Query 004012
Match_columns 779
No_of_seqs 326 out of 2026
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 11:23:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fvy_A Dipeptidyl-peptidase 3; 100.0 4E-131 1E-135 1135.7 37.8 551 210-778 17-681 (728)
2 3csk_A Probable dipeptidyl-pep 100.0 2E-127 7E-132 1098.3 45.4 550 211-778 14-684 (711)
3 3dup_A MUTT/nudix family prote 99.9 2.2E-26 7.7E-31 245.8 20.0 194 6-211 87-287 (300)
4 2pny_A Isopentenyl-diphosphate 99.9 2.4E-24 8.2E-29 225.1 17.3 161 6-174 35-215 (246)
5 2dho_A Isopentenyl-diphosphate 99.9 3.7E-24 1.3E-28 222.3 18.2 161 6-174 24-204 (235)
6 1hzt_A Isopentenyl diphosphate 99.9 2.3E-23 7.8E-28 208.6 13.2 159 6-174 1-161 (190)
7 2fkb_A Putative nudix hydrolas 99.8 1.9E-20 6.6E-25 185.1 17.9 147 4-165 5-151 (180)
8 1q27_A Putative nudix hydrolas 99.8 3.2E-20 1.1E-24 182.0 17.0 145 4-166 2-151 (171)
9 1sjy_A MUTT/nudix family prote 99.7 2E-15 6.9E-20 145.3 17.5 127 29-167 5-134 (159)
10 3i7u_A AP4A hydrolase; nudix p 99.7 5.5E-16 1.9E-20 146.6 13.2 110 37-164 4-113 (134)
11 3grn_A MUTT related protein; s 99.6 4.8E-15 1.6E-19 142.3 16.5 114 35-163 6-119 (153)
12 3oga_A Nucleoside triphosphata 99.6 5.8E-15 2E-19 143.6 14.9 125 32-163 22-149 (165)
13 3r03_A Nudix hydrolase; struct 99.6 6.9E-15 2.4E-19 139.2 14.5 114 35-163 6-119 (144)
14 3eds_A MUTT/nudix family prote 99.6 4.9E-16 1.7E-20 149.7 5.9 124 27-165 11-137 (153)
15 1rya_A GDP-mannose mannosyl hy 99.6 1.2E-14 4.2E-19 139.9 14.9 119 37-163 18-138 (160)
16 3u53_A BIS(5'-nucleosyl)-tetra 99.6 1.8E-14 6.1E-19 139.0 15.3 116 38-165 4-127 (155)
17 1ktg_A Diadenosine tetraphosph 99.6 3.8E-14 1.3E-18 133.1 16.9 114 36-164 2-119 (138)
18 3shd_A Phosphatase NUDJ; nudix 99.6 2.9E-14 9.9E-19 136.6 15.4 108 37-160 5-112 (153)
19 3gwy_A Putative CTP pyrophosph 99.6 1.8E-14 6.2E-19 136.2 13.7 109 38-163 7-116 (140)
20 3hhj_A Mutator MUTT protein; n 99.6 1.6E-14 5.6E-19 139.3 13.6 115 34-163 26-140 (158)
21 2o1c_A DATP pyrophosphohydrola 99.6 2.5E-14 8.5E-19 135.8 13.9 115 37-163 9-132 (150)
22 2pbt_A AP4A hydrolase; nudix p 99.6 2.4E-14 8.2E-19 133.6 13.3 110 37-164 4-113 (134)
23 3fcm_A Hydrolase, nudix family 99.6 5.9E-14 2E-18 141.1 16.4 125 32-165 40-169 (197)
24 4dyw_A MUTT/nudix family prote 99.6 2.5E-14 8.7E-19 138.3 13.2 115 34-162 26-140 (157)
25 3exq_A Nudix family hydrolase; 99.5 2E-14 6.8E-19 139.7 11.9 116 33-163 6-121 (161)
26 3ees_A Probable pyrophosphohyd 99.5 3.6E-14 1.2E-18 135.3 13.1 110 37-163 21-130 (153)
27 3gg6_A Nudix motif 18, nucleos 99.5 1.2E-14 4.1E-19 139.9 9.6 116 33-164 16-131 (156)
28 1vcd_A NDX1; nudix protein, di 99.5 1.3E-13 4.5E-18 127.3 15.3 106 38-164 3-108 (126)
29 3e57_A Uncharacterized protein 99.5 1.2E-14 4.1E-19 147.7 8.5 130 22-165 52-190 (211)
30 2b0v_A Nudix hydrolase; struct 99.5 7.8E-14 2.7E-18 133.3 13.5 112 38-163 9-120 (153)
31 3son_A Hypothetical nudix hydr 99.5 2.3E-13 8E-18 129.8 16.7 115 39-164 7-125 (149)
32 1v8y_A ADP-ribose pyrophosphat 99.5 6.7E-14 2.3E-18 137.0 12.9 113 39-167 36-148 (170)
33 2azw_A MUTT/nudix family prote 99.5 7E-14 2.4E-18 132.7 12.3 115 36-164 17-131 (148)
34 1f3y_A Diadenosine 5',5'''-P1, 99.5 4E-14 1.4E-18 136.7 10.7 123 32-165 9-147 (165)
35 2rrk_A ORF135, CTP pyrophospho 99.5 6.4E-14 2.2E-18 131.6 11.8 110 37-163 8-117 (140)
36 1nqz_A COA pyrophosphatase (MU 99.5 4.8E-14 1.7E-18 141.1 11.6 125 26-164 24-152 (194)
37 3f6a_A Hydrolase, nudix family 99.5 4.4E-14 1.5E-18 136.6 9.8 114 35-163 4-133 (159)
38 2b06_A MUTT/nudix family prote 99.5 5.4E-14 1.8E-18 135.0 10.2 111 34-163 5-119 (155)
39 3q93_A 7,8-dihydro-8-oxoguanin 99.5 1.1E-13 3.7E-18 136.8 12.3 112 36-163 23-134 (176)
40 2w4e_A MUTT/nudix family prote 99.5 6.5E-14 2.2E-18 133.6 9.7 116 38-167 6-121 (145)
41 3cng_A Nudix hydrolase; struct 99.5 1.7E-13 6E-18 136.8 12.8 120 22-161 20-144 (189)
42 2yvp_A NDX2, MUTT/nudix family 99.5 7E-14 2.4E-18 138.3 9.8 117 38-167 42-158 (182)
43 2pqv_A MUTT/nudix family prote 99.5 9.4E-14 3.2E-18 133.3 10.3 113 35-163 17-129 (154)
44 3id9_A MUTT/nudix family prote 99.5 1.3E-13 4.3E-18 134.9 11.3 117 32-163 18-135 (171)
45 3q91_A Uridine diphosphate glu 99.5 6.7E-14 2.3E-18 143.4 9.6 143 11-168 18-193 (218)
46 3i9x_A MUTT/nudix family prote 99.5 7.6E-14 2.6E-18 139.0 9.8 119 35-162 25-154 (187)
47 2kdv_A RNA pyrophosphohydrolas 99.5 3.1E-13 1.1E-17 132.0 12.7 118 35-163 6-135 (164)
48 3h95_A Nucleoside diphosphate- 99.4 3.4E-13 1.2E-17 135.8 12.6 115 38-164 27-141 (199)
49 3o6z_A GDP-mannose pyrophospha 99.4 4.7E-13 1.6E-17 134.1 12.8 120 37-167 45-170 (191)
50 2yyh_A MUTT domain, 8-OXO-DGTP 99.4 7E-13 2.4E-17 124.9 13.3 108 37-161 9-119 (139)
51 1mk1_A ADPR pyrophosphatase; n 99.4 2.3E-13 7.8E-18 138.1 10.1 118 38-167 44-162 (207)
52 1vhz_A ADP compounds hydrolase 99.4 5.3E-13 1.8E-17 134.6 12.4 113 39-166 51-163 (198)
53 2jvb_A Protein PSU1, mRNA-deca 99.4 4.2E-13 1.4E-17 127.4 11.1 112 38-166 5-117 (146)
54 1vk6_A NADH pyrophosphatase; 1 99.4 7.6E-13 2.6E-17 139.7 14.1 118 26-162 124-245 (269)
55 1g0s_A Hypothetical 23.7 kDa p 99.4 9.7E-13 3.3E-17 133.8 13.5 121 38-167 58-183 (209)
56 3q1p_A Phosphohydrolase (MUTT/ 99.4 5.5E-13 1.9E-17 135.1 11.5 111 37-163 68-178 (205)
57 2fvv_A Diphosphoinositol polyp 99.4 5.2E-13 1.8E-17 134.3 11.1 116 34-166 38-153 (194)
58 1mut_A MUTT, nucleoside tripho 99.4 3.3E-14 1.1E-18 131.5 1.7 104 43-163 10-113 (129)
59 2fb1_A Conserved hypothetical 99.4 2.9E-13 1E-17 139.4 8.9 114 36-162 12-127 (226)
60 3fk9_A Mutator MUTT protein; s 99.4 9E-13 3.1E-17 131.7 12.1 110 37-162 4-113 (188)
61 3o8s_A Nudix hydrolase, ADP-ri 99.4 7.2E-13 2.4E-17 134.4 11.3 110 37-163 70-179 (206)
62 3gz5_A MUTT/nudix family prote 99.4 6.4E-13 2.2E-17 138.1 11.2 113 36-161 21-137 (240)
63 2fml_A MUTT/nudix family prote 99.4 7.1E-13 2.4E-17 140.4 11.5 117 36-164 38-158 (273)
64 2qjt_B Nicotinamide-nucleotide 99.4 2.6E-12 8.9E-17 140.2 15.5 121 35-163 206-329 (352)
65 3f13_A Putative nudix hydrolas 99.4 3.8E-12 1.3E-16 124.4 12.9 98 34-158 13-110 (163)
66 2qjo_A Bifunctional NMN adenyl 99.3 2.6E-12 8.8E-17 139.5 11.7 118 35-163 201-322 (341)
67 1k2e_A Nudix homolog; nudix/MU 99.3 4.9E-12 1.7E-16 122.0 12.4 55 38-100 2-56 (156)
68 1x51_A A/G-specific adenine DN 99.3 5.2E-12 1.8E-16 121.4 11.1 99 49-163 33-133 (155)
69 2a6t_A SPAC19A8.12; alpha/beta 99.3 3.1E-12 1E-16 135.3 8.2 112 38-165 102-214 (271)
70 2dsc_A ADP-sugar pyrophosphata 99.3 8.1E-12 2.8E-16 127.1 10.7 106 50-165 77-185 (212)
71 1u20_A U8 snoRNA-binding prote 99.3 7.1E-12 2.4E-16 127.7 9.0 123 26-162 22-164 (212)
72 3qsj_A Nudix hydrolase; struct 99.2 1.9E-10 6.5E-15 118.7 15.3 126 36-170 8-195 (232)
73 3fjy_A Probable MUTT1 protein; 99.2 6.4E-11 2.2E-15 130.3 10.9 108 49-165 37-160 (364)
74 3fsp_A A/G-specific adenine gl 99.1 2.1E-10 7.1E-15 126.6 9.6 104 38-162 241-344 (369)
75 1q33_A Pyrophosphatase, ADP-ri 99.0 7.3E-10 2.5E-14 118.4 11.9 104 51-161 140-260 (292)
76 2xsq_A U8 snoRNA-decapping enz 98.8 1.6E-09 5.6E-14 110.7 4.2 97 50-161 65-171 (217)
77 3kvh_A Protein syndesmos; NUDT 98.4 1.3E-07 4.5E-12 93.1 5.1 121 25-161 8-147 (214)
78 3rh7_A Hypothetical oxidoreduc 98.3 2.5E-06 8.7E-11 92.0 10.7 91 38-162 184-275 (321)
79 3bho_A Cleavage and polyadenyl 98.3 5.2E-06 1.8E-10 82.8 11.9 116 32-160 54-182 (208)
80 2ovx_A Matrix metalloproteinas 68.1 1 3.5E-05 43.0 -0.1 18 593-610 110-127 (159)
81 2xs4_A Karilysin protease; hyd 65.8 1.1 3.8E-05 43.0 -0.4 18 593-610 114-131 (167)
82 1cge_A Fibroblast collagenase; 65.7 1.2 4.2E-05 42.8 -0.1 18 593-610 110-127 (168)
83 2jsd_A Matrix metalloproteinas 65.4 1.1 3.9E-05 42.5 -0.4 18 593-610 107-124 (160)
84 1hy7_A Stromelysin-1, MMP-3; m 63.8 1.3 4.3E-05 42.9 -0.4 18 593-610 112-129 (173)
85 1hv5_A Stromelysin 3; inhibiti 61.3 1.7 5.7E-05 41.7 -0.1 18 593-610 112-129 (165)
86 1slm_A Stromelysin-1; hydrolas 55.4 2.4 8.2E-05 43.7 -0.1 18 593-610 194-211 (255)
87 3nxq_A Angiotensin-converting 54.5 12 0.0004 43.6 5.4 55 595-656 356-413 (629)
88 1i76_A MMP-8;, neutrophil coll 52.4 2.6 8.9E-05 40.3 -0.4 17 594-610 112-128 (163)
89 3ayu_A 72 kDa type IV collagen 50.8 3.2 0.00011 39.9 -0.1 16 594-609 114-129 (167)
90 1y93_A Macrophage metalloelast 48.7 3.6 0.00012 39.2 -0.1 17 593-609 107-123 (159)
91 3p1v_A Metallo-endopeptidase; 43.1 5.7 0.0002 43.5 0.4 17 592-608 285-301 (407)
92 2y6d_A Matrilysin; hydrolase; 43.1 4.4 0.00015 39.1 -0.4 17 593-609 114-130 (174)
93 2w15_A Zinc metalloproteinase 42.1 5.4 0.00018 39.3 -0.0 15 594-608 136-150 (202)
94 830c_A MMP-13, MMP-13; matrix 42.0 5.2 0.00018 38.5 -0.1 17 594-610 113-129 (168)
95 1rm8_A MMP-16, matrix metallop 41.8 4.9 0.00017 38.5 -0.3 18 593-610 116-133 (169)
96 1sat_A Serratia protease; para 40.4 5.3 0.00018 44.9 -0.4 16 595-610 171-186 (471)
97 1kuf_A Atrolysin E, metallopro 40.3 5.9 0.0002 39.1 -0.0 15 594-608 138-152 (203)
98 1kap_P Alkaline protease; calc 40.1 5.3 0.00018 45.0 -0.4 17 594-610 179-195 (479)
99 2ddf_A ADAM 17; hydrolase; HET 39.1 6.4 0.00022 40.2 -0.0 15 594-608 182-196 (257)
100 1bud_A Protein (acutolysin A); 38.8 6.5 0.00022 38.5 -0.0 15 594-608 133-147 (197)
101 1qua_A Acutolysin-C, hemorrhag 38.7 6.5 0.00022 38.5 -0.0 15 594-608 135-149 (197)
102 1g9k_A Serralysin; beta jelly 38.6 5.8 0.0002 44.5 -0.4 17 594-610 163-179 (463)
103 1atl_A Atrolysin C; metalloend 38.1 6.8 0.00023 38.6 -0.0 14 595-608 137-150 (202)
104 1yp1_A FII; FII hydrolase; 1.9 38.0 6.8 0.00023 38.6 -0.0 14 595-608 136-149 (202)
105 3b8z_A Protein adamts-5; alpha 38.0 6.8 0.00023 39.0 -0.0 15 594-608 141-155 (217)
106 1k7i_A PROC, secreted protease 37.4 6.3 0.00021 44.4 -0.4 16 595-610 183-198 (479)
107 3ma2_D Matrix metalloproteinas 36.9 7 0.00024 38.1 -0.1 17 594-610 122-138 (181)
108 4dd8_A Disintegrin and metallo 36.4 7.4 0.00025 38.5 -0.0 14 595-608 134-147 (208)
109 2v4b_A Adamts-1; zymogen, prot 34.1 8.5 0.00029 40.3 -0.0 15 594-608 143-157 (300)
110 1l6j_A Matrix metalloproteinas 33.9 8.4 0.00029 42.6 -0.1 17 594-610 376-392 (425)
111 2rjp_A Adamts-4; metalloprotea 32.7 9.3 0.00032 40.4 -0.0 15 594-608 143-157 (316)
112 1r55_A ADAM 33; metalloproteas 32.5 9.4 0.00032 37.9 -0.0 15 594-608 136-150 (214)
113 2i47_A ADAM 17; TACE-inhibitor 32.1 9.6 0.00033 39.6 -0.0 15 594-608 188-202 (288)
114 1c7k_A NCNP, zinc endoprotease 30.9 9.2 0.00032 35.4 -0.3 14 595-608 78-91 (132)
115 2rjq_A Adamts-5; metalloprotea 30.5 11 0.00036 40.9 -0.0 15 594-608 143-157 (378)
116 3ba0_A Macrophage metalloelast 28.2 11 0.00037 40.8 -0.4 17 594-610 107-123 (365)
117 1eak_A 72 kDa type IV collagen 27.5 13 0.00043 41.1 -0.1 17 594-610 366-382 (421)
118 3lqb_A Hatching enzyme, LOC792 27.0 12 0.00042 36.9 -0.3 17 594-610 93-109 (199)
119 3k7n_A K-like; SVMP, hydrolase 26.9 13 0.00046 40.6 -0.0 15 594-608 139-153 (397)
120 2e3x_A Coagulation factor X-ac 26.4 15 0.00053 40.5 0.4 15 595-609 140-154 (427)
121 3edh_A Bone morphogenetic prot 26.2 13 0.00044 36.8 -0.2 18 594-611 87-104 (201)
122 3k7l_A Atragin; SVMP, metallop 25.7 14 0.0005 40.7 -0.0 15 594-608 144-158 (422)
123 2ero_A VAP-1, vascular apoptos 25.7 15 0.0005 40.7 -0.0 15 595-609 147-161 (427)
124 2dw0_A Catrocollastatin; apopt 24.9 15 0.00053 40.4 -0.0 15 595-609 138-152 (419)
125 4axq_A Archaemetzincin; metall 24.8 15 0.0005 35.2 -0.2 16 594-609 114-129 (163)
126 2cki_A Ulilysin; metalloprotea 24.3 16 0.00053 37.8 -0.1 19 594-612 162-180 (262)
127 1su3_A Interstitial collagenas 23.6 16 0.00056 40.6 -0.1 17 594-610 193-209 (450)
128 1uze_A Angiotensin converting 23.3 41 0.0014 38.7 3.2 52 597-655 344-398 (589)
129 3lq0_A Proastacin; metallopept 21.3 15 0.00053 37.2 -0.9 16 595-610 121-136 (235)
No 1
>3fvy_A Dipeptidyl-peptidase 3; SGC, DPP3, alternative splicing, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, phosphoprotein; 1.90A {Homo sapiens} PDB: 3t6b_A 3t6j_A
Probab=100.00 E-value=4.1e-131 Score=1135.66 Aligned_cols=551 Identities=18% Similarity=0.245 Sum_probs=467.9
Q ss_pred cccccchhccCCCHHHHHHHHHHHHHHHhhchhheeccCCCChhHHHHHHhccccc------------hhh--H--HHHH
Q 004012 210 AHVSLNAELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADAS------------ELD--K--LKWM 273 (779)
Q Consensus 210 ~pv~l~~df~~Ls~~Ek~y~~~l~~Aa~~g~~i~~~Q~~~e~~~i~~~i~~~~~~~------------~~~--~--~~l~ 273 (779)
....++..|+.||++||+|||||++|||+|+||+++|+||||+.||++|+.+.... .++ + ..|+
T Consensus 17 ~~L~~~~~F~~Lt~keK~Yah~ls~Aa~~G~~I~l~Q~s~es~~I~~ll~~i~~~~~~~~~~~~~~~~~~~~~e~~~fl~ 96 (728)
T 3fvy_A 17 SSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLHQHALAEGLTEEEYQAFLV 96 (728)
T ss_dssp EECCCHHHHHTSCHHHHHHHHHHHHHHHHHHTHHHHTTCSSHHHHHHHHHHHHHHSCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEehHHhHhhCCHHHHHHHHHHHHHHHcCCCEEEEeCCcccHHHHHHHHHHHHhCCchhHHHHHHhcCCCHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999874211 111 1 2377
Q ss_pred H---hhhcCCCCCCCCCCCcCccCch-hHhhhcCCCC--------CCcCcccccc---cccCC----CCCCCCC-CCCCC
Q 004012 274 Y---YLINKSPWSSLDENEAFLTTAD-SAVKLLPDAT--------KPVNGWKGLE---YKASF----PLPKPPG-ANFYP 333 (779)
Q Consensus 274 y---~~~N~gn~~~~~~d~kFip~~~-~~~~~~~~~~--------~~~~~~~~~~---~~~~~----~~~~~~g-s~yYp 333 (779)
| |+.|+|||++| ||+||||+++ +.|+++++.+ ...++|+.|. |+..+ .|++++| |||||
T Consensus 97 Y~~~f~~n~Gny~~f-Gd~KfiP~~s~~~f~~l~~~s~~~~~~~~~~~~l~~~~~~~if~~~~~~~~lg~~~~g~s~YY~ 175 (728)
T 3fvy_A 97 YAAGVYSNMGNYKSF-GDTKFVPNLPKEKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFS 175 (728)
T ss_dssp HHHHHHHHTSSBCTT-TCBBCCCSSCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHHHHCCCGGGSBBCSGGGCBCSSBC
T ss_pred HHHHHHhccCCccCC-CCCCcCCCCCHHHHHHHHHhCchhhccchhHHHHHHHhhHHhccCCcccccCCCCCCCccCCCC
Confidence 8 48999999999 5999999997 7899887532 2245777654 76554 3667778 99999
Q ss_pred CCCCHHHHHHHHhhccHhhhhhcCCCceEEEecC--c----c-cccccccccccccC------CccccCCCceEEeeccc
Q 004012 334 PDMDKMEFELWKSSLTEKQQEDATSFFTVIKRRS--E----F-NLDSSLSGHIVDAT------NHSVGSIYDLYSVPYSE 400 (779)
Q Consensus 334 ~~it~~e~~~~~~~~~~~~~~~~~~~~t~~~r~~--~----~-~~~as~~~~~~~~~------~~~~~~~g~~~~v~y~g 400 (779)
++||++|++++++.| +.+++.++||||+|.. + + +++||++++..... .......|+.+.+. +|
T Consensus 176 ~~iT~~eie~v~~~~---~~~~i~~~NTRl~K~~~~~g~~~~~i~~AS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G 251 (728)
T 3fvy_A 176 GNCTMEDAKLAQDFL---DSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVT-RG 251 (728)
T ss_dssp TTCCHHHHHHHHHHH---HHTTCCSTTEEEEEEECTTCCEEEEEEEECSSCCC----CTTGGGCSEEEETTEEEEEE-EE
T ss_pred CCCCHHHHHHHHHHH---HhCCCchhcceEEEEecCCCcceEEEEEEeecccCCccccccccccccccccCceeeec-CC
Confidence 999999999999998 4577899999999972 2 3 49999875421110 00101135555565 49
Q ss_pred ccHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhccCcc---hhhhHhhhcc-CCeeeeeeccccccccCcCCccccc
Q 004012 401 EYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSNNY---YDSDIAWIEL-DSELDVTIGPYETYEDAIFGYKATF 476 (779)
Q Consensus 401 ~y~~~l~~i~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg~~---~~s~~~Wv~~-~~~ve~~iGfiEtY~Dp~~g~ka~~ 476 (779)
||+++|++||.+|++|++||+|++|++||++||++|+|||+ ++||++||+| +|+||++||||||||||+ |+||+|
T Consensus 252 dy~~~l~ki~~~L~kA~~~A~N~~qk~~L~~yi~~F~TGdl~~~k~s~~~WvkD~~p~VE~~iGFIEtYrDP~-G~Rae~ 330 (728)
T 3fvy_A 252 DYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPF-GSRGEF 330 (728)
T ss_dssp ETHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSCSCSEEEEEEEEECSSSTT-SCSCEE
T ss_pred chHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCceeeeecCceecCCCC-CCceeE
Confidence 99999999999999999999999999999999999999965 7899999999 999999999999999995 999999
Q ss_pred eeeeeecChHHHHHHHHHhhhHHHHHHhCCCCcccccCCcCCCCceEEeeeeccCCCCCCccceecCCCchhHHhhccce
Q 004012 477 EAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPNDERIVKDRGTS 556 (779)
Q Consensus 477 E~~V~i~d~~~s~k~~~l~~~a~~~~~~LPw~~~~~k~~~~~~~~~~~~vl~~~g~~~~~~~~giNlPN~~~ir~~~G~K 556 (779)
||||+|+|+++|+||++|+++||+|+++|||+++|||++|..||||||+||+||||+ +|+|||||||||||+++|||
T Consensus 331 EgfVai~d~e~T~kl~~lv~~a~~~~~~LPw~~~feKd~f~~pdftsl~vl~~aGsg---~p~GINLPNyd~IR~~~GfK 407 (728)
T 3fvy_A 331 EGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDVLTFAGSG---IPAGINIPNYDDLRQTEGFK 407 (728)
T ss_dssp EEEEEECCHHHHHHHHHHHHTHHHHHHTSSSCGGGSCSSCCCCCCCEEEEEEEESSC---CCSEEEECCCHHHHHHTCCE
T ss_pred EEEEEEeCHHHHHHHHHHHHHHHHHHHhCCCCchhccCccCCCCceEEEeHhhcCCC---CccceeCCChHHHHHhcCee
Confidence 999999999999999999999999999999999999999999999999999999996 69999999999999999999
Q ss_pred eEEecchhhhhhhcccccccccccChhhHhhhcc---ccchhhhhhhhc-ccccCCCCcccC----------------C-
Q 004012 557 MVMLKNVSEAKFKNILRPIADVCIRKEQQELVDF---DSFFTHNICHEC-CHGIGPHSITLP----------------D- 615 (779)
Q Consensus 557 ~v~l~Nv~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~lHEl-gHg~G~~~~~~~----------------~- 615 (779)
||+|+|||+|++.....++ .||+++|++++.+ .+|++||++||| ||||||++...+ |
T Consensus 408 nVsLgNvl~A~~~~~~~~i--~fi~~~~~~l~~k~~~~af~~~v~lHElLGHGsGkll~~~~~G~~NFD~~~~~~p~tg~ 485 (728)
T 3fvy_A 408 NVSLGNVLAVAYATQREKL--TFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGE 485 (728)
T ss_dssp EEEEHHHHTTSSCCSGGGC--TTBCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCBBCTTSCBSSCTTTCBCTTTSS
T ss_pred EEEeeeehhhhhcccccCC--CccCHHHHHHHHHhccchHhHHHHHHHhccCcCCcccccCCCCccccccccCCCCCCCC
Confidence 9999999999864322222 4999999998875 499999999999 999999664221 1
Q ss_pred ------CcccccchhhhhccchHHhHHHHHHHHHHH--HHHHhC-CCCChhhHHHHHHHHHHH---HHhhhcc------C
Q 004012 616 ------GRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIGR-DLLPKSLVKSMYVSFLAG---CFRSVRF------G 677 (779)
Q Consensus 616 ------~~~~t~~~~~~~~~s~~EE~rAd~~glyl~--~~l~~~-g~~~~~~~~~~y~~~l~~---~~~~l~f------~ 677 (779)
.+|+||+++||+++||+||||||+||||+| ++|+++ |+.+.++.+++|++||.+ |+++++| +
T Consensus 486 ~i~swY~pgeT~~s~fg~~ast~EEcRAdlvgLYl~~~~~lleifG~~~~~a~d~~Y~~~L~~~~~Gl~~l~f~~p~~~~ 565 (728)
T 3fvy_A 486 QIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPEAFN 565 (728)
T ss_dssp BCCCCBCTTCCHHHHSTTTHHHHHHHHHHHHHHHHTTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHGGGGEEGGGTE
T ss_pred cceeeccCCCcHHHHHhcccchHHHHHHHHHHHHHcCCHHHHHHcCCCccchhhhHHHHHHHHHHHhhheeeeecCCCCc
Confidence 158999999999999999999999999999 679998 998767889999999976 6688988 2
Q ss_pred ccchhhhHHHHHHHHHHhcCC-EEE---e--cC----CcEEEehhhHH----HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004012 678 LEESHGKGQALQFNWLFEKEA-FIL---H--SD----DTFSVDFDKVE----GAVESLSTEILTIQARGDKEAASLLLQK 743 (779)
Q Consensus 678 ~~qaH~~a~~~i~~~l~e~g~-~~~---~--~~----g~~~vD~~k~~----~av~~ll~~l~~~k~~gD~~~~~~l~~~ 743 (779)
|+||||||||+|++||+++|. ++. + ++ ++++||++||+ +||++||++||+||||||+++|++||++
T Consensus 566 w~qAH~qar~~il~~lle~G~~~v~~~~~~~~~g~~~~~i~vD~sKi~~~g~~avg~lL~~l~~~KstgD~~aa~~l~e~ 645 (728)
T 3fvy_A 566 WRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEG 645 (728)
T ss_dssp ESCHHHHHHHHHHHHHHHTCTTSEEEEEEECTTSSEEEEEEECGGGTTTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHcCCCeEEEEEecccCCCCcEEEEeeHHHHhhhhHHHHHHHHHHHHeeeecCCHHHHHHHHHh
Confidence 999999999999999999996 432 2 12 45799999995 6999999999999999999999999999
Q ss_pred hcCCCHh-------HHH-HHHhhhccCCCcccccchhhhhhhc
Q 004012 744 YCTMTQP-------LKV-ALQKLENVQVPVDIAPTFTAVNKLL 778 (779)
Q Consensus 744 ~~~v~~~-------~~~-~l~~~~~~~~p~di~~~~~~~~~~~ 778 (779)
|++|+++ +++ +|+|.+ |+. .|+|.||++
T Consensus 646 y~~v~~~~~~~~~~~r~iVl~rk~----Prk---~FVQ~nt~l 681 (728)
T 3fvy_A 646 YATVTDAPPECFLTLRDTVLLRKE----SRK---LIVQPNTRL 681 (728)
T ss_dssp HTCCCCCTTTCHHHHHHHHHHTCC----CCC---EEECCEEEE
T ss_pred ccccCcccchhHHHHHHHHHhccC----CCc---eeecCcEEE
Confidence 9999876 444 555443 666 899999875
No 2
>3csk_A Probable dipeptidyl-peptidase 3; Zn-hydrolase, aminodipeptidase, hexxgh-motif, aminopeptidase hydrolase, metal-binding, metalloprotease; 1.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-127 Score=1098.30 Aligned_cols=550 Identities=17% Similarity=0.238 Sum_probs=466.2
Q ss_pred ccccc-hhccCCCHHHHHHHHHHHHHHHhhchhheeccCCCChhHHHHHHhcccc-c-h------hh--H--HHHHH---
Q 004012 211 HVSLN-AELAGLSDADKEALVLVIKAATVMDEIFYLQVWYSNPVLRDWLKEHADA-S-E------LD--K--LKWMY--- 274 (779)
Q Consensus 211 pv~l~-~df~~Ls~~Ek~y~~~l~~Aa~~g~~i~~~Q~~~e~~~i~~~i~~~~~~-~-~------~~--~--~~l~y--- 274 (779)
...++ ..|+.||++||+|||||++|||+|++|+++|+||||++||++|..+... . . ++ + ..|+|
T Consensus 14 ~l~~~~~~F~~Lt~keK~yahyls~As~~G~~I~~~Q~spes~~I~~ll~~i~~~~~~~~~~~~g~~~~e~~~~l~Y~~~ 93 (711)
T 3csk_A 14 MLSVKTEYFPQLTDKEQKYAHFMSKASHAGSRVVMRQVSHESEPIFDLILAIHSKLNGKYPEDDITQKQQTGLYLEYVSQ 93 (711)
T ss_dssp ECCCTTTTGGGSCHHHHHHHHHHHHHHHTTHHHHHHHHCTTHHHHHHHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHH
T ss_pred EEEechHhhhhCCHHHHHHHHHHHHHHhcCCceeEeecCcCcHHHHHHHHHHHHhcCcchhhhcCCCHHHHHHHHHHHHH
Confidence 34566 8899999999999999999999999999999999999999999986311 1 1 22 1 23777
Q ss_pred hhhcCCCCCCCCCCCcCccCch-hHhhh---cCC-CCCCcCccc--------------------ccc---cccCC----C
Q 004012 275 YLINKSPWSSLDENEAFLTTAD-SAVKL---LPD-ATKPVNGWK--------------------GLE---YKASF----P 322 (779)
Q Consensus 275 ~~~N~gn~~~~~~d~kFip~~~-~~~~~---~~~-~~~~~~~~~--------------------~~~---~~~~~----~ 322 (779)
|++|+|||++| ||+||||+++ +.|++ ++. ++....+|+ .|. |+..+ .
