isomerase [Thiothrix nivea DSM 5205]
Length = 183
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 13 VLTMTGQKTGITKPRSEVHRV-GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDIS 71
VL G T P+ VH + HR +A+IF +LLLQ+R+ K +WPG W S
Sbjct: 5 VLVDAGNAVLGTMPKYLVHTLHTPLHRGFSAFIF-NPQGKLLLQQRSFSKLTWPGFWSNS 63
Query: 72 SAGHISAGDSSLISAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
GH + G+S + QR ELGI +L + +F + Q V + NE V
Sbjct: 64 CCGHPALGESVTEAIQRRAWVELGIHVHDLQEALPDFHYCCEHQGV------VENEICPV 117
Query: 129 YLVTTLN---PIPLEAFT 143
+L T + P PLE T
Sbjct: 118 WLARTADEPYPDPLEVAT 135
>gi|388471549|ref|ZP_10145758.1| hydrolase, NUDIX family [Pseudomonas synxantha BG33R]
gi|388008246|gb|EIK69512.1| hydrolase, NUDIX family [Pseudomonas synxantha BG33R]
Length = 178
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
RS++ + G R ++F S EL + RR K +PG WD ++ G ++AG+S +SA
Sbjct: 34 RSDLRQRGLIGRCTFIFLF-NSKGELCVHRRTLSKALYPGFWDTAAGGMVAAGESYALSA 92
Query: 87 QRELQEELGIN 97
QREL EELG++
Sbjct: 93 QRELAEELGVS 103
>gi|449295841|gb|EMC91862.1| hypothetical protein BAUCODRAFT_126839 [Baudoinia compniacensis
UAMH 10762]
Length = 263
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S LLLQ+RA K ++P MW + H S D+++
Sbjct: 82 GLLHRAFSCFLF-DSQNRLLLQQRASEKITFPDMWTNTCCSHPLGVPGETGSTLDAAVAG 140
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP 138
+AQR+L +ELGI +P + F+F+ T + +DGK+ +E Y++ +
Sbjct: 141 VKRAAQRKLDQELGIKAKQVPVEHFDFL-TRIHYKAPSDGKWGEHEID--YILFIKADVD 197
Query: 139 LEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
L+ + EV A +Y++ E K + D +F P+
Sbjct: 198 LD---INPNEVQATRYVSEAELKEMFKDDKLTFTPW 230
>gi|422780173|ref|ZP_16832958.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli TW10509]
gi|432888140|ref|ZP_20101892.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE158]
gi|323978820|gb|EGB73901.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli TW10509]
gi|431414595|gb|ELG97146.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli KTE158]
Length = 182
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H + W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSCWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+S+ + R + ELG+ + A E V+ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGESNEDAVIRRCRFELGVEI--TAPEPVYPDFRYRATDPNGIVENEV 117
Query: 126 ADVYLVTTLNPIPL---EAFTLQQTEVSAV 152
V+ T + + + E Q +++AV
Sbjct: 118 CPVFAARTTSALQINDDEVMDYQWCDLAAV 147
>gi|170723761|ref|YP_001751449.1| NUDIX hydrolase [Pseudomonas putida W619]
gi|169761764|gb|ACA75080.1| NUDIX hydrolase [Pseudomonas putida W619]
Length = 178
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 26 PRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
PR+E+ G R +F EL + RR K +PG WD+++ G ++AG++ S
Sbjct: 33 PRAELRGRGLIGRCTFILLF-NGAGELCVHRRTLSKALYPGYWDVAAGGMVAAGEAYADS 91
Query: 86 AQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
A REL EELGI + F F F Q + N + VY + P+ LQ
Sbjct: 92 AARELAEELGIEGAELRFHERFYFDQPD--------NRLWCAVYSAVSDAPL-----RLQ 138
Query: 146 QTEVSAVKYIA 156
EVS ++I+
Sbjct: 139 PEEVSEARFIS 149
>gi|429750382|ref|ZP_19283433.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga sp. oral
taxon 332 str. F0381]
gi|429165311|gb|EKY07371.1| isopentenyl-diphosphate delta-isomerase [Capnocytophaga sp. oral
taxon 332 str. F0381]
Length = 175
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGM 67
EEH+ ++ G+ P+ E H+ HR + ++ + E++LQ+RA K P +
Sbjct: 2 EEHVILVDEQDNAIGLM-PKLEAHQKAVLHRAFSVFVLNDKG-EVMLQQRAAHKYHSPTL 59
Query: 68 WDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFAD 127
W + H AG++++ + +R LQEE+G V TF+ + ++G + D
Sbjct: 60 WTNTCCSHQRAGETTVAAGKRRLQEEMGFT---TELTDVLTFIYKAPFDNG--LTEHELD 114
Query: 128 VYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNII 187
L+ N +P + + EV+A ++ E K + K +P+F Y + F II
Sbjct: 115 HILIGYYNDVP----AINEEEVAAWRWETPENIKKDIEK-NPTF--------YTEWFKII 161
Query: 188 SQRY 191
++
Sbjct: 162 FAQF 165
>gi|413955139|gb|AFW87788.1| hypothetical protein ZEAMMB73_350821 [Zea mays]
Length = 490
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 519 APIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKNI 571
AP+R+ ++ GP+TVAF+ P+DE I +RGTSMVMLKN+ EAKF +
Sbjct: 341 APMRLYRIA--GAGCGGPKTVAFSFPSDEWIQNERGTSMVMLKNILEAKFSQL 391
>gi|291238598|ref|XP_002739201.1| PREDICTED: isopentenyl-diphosphate delta isomerase-like
[Saccoglossus kowalevskii]
Length = 257
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 22/153 (14%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL---------ISAQ 87
HR + ++F Q LLLQ+R+D K ++PG W S H + S L +AQ
Sbjct: 81 HRAFSVFLFNPEGQ-LLLQQRSDVKITFPGFWTNSCCSHPLSVPSELDETDNIGVKRAAQ 139
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L +ELGI +P D +++ L + +DGK+ +E Y++ + LE L
Sbjct: 140 RKLYQELGIKSEQVPLDELDYLTRILYK-APSDGKWGEHEID--YILFIKKKVDLE---L 193
Query: 145 QQTEVSAVKYIAYEEYKNLLA---KDDPSFVPY 174
EV A +YI +E KN ++ K+ P+
Sbjct: 194 NANEVQAHRYITMQELKNFMSEAEKNGTKITPW 226
>gi|218696484|ref|YP_002404151.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli 55989]
gi|407470763|ref|YP_006782794.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407480575|ref|YP_006777724.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 2011C-3493]
gi|410481141|ref|YP_006768687.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 2009EL-2050]
gi|417806420|ref|ZP_12453363.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. LB226692]
gi|417834174|ref|ZP_12480620.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 01-09591]
gi|417867356|ref|ZP_12512393.1| hypothetical protein C22711_4283 [Escherichia coli O104:H4 str.
C227-11]
gi|422989001|ref|ZP_16979774.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. C227-11]
gi|422995893|ref|ZP_16986657.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. C236-11]
gi|423001038|ref|ZP_16991792.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 09-7901]
gi|423004706|ref|ZP_16995452.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 04-8351]
gi|423011210|ref|ZP_17001944.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-3677]
gi|423020438|ref|ZP_17011147.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4404]
gi|423025604|ref|ZP_17016301.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4522]
gi|423031425|ref|ZP_17022112.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4623]
gi|423039250|ref|ZP_17029924.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423044370|ref|ZP_17035037.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423046099|ref|ZP_17036759.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423054637|ref|ZP_17043444.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423061612|ref|ZP_17050408.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|429720469|ref|ZP_19255394.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429772367|ref|ZP_19304387.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02030]
gi|429777314|ref|ZP_19309288.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429786039|ref|ZP_19317934.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02092]
gi|429791929|ref|ZP_19323783.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02093]
gi|429792778|ref|ZP_19324626.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02281]
gi|429799353|ref|ZP_19331151.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02318]
gi|429802970|ref|ZP_19334730.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02913]
gi|429812766|ref|ZP_19344449.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-03439]
gi|429813314|ref|ZP_19344993.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-04080]
gi|429818522|ref|ZP_19350156.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-03943]
gi|429904873|ref|ZP_19370852.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429909009|ref|ZP_19374973.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-9941]
gi|429914883|ref|ZP_19380830.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429919913|ref|ZP_19385844.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429925733|ref|ZP_19391646.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429929669|ref|ZP_19395571.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429936208|ref|ZP_19402094.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429941888|ref|ZP_19407762.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429944569|ref|ZP_19410431.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429952127|ref|ZP_19417973.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429955476|ref|ZP_19421308.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec12-0466]
gi|218353216|emb|CAU99131.1| isopentenyl diphosphate isomerase [Escherichia coli 55989]
gi|340733170|gb|EGR62302.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 01-09591]
gi|340739019|gb|EGR73257.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. LB226692]
gi|341920645|gb|EGT70251.1| hypothetical protein C22711_4283 [Escherichia coli O104:H4 str.