T Consensus 94 f~~n~Gny~~f-Gd~KfiP~~~~e~f~~~l~lv~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~if~~~~~~~~l 172 (711)
T 3csk_A 94 FLSNLGNFKSF-GDTKFIPRCEVKFFKQLLELAKINPSSSPLTLSPVDVNHEFTSHHLFSTINELIDIGIYHVEEKAALL 172 (711)
T ss_dssp HHHHTSSBCTT-TCBBCBCSSCHHHHHHHHHHTTCCTTSCGGGGSCTTSCGGGSSGGGCSSHHHHHHTTTTCCCTTTTBB
T ss_pred HHhccCCcccC-CcccccCCCCHHHHHHHHHHHHhCchhhhhhhccccccccchhhhhhhhhHhhhcCceecCCcchhhc
Confidence 58999999999 5999999997 78887 664 344555665 222 66655 2
Q ss_pred CCCCCC--CCCCCC-CCCHHHHHHH-HhhccHhhhhhcCCCceEEEecCc---ccccccc-cccccccC--C--ccccCC
Q 004012 323 LPKPPG--ANFYPP-DMDKMEFELW-KSSLTEKQQEDATSFFTVIKRRSE---FNLDSSL-SGHIVDAT--N--HSVGSI 390 (779)
Q Consensus 323 ~~~~~g--s~yYp~-~it~~e~~~~-~~~~~~~~~~~~~~~~t~~~r~~~---~~~~as~-~~~~~~~~--~--~~~~~~ 390 (779)
+.++.| |||||+ +||++|++++ ++.| +.+++.++||||+|.++ ..++||+ ++++.... . .....+
T Consensus 173 g~~~~g~~s~YY~~~~iT~~eie~~~~~~~---~~~~~~p~NtRl~K~~~~~~ei~~AS~~~~~~~~~~~~~~~~~~~~~ 249 (711)
T 3csk_A 173 GFPSQGYTSAYYLGLPVTPEDMALLKEQLF---AELAILPENTRINKVGENSFQIWVASENVKNQITETYPSGQITLSNA 249 (711)
T ss_dssp SCGGGTCBCTTEEESCCCHHHHHHHHHHTH---HHHTCCCTTEEEEEEETTEEEEEEECSCSSCCCTTTSCCSEEECTTS
T ss_pred CCCCCCceeecCCCCCCCHHHHHHHHHHhh---hhcCCcccceeEEecCCCeEEEEEeeccccCCccccccccccccccC
Confidence 556677 999986 8999999999 8888 45788999999999865 3489998 55432111 0 001124
Q ss_pred CceEEeecccccHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhccC---cchhhhHhhhcc-CCeeeeeeccccccc
Q 004012 391 YDLYSVPYSEEYNSYLTRASELLHKAGDMASSPSLKRLLHSKADAFLSN---NYYDSDIAWIEL-DSELDVTIGPYETYE 466 (779)
Q Consensus 391 g~~~~v~y~g~y~~~l~~i~~~L~~A~~~a~n~~q~~~L~~~~~~f~tg---~~~~s~~~Wv~~-~~~ve~~iGfiEtY~ 466 (779)
|..+.+. +|||+++|++||.+|++|++||+|++|++||++||++|+|| +|++||++||+| +|+||++||||||||
T Consensus 250 g~~v~~~-~Gdy~~~l~ki~~~L~kA~~~a~N~~q~~~L~~~i~~F~TGsl~~~~~s~~~WvkD~~p~VE~~iGFiEtY~ 328 (711)
T 3csk_A 250 VTKVEFI-FGDHSREMRLVASYLKEAQKFAANDTQKAMLQEYINHFVTGSSQAHKEAQKLWVKDISPVIETNIGFIETYR 328 (711)
T ss_dssp CCEEEEE-EEETHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCSCSEEEEEEEEECSS
T ss_pred CceEEEe-cCchHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhccCCceEEeecCceecc
Confidence 5555555 49999999999999999999999999999999999999998 689999999999 999999999999999
Q ss_pred cCcCCccccceeeeeecChHHHHHHHHHhhhHHHHHHhCCCCcccccCCcCCCCceEEeeeeccCCCCCCccceecCCCc
Q 004012 467 DAIFGYKATFEAFIGIRDDKATAQVKLFGDNLQVLEQNLPMDNAYKSKDVIAAPIRVIQLIYNSGDVKGPQTVAFNLPND 546 (779)
Q Consensus 467 Dp~~g~ka~~E~~V~i~d~~~s~k~~~l~~~a~~~~~~LPw~~~~~k~~~~~~~~~~~~vl~~~g~~~~~~~~giNlPN~ 546 (779)
||+ |+||+|||||+|+|+++|+||++|+++||+|+++|||+++|||+.|..||||||+||+||||+ +|+|||||||
T Consensus 329 DP~-G~Rae~EgfVai~d~e~s~k~~~lv~~a~~~~~~LPw~~~fekd~f~~pdftsl~vl~~aGsg---~p~GINLPN~ 404 (711)
T 3csk_A 329 EPS-GIIGEFESLVAIQNKERTAKFSSLVNNAEEFISLLPWSKDYEKPIFNPPDFTSLEVLTFTGSG---IPAGINIPNY 404 (711)
T ss_dssp STT-SCSCEEEEEEEECCHHHHHHHHHHHHTHHHHHHHSSSCGGGSCSSCCCCCCCEEEEEEEESSC---CCSEEEECCC
T ss_pred CCC-CCceeeEEEEEEeCHHHHHHHHHHHHHHHHHHHhCCCChhhcccccCCCCceeeehhhhcCCC---ccceeECCCc
Confidence 995 999999999999999999999999999999999999999999999999999999999999994 7999999999
Q ss_pred hhHHhhccceeEEecchhhhhhhcc-cccccccccChhhHhhhccc---cchhhhhhhhc-ccccCCCCcccC-------
Q 004012 547 ERIVKDRGTSMVMLKNVSEAKFKNI-LRPIADVCIRKEQQELVDFD---SFFTHNICHEC-CHGIGPHSITLP------- 614 (779)
Q Consensus 547 ~~ir~~~G~K~v~l~Nv~~a~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~v~lHEl-gHg~G~~~~~~~------- 614 (779)
||||+++|||||+|+|||+|+.+.. ..|+ .||+++|++++.++ +|++||++||| ||||||++....
T Consensus 405 d~IR~~~G~KnVsLgNv~~A~~~~~~~~~i--~fi~~~~~~~~~ky~~~af~~~v~lHElLGHGsGkl~~~~~~g~NFd~ 482 (711)
T 3csk_A 405 DDVRLKIGFKNVSLGNILSAAAKSSSKHPP--SFISQEDRPIFEKYQSDSFEVQVDIHELLGHGSGKLLTEFTDGFNFDK 482 (711)
T ss_dssp HHHHHHTCCEEEEEHHHHHHHHHTCCSSCC--TTBCTTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCBEETTEESSCS
T ss_pred HHHHHhcCeeEEEEeeeeccccccccCCcc--eeeCHHHHHHHHHhccccHhhhHhHHHhccccccccccccCCCccccc
Confidence 9999999999999999999983211 2444 49999999999754 99999999999 999999764321
Q ss_pred --------C-------CcccccchhhhhccchHHhHHHHHHHHHHH--HHHHh-CCCCC-hhhHHHHHHHHHHH---HHh
Q 004012 615 --------D-------GRQSTVRLELQELHSAMEEAKADIVGLWAL--KFLIG-RDLLP-KSLVKSMYVSFLAG---CFR 672 (779)
Q Consensus 615 --------~-------~~~~t~~~~~~~~~s~~EE~rAd~~glyl~--~~l~~-~g~~~-~~~~~~~y~~~l~~---~~~ 672 (779)
| .+|+||+++||+++|||||||||+||||+| +++++ +|+.+ .++.+++|++||.| |+|
T Consensus 483 ~~~~~~ltg~~i~twY~pG~T~~s~fg~~ast~EEcRAdlvgLYl~~d~~~leifG~~~~~~~~~~~Y~~yL~m~~aGl~ 562 (711)
T 3csk_A 483 ENPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEECRAEVIAMFLLTNKKILDIFGFHDVESQDKVIYAGYLQMARAGLL 562 (711)
T ss_dssp SSCCBCTTSSBCCCCBCTTCCHHHHHGGGHHHHHHHHHHHHHHHHTTCHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCccceecCCCCcHHHHHhhhhhhHHHHHHHHHHHHHhcCccHHHHcCCCchhhHHHHHHHHHHHHHHhhcc
Confidence 1 168999999999999999999999999999 78999 59988 45889999999865 788
Q ss_pred hhcc------CccchhhhHHHHHHHHHHhcCC---EE-E--ecCC---cEEEehhhH----HHHHHHHHHHHHHHHhcCC
Q 004012 673 SVRF------GLEESHGKGQALQFNWLFEKEA---FI-L--HSDD---TFSVDFDKV----EGAVESLSTEILTIQARGD 733 (779)
Q Consensus 673 ~l~f------~~~qaH~~a~~~i~~~l~e~g~---~~-~--~~~g---~~~vD~~k~----~~av~~ll~~l~~~k~~gD 733 (779)
+|+| .|+|||||||++|++||+++|. ++ . +++| ++++||+|| ++||++||++||+||||||
T Consensus 563 sL~f~~p~~~kw~qAH~~ar~~il~~lle~G~~~~~v~i~~~~~g~~~~i~~D~sKi~~~g~~avg~lL~~lq~~KstgD 642 (711)
T 3csk_A 563 ALEYWNPKTGKWGQPHMQARFSIMKTFMKHSTDKNFLKLEMNSTNDDFAIKLDKSLIKTAGHECVKDYLKHLHVYKCSGD 642 (711)
T ss_dssp GGGGBCTTTCCBSCHHHHHHHHHHHHHHHSSSSTTSEEEEECTTSSCEEEEECGGGTTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEECCCCCccchhhHHHHHHHHHHHHHcCCCCceEEEEEcCCCCeEEEEecHHHHHhhHHHHHHHHHHHHHhhhhccC
Confidence 9988 2999999999999999999983 33 2 3355 568899999 5599999999999999999
Q ss_pred HHHHHHHHHHhcCCCHhH---HH-HHHhhhccCCCcccccchhhhhhhc
Q 004012 734 KEAASLLLQKYCTMTQPL---KV-ALQKLENVQVPVDIAPTFTAVNKLL 778 (779)
Q Consensus 734 ~~~~~~l~~~~~~v~~~~---~~-~l~~~~~~~~p~di~~~~~~~~~~~ 778 (779)
+++|++||++|+.||+++ ++ ||+|. .|+. .|+|.|+++
T Consensus 643 ~~aa~~l~e~y~~Vd~~~~~lr~~Vl~rk----~Prk---~FVqpnt~l 684 (711)
T 3csk_A 643 VEQGSKYFIDRSTVTPDLASLRDIVLSKR----LPRR---QFIQSNSYI 684 (711)
T ss_dssp HHHHHHHHHHHTCCCHHHHTTHHHHHHTC----CCCC---EEECCEEEE
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHhcc----CCcc---eeEcceEEE
Confidence 999999999999999955 44 66554 5887 788888765
No 3
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.94 E-value=2.2e-26 Score=245.78 Aligned_cols=194 Identities=15% Similarity=0.019 Sum_probs=163.5
Q ss_pred cccccEEEECCCC-ccccccccccccccCCceeEEEEEEEEecCCC---EEEEEEeCCCCCCCCCCeeccccccCCCCCC
Q 004012 6 VQEEHLDVLTMTG-QKTGITKPRSEVHRVGDYHRTVNAWIFAESTQ---ELLLQRRADFKDSWPGMWDISSAGHISAGDS 81 (779)
Q Consensus 6 ~~~E~~~vvd~~~-~~~G~~~~R~~~h~~g~~hr~v~v~V~~~~~g---kVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt 81 (779)
|++|+++|||+++ ++++. ++|+.+|.+|++|++|++++++. ++ +|||+||+..|..|||+|++.|||++++|||
T Consensus 87 wr~E~~~V~~~~~~~~~~~-~eR~~~~~~G~~~~~vh~~~~~~-~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs 164 (300)
T 3dup_A 87 PRGELYRVNQSWGEPTLML-LDRAVVPTFGVRAYGVHLNGYVG-AGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLS 164 (300)
T ss_dssp CCSCEEEECSSTTSCCCEE-EEGGGTGGGTCCEEEEEEEEEES-CGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSC
T ss_pred cccccEEeecCCCCeeeEE-EEhhhccccceEEEEEEEEEEEe-cCCeeEEEEEeCCCcccCCCCccccccccCCCCCCC
Confidence 7999999999986 67765 89999999999999999999984 45 8999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHhCCccCC-CCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHH
Q 004012 82 SLISAQRELQEELGINLPK-DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160 (779)
Q Consensus 82 ~~eAAlREl~EEtGl~v~~-~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl 160 (779)
+.+||+||+.||+||++.. ..+..++.+.|....+.| ..+++.++|.+.++.+.. +.++++|+++++|+|++|+
T Consensus 165 ~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G--~~~E~~~vy~~~l~~~~~---p~~~~~EV~~~~~v~~~El 239 (300)
T 3dup_A 165 LRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAG--IKPDTLFLYDLALPEDFR---PHNTDGEMADFMLWPAAKV 239 (300)
T ss_dssp HHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTE--EEEEEEEEEEEECCTTCC---CCCTTSSEEEEEEEEHHHH
T ss_pred HHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCC--eEEEEEEEEEEEecCCCc---CCCCchHhheEEEECHHHH
Confidence 9999999999999998643 346677776665444444 467888999888755432 4678899999999999999
Q ss_pred HhHHhcCCCCcccCCCCcchHHHHHHHHHH--hhhhhhhhHHHHHHHhhhhcc
Q 004012 161 KNLLAKDDPSFVPYDVNGGYGQLFNIISQR--YKENTMERSLTLQKQLRRYAH 211 (779)
Q Consensus 161 ~~~l~~~~~~f~p~~~~~~~~~~f~~l~~~--~~~~~~~r~~~L~~~l~rf~p 211 (779)
.+++.+ ++.|+||+ ...+++++.++ +.+.+.+.+.+|.++|+|..-
T Consensus 240 ~~~l~~-pg~F~p~~----~lV~ldfl~RhG~i~~~~~~~y~~i~~~l~r~~~ 287 (300)
T 3dup_A 240 VEAVRT-TEAFKFNV----NLTVIDFAIRHGLIDPDNEPDYQEILAGLRGRPR 287 (300)
T ss_dssp HHHHHH-CCCBCTTH----HHHHHHHHHHTTSSCTTTSTTHHHHHHHTBCC--
T ss_pred HHHHhc-CCCcCccH----HHHHHHHHHHhCCcCCccCCCHHHHHHHhccChh
Confidence 999987 68899996 45789999887 667778999999999988654
No 4
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=225.10 Aligned_cols=161 Identities=25% Similarity=0.382 Sum_probs=136.2
Q ss_pred cccccEEEECCCCccccccccccccc-----cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCC-
Q 004012 6 VQEEHLDVLTMTGQKTGITKPRSEVH-----RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG- 79 (779)
Q Consensus 6 ~~~E~~~vvd~~~~~~G~~~~R~~~h-----~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~G- 79 (779)
+++|+++|||++++++|. .+|..+| ..|.+|++++++|++ .+|+|||+||+..|..+||+|++|+|||+++|
T Consensus 35 ~~~E~~~lvd~~~~~iG~-~~r~~~h~~~~~~~g~~h~av~v~v~~-~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~ 112 (246)
T 2pny_A 35 RLEEMLIVVDENDKVIGA-DTKRNCHLNENIEKGLLHRAFSVVLFN-TKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNP 112 (246)
T ss_dssp HTTCEEEEECTTCCEEEE-EEHHHHTBHHHHTTTCCEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCBCCSEEECCBSSH
T ss_pred hccceEEEEcCCCCEEEE-EEhHHhccccccCCCcEEEEEEEEEEe-CCCEEEEEEecCCCCCCCCceEeccCceeccCC
Confidence 568999999999999997 6899999 789999999999998 57899999999999999999999988999999
Q ss_pred -----CCH---HHHHHHHHHHHhCCccCC---CCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccc
Q 004012 80 -----DSS---LISAQRELQEELGINLPK---DAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148 (779)
Q Consensus 80 -----Et~---~eAAlREl~EEtGl~v~~---~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~E 148 (779)
|++ .+||+||++|||||.+.. .++..++.+.|.... .+.+..+++.++|.+.... .+.++++|
T Consensus 113 ~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~-~~~~~~~e~~~vf~~~~~~-----~~~~~~~E 186 (246)
T 2pny_A 113 AELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKS-DRIWGEHEICYLLLVRKNV-----TLNPDPSE 186 (246)
T ss_dssp HHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEES-SSSBEEEEEEEEEEEECCC-----CCCCCTTT
T ss_pred cccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecC-CCceeeeEEEEEEEEEECC-----CCCCChHH
Confidence 887 999999999999998542 247788887765432 2335567888899887532 24678899
Q ss_pred eeeEEEeCHHHHHhHHhc---CCCCcccC
Q 004012 149 VSAVKYIAYEEYKNLLAK---DDPSFVPY 174 (779)
Q Consensus 149 v~e~~Wv~~eEl~~~l~~---~~~~f~p~ 174 (779)
+.+++|++++++.+++.. ++..|+||
T Consensus 187 v~~~~wv~~eel~~~l~~~~~~~~~ftp~ 215 (246)
T 2pny_A 187 TKSILYLSQEELWELLEREARGEVKVTPW 215 (246)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTSSCBCHH
T ss_pred eeEEEEEeHHHHHHHHHhccCCCceECHh
Confidence 999999999999999877 55689998
No 5
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.91 E-value=3.7e-24 Score=222.26 Aligned_cols=161 Identities=25% Similarity=0.422 Sum_probs=135.7
Q ss_pred cccccEEEECCCCccccccccccccc-----cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCC-
Q 004012 6 VQEEHLDVLTMTGQKTGITKPRSEVH-----RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAG- 79 (779)
Q Consensus 6 ~~~E~~~vvd~~~~~~G~~~~R~~~h-----~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~G- 79 (779)
+++|+++|||++++++|. .+|..+| ..|.+|++++++|++ .+|+|||+||+..|..+||+|++|+|||+++|
T Consensus 24 ~~~E~~~lvd~~~~~~G~-~~r~~~h~~~~~~~g~~h~av~v~v~~-~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge 101 (235)
T 2dho_A 24 LLAEMCILIDENDNKIGA-ETKKNCHLNENIEKGLLHRAFSVFLFN-TENKLLLQQRSDAKITFPGCFTNTCCSHPLSNP 101 (235)
T ss_dssp SSCCEEEEECTTCCEEEE-EEHHHHTBHHHHTTTCCEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCEESSEEECCBSSH
T ss_pred hcCcEEEEEcCCCCEEEE-EEhHHhccccccCCCceEEEEEEEEEc-CCCEEEEEEecCcCCCCCCcEEeccCceecCCC
Confidence 569999999999999997 6899999 789999999999998 57899999999999999999999988999999
Q ss_pred -----CC---HHHHHHHHHHHHhCCccC---CCCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccc
Q 004012 80 -----DS---SLISAQRELQEELGINLP---KDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTE 148 (779)
Q Consensus 80 -----Et---~~eAAlREl~EEtGl~v~---~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~E 148 (779)
|+ +.+||+||++|||||.+. ..++..++.+.|.... .+.+..++++++|.+.... .+.++++|
T Consensus 102 ~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~-~~~~~~~e~~~vf~~~~~~-----~~~~~~~E 175 (235)
T 2dho_A 102 AELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQS-DGIWGEHEIDYILLVRMNV-----TLNPDPNE 175 (235)
T ss_dssp HHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEEC-SSSBEEEEEEEEEEEECCC-----CCCCCTTT
T ss_pred cccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccC-CCccceeEEEEEEEEEECC-----CCcCChHH
Confidence 88 499999999999999854 2357788887765432 2335567888999887532 24678899
Q ss_pred eeeEEEeCHHHHHhHHhc---CCCCcccC
Q 004012 149 VSAVKYIAYEEYKNLLAK---DDPSFVPY 174 (779)
Q Consensus 149 v~e~~Wv~~eEl~~~l~~---~~~~f~p~ 174 (779)
+.+++|++++++.+++.. ++..|+||
T Consensus 176 v~~~~wv~~~el~~~l~~~~~~~~~ftp~ 204 (235)
T 2dho_A 176 IKSYCYVSKEELKELLKKAASGEIKITPW 204 (235)
T ss_dssp EEEEEEECHHHHHHHHHHHHTTSSCBCHH
T ss_pred EEEEEEEcHHHHHHHHhhccCCCcEECHh
Confidence 999999999999999876 45589998
No 6
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.89 E-value=2.3e-23 Score=208.62 Aligned_cols=159 Identities=25% Similarity=0.439 Sum_probs=102.0
Q ss_pred cccccEEEECCCCccccccccccccc-cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHH
Q 004012 6 VQEEHLDVLTMTGQKTGITKPRSEVH-RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLI 84 (779)
Q Consensus 6 ~~~E~~~vvd~~~~~~G~~~~R~~~h-~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~e 84 (779)
|++|+++|||++++++|. ++|..+| ..|.+|+++.++|++ .+++|||++|+..+..+||.|++|+||++++|||+.+
T Consensus 1 ~~~E~~~v~d~~~~~~g~-~~r~~~~~~~~~~~~~v~~~i~~-~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~ 78 (190)
T 1hzt_A 1 MQTEHVILLNAQGVPTGT-LEKYAAHTADTRLHLAFSSWLFN-AKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNED 78 (190)
T ss_dssp -------------------------------CEECEEEEEEC-TTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHH
T ss_pred CCceEEEEECCCCCEeee-EEHhhhcccCCceEEEEEEEEEc-CCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHH
Confidence 678999999999999996 7899999 899999999999998 5789999999887788899999933999999999999
Q ss_pred HHHHHHHHHhCCccCCCCe-EEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 85 SAQRELQEELGINLPKDAF-EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 85 AAlREl~EEtGl~v~~~~l-~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
||+||++||||+.+.. + ..++.+.+....+++ ...+.+.++|.+..... +.++++|+.+++|++++++.++
T Consensus 79 aa~REl~EEtGl~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~-----~~~~~~E~~~~~W~~~~el~~~ 150 (190)
T 1hzt_A 79 AVIRRCRYELGVEITP--PESIYPDFRYRATDPSG-IVENEVCPVFAARTTSA-----LQINDDEVMDYQWCDLADVLHG 150 (190)
T ss_dssp HHHHHHHHHHCCCBSC--CEEEETTCEEEEECTTS-CEEEEECCEEEEEBCSC-----CCCCTTTEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHCCCchh--hheeeeeEEEEeeCCCC-CcceEEEEEEEEecCCC-----CcCCccceeeEEEecHHHHHHH
Confidence 9999999999999754 4 444444443222222 12355677887775322 3566789999999999999999
Q ss_pred HhcCCCCcccC
Q 004012 164 LAKDDPSFVPY 174 (779)
Q Consensus 164 l~~~~~~f~p~ 174 (779)
+..++..|.||
T Consensus 151 ~~~~~~~~~p~ 161 (190)
T 1hzt_A 151 IDATPWAFSPW 161 (190)
T ss_dssp HHHCGGGBCHH
T ss_pred HHcChhhcCch
Confidence 88776678887
No 7
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.85 E-value=1.9e-20 Score=185.07 Aligned_cols=147 Identities=26% Similarity=0.344 Sum_probs=118.1
Q ss_pred cccccccEEEECCCCccccccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHH
Q 004012 4 SVVQEEHLDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL 83 (779)
Q Consensus 4 ~~~~~E~~~vvd~~~~~~G~~~~R~~~h~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~ 83 (779)
|.+++|+|+|||++++++|. .+|..++..+..|+++++++++ .+++|||++|+..+..+||+|++|+||++++|||+.