C227-11]
gi|354862728|gb|EHF23166.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. C236-11]
gi|354868012|gb|EHF28434.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. C227-11]
gi|354868406|gb|EHF28824.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 04-8351]
gi|354874009|gb|EHF34386.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 09-7901]
gi|354880693|gb|EHF41029.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-3677]
gi|354887847|gb|EHF48112.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4404]
gi|354892435|gb|EHF52644.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4522]
gi|354893641|gb|EHF53844.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354896444|gb|EHF56615.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4623]
gi|354897821|gb|EHF57978.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354911673|gb|EHF71677.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354913622|gb|EHF73612.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916579|gb|EHF76551.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|406776303|gb|AFS55727.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407052872|gb|AFS72923.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 2011C-3493]
gi|407066798|gb|AFS87845.1| isopentenyl-diphosphate delta-isomerase [Escherichia coli O104:H4
str. 2009EL-2071]
gi|429347569|gb|EKY84342.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02092]
gi|429358605|gb|EKY95274.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02030]
gi|429360350|gb|EKY97009.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429360661|gb|EKY97319.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02093]
gi|429364029|gb|EKZ00654.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02318]
gi|429375584|gb|EKZ12118.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02281]
gi|429377992|gb|EKZ14507.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-03439]
gi|429389637|gb|EKZ26057.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-02913]
gi|429393471|gb|EKZ29866.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-03943]
gi|429403475|gb|EKZ39759.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. 11-04080]
gi|429404660|gb|EKZ40931.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429408175|gb|EKZ44415.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429413279|gb|EKZ49468.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429416008|gb|EKZ52166.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429419689|gb|EKZ55824.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429430528|gb|EKZ66589.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429434894|gb|EKZ70915.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429437027|gb|EKZ73039.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429441976|gb|EKZ77939.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429446697|gb|EKZ82625.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429450309|gb|EKZ86205.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec11-9941]
gi|429456066|gb|EKZ91913.1| isopentenyl-diphosphate Delta-isomerase [Escherichia coli O104:H4
str. Ec12-0466]
Length = 182
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K +WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQ-LLVTRRALSKKAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRATDPNGIVENEV 117
Query: 126 ADVYLVTTLNPI 137
V+ T++ +
Sbjct: 118 CPVFAARTISAL 129
>gi|407789217|ref|ZP_11136319.1| NUDIX hydrolase [Gallaecimonas xiamenensis 3-C-1]
gi|407207195|gb|EKE77138.1| NUDIX hydrolase [Gallaecimonas xiamenensis 3-C-1]
Length = 165
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 28/152 (18%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
RS+ D HRT ++ +S L +Q R+ K PG+ D+++ G + +S L SA
Sbjct: 21 RSQFAFGRDIHRTTFIFVL-DSQHRLCVQTRSPHKGYCPGLRDLAAGGVVDWQESYLDSA 79
Query: 87 QRELQEELGINLPKDAFEFVFTFLQQNVINDGKFI-----NNEFADVYLVTTLNPIPLEA 141
+REL EELGI P ++ GKF N FA VY PI
Sbjct: 80 KRELAEELGIEAP--------------LVLMGKFRHKSAGNYSFATVYGCRHDGPI---- 121
Query: 142 FTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVP 173
+ Q EV+ +++A ++ +LA P+F P
Sbjct: 122 -SPQDDEVTGYEWLALDK---VLASPGPAFTP 149
>gi|427385651|ref|ZP_18881958.1| hypothetical protein HMPREF9447_02991 [Bacteroides oleiciplenus YIT
12058]
gi|425726690|gb|EKU89553.1| hypothetical protein HMPREF9447_02991 [Bacteroides oleiciplenus YIT
12058]
Length = 169
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 27 RSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
R E H H ++ +F S EL LQ+R ++KD PG WD S GH+ G+S ++
Sbjct: 25 RGECHSGSKLLHPVIHLHVF-NSKGELYLQKRPEWKDIQPGKWDTSVGGHVDLGESVEMA 83
Query: 86 AQRELQEELGIN--LPKDAFEFVF 107
+RE++EELGI P+ +VF
Sbjct: 84 LKREVREELGITDFTPETITHYVF 107
>gi|237808036|ref|YP_002892476.1| NUDIX hydrolase [Tolumonas auensis DSM 9187]
gi|237500297|gb|ACQ92890.1| NUDIX hydrolase [Tolumonas auensis DSM 9187]
Length = 163
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 5 VVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ-ELLLQRRADFKDS 63
++ EE +D++ G T PRSE+ R HR ++I + Q ++ +QRR KD
Sbjct: 1 MMTEEWVDIVDENNNVIG-TAPRSEMRRQKLLHRA--SYIAITNAQGQVYVQRRTATKDY 57
Query: 64 WPGMWDISSAGHISAGDSSLISAQRELQEELGIN 97
P M D G +SAG+ L SA REL+EE+GI
Sbjct: 58 CPSMLDACCGGVVSAGEDILASAYRELEEEMGIR 91
>gi|363581788|ref|ZP_09314598.1| isopentenyl-diphosphate delta-isomerase [Flavobacteriaceae
bacterium HQM9]
Length = 174
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISA 86
+ E H G HR + ++ ++ EL+LQ+RA K PG+W + H G++SL +A
Sbjct: 21 KIEAHEKGLLHRAFSVFVMNKNG-ELMLQQRALSKYHSPGLWTNTCCSHQREGETSLEAA 79
Query: 87 QRELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQ 145
+R LQEE+G P + F F++ N + + ++ D LV PL +
Sbjct: 80 ERRLQEEMGFVTPLNEKFSFIYKAEFDNGLTEHEY------DHVLVGNYEADPL----IN 129
Query: 146 QTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
E + K++ E K + + S+ P+
Sbjct: 130 TEEAAGWKWMDLEGVKIDIEQHPDSYTPW 158
>gi|455737802|ref|YP_007504068.1| Isopentenyl-diphosphate delta-isomerase [Morganella morganii subsp.
morganii KT]
gi|455419365|gb|AGG29695.1| Isopentenyl-diphosphate delta-isomerase [Morganella morganii subsp.