T Consensus 5 ~~~~~E~~~i~d~~~~~~g~-~~r~~~~~~~~~~~~~~v~i~~-~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~ 82 (180)
T 2fkb_A 5 RLASTEWVDIVNEENEVIAQ-ASREQMRAQCLRHRATYIVVHD-GMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLL 82 (180)
T ss_dssp ---CCCEEEEECTTSCEEEE-EEHHHHHHHTCCEEEEEEEEEC-SSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHH
T ss_pred ccCCCeeEEEECCCCCEeeE-EEHHHhhccCceeeEEEEEEEC-CCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHH
Confidence 56789999999999999997 6899999999999999999998 478999999988777789999994499999999999
Q ss_pred HHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 84 ISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 84 eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+||+||++||||+.+. .+..++.+.+.. + ..+...++|.+... . .+.++++|+.++.|++++++.++
T Consensus 83 ~aa~REl~EEtGl~~~--~~~~l~~~~~~~----~--~~~~~~~~f~~~~~-~----~~~~~~~E~~~~~W~~~~el~~~ 149 (180)
T 2fkb_A 83 ESARREAEEELGIAGV--PFAEHGQFYFED----K--NCRVWGALFSCVSH-G----PFALQEDEVSEVCWLTPEEITAR 149 (180)
T ss_dssp HHHHHHHHHHHCCBSC--CCEEEEEEEEEE----T--TEEEEEEEEEEECC-C----CCCCCTTTEEEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHCCCcc--ceEEEEEEEecC----C--CceEEEEEEEEecC-C----CcCCChhHhheEEEecHHHHHHH
Confidence 9999999999999864 356666655432 1 12456677777632 1 23566789999999999999876
Q ss_pred Hh
Q 004012 164 LA 165 (779)
Q Consensus 164 l~ 165 (779)
+.
T Consensus 150 ~~ 151 (180)
T 2fkb_A 150 CD 151 (180)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 8
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.84 E-value=3.2e-20 Score=182.00 Aligned_cols=145 Identities=22% Similarity=0.327 Sum_probs=118.4
Q ss_pred cccccccEEEECCCCcccccccccccc---ccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCee-ccccccCCCC
Q 004012 4 SVVQEEHLDVLTMTGQKTGITKPRSEV---HRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWD-ISSAGHISAG 79 (779)
Q Consensus 4 ~~~~~E~~~vvd~~~~~~G~~~~R~~~---h~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~-~PvGG~ve~G 79 (779)
|..++|+++|||.+++++|. ++|..+ |.. |+++++++++ .+++|||+||+..+..++|.|+ +| ||++++|
T Consensus 2 ~~~~~E~~~~~d~~~~~~g~-~~r~~~~l~~~~---~~~v~v~i~~-~~~~vLl~~r~~~~~~~~g~w~~~P-gG~ve~g 75 (171)
T 1q27_A 2 GGVSDERLDLVNERDEVVGQ-ILRTDPALRWER---VRVVNAFLRN-SQGQLWIPRRSPSKSLFPNALDVSV-GGAVQSG 75 (171)
T ss_dssp CCCCSSEEEEESSSSCEEEE-EESSCTTSCTTS---CEEEEEEEEE-TTTEEEECCSCCSSSCCCCSCCCSE-EEECSSS
T ss_pred CcccceeeeeecCCCCEece-EEhhhhcccccc---ceEEEEEEEC-CCCeEEEEEecCCCCCCCCcccccc-CccccCC
Confidence 34579999999999999997 789998 766 9999999998 4789999999877778899999 88 9999999
Q ss_pred CCHHHHHHHHHHHHhCCccCCCCeEEEEEEE-eecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHH
Q 004012 80 DSSLISAQRELQEELGINLPKDAFEFVFTFL-QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 158 (779)
Q Consensus 80 Et~~eAAlREl~EEtGl~v~~~~l~~l~~~~-~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~e 158 (779)
||+.+||+||++||||+.+....+..++.+. +.. .. .. +.++|.+.. .. .+.++++|+.+++|++++
T Consensus 76 Es~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~--~~----~~-~~~~f~~~~-~~----~~~~~~~E~~~~~W~~~~ 143 (171)
T 1q27_A 76 ETYEEAFRREAREELNVEIDALSWRPLASFSPFQT--TL----SS-FMCVYELRS-DA----TPIFNPNDISGGEWLTPE 143 (171)
T ss_dssp SCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSS--CC----SS-EEEEEEEEC-CC----CCCSCTTTCSCCEEECHH
T ss_pred CCHHHHHHHHHHHHHCCcccccceEEEEEEeccCC--CC----cc-EEEEEEEEE-CC----ccccCchhhheEEEecHH
Confidence 9999999999999999998766677777664 322 11 12 667787765 22 235667899999999999
Q ss_pred HHHhHHhc
Q 004012 159 EYKNLLAK 166 (779)
Q Consensus 159 El~~~l~~ 166 (779)
++.+++..
T Consensus 144 el~~~~~~ 151 (171)
T 1q27_A 144 HLLARIAA 151 (171)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99876653
No 9
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.66 E-value=2e-15 Score=145.29 Aligned_cols=127 Identities=20% Similarity=0.363 Sum_probs=96.6
Q ss_pred ccccCCceeEEEEEEEEecCCCEEEEEEeCCC--CCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEE
Q 004012 29 EVHRVGDYHRTVNAWIFAESTQELLLQRRADF--KDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 106 (779)
Q Consensus 29 ~~h~~g~~hr~v~v~V~~~~~gkVLL~rRs~~--k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l 106 (779)
..+.....|+++.++|++ .+++|||++|... +..++|.|++| ||++++|||+.+||+||++||||+.+. .+..+
T Consensus 5 ~~~~~~~~~~~~~~vi~~-~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~--~~~~l 80 (159)
T 1sjy_A 5 ERTHVPVELRAAGVVLLN-ERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGENPQDAAVREACEETGLRVR--PVKFL 80 (159)
T ss_dssp CCCCCCCCEEEEEEEEBC-TTCCEEEEEESCC----CCCCCEECS-EEECCTTSCHHHHHHHHHHHHHSCCEE--EEEEE
T ss_pred ccCCCCeEEEeEEEEEEe-CCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHHCccce--eeEEE
Confidence 445667789999999987 4789999999852 45678999999 999999999999999999999999964 34555
Q ss_pred EEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccC-CccceeeEEEeCHHHHHhHHhcC
Q 004012 107 FTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 107 ~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~-~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
+.+... .+++ .+...++|.+....+. .+.+ +++|+.++.|++++++.+++..+
T Consensus 81 ~~~~~~--~~~~---~~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 81 GAYLGR--FPDG---VLILRHVWLAEPEPGQ---TLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp EEEEEE--CTTS---CEEEEEEEEEEECSSC---CCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred EEEecc--cCCC---ceEEEEEEEEEccCCC---ccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 555432 2232 3457788888774432 1344 67899999999999999988753
No 10
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.66 E-value=5.5e-16 Score=146.62 Aligned_cols=110 Identities=21% Similarity=0.289 Sum_probs=80.3
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
|.+++++|++ +|+|||+||.. |.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.....
T Consensus 4 ~~aag~vv~~--~~~vLL~~r~~------g~W~~P-gG~ve~gEt~~~aa~RE~~EEtGl~~~~--~~~l~~~~~~~~~~ 72 (134)
T 3i7u_A 4 EFSAGGVLFK--DGEVLLIKTPS------NVWSFP-KGNIEPGEKPEETAVREVWEETGVKGEI--LDYIGEIHYWYTLK 72 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEECTT------SCEECC-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEET
T ss_pred EEEEEEEEEE--CCEEEEEEeCC------CcEECC-eeEecCCCCHHHHHHHHHHHhcCceEEE--eeeeeeeeEEecCC
Confidence 5678888887 68999998753 789999 9999999999999999999999999753 44555444333222
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
+. ..+..+++|.+...+.. +.++ +|+.+++|++++++.+++
T Consensus 73 ~~--~~~~~~~~f~~~~~~~~----~~~~-~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 73 GE--RIFKTVKYYLMKYKEGE----PRPS-WEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp TE--EEEEEEEEEEEEEEEEC----CCCC-TTSSEEEEEEHHHHHHHB
T ss_pred Cc--eEEEEEEEEEEEEcCCc----CcCC-hhheEEEEEEHHHHhhhc
Confidence 21 12334566767654432 2333 699999999999998764
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.63 E-value=4.8e-15 Score=142.34 Aligned_cols=114 Identities=22% Similarity=0.267 Sum_probs=87.1
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecc
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~ 114 (779)
..|.+|.++|++ .+++|||++|+..+..++|.|.+| ||++++|||+.+||+||++||||+.+....+ ++.+.+..
T Consensus 6 ~~~~~v~~vi~~-~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~--~~~~~~~~- 80 (153)
T 3grn_A 6 PYIISVYALIRN-EKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDESLKEGVAREVWEETGITMVPGDI--AGQVNFEL- 80 (153)
T ss_dssp CEEEEEEEEEEC-TTCCEEEEEECTTCSSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCCCCCCSE--EEEEEEEC-
T ss_pred ceEEEEEEEEEc-CCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCCHHHHHHhhhhhhhCcEeecceE--EEEEEEec-
Confidence 467888898887 478999999998767889999999 9999999999999999999999999765443 44443321
Q ss_pred cCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 115 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 115 ~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+. .+....+|.+....+. +.+ .+|+.+++|++++++.++
T Consensus 81 -~~----~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 81 -TE----KKVIAIVFDGGYVVAD----VKL-SYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp -SS----CEEEEEEEEEEECCCC----CCC-CTTEEEEEEECHHHHTTC
T ss_pred -CC----ceEEEEEEEEEecCCc----Eec-CCCcceEEEEEHHHhhhc
Confidence 11 2446677777654432 223 379999999999999653
No 12
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.61 E-value=5.8e-15 Score=143.58 Aligned_cols=125 Identities=20% Similarity=0.235 Sum_probs=79.2
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEE-
Q 004012 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFL- 110 (779)
Q Consensus 32 ~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~- 110 (779)
..+..|+++.+++++ .+++|||+||+..+..++|.|.+| ||++++|||+.+||+||++||||+.+....+..+....
T Consensus 22 ~~~~~~~~~~~~ii~-~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 99 (165)
T 3oga_A 22 SNAMRQRTIVCPLIQ-NDGCYLLCKMADNRGVFPGQWALS-GGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDD 99 (165)
T ss_dssp --CCEEEEEEEEEEE-ETTEEEEEEECC------CCEECC-CEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEE
T ss_pred CCCcceEEEEEEEEe-CCCEEEEEEecCCCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecc
Confidence 456678888888887 478999999998777899999999 99999999999999999999999997543333221100
Q ss_pred -eecccCCCcccc-eEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 111 -QQNVINDGKFIN-NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 111 -~~~~~~~g~~~~-~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
....++++.... ..+..+|.+...... +.. ++|+.+++|++++++.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 100 IRIKTYADGRQEEIYMIYLIFDCVSANRD----ICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEEC--CCEEEEEEEEEEEEEEESCCC----CCC-CTTEEEEEEECGGGGGGS
T ss_pred eeeEecCCCCceeEEEEEEEEEeeccCCC----ccC-CchheeeEEccHHHHhhC
Confidence 011122222111 112344444443221 222 379999999999999663
No 13
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.60 E-value=6.9e-15 Score=139.17 Aligned_cols=114 Identities=17% Similarity=0.283 Sum_probs=86.5
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecc
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~ 114 (779)
..+.++.+++++ .+++|||+||... ..++|.|.+| ||++++||++.+||+||++||||+.+....+..++.+.+..
T Consensus 6 ~~~~~~~~vi~~-~~~~vLl~~r~~~-~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~- 81 (144)
T 3r03_A 6 PILLVTAAALID-PDGRVLLAQRPPG-KSLAGLWEFP-GGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSY- 81 (144)
T ss_dssp CEEEEEEEEEBC-TTSCEEEEECCTT-SSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC-
T ss_pred ceeEEEEEEEEc-CCCEEEEEEeCCC-CCCCCcEECC-CcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccC-
Confidence 457777888877 4789999999865 4589999999 99999999999999999999999998665555655444322
Q ss_pred cCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 115 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 115 ~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
. ..+...++|.+..... .+...|+.+++|++++++.++
T Consensus 82 -~----~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 82 -D----TFHLLMPLYACRSWRG------RATAREGQTLAWVRAERLREY 119 (144)
T ss_dssp -S----SSEEEEEEEEECCCBS------CCCCCSSCEEEEECGGGGGGS
T ss_pred -C----CeEEEEEEEEEEecCC------ccCCCCcceEEEEeHHHhccC
Confidence 1 1244567776654332 334578899999999999664
No 14
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.60 E-value=4.9e-16 Score=149.66 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=84.2
Q ss_pred ccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEE
Q 004012 27 RSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV 106 (779)
Q Consensus 27 R~~~h~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l 106 (779)
|..++.....|.++.+++++ .+++|||++|+ +|.|.+| ||++++|||+.+||+||++||||+.+.. +..+
T Consensus 11 r~~~~~~~~~~~~v~~ii~~-~~~~vLL~~r~------~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~ 80 (153)
T 3eds_A 11 REQLGHELIFXPSVAAVIKN-EQGEILFQYPG------GEYWSLP-AGAIELGETPEEAVVREVWEETGLKVQV--KKQK 80 (153)
T ss_dssp HHHHTTSCEEEEEEEEEEBC-TTCCEEEECC---------CBBCS-EEECCTTSCHHHHHHHHHHHHHCEEEEE--EEEE
T ss_pred HHhcCCCcEEeeeEEEEEEc-CCCeEEEEEcC------CCcEECC-ccccCCCCCHHHHHHHHHHHHHCcccee--eeEE
Confidence 56666778899999999988 57899999886 6899999 9999999999999999999999999643 4444
Q ss_pred EEEEe---ecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004012 107 FTFLQ---QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 107 ~~~~~---~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
+.+.. ...++++. ..+.+..+|.+....+. +.++++|+.+++|++++++.++..
T Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~----~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 81 GVFGGKEYRYTYSNGD-EVEYIVVVFECEVTSGE----LRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EEECSGGGEEECTTSC-EEEEEEEEEEEEEEEEC----CC-------CEEEECGGGCCCBSS
T ss_pred EEecccceeeecCCCC-eEEEEEEEEEEEecCCc----cccCCCcEEEEEEECHHHCchhcc
Confidence 44411 11122331 22346677877764432 355668999999999999976543
No 15
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.59 E-value=1.2e-14 Score=139.90 Aligned_cols=119 Identities=17% Similarity=0.234 Sum_probs=87.1
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
..++++++++ .+++|||+||+.. .++|.|.+| ||++++|||+.+||+||++||||+.+....+..++.+.+.....
T Consensus 18 ~~~v~~vi~~-~~~~vLl~~r~~~--~~~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 93 (160)
T 1rya_A 18 LVSLDFIVEN-SRGEFLLGKRTNR--PAQGYWFVP-GGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDN 93 (160)
T ss_dssp EEEEEEEEEC-TTSCEEEEEECSS--SSTTSEECC-EEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSB
T ss_pred EEEEEEEEEc-CCCEEEEEeccCC--CCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEccc
Confidence 4578888887 5789999999863 368999999 99999999999999999999999996434456666554332111
Q ss_pred -CC-cccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 117 -DG-KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 117 -~g-~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
.| ....+.+.++|.+..... .+..+++|+.+++|++++++.++
T Consensus 94 ~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 94 FSGTDFTTHYVVLGFRFRVSEE----ELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp TTBSSSCEEEEEEEEEEECCGG----GCCCCSSSEEEEEEECHHHHHHC
T ss_pred ccCCCcCcEEEEEEEEEEcCcc----ccccCCCccceEEEecHHHHhhc
Confidence 11 112255677787765332 23556689999999999999764
No 16
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.58 E-value=1.8e-14 Score=138.99 Aligned_cols=116 Identities=23% Similarity=0.261 Sum_probs=77.7
Q ss_pred EEEEEEEEe--------cCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEE
Q 004012 38 RTVNAWIFA--------ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 109 (779)
Q Consensus 38 r~v~v~V~~--------~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~ 109 (779)
++++++|+. .++.++||+||+.. +|.|.+| ||++++|||+.+||+||++||||+.+.. ...+..+
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt~~~aa~REl~EEtGl~~~~--~~~~~~~ 76 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPP-KGHVEPGEDDLETALRETQEEAGIEAGQ--LTIIEGF 76 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECS-EEECCSSCCHHHHHHHHHHHHHCCCGGG--EEEEEEE
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECC-eeeccCCCCHHHHHHHHHHHHHCCcccc--ceeeeeE
Confidence 356666663 24568999999764 5889999 9999999999999999999999999754 3333333
Q ss_pred EeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004012 110 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 110 ~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
......... .......+|++....... .....+|+.+++|++++|+.+++.
T Consensus 77 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 77 KRELNYVAR--NKPKTVIYWLAEVKDYDV---EIRLSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp EEEEEEEET--TEEEEEEEEEEEESCTTC---CCCCCTTEEEEEEECHHHHHHHHC
T ss_pred eeeeecCCC--cceeEEEEEEEEEeccCC---ccCCCcceeEEEEeEHHHHHHHcC
Confidence 222111111 122344555555543221 122346999999999999988653
No 17
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.58 E-value=3.8e-14 Score=133.09 Aligned_cols=114 Identities=20% Similarity=0.258 Sum_probs=82.1
Q ss_pred eeEEEEEEEEecC--CCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCe--EEEEEEEe
Q 004012 36 YHRTVNAWIFAES--TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF--EFVFTFLQ 111 (779)
Q Consensus 36 ~hr~v~v~V~~~~--~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l--~~l~~~~~ 111 (779)
.++++++++++.. +++|||+||+. .+|.|.+| ||++++|||+.+||+||++||||+.+....+ ..++.+.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 76 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFY 76 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEE
Confidence 3567888888732 35899999873 36899999 9999999999999999999999997543222 12223333
Q ss_pred ecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 112 ~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
.. + + .+...++|.+...... ...+++|+.++.|++++++.+++
T Consensus 77 ~~--~-~---~~~~~~~f~~~~~~~~----~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 77 EA--K-G---KPKSVKYWLAKLNNPD----DVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp EE--T-T---EEEEEEEEEEEECSCC----CCCCCTTEEEEEEECHHHHHHHH
T ss_pred Ee--C-C---CceEEEEEEEEecCCc----ccCCCchhcEeEeccHHHHHHhh
Confidence 22 1 1 2456777888765421 24556899999999999998864
No 18
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.57 E-value=2.9e-14 Score=136.57 Aligned_cols=108 Identities=21% Similarity=0.324 Sum_probs=80.9
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
|.++.+++.+ +++|||+||.. ..+|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+.. +
T Consensus 5 ~~~v~~ii~~--~~~vLl~~r~~---~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~~--~ 74 (153)
T 3shd_A 5 HVTVACVVHA--EGKFLVVEETI---NGKALWNQP-AGHLEADETLVEAAARELWEETGISAQP--QHFIRMHQWIA--P 74 (153)
T ss_dssp EEEEEEEEEE--TTEEEEEEEEE---TTEEEEECS-EEECCTTCCHHHHHHHHHHHHHCCCCCC--CEEEEEEEECC--T
T ss_pred ceEEEEEEEe--CCEEEEEEecC---CCCCCEECC-eEEeCCCCCHHHHHHHHHHHHHCccccc--CcEEEEEEEec--C
Confidence 4556666655 68999999872 347899999 9999999999999999999999999765 34455444332 1
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl 160 (779)
++ .+.+.++|.+....... ..++++|+.+++|++++++
T Consensus 75 ~~---~~~~~~~f~~~~~~~~~---~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 75 DK---TPFLRFLFAIELEQICP---TQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp TS---CCEEEEEEEEECSSCCC---CCCCSTTCCEEEEECHHHH
T ss_pred CC---ceEEEEEEEEEccccCc---CCCCcccceeeEEecHHHh
Confidence 22 34566778887654321 3566789999999999999
No 19
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.57 E-value=1.8e-14 Score=136.19 Aligned_cols=109 Identities=21% Similarity=0.200 Sum_probs=76.9
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCC-CCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDS-WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~-~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
.++.++|++ +++|||+||+..+.. ++|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.. +
T Consensus 7 ~~v~~vi~~--~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EE~Gl~~~~--~~~~~~~~~~~--~ 79 (140)
T 3gwy_A 7 EVVAAVIRL--GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGESLQEALQREIMEEMDYVIEV--GEKLLTVHHTY--P 79 (140)
T ss_dssp EEEEEEEEE--TTEEEEEEC---------CCEECS-EEECCTTCCHHHHHHHHHHHHHCCCEEE--EEEEEEEECCC--S
T ss_pred EEEEEEEEe--CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCCHHHHHHHHHHHhhCcEEEe--ceEEEEEEEEe--C
Confidence 355666666 689999999876432 78999999 9999999999999999999999998643 44555544322 2
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+ .+...++|.+..... .++.+|+.+++|++++++.++
T Consensus 80 ~----~~~~~~~f~~~~~~~------~~~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 80 D----FEITMHAFLCHPVGQ------RYVLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp S----CCEEEEEEEEEECCS------CCCCCSSCEEEEECHHHHTTS
T ss_pred C----ceEEEEEEEEEecCC------cccccccceeEeccHHHHhhC
Confidence 1 245677888876543 234468999999999999653
No 20
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.57 E-value=1.6e-14 Score=139.32 Aligned_cols=115 Identities=20% Similarity=0.337 Sum_probs=86.1
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 34 g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
...++++.+++++ .+++|||+||... ..++|.|.+| ||++++||++.+||+||+.||||+.+....+..++.+.+..
T Consensus 26 ~~~~~~~~~~i~~-~~~~vLL~~r~~~-~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 102 (158)
T 3hhj_A 26 SSLLIVVACALLD-QDNRVLLTQRPEG-KSLAGLWEFP-GGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGY 102 (158)
T ss_dssp -CEEEEEEEEEBC-TTSEEEEEECCCT-TSCCCCCBCC-EEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC
T ss_pred CceEEEEEEEEEe-CCCEEEEEEeCCC-CCCCCEEECC-ceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeecc
Confidence 3457777787877 5789999999865 4589999999 99999999999999999999999998665555555544322
Q ss_pred ccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
.. .+...++|.+..... .+...|+.+++|++++++.++
T Consensus 103 --~~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 103 --ET----FHLLMPLYFCSHYKG------VAQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp --SS----CEEEEEEEEESCCBS------CCCCTTSCEEEEEEGGGGGGS
T ss_pred --CC----cEEEEEEEEEEECCC------ccCCccccceEEEcHHHHhhC
Confidence 11 244556666654322 344578899999999999654
No 21
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.56 E-value=2.5e-14 Score=135.76 Aligned_cols=115 Identities=19% Similarity=0.315 Sum_probs=82.8
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEE---Eee-
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF---LQQ- 112 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~---~~~- 112 (779)
+.++++++++..++++||++|+.. ||.|++| ||++++|||+.+||+||++||||+.+....+..++.. .+.
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 83 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEI 83 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEEC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeee
Confidence 457888888843589999998763 7999999 9999999999999999999999999754323333322 110
Q ss_pred -----cccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 113 -----NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 113 -----~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
..++++ ..+...++|.+....+. ....+|+.+++|++++++.++
T Consensus 84 ~~~~~~~~~~~--~~~~~~~~f~~~~~~~~-----~~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 84 FSHLRHRYAPG--VTRNTESWFCLALPHER-----QIVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp CGGGGGGBCTT--CCEEEEEEEEEEESSCC-----CCCCSSSSCEEEEEHHHHHHH
T ss_pred ecccccccCCC--CcceEEEEEEEEcCCCC-----CcChhHhhccEeecHHHHHhh
Confidence 112222 23456788888775432 223378999999999999875
No 22
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.56 E-value=2.4e-14 Score=133.56 Aligned_cols=110 Identities=22% Similarity=0.301 Sum_probs=80.7
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
..+++++|++ +++|||+||.. |.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+....+
T Consensus 4 ~~~~~~vi~~--~~~vLl~~r~~------~~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~~~~ 72 (134)
T 2pbt_A 4 EFSAGGVLFK--DGEVLLIKTPS------NVWSFP-KGNIEPGEKPEETAVREVWEETGVKGEI--LDYIGEIHYWYTLK 72 (134)
T ss_dssp EEEEEEEEEE--TTEEEEEECTT------SCEECC-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEET
T ss_pred ceEEEEEEEE--CCEEEEEEeCC------CcEECC-ccccCCCCCHHHHHHHHHHHHHCCccEE--eeeeeEEEEEeeCC
Confidence 3567777887 57999999864 899999 9999999999999999999999999643 44555543332222
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
| ...+...++|.+...... ..+++ |+.+++|++++++.+++
T Consensus 73 -~-~~~~~~~~~~~~~~~~~~----~~~~~-e~~~~~W~~~~el~~~~ 113 (134)
T 2pbt_A 73 -G-ERIFKTVKYYLMKYKEGE----PRPSW-EVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp -T-EEEEEEEEEEEEEEEEEC----CCCCT-TSSEEEEEEHHHHHHHC
T ss_pred -C-cEEEEEEEEEEEEecCCC----cCCCc-ceeEEEEEcHHHHHhhh
Confidence 2 123456677777764432 23343 99999999999998753
No 23
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.55 E-value=5.9e-14 Score=141.07 Aligned_cols=125 Identities=22% Similarity=0.311 Sum_probs=80.6
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCc-cCC--CCeEEEEE
Q 004012 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGIN-LPK--DAFEFVFT 108 (779)
Q Consensus 32 ~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~-v~~--~~l~~l~~ 108 (779)
.....|.+++++|+++++++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+. +.. ..+..+..
T Consensus 40 ~~~~~h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~ 113 (197)
T 3fcm_A 40 DNTIAHLTSSAFAVNKERNKFLMIHHNI-----YNSWAWT-GGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDV 113 (197)
T ss_dssp TCSSEEEEEEEEEECTTSCEEEEEEETT-----TTEEECE-EEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEE
T ss_pred cCCCccEEEEEEEEECCCCEEEEEEecC-----CCCEECC-ccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEE
Confidence 3457899999999985445999999863 5899999 9999999999999999999999998 321 11112222
Q ss_pred EEeecccCCCccc--ceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004012 109 FLQQNVINDGKFI--NNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 109 ~~~~~~~~~g~~~--~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
+........|... ...+..+|.+....+ ..+.++++|+.+++|++++++.+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~ 169 (197)
T 3fcm_A 114 LTVNGHIKRGKYVSSHLHLNLTYLIECSED---ETLMLKEDENSGVMWIPFNEISKYCS 169 (197)
T ss_dssp EEECCEEETTEEECCEEEEEEEEEEECCTT---SCCCCCC----CEEEEEGGGHHHHCC
T ss_pred eeecCccccCcccCCceeEEEEEEEEeCCC---cccCCCcccccceEEccHHHHHhhcC
Confidence 2211111111100 011335565554332 22466778999999999999988754
No 24
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.55 E-value=2.5e-14 Score=138.33 Aligned_cols=115 Identities=20% Similarity=0.292 Sum_probs=85.2
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 34 g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
...+.+|.++|++ +++|||+||.... ++|.|.+| ||++++|||+.+||+||++||||+.+... ..++.+....
T Consensus 26 ~~~~~~v~~vi~~--~~~vLL~~r~~~~--~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~ 98 (157)
T 4dyw_A 26 EQPRVGCGAAIVR--DGRILLIKRKRAP--EAGCWGLP-GGKVDWLEPVERAVCREIEEELGIALERA--TLLCVVDHID 98 (157)
T ss_dssp CCCEEEEEEEEEE--TTEEEEEEECSSS--STTCEECC-EEECCTTCCHHHHHHHHHHHHHSCEEESC--EEEEEEEEEE
T ss_pred CCceeEEEEEEEE--CCEEEEEEecCCC--CCCEEECC-cccCCCCCCHHHHHHHHHHHHHCcccccC--cEEEEEEeec
Confidence 3467788888888 6899999998643 78999999 99999999999999999999999997543 4444443322
Q ss_pred ccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
. .. ..+.+..+|.+....... ...+++|+.+++|++++++.+
T Consensus 99 ~--~~--~~~~~~~~f~~~~~~~~~---~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 99 A--AN--GEHWVAPVYLAHAFSGEP---RVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp T--TT--TEEEEEEEEEESEEESCC---CCSCTTTEEEEEEEETTSCCS
T ss_pred c--CC--CcEEEEEEEEEEEcCCCc---ccCCCCcEeEEEEECHHHccc
Confidence 1 11 134466777776543322 233558999999999999954
No 25
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.54 E-value=2e-14 Score=139.65 Aligned_cols=116 Identities=16% Similarity=0.252 Sum_probs=84.5
Q ss_pred CCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEee
Q 004012 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 112 (779)
Q Consensus 33 ~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~ 112 (779)
....|.++.++|++..+++|||+||+. ..|+|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.+.
T Consensus 6 ~~~~~~~v~~vi~~~~~~~vLL~~r~~--~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~~ 80 (161)
T 3exq_A 6 TQPVELVTMVMVTDPETQRVLVEDKVN--VPWKAGHSFP-GGHVEVGEPCATAAIREVFEETGLRLSG--VTFCGTCEWF 80 (161)
T ss_dssp CCCEEEEEEEEEBCTTTCCEEEECCCC--CTTTCSBBCC-CCBCCTTSCHHHHHHHHHHHHHCCEESC--CEEEEEEEEE
T ss_pred cCCceEEEEEEEEeCCCCEEEEEEccC--CCCCCCEEcc-ceecCCCCCHHHHHHHHHHHhhCcEecC--CcEEEEEecc
Confidence 345678888888874336999999883 4688899999 9999999999999999999999999754 4555555443
Q ss_pred cccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 113 ~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
... . ..+....+|.+..... .+...|..+++|++++++.++
T Consensus 81 ~~~--~--~~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 81 DDD--R--QHRKLGLLYRASNFTG------TLKASAEGQLSWLPITALTRE 121 (161)
T ss_dssp CSS--C--SSEEEEEEEEECCEES------CCCGGGTTTEEEECGGGCCTT
T ss_pred cCC--C--CeEEEEEEEEEeccCC------ccCCCccceEEEeeHHHhhhC
Confidence 211 1 1244566666654322 234568889999999999553
No 26
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.54 E-value=3.6e-14 Score=135.25 Aligned_cols=110 Identities=22% Similarity=0.317 Sum_probs=80.4
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
++.+.++|++ .+++|||++|... ..++|.|.+| ||++++|||+.+||+||+.||||+.+....+ ++.+.+.. +
T Consensus 21 ~~~~~~~i~~-~~~~vLl~~r~~~-~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~--~~~~~~~~--~ 93 (153)
T 3ees_A 21 WIPVVAGFLR-KDGKILVGQRPEN-NSLAGQWEFP-GGKIENGETPEEALARELNEELGIEAEVGEL--KLACTHSY--G 93 (153)
T ss_dssp EEEEEEEEEE-ETTEEEEEECCTT-STTTTCEECS-EEECCTTCCHHHHHHHHHHHHHSCEEECCCE--EEEEEEEE--T
T ss_pred eEEEEEEEEE-ECCEEEEEEeCCC-CCCCCeEECC-ceeeCCCCCHHHHHHHHHHHHHCCccccCce--EEEEEEec--C
Confidence 5556666666 3689999999865 4689999999 9999999999999999999999999765443 33333221 1
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+ .+...++|.+..... .++.+|+.++.|++++++.++
T Consensus 94 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 94 D----VGILILFYEILYWKG------EPRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp T----EEEEEEEEEECEEES------CCCCSSSSEEEEECGGGGGGS
T ss_pred C----CeEEEEEEEEEECCC------CcCCCccceEEEecHHHhhhC
Confidence 1 223456676655332 344578899999999999653
No 27
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.54 E-value=1.2e-14 Score=139.86 Aligned_cols=116 Identities=19% Similarity=0.221 Sum_probs=84.0
Q ss_pred CCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEee
Q 004012 33 VGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ 112 (779)
Q Consensus 33 ~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~ 112 (779)
....++++.+++++ .+++|||+||... .++|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+..
T Consensus 16 ~~~~~~~v~~~i~~-~~~~vLl~~r~~~--~~~~~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~--~~~~~~~~~- 88 (156)
T 3gg6_A 16 RKNVCYVVLAVFLS-EQDEVLLIQEAKR--ECRGSWYLP-AGRMEPGETIVEALQREVKEEAGLHCEP--ETLLSVEER- 88 (156)
T ss_dssp CTTCEEEEEEECBC-TTSEEEEEECCCT--TSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCEEEEE--EEEEEEEES-
T ss_pred CCceEEEEEEEEEe-CCCEEEEEEecCC--CCCCEEECC-eeeccCCCCHHHHHHHHHHHhhCceeEe--eeEEEEEcC-
Confidence 34456677777777 5789999999854 378999999 9999999999999999999999998643 444444431
Q ss_pred cccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 113 ~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
. .+.+.++|.+....... .....+++|+.+++|++++++.+.+
T Consensus 89 ---~-----~~~~~~~f~~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~ 131 (156)
T 3gg6_A 89 ---G-----PSWVRFVFLARPTGGIL-KTSKEADAESLQAAWYPRTSLPTPL 131 (156)
T ss_dssp ---S-----TTEEEEEEEEEEEEECC-CCGGGCSSSCSEEEEEETTSCCSSB
T ss_pred ---C-----CCEEEEEEEEEeeCCee-ccCCCCCcceeeeEEEcHHHCcccc
Confidence 1 12356677777643321 1112355799999999999996543
No 28
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.53 E-value=1.3e-13 Score=127.27 Aligned_cols=106 Identities=22% Similarity=0.275 Sum_probs=78.9
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.++++++++ .+++|||+||+. |.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.+.. .
T Consensus 3 ~~~~~vi~~-~~~~vLl~~r~~------g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~---~ 69 (126)
T 1vcd_A 3 LGAGGVVFN-AKREVLLLRDRM------GFWVFP-KGHPEPGESLEEAAVREVWEETGVRAEV--LLPLYPTRYVN---P 69 (126)
T ss_dssp EEEEEEEEC-TTSCEEEEECTT------SCEECC-EECCCTTCCHHHHHHHHHHHHHCCEEEE--EEEEEEEEEEC---T
T ss_pred eEEEEEEEc-CCCEEEEEEECC------CCccCC-cCcCCCCCCHHHHHHHHHHHhhCcEeee--ccEEeEEEEec---C
Confidence 467788887 467999999864 789999 9999999999999999999999999643 44555554432 1
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
+ .+....+|.+....+. ...++|+.+++|++++++.+.+
T Consensus 70 ~---~~~~~~~~~~~~~~~~-----~~~~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 70 K---GVEREVHWFLMRGEGA-----PRLEEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp T---SCEEEEEEEEEEEESC-----CCCCTTCCEEEEECHHHHHHHB
T ss_pred C---ceEEEEEEEEEEcCCC-----CCCCcceeeeEEcCHHHHHHhh
Confidence 1 1334566766554321 2345789999999999998753
No 29
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.52 E-value=1.2e-14 Score=147.69 Aligned_cols=130 Identities=16% Similarity=0.300 Sum_probs=88.2
Q ss_pred cccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCCC--CCCCCeec-cccccCCCCCC--H----HHHHHHHHHH
Q 004012 22 GITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFKD--SWPGMWDI-SSAGHISAGDS--S----LISAQRELQE 92 (779)
Q Consensus 22 G~~~~R~~~h~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~--~~pG~W~~-PvGG~ve~GEt--~----~eAAlREl~E 92 (779)
|..++|..+...+.++..+..+|+. .+|++||++|...+. .++|.|++ | |||+++||| + .+||+||++|
T Consensus 52 ~~~~~Rg~~e~d~~~~q~i~~~II~-~~grvLl~~R~~~~~e~~~~g~w~~gP-GGhVE~GEs~~p~EtleeAa~REl~E 129 (211)
T 3e57_A 52 GFFRERDEAEYDETTKQVIPYVVIM-DGDRVLITKRTTKQSEKRLHNLYSLGI-GGHVREGDGATPREAFLKGLEREVNE 129 (211)
T ss_dssp CEEEEHHHHTTCTTEEEEEEEEEEE-ETTEEEEEEC------------CBSSE-ECCCBGGGCSSHHHHHHHHHHHHHHH
T ss_pred CEEEEccccccCCcccceEEEEEEE-ECCEEEEEEECCCCCcccccCCccccc-ceEEeCCCCCCchhhHHHHHHHHHHH
Confidence 3356788888888888777766766 378999999987653 36799999 7 999999999 5 9999999999
Q ss_pred HhCCccCCCCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHh
Q 004012 93 ELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 93 EtGl~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
|||+.+. .+..++.+.+... +.+ ...+..+|.+..... .+.++|+.+++|+++++|.++..
T Consensus 130 EtGl~v~--~~~~ig~~~~~~~-~~~---~~~l~~~f~~~~~~g------~~~~~E~~~~~W~~~~eL~~~~~ 190 (211)
T 3e57_A 130 EVDVSLR--ELEFLGLINSSTT-EVS---RVHLGALFLGRGKFF------SVKEKDLFEWELIKLEELEKFSG 190 (211)
T ss_dssp HEEEEEE--EEEEEEEEECCSS-HHH---HTEEEEEEEEEEEEE------EESCTTTCEEEEEEHHHHHHHGG
T ss_pred HhCCeee--ccEEEEEEeccCC-CCC---eEEEEEEEEEEeCCc------eeCCCCeEEEEEEEHHHHHHhHh
Confidence 9999864 3566666544211 111 123445677765422 44567888999999999988643
No 30
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.52 E-value=7.8e-14 Score=133.25 Aligned_cols=112 Identities=17% Similarity=0.127 Sum_probs=80.6
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.++.+++.+ +++|||+||.... . +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+.. ++
T Consensus 9 ~~v~~ii~~--~~~vLl~~r~~~~-~-~~~w~lP-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~--~~ 79 (153)
T 2b0v_A 9 VTVAAVIEQ--DDKYLLVEEIPRG-T-AIKLNQP-AGHLEPGESIIQACSREVLEETGHSFLP--EVLTGIYHWTC--AS 79 (153)
T ss_dssp EEEEEECEE--TTEEEEEEECSSS-S-CCEEECS-EEECCTTSCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEE--TT
T ss_pred EEEEEEEee--CCEEEEEEEcCCC-C-CCeEECC-CcCcCCCCCHHHHHHHHHHHhhCcEecc--ceEEEEEEEeC--CC
Confidence 345555544 6899999998653 3 7999999 9999999999999999999999999753 44455544332 11
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
. ..+.+.++|.+....... ....++|+.++.|++++++.++
T Consensus 80 ~--~~~~~~~~f~~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 80 N--GTTYLRFTFSGQVVSFDP---DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp T--TEEEEEEEEEEEEEEECT---TSCCCTTEEEEEEEEHHHHHHT
T ss_pred C--CcEEEEEEEEEEeCCCCC---CCCCCCCeeeEEEecHHHHhhh
Confidence 1 123456677777643321 2345679999999999999875
No 31
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.52 E-value=2.3e-13 Score=129.78 Aligned_cols=115 Identities=20% Similarity=0.233 Sum_probs=77.2
Q ss_pred EEEEEEE--ecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec-cc
Q 004012 39 TVNAWIF--AESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN-VI 115 (779)
Q Consensus 39 ~v~v~V~--~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~-~~ 115 (779)
+|.++++ +..+++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+....+.......... ..
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 80 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHF 80 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGT
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceee
Confidence 4555554 22457899999976 3999999 99999999999999999999999997653212221121111 11
Q ss_pred C-CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 116 N-DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 116 ~-~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
. .+ ..+...++|.+...... ..+.+ ++|+.+++|++++++.+++
T Consensus 81 ~~~~--~~~~~~~~f~~~~~~~~--~~~~~-~~E~~~~~W~~~~el~~~~ 125 (149)
T 3son_A 81 SFNK--PYVVPEYCFAIDLTSCS--YQVTL-SLEHSELRWVSYESAIQLL 125 (149)
T ss_dssp CSSS--CSEEEEEEEEEECTTTG--GGCCC-CTTEEEEEEECHHHHHHHC
T ss_pred ccCC--ceEeEEEEEEEEcCCCC--CcccC-CCceeeEEEeCHHHHHHHh
Confidence 1 11 12345677877765211 12344 4899999999999998764
No 32
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.51 E-value=6.7e-14 Score=137.03 Aligned_cols=113 Identities=22% Similarity=0.349 Sum_probs=80.0
Q ss_pred EEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCC
Q 004012 39 TVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118 (779)
Q Consensus 39 ~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g 118 (779)
+|.+++++ ++++||++|.... .++|.|.+| ||++++|||+.+||+||++||||+ +. .+..++.+... .+
T Consensus 36 ~v~vii~~--~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl-~~--~~~~l~~~~~~----~~ 104 (170)
T 1v8y_A 36 AVAVIALR--EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGEDPLEAARRELAEQTGL-SG--DLTYLFSYFVS----PG 104 (170)
T ss_dssp EEEEEEEE--TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCCHHHHHHHHHHHHHSE-EE--EEEEEEEEESC----TT
T ss_pred eEEEEEEE--CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCC-Cc--CceeeEEEecC----CC
Confidence 78888887 6899998876543 578999999 999999999999999999999999 53 45666655321 11
Q ss_pred cccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004012 119 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 119 ~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
..+...++|.+...... ...++++|+.++.|++++++.+++..+
T Consensus 105 --~~~~~~~~f~~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 105 --FTDEKTHVFLAENLKEV---EAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp --TBCCEEEEEEEEEEEEC---C--------CEEEEECHHHHHHHHHTT
T ss_pred --ccccEEEEEEEEecccc---CCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 12345677777654321 134567899999999999999988753
No 33
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.51 E-value=7e-14 Score=132.68 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=80.0
Q ss_pred eeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeeccc
Q 004012 36 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 115 (779)
Q Consensus 36 ~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~ 115 (779)
.|.++.++|++..+++|||+||+ +|.|.+| ||++++|||+.+||+||+.||||+.+.. +..++.+......
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~~~ 87 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTETKEEAIHREVLEELGISVEI--GCYLGEADEYFYS 87 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEEEEEE
T ss_pred eeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCCHHHHHHHHHHHHhCCeeEe--eeEEEEEEEEEcC
Confidence 45678888887436899999973 3899999 9999999999999999999999999643 3444443211111
Q ss_pred CCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 116 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 116 ~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
..+....+...++|.+...... ....+|+.++.|++++++.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 131 (148)
T 2azw_A 88 NHRQTAYYNPGYFYVANTWRQL-----SEPLERTNTLHWVAPEEAVRLL 131 (148)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEC-----SSCC-CCSEEEEECHHHHHHHB
T ss_pred CCCCcceEEEEEEEEEEcCcCC-----cCCCCceeeEEEeeHHHHHhhh
Confidence 1121123445677777664321 2234688899999999998764
No 34
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.51 E-value=4e-14 Score=136.66 Aligned_cols=123 Identities=18% Similarity=0.316 Sum_probs=84.0
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEe
Q 004012 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (779)
Q Consensus 32 ~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~ 111 (779)
..+.+|.++++++++ .+++|||+||.. +||.|++| ||++++|||+.+||+||++||||+.+. .+........