morganii KT]
Length = 173
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 30 VHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRE 89
VH++G HR + ++F ++ ELL+Q+RA K G+W S H G+S + QR
Sbjct: 23 VHQLGLLHRAFSVFLFNDAG-ELLIQQRALSKYHSGGLWANSCCSHPRRGESLEQATQRR 81
Query: 90 LQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148
LQEELGI P + A ++ + +V +E+ ++ P F+L E
Sbjct: 82 LQEELGITCPLRPAGHIIY---RADV--PPSLTEHEYDHLFTGHYNGP-----FSLNPQE 131
Query: 149 VSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRY 191
V+AV++I+ + K + +D P + + F +I++++
Sbjct: 132 VAAVRWISLTDLKQEM-RDHPQ--------QFAEWFKVIAKKF 165
>gi|29349380|ref|NP_812883.1| NTP pyrophosphohydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|298384909|ref|ZP_06994468.1| NTP pyrophosphohydrolase [Bacteroides sp. 1_1_14]
gi|383120303|ref|ZP_09941032.1| hypothetical protein BSIG_2697 [Bacteroides sp. 1_1_6]
gi|29341289|gb|AAO79077.1| putative NTP pyrophosphohydrolase [Bacteroides thetaiotaomicron
VPI-5482]
gi|298262053|gb|EFI04918.1| NTP pyrophosphohydrolase [Bacteroides sp. 1_1_14]
gi|382985059|gb|EES68736.2| hypothetical protein BSIG_2697 [Bacteroides sp. 1_1_6]
Length = 180
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
+E ++ G TG R E H H ++ +F S +L LQ+R ++KD PG
Sbjct: 7 QEMFPIVDEQGNITGAAT-RGECHSGSKLLHPVIHLHVF-NSKGDLYLQKRPEWKDIQPG 64
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGI 96
WD + GHI G+S I+ +RE++EELGI
Sbjct: 65 KWDTAVGGHIDLGESVEIALKREVREELGI 94
>gi|198276274|ref|ZP_03208805.1| hypothetical protein BACPLE_02466 [Bacteroides plebeius DSM
17135]
gi|198270716|gb|EDY94986.1| hydrolase, NUDIX family [Bacteroides plebeius DSM 17135]
Length = 167
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 8 EEHLDVLTMTGQKTGITKPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPG 66
EE ++ G TG R E H H V+ +F S EL LQ+R ++KD PG
Sbjct: 6 EEMFPIVDEEGNITGAAT-RGECHNGSKLLHPVVHLHVF-NSKGELYLQKRPEWKDIQPG 63
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGIN 97
WD S GH+ G+S ++ +RE EELGI+
Sbjct: 64 KWDTSVGGHVDLGESVEMALKREAGEELGIS 94
>gi|319899928|ref|YP_004159656.1| NUDIX hydrolase [Bacteroides helcogenes P 36-108]
gi|319414959|gb|ADV42070.1| NUDIX hydrolase [Bacteroides helcogenes P 36-108]
Length = 166
Score = 55.8 bits (133), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 12 DVLTMTGQKTGIT--KPRSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
++ + G++ IT R E H H ++ +F S EL LQ+R +KD PG W
Sbjct: 8 EMFPLVGEQGNITGAATRGECHNGSKLLHPVIHLHVF-NSNGELYLQKRPLWKDIQPGKW 66
Query: 69 DISSAGHISAGDSSLISAQRELQEELGIN--LPKDAFEFVF 107
D S GH+ G+S ++ +RE +EELGI P+ ++F
Sbjct: 67 DTSVGGHVDLGESVEMALKREAREELGITGFTPESMTHYIF 107
>gi|365836201|ref|ZP_09377598.1| hydrolase, NUDIX family [Hafnia alvei ATCC 51873]
gi|364564321|gb|EHM42089.1| hydrolase, NUDIX family [Hafnia alvei ATCC 51873]
Length = 204
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL 110
++L+Q+R D KD +PG D ++ G + +G++ L SA+RE +EELGI A +F F
Sbjct: 51 QILVQKRTDNKDFYPGWLDATAGGVVQSGENMLDSARREAEEELGIAGVPFADHGMFYFE 110
Query: 111 QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
Q N + ++ + P F LQ+ EV +V+++ EE + A+ D S
Sbjct: 111 QDNC--------RVWGALFSCVSHGP-----FALQEEEVESVRWMTPEE---ITAECD-S 153
Query: 171 FVP 173
F P
Sbjct: 154 FTP 156
>gi|333926997|ref|YP_004500576.1| isopentenyl-diphosphate delta-isomerase [Serratia sp. AS12]
gi|333931951|ref|YP_004505529.1| isopentenyl-diphosphate delta-isomerase [Serratia plymuthica AS9]
gi|386328820|ref|YP_006024990.1| Isopentenyl-diphosphate Delta-isomerase [Serratia sp. AS13]
gi|333473558|gb|AEF45268.1| Isopentenyl-diphosphate Delta-isomerase [Serratia plymuthica AS9]
gi|333491057|gb|AEF50219.1| Isopentenyl-diphosphate Delta-isomerase [Serratia sp. AS12]
gi|333961153|gb|AEG27926.1| Isopentenyl-diphosphate Delta-isomerase [Serratia sp. AS13]
Length = 179
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 24 TKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83
++ ++ +H+ G HR + +IF +S LLLQ+RA K G+W S GH G+++
Sbjct: 17 SQTKTRIHQQGLLHRAFSIFIF-DSQGRLLLQQRAFSKYHSGGLWTNSCCGHPRWGETTA 75
Query: 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYL 130
+AQR LQEE+G + + V +F+ ++ + G I +EF +Y+
Sbjct: 76 AAAQRRLQEEMGFS---SELQQVSSFIYRSEV-PGDLIEHEFDHIYV 118
>gi|410087511|ref|ZP_11284214.1| Isopentenyl-diphosphate delta-isomerase [Morganella morganii SC01]
gi|421492971|ref|ZP_15940329.1| hypothetical protein MU9_1499 [Morganella morganii subsp. morganii
KT]
gi|400192599|gb|EJO25737.1| hypothetical protein MU9_1499 [Morganella morganii subsp. morganii
KT]
gi|409765955|gb|EKN50053.1| Isopentenyl-diphosphate delta-isomerase [Morganella morganii SC01]
Length = 210
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQR 88
VH++G HR + ++F ++ ELL+Q+RA K G+W S H G+S + QR
Sbjct: 59 RVHQLGLLHRAFSVFLFNDAG-ELLIQQRALSKYHSGGLWANSCCSHPRRGESLEQATQR 117
Query: 89 ELQEELGINLP-KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQT 147
LQEELGI P + A ++ + +V +E+ ++ P F+L