T Consensus 9 ~~~~~~~~v~~~i~~-~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~--~~~~~~~~~~ 80 (165)
T 1f3y_A 9 PPEGYRRNVGICLMN-NDKKIFAASRLD----IPDAWQMP-QGGIDEGEDPRNAAIRELREETGVTSA--EVIAEVPYWL 80 (165)
T ss_dssp CCSSCCCEEEEEEEC-TTSCEEEEEETT----EEEEEECC-EEECCTTCCHHHHHHHHHHHHHCCCSE--EEEEECSSCC
T ss_pred CccceeeeEEEEEEC-CCCcEEEEecCC----CCCcEECC-eeccCCCCCHHHHHHHHHHHhhCCChh--hhhcccccce
Confidence 357789999999998 578999999973 46999999 999999999999999999999999853 2222111001
Q ss_pred ecccC-----------CCcccceEEEEEEEEEEcCCCCCcCccC-----CccceeeEEEeCHHHHHhHHh
Q 004012 112 QNVIN-----------DGKFINNEFADVYLVTTLNPIPLEAFTL-----QQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 112 ~~~~~-----------~g~~~~~e~~~vf~~~~~~~~~~~~i~~-----~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
...++ .+.+. ....++|.+....... .+.+ +++|+.+++|++++++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~--~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 81 TYDFPPKVREKLNIQWGSDWK-GQAQKWFLFKFTGQDQ--EINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp BCCCCHHHHHHHGGGSCSSCC-SCBEEEEEEEECSCGG--GCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred eeecCcccccccccccccccc-CceEEEEEEEecCCcc--cccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 11111 01111 1244667776643311 1233 357999999999999988653
No 35
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.51 E-value=6.4e-14 Score=131.65 Aligned_cols=110 Identities=25% Similarity=0.341 Sum_probs=79.3
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
|+.+.++|++ .+++|||++|+.. ..++|.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.+.. +
T Consensus 8 ~~~~~~~ii~-~~~~vLl~~r~~~-~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl~~~~--~~~~~~~~~~~--~ 80 (140)
T 2rrk_A 8 MIEVVAAIIE-RDGKILLAQRPAQ-SDQAGLWEFA-GGKVEPDESQRQALVRELREELGIEATV--GEYVASHQREV--S 80 (140)
T ss_dssp EEEEEEEEEE-ETTEEEEEECCSS-CSCCCCEECC-EEECCTTSCHHHHHHHHHHHHSCEEEEC--CEEEEEEEEEE--T
T ss_pred cceEEEEEEE-cCCEEEEEEcCCC-CCCCCEEECC-ceecCCCCCHHHHHHHHHHHHHCCeeec--ccEEEEEEEec--C
Confidence 5555555555 4789999999765 4579999999 9999999999999999999999999754 34455543322 1
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+ .+...++|.+..... .++..|+.++.|++++++.++
T Consensus 81 ~----~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 81 G----RIIHLHAWHVPDFHG------TLQAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp T----EEEEEEEEEESEEEE------CCCCSSCSCEEEECHHHHTTS
T ss_pred C----cEEEEEEEEEEeeCC------CcCCCccceeEEeCHHHHhhC
Confidence 1 234456676654322 233468889999999999653
No 36
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.51 E-value=4.8e-14 Score=141.06 Aligned_cols=125 Identities=17% Similarity=0.104 Sum_probs=82.1
Q ss_pred cccccccCCceeEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCe
Q 004012 26 PRSEVHRVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF 103 (779)
Q Consensus 26 ~R~~~h~~g~~hr~v~v~V~~~~~g--kVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l 103 (779)
+|...+..+..|.++.+++ + .++ +|||++|+..+..++|.|++| ||++++|||+.+||+||++||||+.+. .+
T Consensus 24 ~~~~~~~~~~~~~~~~v~i-~-~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~ 98 (194)
T 1nqz_A 24 TRTALELPHYRRAAVLVAL-T-READPRVLLTVRSSELPTHKGQIAFP-GGSLDAGETPTQAALREAQEEVALDPA--AV 98 (194)
T ss_dssp ---------CEEEEEEEEE-E-SSSSCBBCEEEEC------CCCEECS-EEECCTTCCHHHHHHHHHHHHHCCCGG--GC
T ss_pred ChhhccCCCCceEEEEEEE-e-cCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCCHHHHHHHHHHHHHCCCcc--ce
Confidence 4444455566666666665 5 356 899999987666789999999 999999999999999999999999875 35
Q ss_pred EEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcC-ccCCccceeeEEEeCHHHH-HhHH
Q 004012 104 EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEA-FTLQQTEVSAVKYIAYEEY-KNLL 164 (779)
Q Consensus 104 ~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~-i~~~~~Ev~e~~Wv~~eEl-~~~l 164 (779)
..++.+.+... . .+...++|.+....+. . ...+++|+.++.|++++++ .+..
T Consensus 99 ~~l~~~~~~~~--~----~~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 99 TLLGELDDVFT--P----VGFHVTPVLGRIAPEA---LDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EEEEECCCEEE--T----TTEEEEEEEEEECGGG---GGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEEEEccCccC--C----CCeEEEEEEEEecCCc---cccCCCccceeEEEEEEHHHhccCCC
Confidence 56665543221 1 1345677877764221 1 3456789999999999999 6643
No 37
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.50 E-value=4.4e-14 Score=136.62 Aligned_cols=114 Identities=21% Similarity=0.209 Sum_probs=80.7
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEE--------
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFV-------- 106 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l-------- 106 (779)
..|.++.++|++ +++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+.+....+..+
T Consensus 4 ~~~~~v~~vi~~--~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 75 (159)
T 3f6a_A 4 NRHFTVSVFIVC--KDKVLLHLHKK-----AKKMLPL-GGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDL 75 (159)
T ss_dssp CSCEEEEEEEEE--TTEEEEEECSS-----SCCEECE-EEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
T ss_pred cceEEEEEEEEE--CCEEEEEEcCC-----CCeEECC-ccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccc
Confidence 358899999998 68999999874 5899999 9999999999999999999999998653222110
Q ss_pred ---EEEE-----eecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 107 ---FTFL-----QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 107 ---~~~~-----~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
..+. .......+ ...+..+|.+....+. +.++++|+.+++|++++++.++
T Consensus 76 ~~~~~~~~p~~~~~~~~~~~---~~~~~~~f~~~~~~~~----~~~~~~E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 76 SGEKLLINPIHTILGDVSPN---HSHIDFVYYATTTSFE----TSPEIGESKILKWYSKEDLKNA 133 (159)
T ss_dssp TTCEEECCCSEEEEECSSSS---SCEEEEEEEEECSCSC----CCCCTTSCCCEEEECSSSSTTC
T ss_pred cccccccCccccccccCCCC---ceEEEEEEEEEeCCCC----cCCCCCcccceEEeeHHHHhhC
Confidence 0000 00000111 2245567777754432 3556789999999999999653
No 38
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.49 E-value=5.4e-14 Score=134.98 Aligned_cols=111 Identities=21% Similarity=0.269 Sum_probs=77.6
Q ss_pred CceeEEEEEEEEecCCCE----EEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEE
Q 004012 34 GDYHRTVNAWIFAESTQE----LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTF 109 (779)
Q Consensus 34 g~~hr~v~v~V~~~~~gk----VLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~ 109 (779)
...|.++.++|++ +++ ||+++|+..+ |+| |.+| ||++++|||+.+||+||++||||+.+.. +..++.+
T Consensus 5 ~~~~~~~~~ii~~--~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~ 76 (155)
T 2b06_A 5 QLTILTNICLIED--LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEAFAESVIREIYEETGLTIQN--PQLVGIK 76 (155)
T ss_dssp GCEEEEEEEEEEE--TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSCHHHHHHHHHHHHHSEEEES--CEEEEEE
T ss_pred cCcEEEEEEEEEE--CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCCHHHHHHHHHHHHhCccccC--CcEEEEE
Confidence 3467788888887 445 9999887653 788 9999 9999999999999999999999999764 3444444
Q ss_pred EeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 110 LQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 110 ~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
.+.. ..+ .+...++|.+..... .+...|+.+++|++++++.++
T Consensus 77 ~~~~--~~~---~~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 77 NWPL--DTG---GRYIVICYKATEFSG------TLQSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp EEEC--TTS---CEEEEEEEEECEEEE------CCCCBTTBEEEEEEGGGGGGS
T ss_pred eecc--CCC---ceEEEEEEEEEecCC------CCCCCcceeeEEeeHHHhhhC
Confidence 3322 112 244667776654322 223468889999999999664
No 39
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.49 E-value=1.1e-13 Score=136.78 Aligned_cols=112 Identities=19% Similarity=0.186 Sum_probs=80.8
Q ss_pred eeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeeccc
Q 004012 36 YHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVI 115 (779)
Q Consensus 36 ~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~ 115 (779)
.|+++.+++++ .+++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+. .+..++.+.+...
T Consensus 23 ~~~~~~~~vi~-~~~~vLL~~r~~~--~~~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~~~~- 95 (176)
T 3q93_A 23 ASRLYTLVLVL-QPQRVLLGMKKRG--FGAGRWNGF-GGKVQEGETIEDGARRELQEESGLTVD--ALHKVGQIVFEFV- 95 (176)
T ss_dssp CEEEEEEEEEE-CSSEEEEEEECSS--TTTTSEECE-EEECCTTSCHHHHHHHHHHHHHSCEES--CCEEEEEEEEEET-
T ss_pred CCcEEEEEEEE-eCCEEEEEEEcCC--CCCCeEECc-eecCCCCCCHHHHHHHHHHHHHCCcce--eeEEEEEEEEEcC-
Confidence 45666666666 4789999998653 478999999 999999999999999999999999975 3566666554332
Q ss_pred CCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 116 NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 116 ~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+. ..+...++|.+..... .+.+.|..+++|++++++.+.
T Consensus 96 -~~--~~~~~~~~f~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 96 -GE--PELMDVHVFCTDSIQG------TPVESDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp -TC--SCEEEEEEEEESCEES------CCCCCSSEEEEEEETTCCCGG
T ss_pred -CC--CcEEEEEEEEEECCCC------CcCCCcceeeEEeeHHHcccc
Confidence 11 1234566676653322 233456778899999999654
No 40
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.48 E-value=6.5e-14 Score=133.61 Aligned_cols=116 Identities=22% Similarity=0.202 Sum_probs=76.4
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.+|.+++++ .+++|||+++... ...++.|.+| ||++++|||+.+||+||++||||+.+. .+..++.+.. ..
T Consensus 6 ~~v~vi~~~-~~~~vLLv~~~r~-~~~~~~w~~P-gG~ve~gEt~~~aa~REl~EEtGl~~~--~~~~l~~~~~----~~ 76 (145)
T 2w4e_A 6 RAVFILPVT-AQGEAVLIRQFRY-PLRATITEIV-AGGVEKGEDLGAAAARELLEEVGGAAS--EWVPLPGFYP----QP 76 (145)
T ss_dssp EEEEEEEEE-TTSEEEEEEEEET-TTTEEEEECE-EEECCTTCCHHHHHHHHHHHHHCEECS--EEEECCCBBS----CT
T ss_pred CEEEEEEEc-CCCEEEEEEEEec-CCCCCEEEeC-CccCCCCCCHHHHHHHHHHHhhCCccC--eEEEEecCcC----CC
Confidence 467788887 4788877654322 1245799999 999999999999999999999999863 3444443211 11
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
+ ......++|.+..... ....++++|+.+++|+|++++.+++..+
T Consensus 77 ~--~~~~~~~~f~~~~~~~---~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 77 S--ISGVVFYPLLALGVTL---GAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp T--TCCCEEEEEEEEEEEE---C--------CEEEEEEEHHHHHHHHHHT
T ss_pred C--ccCceEEEEEEEeccc---CCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 2 1234566777763221 1235667899999999999999988753
No 41
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.48 E-value=1.7e-13 Score=136.79 Aligned_cols=120 Identities=21% Similarity=0.231 Sum_probs=86.5
Q ss_pred cccccccccccCCcee-----EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCC
Q 004012 22 GITKPRSEVHRVGDYH-----RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGI 96 (779)
Q Consensus 22 G~~~~R~~~h~~g~~h-----r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl 96 (779)
|....|..|..+|..+ .++.+++++ +++|||++|...+ .+|.|.+| ||++++|||+.+||+||++||||+
T Consensus 20 G~~~~~~~~~~~~~~~~~~~~~~v~~ii~~--~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 94 (189)
T 3cng_A 20 GDTLPRYICPKCHTIHYQNPKVIVGCIPEW--ENKVLLCKRAIAP--YRGKWTLP-AGFMENNETLVQGAARETLEEANA 94 (189)
T ss_dssp TCSSCEEEETTTTEEECCCCEEEEEEEEEE--TTEEEEEEESSSS--STTCEECS-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCCCcceECCCCCCccCCCCceEEEEEEEe--CCEEEEEEccCCC--CCCeEECc-eeeccCCCCHHHHHHHHHHHHHCC
Confidence 3334566777777433 467777776 6899999998643 37999999 999999999999999999999999
Q ss_pred ccCCCCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHH
Q 004012 97 NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (779)
Q Consensus 97 ~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~ 161 (779)
.+.. ...++.+.+. + .+.+.++|.+...... +. ..+|+.+++|++++++.
T Consensus 95 ~~~~--~~~~~~~~~~----~----~~~~~~~f~~~~~~~~----~~-~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 95 RVEI--RELYAVYSLP----H----ISQVYMLFRAKLLDLD----FF-PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp CEEE--EEEEEEEEEG----G----GTEEEEEEEEEECCSC----CC-CCTTEEEEEEECTTTCC
T ss_pred cccc--ceeEEEEecC----C----CcEEEEEEEEEeCCCc----cC-CCccceeEEEECHHHcC
Confidence 8653 2233333221 1 2356778888764432 22 35799999999999995
No 42
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.48 E-value=7e-14 Score=138.33 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=85.8
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.++.+++++ .+++|||++|... ..++|.|++| ||++++|||+.+||+||++||||+.+. .+..++.+.. ..
T Consensus 42 ~~v~v~i~~-~~~~vLL~~r~~~-~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~----~~ 112 (182)
T 2yvp_A 42 AASFVLPVT-ERGTALLVRQYRH-PTGKFLLEVP-AGKVDEGETPEAAARRELREEVGAEAE--TLIPLPSFHP----QP 112 (182)
T ss_dssp EEEEEEEBC-TTSEEEEEEEEEG-GGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCEECS--CEEECCCBCS----CT
T ss_pred CEEEEEEEc-CCCEEEEEEeccC-CCCCcEEEec-cccCCCCcCHHHHHHHHHHHHhCCCcc--cEEEEEEEeC----CC
Confidence 477787887 5789999988754 3468999999 999999999999999999999999864 3555544321 11
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
+ ..+...++|.+...... .....+++|+.++.|++++++.+++..+
T Consensus 113 ~--~~~~~~~~f~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 113 S--FTAVVFHPFLALKARVV--TPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp T--TBCCEEEEEEECSCEEC--SCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred C--ccccEEEEEEEeccccC--CCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 1 12346677776532111 1234567899999999999999988753
No 43
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.48 E-value=9.4e-14 Score=133.27 Aligned_cols=113 Identities=22% Similarity=0.374 Sum_probs=79.7
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecc
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNV 114 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~ 114 (779)
.+|.++.++|++ +++|||++| +|.|.+| ||++++|||+.+||+||++||||+.+... ..++.+.+...
T Consensus 17 ~~~~~~~~ii~~--~~~vLl~~r-------~~~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~ 84 (154)
T 2pqv_A 17 VFGVRATALIVQ--NHKLLVTKD-------KGKYYTI-GGAIQVNESTEDAVVREVKEELGVKAQAG--QLAFVVENRFE 84 (154)
T ss_dssp EEEEEEEECCEE--TTEEEEEEE-------TTEEECE-EEECBTTCCHHHHHHHHHHHHHCCCEEEE--EEEEEEEEEEE
T ss_pred eEeEEEEEEEEE--CCEEEEEec-------CCeEECc-ccCcCCCCCHHHHHHHHHHHHhCCeeeec--eEEEEEeeeec
Confidence 456777787877 689999998 5899999 99999999999999999999999997543 33333322211
Q ss_pred cCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 115 INDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 115 ~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
. .+ ...+.+.++|.+......+. ....++|+.+++|++++++.++
T Consensus 85 ~-~~-~~~~~~~~~f~~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 85 V-DG-VSYHNIEFHYLVDLLEDAPL--TMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp E-TT-EEEEEEEEEEEEEESSCCCS--EEEETTEEEEEEEEEGGGGGGS
T ss_pred C-CC-CcceEEEEEEEEEecCCCCc--ccCCCCceeeEEEeEHHHHhhc
Confidence 1 11 12344566787776443210 1123568999999999999764
No 44
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.47 E-value=1.3e-13 Score=134.87 Aligned_cols=117 Identities=13% Similarity=0.250 Sum_probs=76.8
Q ss_pred cCCceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEe
Q 004012 32 RVGDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (779)
Q Consensus 32 ~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~ 111 (779)
.....+..|.++|++ +++|||+||... +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+
T Consensus 18 ~~~~~~~~v~~ii~~--~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~~~~~~~ 88 (171)
T 3id9_A 18 IENIMQVRVTGILIE--DEKVLLVKQKVA----NRDWSLP-GGRVENGETLEEAMIREMREETGLEVKI--KKLLYVCDK 88 (171)
T ss_dssp ----CEEEEEEEEEE--TTEEEEEECSST----TCCEECC-EEECCTTCCHHHHHHHHHHHHHCCCEEE--EEEEEEEEE
T ss_pred cCCceEEEEEEEEEE--CCEEEEEEEECC----CCeEECC-CccCCCCCCHHHHHHHHHHHHHCCcccc--ceEEEEEcc
Confidence 344567778888887 589999998763 7999999 9999999999999999999999999643 333443333
Q ss_pred ecccCCCcccceEEEEEEEEEEcCCCC-CcCccCCccceeeEEEeCHHHHHhH
Q 004012 112 QNVINDGKFINNEFADVYLVTTLNPIP-LEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 112 ~~~~~~g~~~~~e~~~vf~~~~~~~~~-~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
.. .. ......+|.+....... .....++++|+.+++|++++++.++
T Consensus 89 ~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 89 PD--AS----PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp TT--SS----SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG
T ss_pred cC--CC----CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 21 11 12344556665543321 1111235689999999999999765
No 45
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.47 E-value=6.7e-14 Score=143.43 Aligned_cols=143 Identities=20% Similarity=0.209 Sum_probs=87.7
Q ss_pred EEEECCCCccccccccccccccCCceeEEEEEEEEecCCCEEEEEEeCCCC-----------------------------
Q 004012 11 LDVLTMTGQKTGITKPRSEVHRVGDYHRTVNAWIFAESTQELLLQRRADFK----------------------------- 61 (779)
Q Consensus 11 ~~vvd~~~~~~G~~~~R~~~h~~g~~hr~v~v~V~~~~~gkVLL~rRs~~k----------------------------- 61 (779)
+.+.+.+|+ ...|..++. |.+|+++++++.++++||+|+....
T Consensus 18 ~~~~~~~G~----~~~~e~v~~----~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T 3q91_A 18 LYFQSMNGA----QKSWDFMKT----HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPAL 89 (218)
T ss_dssp ---------------------C----CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC----------------------
T ss_pred EEEECCCCC----EEEEEEEEc----CCeEEEEEEECCCCEEEEEEcccccccccccccccccccccccccccccccccc
Confidence 444444443 234555444 5689999998556788887643211
Q ss_pred -CCCCCCeeccccccCCC-CCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCC-
Q 004012 62 -DSWPGMWDISSAGHISA-GDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP- 138 (779)
Q Consensus 62 -~~~pG~W~~PvGG~ve~-GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~- 138 (779)
...++.|++| ||++++ |||+.+||+||++||||+.+....+..++.+.... | ...+.+++|.+.......
T Consensus 90 ~~~~~~~welP-gG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~----g--~~~~~~~~f~a~~~~~~~~ 162 (218)
T 3q91_A 90 PGSAGVTVELC-AGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGV----G--LTGSRQTMFYTEVTDAQRS 162 (218)
T ss_dssp ---CCEEEECE-EEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---------CCEEEEEEEEEECGGGBC
T ss_pred ccCCCeEEECC-cceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCC----C--ccceEEEEEEEEECCcccc
Confidence 1126899999 999999 99999999999999999997555678887764321 1 124567888887643211
Q ss_pred -CcCccCCccceeeEEEeCHHHHHhHHhcCC
Q 004012 139 -LEAFTLQQTEVSAVKYIAYEEYKNLLAKDD 168 (779)
Q Consensus 139 -~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~~ 168 (779)
.....++++|+.++.|+|++++.+++.++.
T Consensus 163 ~~~~~~~d~~E~~ev~wv~l~el~~~i~~g~ 193 (218)
T 3q91_A 163 GPGGGLVEEGELIEVVHLPLEGAQAFADDPD 193 (218)
T ss_dssp C---------CCEEEEEEEGGGHHHHHHCTT
T ss_pred cCCCCCCCCCcEEEEEEEEHHHHHHHHHcCC
Confidence 112356678999999999999999998654
No 46
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.47 E-value=7.6e-14 Score=138.99 Aligned_cols=119 Identities=14% Similarity=0.108 Sum_probs=81.7
Q ss_pred ceeEEEEEEEEec--C----CCEEEEEEeCC-----CCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCe
Q 004012 35 DYHRTVNAWIFAE--S----TQELLLQRRAD-----FKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAF 103 (779)
Q Consensus 35 ~~hr~v~v~V~~~--~----~gkVLL~rRs~-----~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l 103 (779)
..|.+|.++|+.. . +++|||++|+. .+..++|.|.+| ||++++|||+.+||+||++||||+.+. .+
T Consensus 25 p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs~~~aa~REl~EEtGl~~~--~~ 101 (187)
T 3i9x_A 25 PDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENESAEQAAERELEEETSLTDI--PL 101 (187)
T ss_dssp CSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCCSC--CC
T ss_pred cccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCCHHHHHHHHHHHHHCCCCc--ce
Confidence 3456777777542 2 35899999964 335678999999 999999999999999999999999864 45
Q ss_pred EEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 104 EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 104 ~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
..++.+.......+ .+.+..+|.+....... ......+|+.+++|++++++.+
T Consensus 102 ~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 102 IPFGVFDKPGRDPR----GWIISRAFYAIVPPEAL--EKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp EEEEEECCTTSSTT----SSEEEEEEEEECCHHHH--HHHHHSTTTTTEEEEEHHHHTT
T ss_pred EEEEEEcCCccCCC----CCEEEEEEEEEEcCccc--CCcCCCCceeEEEEEeHHHccc
Confidence 66666543322222 23455566554422110 0123457899999999999964
No 47
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.46 E-value=3.1e-13 Score=132.00 Aligned_cols=118 Identities=17% Similarity=0.251 Sum_probs=83.7
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEee--
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQ-- 112 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~-- 112 (779)
.+|.++++++++ .+++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+...
T Consensus 6 ~~~~~v~~~i~~-~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~~~~ 76 (164)
T 2kdv_A 6 GYRPNVGIVICN-RQGQVMWARRFG-----QHSWQFP-QGGINPGESAEQAMYRELFEEVGLSRKD--VRILASTRNWLR 76 (164)
T ss_dssp SEEEEEEEEEEC-TTSEEEEEEETT-----CCCEECC-EEECCTTCCHHHHHHHHHHHHHCCCGGG--EEEEEECSSCEE
T ss_pred CCCcEEEEEEEc-cCCEEEEEEEcC-----CCeEECC-eeecCCCCCHHHHHHHHHHHHHCCCccc--eEEEEEecceeE
Confidence 578899999998 478999999874 6899999 9999999999999999999999999753 5555553210
Q ss_pred cccCCC-------cccceEEEEEEEEEEcCCCCCcCccCC---ccceeeEEEeCHHHHHhH
Q 004012 113 NVINDG-------KFINNEFADVYLVTTLNPIPLEAFTLQ---QTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 113 ~~~~~g-------~~~~~e~~~vf~~~~~~~~~~~~i~~~---~~Ev~e~~Wv~~eEl~~~ 163 (779)
+..+++ ........++|.+....+.. .+.++ ..|+.+++|++++++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~--~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 77 YKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDA--EINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp EECCTTTCCTTSSSCCCEEEEEEEEEEESSCGG--GCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred EecCcceeeeccCcccccceeEEEEEEecCCcc--ccccCCCCCchhceEEEecHHHhhhh
Confidence 111111 01122356778777654321 23333 369999999999998554
No 48
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.45 E-value=3.4e-13 Score=135.82 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=76.2
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.+|.+++++..+++|||+||.. .++|.|.+| ||++++|||+.+||+||++||||+.+... ..++ +......++
T Consensus 27 v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs~~~aA~REl~EEtGl~~~~~--~l~~-~~~~~~~~~ 99 (199)
T 3h95_A 27 VGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEEDIGDTAVREVFEETGIKSEFR--SVLS-IRQQHTNPG 99 (199)
T ss_dssp CEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCCHHHHHHHHHHHHHCCCEEEE--EEEE-EEECC----
T ss_pred ceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCCHHHHHHHHHHHHhCCccccc--eEEE-EEeeecCCC
Confidence 4577777775568999999865 257999999 99999999999999999999999996532 2222 111111111
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
+ ......+|.+.+.... ..+.++++|+.+++|++++++.++.
T Consensus 100 ~---~~~~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 100 A---FGKSDMYIICRLKPYS--FTINFCQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp --------CEEEEEEEEESC--CCCCCCTTTEEEEEEEEHHHHHHCS
T ss_pred C---ceeEEEEEEEEEcCCC--cccCCCccceeeeEEEeHHHHhhhh
Confidence 1 1112233334332211 1245677899999999999998753
No 49
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.44 E-value=4.7e-13 Score=134.08 Aligned_cols=120 Identities=13% Similarity=0.206 Sum_probs=84.3
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCC----CC-CCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEe
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFK----DS-WPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k----~~-~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~ 111 (779)
|.+|.++++++.++++||+++.... .. .++.|++| ||+++ |||+.+||+||++||||+.+ ..+..++.+..
T Consensus 45 ~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~~~~aa~REl~EEtG~~~--~~~~~l~~~~~ 120 (191)
T 3o6z_A 45 GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDEPEVCIRKEAIEETGYEV--GEVRKLFELYM 120 (191)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSCHHHHHHHHHHHHC-CCC--SCEEEEEEEES
T ss_pred CCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCCHHHHHHHHHHHHhCCcc--CcEEEEEEEEe
Confidence 4578888888556899998765321 11 57899999 99999 99999999999999999996 35777776533
Q ss_pred ecccCCCcccceEEEEEEEEEEcCCCCCcC-ccCCccceeeEEEeCHHHHHhHHhcC
Q 004012 112 QNVINDGKFINNEFADVYLVTTLNPIPLEA-FTLQQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 112 ~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~-i~~~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
. .+ ......++|.+.......... ..+ ++|+.++.|+|++++.+++.++
T Consensus 121 ~----~~--~~~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 121 S----PG--GVTELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp C----TT--TBCCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHHHHHS
T ss_pred C----CC--ccCcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHHHHcC
Confidence 2 12 123467788887643221100 122 6899999999999999998864
No 50
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.44 E-value=7e-13 Score=124.91 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=76.7
Q ss_pred eEEEEEEEEe-cCCCE--EEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 37 HRTVNAWIFA-ESTQE--LLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 37 hr~v~v~V~~-~~~gk--VLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
+.+++++|++ +.+++ |||+||+.. |+.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+....
T Consensus 9 ~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~ 81 (139)
T 2yyh_A 9 LLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGERVEEAAAREMREETGLEVRL--HKLMGVYSDPE 81 (139)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCCHHHHHHHHHHHHHCCCCEE--EEEEEEECCTT
T ss_pred eEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCCHHHHHHHHHHHHHCCCccc--ceEEEEECCCC
Confidence 4566666664 13577 999999753 4559999 9999999999999999999999998643 34444443211
Q ss_pred ccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHH
Q 004012 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~ 161 (779)
... ..+.+.++|.+..... +. .++|+.+++|++++++.
T Consensus 82 --~~~--~~~~~~~~f~~~~~~~-----~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 82 --RDP--RAHVVSVVWIGDAQGE-----PK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp --SCT--TSCEEEEEEEEEEESC-----CC-CCTTEEEEEEECTTSCC
T ss_pred --cCC--CceEEEEEEEEecCCc-----cC-CCCCcceEEEEEHHHCC
Confidence 111 1345677888876321 12 45799999999999996
No 51
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.43 E-value=2.3e-13 Score=138.06 Aligned_cols=118 Identities=17% Similarity=0.290 Sum_probs=79.3
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCC-CCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHIS-AGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve-~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
.+|.+++++ .+++|||++|.... .++|.|.+| ||+++ +|||+.+||+||++||||+.+. .+..++.+ +. .+
T Consensus 44 ~av~v~i~~-~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~-~~--~~ 115 (207)
T 1mk1_A 44 GAVAIVAMD-DNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEPPHLTAARELREEVGLQAS--TWQVLVDL-DT--AP 115 (207)
T ss_dssp CEEEEEECC-TTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCCHHHHHHHHHHHHHCEEEE--EEEEEEEE-CS--CT
T ss_pred CEEEEEEEc-CCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCCHHHHHHHHHHHHHCCccc--ccEEEEEE-Ec--CC
Confidence 377787787 57899999876543 567899999 99999 9999999999999999999864 34555554 21 12
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
+. ..+..++|.+........ ....+++|+.++.|++++++.+++..+
T Consensus 116 ~~---~~~~~~~f~~~~~~~~~~-~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 116 GF---SDESVRVYLATGLREVGR-PEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp TT---BCCCEEEEEEEEEEECCC-----------CEEEEEHHHHHHHHHTT
T ss_pred Cc---cccEEEEEEEEccccCCC-CCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 21 223566777765432210 012456899999999999999988753
No 52
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.43 E-value=5.3e-13 Score=134.61 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=83.4
Q ss_pred EEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCC
Q 004012 39 TVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDG 118 (779)
Q Consensus 39 ~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g 118 (779)
+|.+++++ .+ +|||++|... ...+|.|++| ||++++|||+.+||+||++||||+.+. .+..++.+... .+
T Consensus 51 av~vl~~~-~~-~vLLvrq~r~-~~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl~~~--~~~~l~~~~~~----~~ 120 (198)
T 1vhz_A 51 AVMIVPIV-DD-HLILIREYAV-GTESYELGFS-KGLIDPGESVYEAANRELKEEVGFGAN--DLTFLKKLSMA----PS 120 (198)
T ss_dssp EEEEEEEE-TT-EEEEEEEEET-TTTEEEEECE-EEECCTTCCHHHHHHHHHHHHHSEEEE--EEEEEEEEECC----TT
T ss_pred EEEEEEEE-CC-EEEEEEcccC-CCCCcEEEeC-cccCCCCcCHHHHHHHHHHHHHCCCcC--ceEEEEEEeCC----CC
Confidence 67777777 34 9999877543 3457899999 999999999999999999999999864 45666665432 12
Q ss_pred cccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHhc
Q 004012 119 KFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (779)
Q Consensus 119 ~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~ 166 (779)
......++|.+...... ....+++|+.++.|++++++.+++..
T Consensus 121 --~~~~~~~~f~a~~~~~~---~~~~~~~E~~~~~w~~~~el~~~~~~ 163 (198)
T 1vhz_A 121 --YFSSKMNIVVAQDLYPE---SLEGDEPEPLPQVRWPLAHMMDLLED 163 (198)
T ss_dssp --TCCCEEEEEEEEEEEEC---CCCCCCSSCCCEEEEEGGGGGGGGGC
T ss_pred --ccCcEEEEEEEEeCCcc---cCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 12345677877653321 13456789999999999999998775
No 53
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.43 E-value=4.2e-13 Score=127.41 Aligned_cols=112 Identities=21% Similarity=0.444 Sum_probs=75.8
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
++++++|++..+++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..+..+... .. .
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~-~~-~ 74 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDENDIDCCIREVKEEIGFDLTD--YIDDNQFIER-NI-Q 74 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSCHHHHHHHHHHHHTSCCCSS--SSCSSCEEEE-EE-T
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCCHHHHHHHHHHHHHCCCchH--hccccccccc-cc-C
Confidence 4567777774348999998763 5899999 9999999999999999999999998653 2111222111 01 1
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccC-CccceeeEEEeCHHHHHhHHhc
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLAK 166 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~-~~~Ev~e~~Wv~~eEl~~~l~~ 166 (779)
+ ...++|.+...... ....+ .++|+.++.|++++++.+++..
T Consensus 75 ~-----~~~~~~~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 75 G-----KNYKIFLISGVSEV--FNFKPQVRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp T-----EEEEEEEECCCCSS--SCCCCCCSSSCCCEEEEEHHHHHTGGGC
T ss_pred C-----ceEEEEEEEecccc--ccCCcCCcchhheeEEeEHHHHHhhhcc
Confidence 1 23455555432211 11233 3689999999999999987664
No 54
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.43 E-value=7.6e-13 Score=139.74 Aligned_cols=118 Identities=13% Similarity=0.202 Sum_probs=86.1
Q ss_pred cccccccCCceeE----EEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCC
Q 004012 26 PRSEVHRVGDYHR----TVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKD 101 (779)
Q Consensus 26 ~R~~~h~~g~~hr----~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~ 101 (779)
.|..|..+|..|. .+.+++++ .+++|||+||...+ +|+|++| ||++++|||+++||+||++||||+.+.
T Consensus 124 ~~~~C~~C~~~~yp~~~~~viv~v~-~~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt~eeAa~REv~EEtGl~v~-- 196 (269)
T 1vk6_A 124 WAMLCSHCRERYYPQIAPCIIVAIR-RDDSILLAQHTRHR---NGVHTVL-AGFVEVGETLEQAVAREVMEESGIKVK-- 196 (269)
T ss_dssp SCEEESSSSCEECCCCEEEEEEEEE-ETTEEEEEEETTTC---SSCCBCE-EEECCTTCCHHHHHHHHHHHHHCCEEE--
T ss_pred eeeeCCCCCCEecCCCCcEEEEEEE-eCCEEEEEEecCCC---CCcEECC-cCcCCCCCCHHHHHHHHHHHHhCceee--
Confidence 4666667775442 23333344 36899999998642 6999999 999999999999999999999999974
Q ss_pred CeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 102 AFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 102 ~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
.+..++.+.+.. .+....+|.+....+ .+.++++|+.+++|++++++..
T Consensus 197 ~~~~~~~~~~~~--------~~~~~~~f~a~~~~~----~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 197 NLRYVTSQPWPF--------PQSLMTAFMAEYDSG----DIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp EEEEEEEEEEET--------TEEEEEEEEEEEEEC----CCCCCTTTEEEEEEEETTSCCS
T ss_pred eEEEEEEEecCC--------CCEEEEEEEEEECCC----CcCCCCcceEEEEEEEHHHhhh
Confidence 466666554322 134567787776443 2456678999999999999854
No 55
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.42 E-value=9.7e-13 Score=133.78 Aligned_cols=121 Identities=19% Similarity=0.181 Sum_probs=82.8
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCC----CCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKD----SWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~----~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
.+|.++++++.+++|||+++..... ..++.|++| ||++++|||+.+||+||++||||+.+. .+..++.+..
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~~~~aA~REl~EEtGl~~~--~~~~l~~~~~-- 132 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGESVEDVARREAIEEAGLIVK--RTKPVLSFLA-- 132 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCCHHHHHHHHHHHHHCCCCC--CEEEEEEEES--
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcCHHHHHHHHHHHHcCcccC--cEEEeEEEec--
Confidence 4788888885568998865432211 125789999 999999999999999999999999863 5777776532
Q ss_pred ccCCCcccceEEEEEEEEEEcCC-CCCcCccCCccceeeEEEeCHHHHHhHHhcC
Q 004012 114 VINDGKFINNEFADVYLVTTLNP-IPLEAFTLQQTEVSAVKYIAYEEYKNLLAKD 167 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~-~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~ 167 (779)
..| ...+..++|.+..... ........+++|+.++.|+|++++.+++.++
T Consensus 133 --~~g--~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 133 --SPG--GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp --CTT--TBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred --CCC--ccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 122 1234678888875221 1100123466788899999999999998764
No 56
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.42 E-value=5.5e-13 Score=135.12 Aligned_cols=111 Identities=18% Similarity=0.293 Sum_probs=78.5
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
+.++.++|++ +++|||+||.. +|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.......
T Consensus 68 ~~~v~~vv~~--~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~v~~--~~~l~~~~~~~~~~ 137 (205)
T 3q1p_A 68 KVDIRAVVFQ--NEKLLFVKEKS-----DGKWALP-GGWADVGYTPTEVAAKEVFEETGYEVDH--FKLLAIFDKEKHQP 137 (205)
T ss_dssp EEEEEEEEEE--TTEEEEEEC--------CCEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE--EEEEEEEEHHHHSC
T ss_pred cceEEEEEEE--CCEEEEEEEcC-----CCcEECC-cCccCCCCCHHHHHHHHHHHHHCCcccc--ceEEEEEeccccCC
Confidence 4567778887 68999999863 6899999 9999999999999999999999999753 44444443322111
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
.+ ...+.+..+|.+...++. +..+ .|+.++.|++++++.++
T Consensus 138 ~~-~~~~~~~~~~~~~~~~~~----~~~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 138 SP-SATHVYKIFIGCEIIGGE----KKTS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp CC-CSSCEEEEEEEEEEEEEC----CCCC-TTSCCEEEECTTSCCCB
T ss_pred CC-CCceEEEEEEEEEecCCc----cCCC-CcceEEEEEeHHHhhhc
Confidence 11 123456667777664332 2344 79999999999999654
No 57
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.41 E-value=5.2e-13 Score=134.28 Aligned_cols=116 Identities=20% Similarity=0.257 Sum_probs=77.6
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 34 g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
+..++++.+++.+..+++|||+||.. .||.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+...
T Consensus 38 ~~~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt~~eaa~REl~EEtGl~~~~--~~~l~~~~~~- 109 (194)
T 2fvv_A 38 GYKKRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEEPSVAAVREVCEEAGVKGTL--GRLVGIFENQ- 109 (194)
T ss_dssp SCEEEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCCHHHHHHHHHHHHHCEEEEE--EEEEEEEEET-
T ss_pred CccccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcCHHHHHHHHHHHHhCCcccc--ceEEEEEEcC-
Confidence 33445544444233468999999864 36899999 9999999999999999999999998643 4455555431
Q ss_pred ccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHHhc
Q 004012 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAK 166 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~ 166 (779)
.. ....++|.+.+..... .......+..+++|++++++.+++..
T Consensus 110 ---~~----~~~~~~f~~~~~~~~~--~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 110 ---ER----KHRTYVYVLIVTEVLE--DWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp ---TT----TEEEEEEEEEEEEECS--SCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred ---CC----ceEEEEEEEEEccccC--CCCCcccccceEEEEEHHHHHHHHhc
Confidence 11 1245667665532211 11111234578999999999887654
No 58
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.41 E-value=3.3e-14 Score=131.54 Aligned_cols=104 Identities=20% Similarity=0.239 Sum_probs=74.5
Q ss_pred EEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCCcccc
Q 004012 43 WIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFIN 122 (779)
Q Consensus 43 ~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g~~~~ 122 (779)
+|++ .+++|||+||+.. ..++|.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.+. .++ .
T Consensus 10 ii~~-~~~~vLl~~r~~~-~~~~g~w~~P-gG~~e~gE~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~~--~~~----~ 78 (129)
T 1mut_A 10 IIRN-ENNEIFITRRAAD-AHMANKLEFP-GGKIEMGETPEQAVVRELQEEVGITPQH--FSLFEKLEYE--FPD----R 78 (129)
T ss_dssp ECEE-TTTEEEEEECSSC-CSSSCCEECC-CCCSSSCSSTTHHHHHHHHTTTCCSSCE--ECCCCCCBCC--CSS----C
T ss_pred EEEe-cCCEEEEEEeCCC-CCCCCeEECC-ccCcCCCCCHHHHHHHHHHHHhCCcccc--ceEEEEEEEe--cCC----c
Confidence 3445 4789999999876 3789999999 9999999999999999999999998643 2223322221 111 2
Q ss_pred eEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 123 NEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 123 ~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+...++|.+..... .+.++|+.++.|++++++.++
T Consensus 79 ~~~~~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 79 HITLWFWLVERWEG------EPWGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp EEECCCEEEEECSS------CCCCCSSCCCEEEESSSCCTT
T ss_pred eEEEEEEEEEccCC------ccCCcccceeEEeCHHHcccc
Confidence 33456677765432 234568889999999999653
No 59
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.41 E-value=2.9e-13 Score=139.38 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=82.9
Q ss_pred eeEEEEEEEEe--cCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 36 YHRTVNAWIFA--ESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 36 ~hr~v~v~V~~--~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
.+.+|.++|+. +.+++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+. .+..++++....
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lP-GG~ve~gEs~~~Aa~REl~EEtGl~~~--~~~~l~~~~~~~ 86 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLM-GGFVQKDESVDDAAKRVLAELTGLENV--YMEQVGAFGAID 86 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECE-EEECCTTSCHHHHHHHHHHHHHCCCSC--EEEEEEEECCTT
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECC-eeccCCCCCHHHHHHHHHHHHHCCCCC--ceEEEEEeCCCC
Confidence 46778888873 34579999999763 467999999 999999999999999999999999864 355666654322
Q ss_pred ccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
..++ .+.+..+|.+.+.... ....++|+.++.|++++++.+
T Consensus 87 r~~~----~~~v~~~y~a~~~~~~----~~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 87 RDPG----ERVVSIAYYALININE----YDRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp SSSS----SCEEEEEEEEECCTTS----SCHHHHHHTTEEEEETTSCCC
T ss_pred cCCC----ceEEEEEEEEEecCcc----cccCCccccceEEEEHHHhhh
Confidence 2111 2445667777654321 233457899999999999843
No 60
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.41 E-value=9e-13 Score=131.70 Aligned_cols=110 Identities=22% Similarity=0.314 Sum_probs=74.9
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
.+++.++|++ +++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+... ..++.+.+....
T Consensus 4 ~~v~~~vi~~--~~~vLL~~r~~-----~g~W~lP-GG~ve~gEs~~~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~- 72 (188)
T 3fk9_A 4 QRVTNCIVVD--HDQVLLLQKPR-----RGWWVAP-GGKMEAGESILETVKREYWEETGITVKNP--ELKGIFSMVIFD- 72 (188)
T ss_dssp CEEEEEEEEE--TTEEEEEECTT-----TCCEECC-EEECCTTCCHHHHHHHHHHHHHSCEESSC--EEEEEEEEEEEE-
T ss_pred eEEEEEEEEE--CCEEEEEEeCC-----CCeEECC-eecccCCCCHHHHHHHHHHHHHCCCCCCc--eEEEEEEEEecC-
Confidence 4567777776 68999999853 6999999 99999999999999999999999997653 344444332211
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
++....+...++|.+....+. ... ..|..+++|++++++.+
T Consensus 73 ~~~~~~~~~~~~f~a~~~~~~----~~~-~~e~~~~~W~~~~el~~ 113 (188)
T 3fk9_A 73 EGKIVSEWMLFTFKATEHEGE----MLK-QSPEGKLEWKKKDEVLE 113 (188)
T ss_dssp TTEEEEEEEEEEEEESCEESC----CCS-EETTEEEEEEEGGGGGG
T ss_pred CCcceEEEEEEEEEEECCCCC----CcC-CCCCEeEEEEEHHHhhh
Confidence 111112225566666533221 122 34557899999999955
No 61
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.40 E-value=7.2e-13 Score=134.35 Aligned_cols=110 Identities=18% Similarity=0.267 Sum_probs=78.2
Q ss_pred eEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccC
Q 004012 37 HRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 37 hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~ 116 (779)
+.++.++|++ +++|||+||. +|.|.+| ||++++|||+.+||+||++||||+.+.. +..++.+.......
T Consensus 70 ~~~v~~vv~~--~~~vLLvrr~------~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~--~~~l~~~~~~~~~~ 138 (206)
T 3o8s_A 70 KLDTRAAIFQ--EDKILLVQEN------DGLWSLP-GGWCDVDQSVKDNVVKEVKEEAGLDVEA--QRVVAILDKHKNNP 138 (206)
T ss_dssp EEEEEEEEEE--TTEEEEEECT------TSCEECS-EEECCTTSCHHHHHHHHHHHHHCEEEEE--EEEEEEEEHHHHCC
T ss_pred CccEEEEEEE--CCEEEEEEec------CCeEECC-eeccCCCCCHHHHHHHHHHHHHCCccee--eeEEEEEeccccCC
Confidence 4567778887 5899999987 5899999 9999999999999999999999998643 44555544221111
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
.+ ...+.+..+|.+....+. +..+ .|+.++.|++++++.++
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~~----~~~~-~E~~~~~w~~~~el~~l 179 (206)
T 3o8s_A 139 AK-SAHRVTKVFILCRLLGGE----FQPN-SETVASGFFSLDDLPPL 179 (206)
T ss_dssp ------CEEEEEEEEEEEEEC----CCCC-SSCSEEEEECTTSCCCB
T ss_pred CC-CCceEEEEEEEEEecCCe----ecCC-CCceEEEEEeHHHhhhc
Confidence 11 123445666767654332 2333 79999999999999654
No 62
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.40 E-value=6.4e-13 Score=138.11 Aligned_cols=113 Identities=21% Similarity=0.289 Sum_probs=82.5
Q ss_pred eeEEEEEEEE--ecCCCEEEEEEeCCCCCCCCCCeeccccccCCC--CCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEe
Q 004012 36 YHRTVNAWIF--AESTQELLLQRRADFKDSWPGMWDISSAGHISA--GDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (779)
Q Consensus 36 ~hr~v~v~V~--~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~--GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~ 111 (779)
.+.+|.++|+ ++.+++|||++|.. ..++|.|.+| ||++++ |||+.+||+||++||||+.+. .+..++++..
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lP-GG~ve~~~gEs~~~AA~REl~EEtGl~~~--~~~~l~~~~~ 95 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLP-GGFIDETCDESLEQTVLRKLAEKTAVVPP--YIEQLCTVGN 95 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECS-EEECCTTTCSBHHHHHHHHHHHHHSSCCS--EEEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECC-ccccCCCCCcCHHHHHHHHHHHHHCCCCC--ceeeEEEeCC
Confidence 3567777776 43345899999985 3468999999 999999 999999999999999999863 4666666655
Q ss_pred ecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHH
Q 004012 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYK 161 (779)
Q Consensus 112 ~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~ 161 (779)
....++ .+.+..+|.+.+.... .....+|+.++.|++++++.
T Consensus 96 ~~r~~~----~~~~~~~y~a~~~~~~----~~~~~~e~~~~~W~~~~el~ 137 (240)
T 3gz5_A 96 NSRDAR----GWSVTVCYTALMSYQA----CQIQIASVSDVKWWPLADVL 137 (240)
T ss_dssp SSSSTT----SCEEEEEEEEECCHHH----HHHHHTTCTTEEEEEHHHHT
T ss_pred CccCCC----ceEEEEEEEEEecccc----cCCCCCcccceEEecHHHcc
Confidence 332222 2456667766543221 23345789999999999994
No 63
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.40 E-value=7.1e-13 Score=140.37 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=85.4
Q ss_pred eeEEEEEEEEecCC----CEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEe
Q 004012 36 YHRTVNAWIFAEST----QELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQ 111 (779)
Q Consensus 36 ~hr~v~v~V~~~~~----gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~ 111 (779)
.+.+|+++|+...+ ++|||++|... .++|.|.+| ||++++|||+.+||+||++||||+.+....+..++++..
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~~~~~ 114 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSR 114 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEEEECC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEEEEcC
Confidence 35677777764222 38999999864 467999999 999999999999999999999998876556777776643
Q ss_pred ecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhHH
Q 004012 112 QNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNLL 164 (779)
Q Consensus 112 ~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l 164 (779)
....+ ..+.+..+|.+.+.... ....+|+.++.|++++++.+.+
T Consensus 115 ~~r~~----~~~~~~~~y~a~~~~~~-----~~~~~E~~~~~W~~~~e~~~~~ 158 (273)
T 2fml_A 115 PDRDP----RGWVVTVSYLAFIGEEP-----LIAGDDAKEVHWFNLERHGQHI 158 (273)
T ss_dssp TTSST----TSSEEEEEEEEECCCCC-----CCCCTTEEEEEEEEEEEETTEE
T ss_pred CCCCC----CceEEEEEEEEEeCCCC-----CCCCcceeeEEEEEhhHhhhhh
Confidence 22111 13456777877653321 3445799999999999876654
No 64
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.39 E-value=2.6e-12 Score=140.22 Aligned_cols=121 Identities=19% Similarity=0.231 Sum_probs=83.5
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeE--EEEEEEee
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFE--FVFTFLQQ 112 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~--~l~~~~~~ 112 (779)
..+.++.++|++ +++|||+||...+ ++|.|.+| ||++++|||+.+||+||++||||+.+....+. ......+.
T Consensus 206 ~~~~~v~~vv~~--~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~ 280 (352)
T 2qjt_B 206 PNFVTVDALVIV--NDHILMVQRKAHP--GKDLWALP-GGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFD 280 (352)
T ss_dssp CEEEEEEEEEEE--TTEEEEEEESSSS--STTCEECS-EEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEEC
T ss_pred CCceEEEEEEEE--CCEEEEEEEcCCC--CCCeEECC-CCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEec
Confidence 456778888886 6899999997643 47999999 99999999999999999999999997532211 11122222
Q ss_pred cccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCH-HHHHhH
Q 004012 113 NVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAY-EEYKNL 163 (779)
Q Consensus 113 ~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~-eEl~~~ 163 (779)
. ++.....+.+.++|.+.+..+.. .....+++|+.+++|+++ +++.++
T Consensus 281 ~--~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 281 Y--PDRSVRGRTISHVGLFVFDQWPS-LPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp C--TTSCTTSEEEEEEEEEEECSCSS-CCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred C--CCCCCCccEEEEEEEEEEeCCCC-CCccCCCccceEEEEecHHHHHHhh
Confidence 1 11111234566778777644320 001234689999999999 999774
No 65
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.36 E-value=3.8e-12 Score=124.43 Aligned_cols=98 Identities=19% Similarity=0.342 Sum_probs=67.9
Q ss_pred CceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeec
Q 004012 34 GDYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQN 113 (779)
Q Consensus 34 g~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~ 113 (779)
.....++.+++.+ ++++||++|. +|.|.+| ||++++|||+.+||+||++||||+.+. .+..++++.+.
T Consensus 13 ~~~~~~~~~ii~~--~~~vLL~~r~------~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~--~~~~l~~~~~~- 80 (163)
T 3f13_A 13 SDLARRATAIIEM--PDGVLVTASR------GGRYNLP-GGKANRGELRSQALIREIREETGLRIN--SMLYLFDHITP- 80 (163)
T ss_dssp SSCEEEEEEECEE--TTEEEEEECC---------BBCS-EEECCTTCCHHHHHHHHHHHHHCCCCC--EEEEEEEEECS-
T ss_pred CCceEEEEEEEEe--CCEEEEEEEC------CCeEECC-ceeCCCCCCHHHHHHHHHHHHHCcccc--eeEEEEEEecC-
Confidence 3344555555555 6889999885 4899999 999999999999999999999999964 34555544321
Q ss_pred ccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHH
Q 004012 114 VINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYE 158 (779)
Q Consensus 114 ~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~e 158 (779)
....++|.+..... +.++ +|+.+++|++.+
T Consensus 81 ---------~~~~~~f~~~~~~~-----~~~~-~E~~~~~W~~~~ 110 (163)
T 3f13_A 81 ---------FNAHKVYLCIAQGQ-----PKPQ-NEIERIALVSSP 110 (163)
T ss_dssp ---------SEEEEEEEEEC-CC-----CCCC-TTCCEEEEESST
T ss_pred ---------CeEEEEEEEEECCc-----CccC-CCceEEEEECcc
Confidence 14566777764321 2444 499999999933
No 66
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.34 E-value=2.6e-12 Score=139.47 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=78.2
Q ss_pred ceeEEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCC----eEEEEEEE
Q 004012 35 DYHRTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDA----FEFVFTFL 110 (779)
Q Consensus 35 ~~hr~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~----l~~l~~~~ 110 (779)
..+.++.++|++ +++|||+||... .++|.|.+| ||++++|||+.+||+||++||||+.+.... +.....+.