Sbjct: 118 RLQEELGITCPLRPAGHIIY---RADV--PPSLTEHEYDHLFTGHYNGP-----FSLNPQ 167
Query: 148 EVSAVKYIAYEEYKNLLAKDDPSFVPYDVNGGYGQLFNIISQRY 191
EV+AV++I+ + K + +D P + + F +I++++
Sbjct: 168 EVAAVRWISLTDLKQEM-RDHPQ--------QFAEWFKVIAKKF 202
>gi|167765256|ref|ZP_02437369.1| hypothetical protein BACSTE_03644 [Bacteroides stercoris ATCC
43183]
gi|167696884|gb|EDS13463.1| hydrolase, NUDIX family [Bacteroides stercoris ATCC 43183]
Length = 167
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 27 RSEVHRVGDY-HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLIS 85
R E H H ++ +F S EL LQ+R ++KD PG WD S GH+ G+S ++
Sbjct: 25 RGECHNGSKLLHPVIHLHVF-NSKGELYLQKRPEWKDIQPGKWDTSVGGHVDLGESVEMA 83
Query: 86 AQRELQEELGIN--LPKDAFEFVF 107
+RE++EELGI P+ +VF
Sbjct: 84 LKREVREELGITDFAPETITSYVF 107
>gi|350271485|ref|YP_004882793.1| hypothetical protein OBV_30890 [Oscillibacter valericigenes
Sjm18-20]
gi|348596327|dbj|BAL00288.1| hypothetical protein OBV_30890 [Oscillibacter valericigenes
Sjm18-20]
Length = 163
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMW 68
E D+ +K G R G YH V+ WI Q L+ QR + +P W
Sbjct: 3 ELWDLYNQERKKVGRLHERGTPIPKGLYHLVVSIWIVNSQGQYLMSQRHPN--KPYPECW 60
Query: 69 DISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADV 128
+ + G + G++SL A RE++EELG+ L D + ++ + + +F DV
Sbjct: 61 E-CTGGSVLYGENSLHGAVREVEEELGLTLKADTAQLIYQARRDDC--------QDFYDV 111
Query: 129 YLVTTLNPIPLEAFTLQQTEVSAVKYI 155
+ + +P+ + LQ EV A K++
Sbjct: 112 WRFQS--DVPVASLKLQSNEVIAAKWM 136
>gi|117619030|ref|YP_855807.1| nudix hydrolase 3 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117560437|gb|ABK37385.1| nudix hydrolase 3 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 167
Score = 55.8 bits (133), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
M + ++ E +DV+ Q G+ + R++V R HR + E+ + +L+QRR
Sbjct: 1 MNKKGLRVEWVDVVDGNNQVVGVAE-RAKVRRENLCHRASYILVLDEADR-ILVQRRTLS 58
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI-NLPKDAF 103
KD PGM D + G ++ G+ SA+REL EELGI ++P AF
Sbjct: 59 KDFCPGMLDACAGGVVTTGEQMKPSARRELAEELGIRDVPLQAF 102
>gi|238923061|ref|YP_002936574.1| MutT/NUDIX family protein [Eubacterium rectale ATCC 33656]
gi|238874733|gb|ACR74440.1| MutT/NUDIX family protein [Eubacterium rectale ATCC 33656]
Length = 235
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 1 MAESVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADF 60
+ E V E D+ + G R E + YH V+ WI + Q L+ QR A+
Sbjct: 61 IVEYVPDAEIWDLYNENRELLGKDHIRGEQLPIDGYHLVVHVWIRNSNGQYLISQRSAN- 119
Query: 61 KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF 120
+ + P MW+ G + G+ SL RE +EE+GI+L + + +FT ++ I DGK
Sbjct: 120 RPTHPLMWE-CVGGSVVKGEDSLSGVIREAKEEVGIDLMPENGQVLFTKTRK--IIDGK- 175
Query: 121 INNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164
I N+ DV+L + L T EV+ V ++ E+ K L
Sbjct: 176 IYNDIMDVWLFDYDGEVDLGNATTD--EVAQVAWMNGEQIKELF 217
>gi|78191045|gb|ABB29847.1| isopentenyl pyrophosphate isomerase [Nicotiana langsdorffii x
Nicotiana sanderae]
Length = 292
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 19/144 (13%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI---------SAQ 87
HR + ++F S ELLLQ+R+ K ++P +W + H DS LI +AQ
Sbjct: 111 HRAFSVFLF-NSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRDSELIEENALGVRNAAQ 169
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L +ELGI ++P D F + L + +DGK+ +E YL+ T+ + ++
Sbjct: 170 RKLLDELGIPAEDVPVDQFTPLGRILYK-APSDGKWGEHELD--YLLFTVREVNMKP--- 223
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDD 168
EV+ VKY+ E+ K LL K D
Sbjct: 224 NPDEVADVKYVNREQLKELLRKAD 247
>gi|317492643|ref|ZP_07951070.1| NUDIX domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919393|gb|EFV40725.1| NUDIX domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 204
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL 110
++L+Q+R D KD +PG D ++ G + +G++ L SA+RE +EELGI A +F F
Sbjct: 51 QILVQKRTDNKDFYPGWLDATAGGVVQSGENMLDSARREAEEELGIAGVPFADHGMFYFE 110
Query: 111 QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170
Q N + ++ + P F LQ+ EV +V+++ EE + A+ D S
Sbjct: 111 QDNC--------RVWGALFSCVSHGP-----FALQEEEVESVRWMTPEE---ITAECD-S 153
Query: 171 FVP 173
F P
Sbjct: 154 FTP 156
>gi|229917286|ref|YP_002885932.1| NUDIX hydrolase [Exiguobacterium sp. AT1b]
gi|229468715|gb|ACQ70487.1| NUDIX hydrolase [Exiguobacterium sp. AT1b]
Length = 165
Score = 55.8 bits (133), Expect = 9e-05, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+ E D+L Q G T R + +H + + F + LL +R D ++P
Sbjct: 1 MNREVWDLLDENRQPLGRTHFRGDELEPHTFHTVIEVFTFDPDGRLLLSKRHPD--KTYP 58
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
+W+ + G I AG++S A REL+EELG+ + + FV T I G + F
Sbjct: 59 LLWE-GTGGSILAGETSRQGAVRELKEELGLYVLPEQLRFVTT------IKRGTY----F 107
Query: 126 ADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 158
D+Y + PI E +LQ EV V +E
Sbjct: 108 LDMYCLVCEKPIDFERLSLQADEVVDVTLQEWE 140
>gi|425777538|gb|EKV15706.1| Isopentenyl diphosphate isomerase [Penicillium digitatum Pd1]