T Consensus 201 ~~~~~v~~vi~~--~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 275 (341)
T 2qjo_A 201 PTFITTDAVVVQ--AGHVLMVRRQAK--PGLGLIALP-GGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFD 275 (341)
T ss_dssp CCEEEEEEEEEE--TTEEEEEECCSS--SSTTCEECS-EEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEEC
T ss_pred CCceEEEEEEEe--CCEEEEEEecCC--CCCCeEECC-CCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEe
Confidence 456788888886 689999999764 347999999 999999999999999999999999975322 11222222
Q ss_pred eecccCCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 111 QQNVINDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 111 ~~~~~~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
+ ++.....+.+.++|.+....+.. ....+++|+.+++|++++++.++
T Consensus 276 ~----~~~~~~~~~~~~~f~~~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 276 A----PGRSLRGRTITHAYFIQLPGGEL--PAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp C----TTSCTTSCEEEEEEEEECCSSSC--CCCC------CEEEEEHHHHHHT
T ss_pred C----CCCCCCCcEEEEEEEEEecCCCc--CccCCCCceeeEEEeeHHHHhhh
Confidence 2 11111124566778776543221 01245689999999999999874
No 67
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.34 E-value=4.9e-12 Score=121.96 Aligned_cols=55 Identities=20% Similarity=0.408 Sum_probs=48.2
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPK 100 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~ 100 (779)
.+++++|++ +++|||++|.. +|.|.+| ||++++|||+.+||+||++||||+.+..
T Consensus 2 ~~~~~vi~~--~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 2 IVTSGVLVE--NGKVLLVKHKR-----LGVYIYP-GGHVEHNETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp EEEEEECEE--TTEEEEEECTT-----TCSEECS-EEECCTTCCHHHHHHHHHHHHHSEEEEE
T ss_pred eEEEEEEEE--CCEEEEEEEcC-----CCcEECC-eeecCCCCCHHHHHHHHHHHHHCCccee
Confidence 457777777 68999999864 5899999 9999999999999999999999998653
No 68
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.32 E-value=5.2e-12 Score=121.44 Aligned_cols=99 Identities=15% Similarity=0.226 Sum_probs=70.5
Q ss_pred CCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHH-HHHHHHHHHHhC-CccCCCCeEEEEEEEeecccCCCcccceEEE
Q 004012 49 TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSL-ISAQRELQEELG-INLPKDAFEFVFTFLQQNVINDGKFINNEFA 126 (779)
Q Consensus 49 ~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~-eAAlREl~EEtG-l~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~ 126 (779)
+++|||+||... ..++|+|++| ||++++||++. +||+||++|||| +.+. .+..++.+.+. ++. .+...
T Consensus 33 ~~~vLl~~R~~~-~~~~g~w~~P-gG~~e~gE~~~~~a~~REl~EE~g~l~~~--~~~~l~~~~~~--~~~----~~~~~ 102 (155)
T 1x51_A 33 GAQILLVQRPNS-GLLAGLWEFP-SVTWEPSEQLQRKALLQELQRWAGPLPAT--HLRHLGEVVHT--FSH----IKLTY 102 (155)
T ss_dssp SEEEEEEECCCC-STTCSCEECC-EEECCSSHHHHHHHHHHHHHHHSCCCCST--TCEECCCBCCB--CSS----CEEEE
T ss_pred CCEEEEEECCCC-CCCCceecCC-ccccCCCCCHHHHHHHHHHHHHhCCccee--eeeecceEEEe--cCC----ccEEE
Confidence 479999998764 5789999999 99999999996 999999999999 7753 23444433221 111 12345
Q ss_pred EEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHhH
Q 004012 127 DVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKNL 163 (779)
Q Consensus 127 ~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~ 163 (779)
++|.+..... .+...|..++.|++++++.++
T Consensus 103 ~~~~~~~~~~------~~~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 103 QVYGLALEGQ------TPVTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EEEEEECSSC------CCCCCCCTTEEEEEHHHHHHS
T ss_pred EEEEEEEcCC------CCCCCCCCccEEccHHHhhhc
Confidence 6777765332 123356788999999999763
No 69
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.29 E-value=3.1e-12 Score=135.35 Aligned_cols=112 Identities=18% Similarity=0.255 Sum_probs=73.6
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.+++++|+++.+++|||++|.. .+|.|.+| ||++++|||+.+||+||++||||+.+.. +..+..+...
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEs~~eAA~REl~EEtGl~~~~--l~~~~~~~~~----- 169 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWK----ASSGWGFP-KGKIDKDESDVDCAIREVYEETGFDCSS--RINPNEFIDM----- 169 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESS----TTCCCBCS-EEECCTTCCHHHHHHHHHHHHHCCCCTT--TCCTTCEEEE-----
T ss_pred CeEEEEEEECCCCEEEEEEEeC----CCCeEECC-cccCCCCcCHHHHHHHHHHHHhCCCcee--eeeeeeeccC-----
Confidence 4567777774458999999865 26899999 9999999999999999999999999754 2221111110
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccC-CccceeeEEEeCHHHHHhHHh
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTL-QQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~-~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
+ ......++|.+...... ..+.+ +++|+.+++|++++++.++..
T Consensus 170 ~--~~~~~~~~f~~~~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~ 214 (271)
T 2a6t_A 170 T--IRGQNVRLYIIPGISLD--TRFESRTRKEISKIEWHNLMDLPTFKK 214 (271)
T ss_dssp E--ETTEEEEEEEECCCCTT--CCCC------EEEEEEEEGGGSTTCC-
T ss_pred C--cCCceEEEEEEEEecCc--ccCCCCCccceeEEEEEEHHHHHHHHh
Confidence 0 01234566766543211 11232 568999999999999977543
No 70
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.28 E-value=8.1e-12 Score=127.08 Aligned_cols=106 Identities=19% Similarity=0.104 Sum_probs=72.2
Q ss_pred CEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCCcccceEEEEEE
Q 004012 50 QELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKFINNEFADVY 129 (779)
Q Consensus 50 gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf 129 (779)
++|||+++... ...++.|++| ||++++|||+.+||+||++||||+.+.. +..++.+.. ..+ ..++..++|
T Consensus 77 ~~vlLv~q~R~-~~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl~~~~--~~~l~~~~~----~~~--~~~~~~~~~ 146 (212)
T 2dsc_A 77 ECIVLVKQFRP-PMGGYCIEFP-AGLIDDGETPEAAALRELEEETGYKGDI--AECSPAVCM----DPG--LSNCTIHIV 146 (212)
T ss_dssp CEEEEEEEEEG-GGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCCCCEE--EEECCCEES----CTT--TBCCEEEEE
T ss_pred cEEEEEEeecC-CCCCcEEECC-ccccCCCCCHHHHHHHHHHHHhCCCccc--eEEeccEEc----CCC--ccCceEEEE
Confidence 47888764322 1346799999 9999999999999999999999998532 333333221 112 123456777
Q ss_pred EEEEcCCCCC---cCccCCccceeeEEEeCHHHHHhHHh
Q 004012 130 LVTTLNPIPL---EAFTLQQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 130 ~~~~~~~~~~---~~i~~~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
.+.+...... ....++++|+.++.|++++++.+++.
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 147 TVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp EEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred EEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 7765322110 02345678999999999999998875
No 71
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.26 E-value=7.1e-12 Score=127.70 Aligned_cols=123 Identities=19% Similarity=0.235 Sum_probs=81.0
Q ss_pred cccccccCCceeEEEEEEEEec----------CCCEEEEEEeCCCCCCCCCCeeccccccCCCCC-CHHHHHHHHHHHHh
Q 004012 26 PRSEVHRVGDYHRTVNAWIFAE----------STQELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQEEL 94 (779)
Q Consensus 26 ~R~~~h~~g~~hr~v~v~V~~~----------~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GE-t~~eAAlREl~EEt 94 (779)
++...+..+..+.+++++++++ .+++|||++| ++|.|++| ||++++|| |+.+||+||++|||
T Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t~~~aa~REl~EEt 94 (212)
T 1u20_A 22 SREESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMR------FDGRLGFP-GGFVDTRDISLEEGLKRELEEEL 94 (212)
T ss_dssp CHHHHHSCSSCEEEEEEEEEEECCCEETTTEECCEEEEEEEE------TTSCEECS-EEEECTTTSCHHHHHHHHHHHHH
T ss_pred CHHHHhhcCCCcccceEEEeCCCceEEEEEEecCCEEEEEEe------CCCeEECC-CcccCCCCCCHHHHHHHHHHHHH
Confidence 3444444344455555555432 3568999988 36999999 99999999 99999999999999
Q ss_pred CCccCCCCe---EEEEEEEeecccCCCcccceEEEEEEEEEEcCCCCC------cCccCCccceeeEEEeCHHHHHh
Q 004012 95 GINLPKDAF---EFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIPL------EAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 95 Gl~v~~~~l---~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~~------~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
|+.+....+ ..++.+.+.. + .+...++|.+....+... .....++.|+.++.|+|++++.+
T Consensus 95 Gl~~~~~~l~~~~~~~~~~~~~--~-----~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 95 GPALATVEVTEDDYRSSQVREH--P-----QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp CGGGGGCCCCGGGEEEEEEECT--T-----SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred CCCccccceeeeeEEEeccccC--C-----CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 999764332 2444443322 1 135677887775321100 00122457899999999999854
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.19 E-value=1.9e-10 Score=118.72 Aligned_cols=126 Identities=17% Similarity=0.183 Sum_probs=85.5
Q ss_pred eeEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeccccccCCCCCC--------------------HHHHHHHHHHHH
Q 004012 36 YHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDS--------------------SLISAQRELQEE 93 (779)
Q Consensus 36 ~hr~v~v~V~~~~~g--kVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt--------------------~~eAAlREl~EE 93 (779)
.+.++.+++.+..++ +|||+||+.....+||.|.|| ||++++||+ +..||+||++||
T Consensus 8 r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 8 RKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 344455545442233 899999998877789999999 999999997 589999999999
Q ss_pred hCCccCC----------------------------------------CCeEEEEEEEeecccCCCcccceEEEEEEEEEE
Q 004012 94 LGINLPK----------------------------------------DAFEFVFTFLQQNVINDGKFINNEFADVYLVTT 133 (779)
Q Consensus 94 tGl~v~~----------------------------------------~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~ 133 (779)
|||.+.. ..|..+..+... .+ ...+.-+++|.+.+
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP----~~-~~rRfdT~FFla~l 161 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTP----PT-QPVRFDTRFFLCVG 161 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECC----TT-SSSEEEEEEEEEEC
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCC----cC-CceeEEEEEEEEEC
Confidence 9997421 112333333221 11 12234556666665
Q ss_pred cCCCCCcCccCCccceeeEEEeCHHHHHhHHhcCCCC
Q 004012 134 LNPIPLEAFTLQQTEVSAVKYIAYEEYKNLLAKDDPS 170 (779)
Q Consensus 134 ~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~~l~~~~~~ 170 (779)
.. .+ .+..+.+|+.++.|++++++.+...++...
T Consensus 162 pq-~~--~v~~d~~E~~~~~W~~p~eal~~~~~G~i~ 195 (232)
T 3qsj_A 162 QH-LG--EPRLHGAELDAALWTPARDMLTRIQSGELP 195 (232)
T ss_dssp SS-CC--CCCCCSSSEEEEEEEEHHHHHHHHHTTSSC
T ss_pred CC-CC--CCCCCCCceEEEEEEcHHHHHHHHHcCCce
Confidence 42 11 124577999999999999999988776543
No 73
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.16 E-value=6.4e-11 Score=130.28 Aligned_cols=108 Identities=14% Similarity=0.228 Sum_probs=70.7
Q ss_pred CCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCCCcc--------
Q 004012 49 TQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVINDGKF-------- 120 (779)
Q Consensus 49 ~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~g~~-------- 120 (779)
+.+|||++|.. .|.|.+| ||++++|||+.+||+||++||||+.+.. ...++.+.+.... +|..
T Consensus 37 ~~~vLLv~r~~-----~g~W~lP-gG~ve~gEs~~~AA~REl~EEtGl~~~~--~~~l~~~~~~~~~-~g~~~~~~~~~~ 107 (364)
T 3fjy_A 37 SIEVCIVHRPK-----YDDWSWP-KGKLEQNETHRHAAVREIGEETGSPVKL--GPYLCEVEYPLSE-EGKKTRHSHDCT 107 (364)
T ss_dssp TEEEEEEEETT-----TTEEECC-EEECCTTCCHHHHHHHHHHHHHSCCEEE--EEEEEEEC------------------
T ss_pred ceEEEEEEcCC-----CCCEECC-cCCCCCCCCHHHHHHHHHHHHhCCeeee--ccccceEEEeccC-CCcccccccccc
Confidence 45899999853 3899999 9999999999999999999999998753 3344443332211 1100
Q ss_pred cceEEEEEEEEEEcCCCC--------CcCccCCccceeeEEEeCHHHHHhHHh
Q 004012 121 INNEFADVYLVTTLNPIP--------LEAFTLQQTEVSAVKYIAYEEYKNLLA 165 (779)
Q Consensus 121 ~~~e~~~vf~~~~~~~~~--------~~~i~~~~~Ev~e~~Wv~~eEl~~~l~ 165 (779)
.....+++|.+....... .....++++|+.+++|++++++.+++.
T Consensus 108 ~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 108 ADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ----CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred cCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 013455667776543210 001134568999999999999988653
No 74
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.07 E-value=2.1e-10 Score=126.57 Aligned_cols=104 Identities=10% Similarity=0.128 Sum_probs=74.7
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCCCCeEEEEEEEeecccCC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPKDAFEFVFTFLQQNVIND 117 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~~~l~~l~~~~~~~~~~~ 117 (779)
.++.++|++ .+|+|||+||... ..|+|+|++| ||++++| |+.+|++||++||||+.+.... .++.+.+.. +.
T Consensus 241 ~~~~~vi~~-~~g~vLL~rR~~~-g~~~GlWefP-GG~ve~g-t~~~al~REl~EE~Gl~v~~~~--~l~~~~h~~--~h 312 (369)
T 3fsp_A 241 PLAVAVLAD-DEGRVLIRKRDST-GLLANLWEFP-SCETDGA-DGKEKLEQMVGEQYGLQVELTE--PIVSFEHAF--SH 312 (369)
T ss_dssp EEEEEEEEC-SSSEEEEEECCSS-STTTTCEECC-EEECSSS-CTHHHHHHHHTTSSSCCEEECC--CCCEEEEEC--SS
T ss_pred EEEEEEEEe-CCCEEEEEECCCC-CCcCCcccCC-CcccCCC-CcHHHHHHHHHHHhCCceeeec--ccccEEEEc--ce
Confidence 345555565 5789999999864 5789999999 9999999 9999999999999999875433 223332221 11
Q ss_pred CcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 118 GKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 118 g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
.+...++|.+..... ..|..++.|++++++.+
T Consensus 313 ----~~~~~~~~~~~~~~~---------~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 313 ----LVWQLTVFPGRLVHG---------GPVEEPYRLAPEDELKA 344 (369)
T ss_dssp ----EEEEEEEEEEEECCS---------SCCCTTEEEEEGGGGGG
T ss_pred ----EEEEEEEEEEEEcCC---------CCCccccEEeeHHHhhh
Confidence 233456666665321 35788999999999965
No 75
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.04 E-value=7.3e-10 Score=118.35 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=64.5
Q ss_pred EEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCC------------CCeE---EEEEEEeeccc
Q 004012 51 ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPK------------DAFE---FVFTFLQQNVI 115 (779)
Q Consensus 51 kVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~------------~~l~---~l~~~~~~~~~ 115 (779)
+|||++|.. .|.|.+| ||++++|||+.+||+||++||||+.+.. ..+. ....+......
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~d 213 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDD 213 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCC
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccC
Confidence 699999875 3899999 9999999999999999999999998311 1111 11111111111
Q ss_pred C-CCcccceEEEEEEEEEEcCCCCCcCc-cCCccceeeEEEeCHHHHH
Q 004012 116 N-DGKFINNEFADVYLVTTLNPIPLEAF-TLQQTEVSAVKYIAYEEYK 161 (779)
Q Consensus 116 ~-~g~~~~~e~~~vf~~~~~~~~~~~~i-~~~~~Ev~e~~Wv~~eEl~ 161 (779)
+ ++. ..+.+..+|.+........... ....+|+.+++|++++++.
T Consensus 214 pr~~d-~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~ 260 (292)
T 1q33_A 214 PRNTD-NAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKL 260 (292)
T ss_dssp TTCCS-SEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTC
T ss_pred CCCCc-ccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCc
Confidence 1 110 1133455665554322111111 2345799999999999984
No 76
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.81 E-value=1.6e-09 Score=110.72 Aligned_cols=97 Identities=20% Similarity=0.162 Sum_probs=64.2
Q ss_pred CEEEEEEeCCCCCCCCCCeeccccccCCCCC-CHHHHHHHHHHHHhCCccCCCCe---EEEEEEEeecccCCCcccceEE
Q 004012 50 QELLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQEELGINLPKDAF---EFVFTFLQQNVINDGKFINNEF 125 (779)
Q Consensus 50 gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GE-t~~eAAlREl~EEtGl~v~~~~l---~~l~~~~~~~~~~~g~~~~~e~ 125 (779)
+++|+++|. +|.|++| ||++++|| |+.+||+||++||||+.+....+ ..+..... . ..+.+
T Consensus 65 ~~~ll~~r~------~g~w~lP-GG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~------~--~~~~~ 129 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFP-GGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVG------S--GPRVV 129 (217)
T ss_dssp EEEEEEEET------TSCEECS-EEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEC------S--SSSEE
T ss_pred CcEEEEEcc------CCeEECC-ceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCC------C--CCeEE
Confidence 356776664 5899999 99999999 99999999999999998763222 22222111 0 12456
Q ss_pred EEEEEEEEcCCCC--Cc----CccCCccceeeEEEeCHHHHH
Q 004012 126 ADVYLVTTLNPIP--LE----AFTLQQTEVSAVKYIAYEEYK 161 (779)
Q Consensus 126 ~~vf~~~~~~~~~--~~----~i~~~~~Ev~e~~Wv~~eEl~ 161 (779)
..+|.+.+..... .+ .......|+.++.|+|++++.
T Consensus 130 ~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 130 AHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp EEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred EEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 6667666532110 00 002234789999999999984
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.43 E-value=1.3e-07 Score=93.13 Aligned_cols=121 Identities=20% Similarity=0.254 Sum_probs=76.5
Q ss_pred ccccccccCC-ceeEEEEEEEEecCCCE----------EEEEEeCCCCCCCCCCeeccccccCCCCC-CHHHHHHHHHHH
Q 004012 25 KPRSEVHRVG-DYHRTVNAWIFAESTQE----------LLLQRRADFKDSWPGMWDISSAGHISAGD-SSLISAQRELQE 92 (779)
Q Consensus 25 ~~R~~~h~~g-~~hr~v~v~V~~~~~gk----------VLL~rRs~~k~~~pG~W~~PvGG~ve~GE-t~~eAAlREl~E 92 (779)
.+|.++-..| -+..+.+++++.++.++ |||+.|- .|.|+|| ||+||+|| |+++|+.||+.|
T Consensus 8 i~~~eal~~~~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~------~G~weFP-GGkVe~gE~t~e~aL~REl~E 80 (214)
T 3kvh_A 8 ISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRF------DGLLGFP-GGFVDRRFWSLEDGLNRVLGL 80 (214)
T ss_dssp ECHHHHTTSCTTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEET------TSCEECS-EEEECTTTCCHHHHHHHSCCS
T ss_pred cCHHHHHhhccCccEeeEEEEEcCCccccccccchhheEEEeeee------CCEEeCC-CccCCCCCCCHHHHHHHHHHH
Confidence 3566665553 46678888888754333 7888775 3999999 99999999 999999999999
Q ss_pred HhCC-ccCCCCeEEEEEEEeecccCCCcccceEEEEEEEEEEcCCCC----CcCccCC--ccceeeEEEeCHHHHH
Q 004012 93 ELGI-NLPKDAFEFVFTFLQQNVINDGKFINNEFADVYLVTTLNPIP----LEAFTLQ--QTEVSAVKYIAYEEYK 161 (779)
Q Consensus 93 EtGl-~v~~~~l~~l~~~~~~~~~~~g~~~~~e~~~vf~~~~~~~~~----~~~i~~~--~~Ev~e~~Wv~~eEl~ 161 (779)
|+|+ .+...+ ++.+..+.+ + .+...++|.+++..+.. .....-. .-|+.+..-||+=.+.
T Consensus 81 Elg~~~V~~~~--y~~s~~~~y--p-----~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~ 147 (214)
T 3kvh_A 81 GLGCLRLTEAD--YLSSHLTEG--P-----HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQK 147 (214)
T ss_dssp CC---CCCGGG--EEEEEEC-----------CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCT
T ss_pred hhCCeeeeeee--eEEEEeccC--C-----CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEec
Confidence 9997 444333 333333221 1 13456788887643211 0001111 2588888888887664
No 78
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.26 E-value=2.5e-06 Score=91.97 Aligned_cols=91 Identities=12% Similarity=0.175 Sum_probs=59.5
Q ss_pred EEEEEEEEecCCCEEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHh-CCccCCCCeEEEEEEEeecccC
Q 004012 38 RTVNAWIFAESTQELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEEL-GINLPKDAFEFVFTFLQQNVIN 116 (779)
Q Consensus 38 r~v~v~V~~~~~gkVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEt-Gl~v~~~~l~~l~~~~~~~~~~ 116 (779)
.+|++++.+ +|+|||+ .+ .| |.+| ||.++.+++ ++|+||++||+ |+.+... ..++.|...
T Consensus 184 ~~vgaii~~--~g~vLL~--~~-----~G-W~LP-G~~~~~~~~--~~a~RE~~EEttGl~v~~~--~L~~v~~~~---- 244 (321)
T 3rh7_A 184 IRLGAVLEQ--QGAVFLA--GN-----ET-LSLP-NCTVEGGDP--ARTLAAYLEQLTGLNVTIG--FLYSVYEDK---- 244 (321)
T ss_dssp EEEEEEEES--SSCEEEB--CS-----SE-EBCC-EEEESSSCH--HHHHHHHHHHHHSSCEEEE--EEEEEEECT----
T ss_pred ceEEEEEEE--CCEEEEe--eC-----CC-ccCC-cccCCCChh--HHHHHHHHHHhcCCEEeec--eEEEEEEcC----
Confidence 457777765 6899999 21 48 9999 886655444 69999999997 9997532 222233211
Q ss_pred CCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHHHh
Q 004012 117 DGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEYKN 162 (779)
Q Consensus 117 ~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl~~ 162 (779)
. .+....+|.++..++ +..+++|+++++|..
T Consensus 245 ~----~~~~~i~f~~~~~~g-----------~~~e~~~f~~~elp~ 275 (321)
T 3rh7_A 245 S----DGRQNIVYHALASDG-----------APRQGRFLRPAELAA 275 (321)
T ss_dssp T----TCCEEEEEEEEECSS-----------CCSSSEEECHHHHTT
T ss_pred C----CceEEEEEEEEeCCC-----------CeeeeEEECHHHCCC
Confidence 1 112345677765432 237789999999943
No 79
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.26 E-value=5.2e-06 Score=82.83 Aligned_cols=116 Identities=15% Similarity=0.181 Sum_probs=71.6
Q ss_pred cCCceeEEEEEEEEecCCC--EEEEEEeCCCCCCCCCCeeccccccCCCCCCHHHHHHHHHHHHhCCccCC----CCeEE
Q 004012 32 RVGDYHRTVNAWIFAESTQ--ELLLQRRADFKDSWPGMWDISSAGHISAGDSSLISAQRELQEELGINLPK----DAFEF 105 (779)
Q Consensus 32 ~~g~~hr~v~v~V~~~~~g--kVLL~rRs~~k~~~pG~W~~PvGG~ve~GEt~~eAAlREl~EEtGl~v~~----~~l~~ 105 (779)
..|....+.++++++. .+ +|||.|+.. +.|.+| ||.+++||++.+|+.||+.||+|+.-.. +--..