gi|425779562|gb|EKV17609.1| Isopentenyl diphosphate isomerase [Penicillium digitatum PHI26]
Length = 270
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S + LLLQ+RA K ++P MW + H + D++++
Sbjct: 89 GLLHRAFSVFLF-DSKKRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGAQLDAAILG 147
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+AQR+L ELGI +P D FEF FT + +DGK+ +E + + L
Sbjct: 148 VKRAAQRKLDHELGIKAEQVPLDKFEF-FTRIHYKAPSDGKWGEHEVDYILFIQVDVDLE 206
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P P EV Y++ +E K + + F P+
Sbjct: 207 PSP--------NEVRDTTYVSADELKAMFEQPGLKFTPW 237
>gi|13603406|dbj|BAB40973.1| isopentenyl diphosphate isomerase 1 [Nicotiana tabacum]
Length = 290
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 19/144 (13%)
Query: 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI---------SAQ 87
HR + ++F S ELLLQ+R+ K ++P +W + H DS LI +AQ
Sbjct: 109 HRAFSVFLF-NSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRDSELIEENALGVRNAAQ 167
Query: 88 RELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL 144
R+L +ELGI ++P D F + L + +DGK+ +E YL+ T+ + ++
Sbjct: 168 RKLLDELGIPAEDVPVDQFTPLGRILYK-APSDGKWGEHELD--YLLFTVREVNMKP--- 221
Query: 145 QQTEVSAVKYIAYEEYKNLLAKDD 168
EV+ VKY+ E+ K LL K D
Sbjct: 222 NPDEVADVKYVNREQLKELLRKAD 245
>gi|21627818|emb|CAD37150.1| isopentenyl-diphosphate delta-isomerase [Aspergillus fumigatus]
Length = 234
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Query: 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHI--------SAGDSSLI- 84
G HR + ++F +S LLLQ+RA K ++P MW + H + D++++
Sbjct: 53 GLLHRAFSVFLF-DSNNRLLLQQRASEKITFPDMWTNTCCSHPLGIPGETGAELDAAVLG 111
Query: 85 ---SAQRELQEELGI---NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTT---LN 135
+AQR+L +ELGI +P + FEF FT + +DGK+ +E + + LN
Sbjct: 112 VKRAAQRKLDQELGIKAEQVPLEKFEF-FTRIHYKAPSDGKWGEHEIDYILFIQADVDLN 170
Query: 136 PIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPSFVPY 174
P EV KY++ +E K + + F P+
Sbjct: 171 VNP--------NEVRDTKYVSAQELKQMFTQPGLKFTPW 201
>gi|386706143|ref|YP_006169990.1| Isopentenyl-diphosphate Delta-isomerase [Escherichia coli P12b]
gi|383104311|gb|AFG41820.1| Isopentenyl-diphosphate Delta-isomerase [Escherichia coli P12b]
Length = 182
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 6 VQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWP 65
+Q EH+ +L G TG + + H ++W+F Q LL+ RRA K++WP
Sbjct: 1 MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQ-LLVTRRALSKNAWP 59
Query: 66 GMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEF 125
G+W S GH G+S+ + R + ELG+ + E ++ + + + NE
Sbjct: 60 GVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENEV 117
Query: 126 ADVYLVTT 133
V+ T
Sbjct: 118 CPVFAART 125
>gi|433634799|ref|YP_007268426.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140070017]
gi|432166392|emb|CCK63887.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140070017]
Length = 203
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGD--YHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
E + +L G TG+ ++ VH GD H ++++F + +LL+ RRA K +WP
Sbjct: 12 ERVVLLNDRGDATGVAD-KATVH-TGDTPLHLAFSSYVF-DLHDQLLITRRAATKRTWPA 68
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT-FLQQNVINDGKFINNEF 125
+W S GH G+S + +R L ELG L D + + F + + DG + NE
Sbjct: 69 VWTNSCCGHPLPGESLPGAIRRRLAAELG--LTPDRVDLILPGFRYRAAMADGT-VENEI 125
Query: 126 ADVYLVTT-LNPIPLEAFTLQQTEVSAVKYIAYEEY 160
VY V P P EV A++++++E++
Sbjct: 126 CPVYRVQVDQQPRP------NSDEVDAIRWLSWEQF 155
>gi|433641880|ref|YP_007287639.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140070008]
gi|432158428|emb|CCK55722.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140070008]
Length = 203
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGD--YHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
E + +L G TG+ ++ VH GD H ++++F + +LL+ RRA K +WP
Sbjct: 12 ERVVLLNDRGDATGVAD-KATVH-TGDTPLHLAFSSYVF-DLHDQLLITRRAATKRTWPA 68
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT-FLQQNVINDGKFINNEF 125
+W S GH G+S + +R L ELG L D + + F + + DG + NE
Sbjct: 69 VWTNSCCGHPLPGESLPGAIRRRLAAELG--LTPDRVDLILPGFRYRAAMADGT-VENEI 125
Query: 126 ADVYLVTT-LNPIPLEAFTLQQTEVSAVKYIAYEEY 160
VY V P P EV A++++++E++
Sbjct: 126 CPVYRVQVDQQPRP------NSDEVDAIRWLSWEQF 155
>gi|15608883|ref|NP_216261.1| Probable isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium tuberculosis H37Rv]
gi|15841209|ref|NP_336246.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CDC1551]
gi|148661544|ref|YP_001283067.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
H37Ra]
gi|148822952|ref|YP_001287706.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
F11]
gi|167968640|ref|ZP_02550917.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
H37Ra]
gi|253799213|ref|YP_003032214.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
KZN 1435]
gi|254231938|ref|ZP_04925265.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis C]