T Consensus 54 ~~g~R~sV~avil~~~-~~~phVLLlq~~~------~~f~LP-GGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~ 125 (208)
T 3bho_A 54 KIGMRRTVEGVLIVHE-HRLPHVLLLQLGT------TFFKLP-GGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDC 125 (208)
T ss_dssp HHCSEEEEEEEEEEEE-TTEEEEEEEEEET------TEEECS-EEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEE
T ss_pred hhCCceEEEEEEEEcC-CCCcEEEEEEcCC------CcEECC-CcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhhe
Confidence 4666666777777663 44 699998753 589999 9999999999999999999999963111 11234
Q ss_pred EEEEEeeccc-------CCCcccceEEEEEEEEEEcCCCCCcCccCCccceeeEEEeCHHHH
Q 004012 106 VFTFLQQNVI-------NDGKFINNEFADVYLVTTLNPIPLEAFTLQQTEVSAVKYIAYEEY 160 (779)
Q Consensus 106 l~~~~~~~~~-------~~g~~~~~e~~~vf~~~~~~~~~~~~i~~~~~Ev~e~~Wv~~eEl 160 (779)
++.|...... +......+|+..+|.+.+..... +... .-..+.-+|+=||
T Consensus 126 lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~---f~vP--kn~kL~AvPLfel 182 (208)
T 3bho_A 126 IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKAL---FAVP--KNYKLVAAPLFEL 182 (208)
T ss_dssp EEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEE---EEEE--TTCEEEEEEHHHH
T ss_pred EEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccce---EecC--CCCeEEeecHHhh
Confidence 4554322100 11112246788999888754321 1211 2234445666666
No 80
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=68.11 E-value=1 Score=42.97 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=14.6
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
...+|+.||+||.+|-.+
T Consensus 110 ~~~~va~HEiGHaLGL~H 127 (159)
T 2ovx_A 110 SLFLVAAHQFGHALGLDH 127 (159)
T ss_dssp EHHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhhhhhhhcCCC
Confidence 345899999999999643
No 81
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=65.77 E-value=1.1 Score=43.00 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=14.6
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
...+|++||+||.+|-.+
T Consensus 114 ~~~~v~~HEiGHaLGL~H 131 (167)
T 2xs4_A 114 DLITVAAHEIGHLLGIEH 131 (167)
T ss_dssp EHHHHHHHHHHHHHTBCC
T ss_pred chhhhHHHHHHHhhcCCC
Confidence 446999999999999643
No 82
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=65.65 E-value=1.2 Score=42.79 Aligned_cols=18 Identities=22% Similarity=0.296 Sum_probs=14.8
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
...+|++||+||.+|-.+
T Consensus 110 ~~~~v~~HEiGHaLGL~H 127 (168)
T 1cge_A 110 NLHRVAAHELGHSLGLSH 127 (168)
T ss_dssp BHHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhHhHhhhcCCC
Confidence 346999999999999644
No 83
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=65.40 E-value=1.1 Score=42.49 Aligned_cols=18 Identities=22% Similarity=0.248 Sum_probs=14.9
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
....|++||+||.+|-.+
T Consensus 107 ~~~~v~~HEiGHaLGL~H 124 (160)
T 2jsd_A 107 NLFTVAAHEFGHALGLAH 124 (160)
T ss_dssp EHHHHHHHHHHHHHTCCC
T ss_pred hhHHHHHHHhHhhhcCCC
Confidence 356999999999999644
No 84
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=63.83 E-value=1.3 Score=42.90 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=14.7
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
...+|++||+||.+|-.+
T Consensus 112 ~~~~v~~HEiGHaLGL~H 129 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLGLFH 129 (173)
T ss_dssp EHHHHHHHHHHHHHTBCC
T ss_pred hhhhhHHHHHHHhhcCCC
Confidence 346999999999999643
No 85
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=61.33 E-value=1.7 Score=41.72 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=14.7
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
...+|+.||+||.+|-.+
T Consensus 112 ~~~~v~~HEiGHaLGL~H 129 (165)
T 1hv5_A 112 DLLQVAAHEFGHVLGLQH 129 (165)
T ss_dssp EHHHHHHHHHHHHTTCCC
T ss_pred hhhhhHHHHhHhhhCCCC
Confidence 456999999999999643
No 86
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=55.42 E-value=2.4 Score=43.74 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=14.8
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
...+|++||+||.+|-.+
T Consensus 194 ~l~~va~HEiGHaLGL~H 211 (255)
T 1slm_A 194 NLFLVAAHEIGHSLGLFH 211 (255)
T ss_dssp EHHHHHHHHHHHHTTCCC
T ss_pred eehhhhHHHHHHHhcCCC
Confidence 346999999999999643
No 87
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A* 2c6n_A* 2c6f_A*
Probab=54.49 E-value=12 Score=43.57 Aligned_cols=55 Identities=22% Similarity=0.156 Sum_probs=35.2
Q ss_pred hhhhhhhcccccCCCCcccCCCcccccchhhhhc-cchHHhHHHHHHHHHHH--HHHHhCCCCCh
Q 004012 595 THNICHECCHGIGPHSITLPDGRQSTVRLELQEL-HSAMEEAKADIVGLWAL--KFLIGRDLLPK 656 (779)
Q Consensus 595 ~~v~lHElgHg~G~~~~~~~~~~~~t~~~~~~~~-~s~~EE~rAd~~glyl~--~~l~~~g~~~~ 656 (779)
+.|+.||+||--+-.. . .+-+ -.|.+. ..+++|+=||+++|-+. ++|..+|+++.
T Consensus 356 ~~t~hHEmGH~qy~~~-y-~~~P-----~~~r~~anpgfhEAige~~slS~~Tp~hL~~igLl~~ 413 (629)
T 3nxq_A 356 LSTVHHEMGHIQYYLQ-Y-KDLP-----VSLRRGANPGFHEAIGDVLALSVSTPEHLHKIGLLDR 413 (629)
T ss_dssp HHHHHHHHHHHHHHHH-S-TTSC-----GGGCSCSSHHHHHHHHHHHHHHHTSHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHHHHHH-H-hcCC-----ccccCCCCchHHHHHHHHHHHHcCCHHHHHHcCCccc
Confidence 3577799999433200 0 0101 123333 46799999999999765 78989998654
No 88
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=52.43 E-value=2.6 Score=40.31 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=14.2
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
...|+.||+||.+|-.+
T Consensus 112 ~~~v~~HE~GHalGl~H 128 (163)
T 1i76_A 112 LFLVAAHEFGHSLGLAH 128 (163)
T ss_dssp HHHHHHHHHHHHHTBCC
T ss_pred hhhhhHHHhhhhhcCCC
Confidence 46999999999999633
No 89
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=50.84 E-value=3.2 Score=39.92 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=13.6
Q ss_pred hhhhhhhhcccccCCC
Q 004012 594 FTHNICHECCHGIGPH 609 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~ 609 (779)
..+|++||+||.+|-.
T Consensus 114 ~~~~~~HE~gH~lGl~ 129 (167)
T 3ayu_A 114 LFLVAAHAFGHAMGLE 129 (167)
T ss_dssp HHHHHHHHHHHHTTEE
T ss_pred ceeehhhhhHHhccCC
Confidence 4589999999999953
No 90
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=48.70 E-value=3.6 Score=39.18 Aligned_cols=17 Identities=24% Similarity=0.259 Sum_probs=14.2
Q ss_pred chhhhhhhhcccccCCC
Q 004012 593 FFTHNICHECCHGIGPH 609 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~ 609 (779)
....|+.||+||.+|-.
T Consensus 107 ~~~~~~~HE~GH~lGl~ 123 (159)
T 1y93_A 107 NLFLTAVHEIGHSLGLG 123 (159)
T ss_dssp EHHHHHHHHHHHHTTCC
T ss_pred hhhhhhhhhhhhhhcCC
Confidence 35689999999999963
No 91
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=43.13 E-value=5.7 Score=43.49 Aligned_cols=17 Identities=29% Similarity=0.552 Sum_probs=14.5
Q ss_pred cchhhhhhhhcccccCC
Q 004012 592 SFFTHNICHECCHGIGP 608 (779)
Q Consensus 592 ~~~~~v~lHElgHg~G~ 608 (779)
..+.+|+.||+||+.|+
T Consensus 285 ~~~~~V~vHE~GHsfgg 301 (407)
T 3p1v_A 285 PMFKPVVVHEFGHSFGG 301 (407)
T ss_dssp TTHHHHHHHHHHHHTTC
T ss_pred ccccceeeeeccccccc
Confidence 34568999999999999
No 92
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=43.12 E-value=4.4 Score=39.14 Aligned_cols=17 Identities=29% Similarity=0.333 Sum_probs=14.1
Q ss_pred chhhhhhhhcccccCCC
Q 004012 593 FFTHNICHECCHGIGPH 609 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~ 609 (779)
...+|+.||+||.+|-.
T Consensus 114 ~~~~~~~HE~gH~lGl~ 130 (174)
T 2y6d_A 114 NFLYAATHELGHSLGMG 130 (174)
T ss_dssp EHHHHHHHHHHHHHTBC
T ss_pred eeeehhhHHhHhhhcCC
Confidence 34689999999999963
No 93
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=42.08 E-value=5.4 Score=39.30 Aligned_cols=15 Identities=27% Similarity=0.479 Sum_probs=13.2
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 136 ~a~~~AHElGH~lG~ 150 (202)
T 2w15_A 136 VAVTMAHELGHNLGI 150 (202)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhhcCC
Confidence 468999999999996
No 94
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=41.99 E-value=5.2 Score=38.50 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=14.1
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
...|+.||+||.+|-.+
T Consensus 113 l~~v~~hE~Gh~lGl~h 129 (168)
T 830c_A 113 LFLVAAHEFGHSLGLDH 129 (168)
T ss_dssp HHHHHHHHHHHHTTBCC
T ss_pred hhhhhhhhhcchhcCCC
Confidence 45899999999999643
No 95
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=41.78 E-value=4.9 Score=38.50 Aligned_cols=18 Identities=22% Similarity=0.193 Sum_probs=14.6
Q ss_pred chhhhhhhhcccccCCCC
Q 004012 593 FFTHNICHECCHGIGPHS 610 (779)
Q Consensus 593 ~~~~v~lHElgHg~G~~~ 610 (779)
....|+.||+||.+|-.+
T Consensus 116 ~~~~~~~he~gh~lgl~h 133 (169)
T 1rm8_A 116 DLFLVAVHELGHALGLEH 133 (169)
T ss_dssp EHHHHHHHHHHHHHTCCC
T ss_pred eeeeehhhhhhhhcCCCC
Confidence 346899999999999643
No 96
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=40.37 E-value=5.3 Score=44.90 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=13.8
Q ss_pred hhhhhhhcccccCCCC
Q 004012 595 THNICHECCHGIGPHS 610 (779)
Q Consensus 595 ~~v~lHElgHg~G~~~ 610 (779)
.+|++||+||.+|-.|
T Consensus 171 ~~va~HEiGHaLGL~H 186 (471)
T 1sat_A 171 RQTFTHEIGHALGLSH 186 (471)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ceeeeeeccccccCCC
Confidence 5899999999999644
No 97
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=40.35 E-value=5.9 Score=39.08 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=13.2
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 138 ~a~~~AHElGH~lG~ 152 (203)
T 1kuf_A 138 VAVTMTHELGHNLGM 152 (203)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hHHHHHHHhhhhcCC
Confidence 458899999999996
No 98
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=40.14 E-value=5.3 Score=44.96 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=14.4
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
..+|++||+||.+|-.|
T Consensus 179 ~~~va~HEIGHaLGL~H 195 (479)
T 1kap_P 179 GRQTLTHEIGHTLGLSH 195 (479)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred cceeehhhhhhhhccCC
Confidence 35999999999999654
No 99
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=39.07 E-value=6.4 Score=40.24 Aligned_cols=15 Identities=27% Similarity=0.288 Sum_probs=13.1
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 182 ~a~~~AHElGHnlG~ 196 (257)
T 2ddf_A 182 ADLVTTHELGHNFGA 196 (257)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred eeeeeeeehhhhcCc
Confidence 457899999999996
No 100
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=38.75 E-value=6.5 Score=38.53 Aligned_cols=15 Identities=27% Similarity=0.567 Sum_probs=13.1
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 133 ~a~~~AHElGH~lG~ 147 (197)
T 1bud_A 133 VAITLAHEMAHNLGV 147 (197)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhhcCC
Confidence 357899999999996
No 101
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=38.70 E-value=6.5 Score=38.52 Aligned_cols=15 Identities=27% Similarity=0.516 Sum_probs=13.0
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 135 ~a~~~AHElGH~lG~ 149 (197)
T 1qua_A 135 MAVTMAHELGHNLGM 149 (197)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 357899999999996
No 102
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=38.64 E-value=5.8 Score=44.46 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=14.4
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
..+|++||+||.+|-.|
T Consensus 163 ~~~va~HEiGHaLGL~H 179 (463)
T 1g9k_A 163 GRQTLTHEIGHTLGLSH 179 (463)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred chhhhhhhhhhhhccCC
Confidence 35999999999999654
No 103
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=38.05 E-value=6.8 Score=38.59 Aligned_cols=14 Identities=29% Similarity=0.475 Sum_probs=12.5
Q ss_pred hhhhhhhcccccCC
Q 004012 595 THNICHECCHGIGP 608 (779)
Q Consensus 595 ~~v~lHElgHg~G~ 608 (779)
..|++|||||..|-
T Consensus 137 a~~~AHElGHnlG~ 150 (202)
T 1atl_A 137 GVTMAHELGHNLGM 150 (202)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred EEEehhhhccccCc
Confidence 46899999999996
No 104
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=37.99 E-value=6.8 Score=38.58 Aligned_cols=14 Identities=29% Similarity=0.451 Sum_probs=12.6
Q ss_pred hhhhhhhcccccCC
Q 004012 595 THNICHECCHGIGP 608 (779)
Q Consensus 595 ~~v~lHElgHg~G~ 608 (779)
..|++|||||.+|-
T Consensus 136 a~~~AHElGH~lG~ 149 (202)
T 1yp1_A 136 AVVMAHELGHNLGM 149 (202)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 57899999999996
No 105
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=37.97 E-value=6.8 Score=38.97 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=13.1
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 141 ~a~~~AHElGHnlG~ 155 (217)
T 3b8z_A 141 AAFTVAHEIGHLLGL 155 (217)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhhhhHhhhhhhcCC
Confidence 357999999999996
No 106
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=37.39 E-value=6.3 Score=44.39 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=13.9
Q ss_pred hhhhhhhcccccCCCC
Q 004012 595 THNICHECCHGIGPHS 610 (779)
Q Consensus 595 ~~v~lHElgHg~G~~~ 610 (779)
.+|++||+||.+|-.|
T Consensus 183 ~~va~HEiGHaLGL~H 198 (479)
T 1k7i_A 183 RQTFTHEIGHALGLAH 198 (479)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred ccccHHHHHHhhcCCC
Confidence 5899999999999644
No 107
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=36.86 E-value=7 Score=38.09 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=14.0
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
...|+.||+||.+|-.+
T Consensus 122 l~~v~~hE~Gh~lGl~h 138 (181)
T 3ma2_D 122 IFLVAVHELGHALGLEH 138 (181)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred eeeeehhhccccccCCc
Confidence 45899999999999643
No 108
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=36.37 E-value=7.4 Score=38.50 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=12.4
Q ss_pred hhhhhhhcccccCC
Q 004012 595 THNICHECCHGIGP 608 (779)
Q Consensus 595 ~~v~lHElgHg~G~ 608 (779)
..|++||+||.+|-
T Consensus 134 a~~~AHElGH~lG~ 147 (208)
T 4dd8_A 134 ACTMAHEMGHNLGM 147 (208)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 47899999999995
No 109
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=34.09 E-value=8.5 Score=40.30 Aligned_cols=15 Identities=20% Similarity=0.144 Sum_probs=13.2
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
.+.|++|||||.+|-
T Consensus 143 ~a~t~AHElGHnlG~ 157 (300)
T 2v4b_A 143 AAFTTAHELGHVFNM 157 (300)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred ceehhhhhhhhhcCC
Confidence 458999999999996
No 110
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=33.95 E-value=8.4 Score=42.59 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.0
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
..+|+.||+||.+|-.+
T Consensus 376 l~~Va~HE~GHaLGL~H 392 (425)
T 1l6j_A 376 LFLVAAHEFGHALGLDH 392 (425)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhhhhhcccCc
Confidence 35899999999999643
No 111
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=32.74 E-value=9.3 Score=40.37 Aligned_cols=15 Identities=13% Similarity=0.087 Sum_probs=13.3
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
.+.|++|||||.+|-
T Consensus 143 ~a~t~AHElGHnlGm 157 (316)
T 2rjp_A 143 SAFTAAHQLGHVFNM 157 (316)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcCc
Confidence 458999999999996
No 112
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=32.55 E-value=9.4 Score=37.94 Aligned_cols=15 Identities=27% Similarity=0.468 Sum_probs=13.2
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 136 ~a~~~AHElGHnlG~ 150 (214)
T 1r55_A 136 AAATMAHEIGHSLGL 150 (214)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 368999999999996
No 113
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=32.10 E-value=9.6 Score=39.64 Aligned_cols=15 Identities=27% Similarity=0.288 Sum_probs=13.2
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
...|++|||||.+|-
T Consensus 188 ~a~~~AHElGHnlGm 202 (288)
T 2i47_A 188 ADLVTTHELGHNFGA 202 (288)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcCC
Confidence 457899999999996
No 114
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=30.89 E-value=9.2 Score=35.38 Aligned_cols=14 Identities=36% Similarity=0.423 Sum_probs=12.4
Q ss_pred hhhhhhhcccccCC
Q 004012 595 THNICHECCHGIGP 608 (779)
Q Consensus 595 ~~v~lHElgHg~G~ 608 (779)
..|..||+||-+|-
T Consensus 78 ~~v~aHE~GH~LGL 91 (132)
T 1c7k_A 78 TRVTAHETGHVLGL 91 (132)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred ceEEeeeehhccCC
Confidence 47899999999996
No 115
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=30.48 E-value=11 Score=40.94 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=13.2
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
.+.|++|||||.+|-
T Consensus 143 ~a~~~AHElGHnlGm 157 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGL 157 (378)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhhhhhhhhhhhcCc
Confidence 458999999999996
No 116
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=28.23 E-value=11 Score=40.81 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.1
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
..+|++||+||.+|-.+
T Consensus 107 ~~~~~~HE~gH~lGl~h 123 (365)
T 3ba0_A 107 LFLTAVHEIGHSLGLGH 123 (365)
T ss_dssp SSHHHHHHHHHHHTCCC
T ss_pred ceeehhhhhhhhhcCCC
Confidence 46899999999999643
No 117
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=27.55 E-value=13 Score=41.13 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=14.0
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
..+|+.||+||.+|-.+
T Consensus 366 l~~va~HE~GHaLGL~H 382 (421)
T 1eak_A 366 LFLVAAHQFGHAMGLEH 382 (421)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred chhhhhhhhhhccCCCC
Confidence 35899999999999643
No 118
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=26.95 E-value=12 Score=36.95 Aligned_cols=17 Identities=24% Similarity=0.299 Sum_probs=14.2
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
...|++||+||.+|-.+
T Consensus 93 ~~g~i~HEl~HaLGf~H 109 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYH 109 (199)
T ss_dssp SHHHHHHHHHHHHTCCC
T ss_pred ccchHHHHHHHHhccce
Confidence 35899999999999754
No 119
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=26.92 E-value=13 Score=40.64 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=13.0
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
++.|++|||||.+|-
T Consensus 139 ~a~t~AHElGHnlGm 153 (397)
T 3k7n_A 139 VASTITHELGHNLGI 153 (397)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhhhHHHHHHHHcCC
Confidence 458899999999996
No 120
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=26.42 E-value=15 Score=40.53 Aligned_cols=15 Identities=27% Similarity=0.405 Sum_probs=12.9
Q ss_pred hhhhhhhcccccCCC
Q 004012 595 THNICHECCHGIGPH 609 (779)
Q Consensus 595 ~~v~lHElgHg~G~~ 609 (779)
..|++|||||.+|-.
T Consensus 140 a~t~AHElGHnlGm~ 154 (427)
T 2e3x_A 140 AVIMAHELSHNLGMY 154 (427)
T ss_dssp HHHHHHHHHHTTTCC
T ss_pred eeehHHHHHHhhCCc
Confidence 478999999999963
No 121
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=26.21 E-value=13 Score=36.78 Aligned_cols=18 Identities=22% Similarity=0.084 Sum_probs=14.5
Q ss_pred hhhhhhhhcccccCCCCc
Q 004012 594 FTHNICHECCHGIGPHSI 611 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~~ 611 (779)
...|++|||||.+|-.+.
T Consensus 87 ~~g~i~HEl~HalGf~HE 104 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHE 104 (201)
T ss_dssp SHHHHHHHHHHHHTBCCG
T ss_pred ccchhHHHHHHHhcchhh
Confidence 357999999999997543
No 122
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=25.74 E-value=14 Score=40.71 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=13.1
Q ss_pred hhhhhhhhcccccCC
Q 004012 594 FTHNICHECCHGIGP 608 (779)
Q Consensus 594 ~~~v~lHElgHg~G~ 608 (779)
++.|++|||||.+|-
T Consensus 144 ~a~t~AHElGHnlGm 158 (422)
T 3k7l_A 144 VAITMAHEMGHNLGM 158 (422)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHcCC
Confidence 458899999999996
No 123
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=25.69 E-value=15 Score=40.71 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.0
Q ss_pred hhhhhhhcccccCCC
Q 004012 595 THNICHECCHGIGPH 609 (779)
Q Consensus 595 ~~v~lHElgHg~G~~ 609 (779)
..|++|||||.+|-.
T Consensus 147 a~t~AHElGHnlG~~ 161 (427)
T 2ero_A 147 AIAMAHEMGHNLGMD 161 (427)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCc
Confidence 478999999999963
No 124
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=24.85 E-value=15 Score=40.42 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.9
Q ss_pred hhhhhhhcccccCCC
Q 004012 595 THNICHECCHGIGPH 609 (779)
Q Consensus 595 ~~v~lHElgHg~G~~ 609 (779)
..|++|||||.+|-.
T Consensus 138 a~t~AHElGHnlG~~ 152 (419)
T 2dw0_A 138 AVIMAHEMGHNLGIN 152 (419)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHHcCCc
Confidence 578999999999963
No 125
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=24.78 E-value=15 Score=35.22 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=13.3
Q ss_pred hhhhhhhhcccccCCC
Q 004012 594 FTHNICHECCHGIGPH 609 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~ 609 (779)
...++.||+||-.|-.
T Consensus 114 ~~k~~~HElGH~lGL~ 129 (163)
T 4axq_A 114 VVKEAVHEIGHVLGLK 129 (163)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 4578999999999963
No 126
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=24.31 E-value=16 Score=37.79 Aligned_cols=19 Identities=21% Similarity=0.053 Sum_probs=15.0
Q ss_pred hhhhhhhhcccccCCCCcc
Q 004012 594 FTHNICHECCHGIGPHSIT 612 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~~~ 612 (779)
...|+.||+||-+|=.++.
T Consensus 162 ~g~TltHEvGH~LGL~HtF 180 (262)
T 2cki_A 162 KGRTATHEIGHWLNLYHIW 180 (262)
T ss_dssp SSHHHHHHHHHHTTCCCTT
T ss_pred ccchhhhhhhhhhcceeec
Confidence 3589999999999965543
No 127
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=23.56 E-value=16 Score=40.60 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.2
Q ss_pred hhhhhhhhcccccCCCC
Q 004012 594 FTHNICHECCHGIGPHS 610 (779)
Q Consensus 594 ~~~v~lHElgHg~G~~~ 610 (779)
..+|++||+||.+|-.+
T Consensus 193 l~~v~~HE~GH~lGl~H 209 (450)
T 1su3_A 193 LHRVAAHELGHSLGLSH 209 (450)
T ss_dssp HHHHHHHHHHHHTTCCC
T ss_pred hhchhhhHHHHhccCCC
Confidence 46999999999999643
No 128
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=23.31 E-value=41 Score=38.66 Aligned_cols=52 Identities=27% Similarity=0.192 Sum_probs=31.6
Q ss_pred hhhhhcccccCCCCcccCCCcccccchhhhhc-cchHHhHHHHHHHHHHH--HHHHhCCCCC
Q 004012 597 NICHECCHGIGPHSITLPDGRQSTVRLELQEL-HSAMEEAKADIVGLWAL--KFLIGRDLLP 655 (779)
Q Consensus 597 v~lHElgHg~G~~~~~~~~~~~~t~~~~~~~~-~s~~EE~rAd~~glyl~--~~l~~~g~~~ 655 (779)
|++||+||+..- +.- .++.+ .+..- ...+.|+-.++.|+... ++|..+|++.
T Consensus 344 tl~HE~GHa~y~---~~~--~~~p~--~~~~g~~~~fhEa~s~~~~~s~~~~~~l~~~~ll~ 398 (589)
T 1uze_A 344 VAHHEMGHIQYF---MQY--KDLPV--ALREGANPGFHEAIGDVLALSVSTPKHLHSLNLLS 398 (589)
T ss_dssp HHHHHHHHHHHH---HHT--TTSCG--GGCSCSSHHHHHHHHHHHHHHHTSHHHHHHTTSCC
T ss_pred HHHHHHHHHHHH---HHH--ccCCh--hhhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Confidence 889999999763 210 11111 11122 34778887788888775 5666777764
No 129
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=21.28 E-value=15 Score=37.22 Aligned_cols=16 Identities=31% Similarity=0.330 Sum_probs=13.7
Q ss_pred hhhhhhhcccccCCCC
Q 004012 595 THNICHECCHGIGPHS 610 (779)
Q Consensus 595 ~~v~lHElgHg~G~~~ 610 (779)
..|++||+||.+|-.+
T Consensus 121 ~g~i~HEl~HaLGf~H 136 (235)
T 3lq0_A 121 HGTILHALMHAIGFYH 136 (235)
T ss_dssp HHHHHHHHHHHHHBCC
T ss_pred cchHHHHHHHHhccce
Confidence 5899999999999754
Done!