gi|254364581|ref|ZP_04980627.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis str. Haarlem]
gi|254550759|ref|ZP_05141206.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289443208|ref|ZP_06432952.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T46]
gi|289447361|ref|ZP_06437105.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis CPHL_A]
gi|289569803|ref|ZP_06450030.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T17]
gi|289574416|ref|ZP_06454643.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis K85]
gi|289745815|ref|ZP_06505193.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis 02_1987]
gi|289750304|ref|ZP_06509682.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T92]
gi|289753836|ref|ZP_06513214.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
EAS054]
gi|289757855|ref|ZP_06517233.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T85]
gi|289761904|ref|ZP_06521282.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
GM 1503]
gi|294996656|ref|ZP_06802347.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
210]
gi|297634301|ref|ZP_06952081.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
KZN 4207]
gi|297731288|ref|ZP_06960406.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
KZN R506]
gi|298525243|ref|ZP_07012652.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
94_M4241A]
gi|306775933|ref|ZP_07414270.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu001]
gi|306779752|ref|ZP_07418089.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu002]
gi|306784486|ref|ZP_07422808.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu003]
gi|306788852|ref|ZP_07427174.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu004]
gi|306793187|ref|ZP_07431489.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu005]
gi|306797568|ref|ZP_07435870.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu006]
gi|306803449|ref|ZP_07440117.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu008]
gi|306808028|ref|ZP_07444696.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu007]
gi|306967847|ref|ZP_07480508.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu009]
gi|306972043|ref|ZP_07484704.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu010]
gi|307079754|ref|ZP_07488924.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu011]
gi|307084333|ref|ZP_07493446.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu012]
gi|313658620|ref|ZP_07815500.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
KZN V2475]
gi|339631798|ref|YP_004723440.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium africanum
GM041182]
gi|340626753|ref|YP_004745205.1| putative isopentenyl-diphosphate delta-isomerase IDI [Mycobacterium
canettii CIPT 140010059]
gi|375296463|ref|YP_005100730.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis KZN 4207]
gi|385991134|ref|YP_005909432.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CCDC5180]
gi|385994741|ref|YP_005913039.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CCDC5079]
gi|385998521|ref|YP_005916819.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CTRI-2]
gi|386004707|ref|YP_005922986.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
RGTB423]
gi|392386418|ref|YP_005308047.1| idi [Mycobacterium tuberculosis UT205]
gi|392432673|ref|YP_006473717.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis KZN 605]
gi|397673608|ref|YP_006515143.1| isopentenyl-diphosphate Delta-isomerase [Mycobacterium tuberculosis
H37Rv]
gi|422812737|ref|ZP_16861121.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis CDC1551A]
gi|424804085|ref|ZP_18229516.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis W-148]
gi|424947464|ref|ZP_18363160.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
NCGM2209]
gi|433626840|ref|YP_007260469.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140060008]
gi|433630843|ref|YP_007264471.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140070010]
gi|6226829|sp|P72002.1|IDI_MYCTU RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|166226216|sp|A5U3A5.1|IDI_MYCTA RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP
isomerase; AltName: Full=IPP:DMAPP isomerase; AltName:
Full=Isopentenyl pyrophosphate isomerase
gi|13881432|gb|AAK46060.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CDC1551]
gi|124600997|gb|EAY60007.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis C]
gi|134150095|gb|EBA42140.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis str. Haarlem]
gi|148505696|gb|ABQ73505.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
H37Ra]
gi|148721479|gb|ABR06104.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis F11]
gi|253320716|gb|ACT25319.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis KZN 1435]
gi|289416127|gb|EFD13367.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T46]
gi|289420319|gb|EFD17520.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis CPHL_A]
gi|289538847|gb|EFD43425.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis K85]
gi|289543557|gb|EFD47205.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T17]
gi|289686343|gb|EFD53831.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis 02_1987]
gi|289690891|gb|EFD58320.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T92]
gi|289694423|gb|EFD61852.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
EAS054]
gi|289709410|gb|EFD73426.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
GM 1503]
gi|289713419|gb|EFD77431.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis T85]
gi|298495037|gb|EFI30331.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
94_M4241A]
gi|308215681|gb|EFO75080.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu001]
gi|308327319|gb|EFP16170.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu002]
gi|308330844|gb|EFP19695.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu003]
gi|308334664|gb|EFP23515.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu004]
gi|308338451|gb|EFP27302.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu005]
gi|308342090|gb|EFP30941.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu006]
gi|308345648|gb|EFP34499.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu007]
gi|308349875|gb|EFP38726.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu008]
gi|308354584|gb|EFP43435.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu009]
gi|308358561|gb|EFP47412.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu010]
gi|308362399|gb|EFP51250.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu011]
gi|308366051|gb|EFP54902.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis SUMu012]
gi|323719839|gb|EGB28953.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis CDC1551A]
gi|326903361|gb|EGE50294.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis W-148]
gi|328458968|gb|AEB04391.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis KZN 4207]
gi|339294695|gb|AEJ46806.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CCDC5079]
gi|339298327|gb|AEJ50437.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CCDC5180]
gi|339331154|emb|CCC26834.1| putative isopentenyl-diphosphate delta-isomerase IDI (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium africanum GM041182]
gi|340004943|emb|CCC44091.1| putative isopentenyl-diphosphate delta-isomerase IDI (IPP
isomerase) (Isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140010059]
gi|344219567|gb|AEN00198.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
CTRI-2]
gi|358231979|dbj|GAA45471.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
NCGM2209]
gi|378544969|emb|CCE37244.1| idi [Mycobacterium tuberculosis UT205]
gi|379027982|dbj|BAL65715.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
str. Erdman = ATCC 35801]
gi|380725195|gb|AFE12990.1| isopentenyl-diphosphate delta-isomerase [Mycobacterium tuberculosis
RGTB423]
gi|392054082|gb|AFM49640.1| isopentenyl-diphosphate delta-isomerase idi [Mycobacterium
tuberculosis KZN 605]
gi|395138513|gb|AFN49672.1| isopentenyl-diphosphate Delta-isomerase [Mycobacterium tuberculosis
H37Rv]
gi|432154446|emb|CCK51680.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140060008]
gi|432162436|emb|CCK59812.1| Putative isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium canettii CIPT 140070010]
gi|440581214|emb|CCG11617.1| putative isopentenyl-diphosphate delta-isomerase IDI (IPP
isomerase) (Isopentenyl pyrophosphate isomerase)
[Mycobacterium tuberculosis 7199-99]
gi|444895255|emb|CCP44511.1| Probable isopentenyl-diphosphate delta-isomerase Idi (IPP
isomerase) (isopentenyl pyrophosphate isomerase)
[Mycobacterium tuberculosis H37Rv]
Length = 203
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 9 EHLDVLTMTGQKTGITKPRSEVHRVGD--YHRTVNAWIFAESTQELLLQRRADFKDSWPG 66
E + +L G TG+ ++ VH GD H ++++F + +LL+ RRA K +WP
Sbjct: 12 ERVVLLNDRGDATGVAD-KATVH-TGDTPLHLAFSSYVF-DLHDQLLITRRAATKRTWPA 68
Query: 67 MWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFT-FLQQNVINDGKFINNEF 125
+W S GH G+S + +R L ELG L D + + F + + DG + NE
Sbjct: 69 VWTNSCCGHPLPGESLPGAIRRRLAAELG--LTPDRVDLILPGFRYRAAMADGT-VENEI 125
Query: 126 ADVYLVTT-LNPIPLEAFTLQQTEVSAVKYIAYEEY 160
VY V P P EV A++++++E++
Sbjct: 126 CPVYRVQVDQQPRP------NSDEVDAIRWLSWEQF 155
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,022,033,890
Number of Sequences: 23463169
Number of extensions: 505678257
Number of successful extensions: 1265912
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 1292
Number of HSP's that attempted gapping in prelim test: 1262303
Number of HSP's gapped (non-prelim): 2904
length of query: 779
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 628
effective length of database: 8,816,256,848
effective search space: 5536609300544
effective search space used: 5536609300544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)