Query 004014
Match_columns 779
No_of_seqs 432 out of 2562
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 11:27:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 99.8 8.5E-22 2.9E-26 213.3 3.8 165 64-267 27-191 (329)
2 2l6l_A DNAJ homolog subfamily 99.8 3.6E-20 1.2E-24 180.0 6.0 130 63-261 8-146 (155)
3 1hdj_A Human HSP40, HDJ-1; mol 99.7 2.4E-18 8.2E-23 148.2 8.3 71 64-134 2-72 (77)
4 2ctr_A DNAJ homolog subfamily 99.7 2.6E-18 9E-23 151.9 6.6 72 63-134 5-76 (88)
5 2ctp_A DNAJ homolog subfamily 99.7 3.7E-18 1.3E-22 147.4 7.1 71 63-133 5-75 (78)
6 2cug_A Mkiaa0962 protein; DNAJ 99.7 7.9E-18 2.7E-22 148.9 7.8 70 63-132 15-84 (88)
7 2dn9_A DNAJ homolog subfamily 99.7 1E-17 3.4E-22 144.9 8.2 71 63-133 5-76 (79)
8 2ej7_A HCG3 gene; HCG3 protein 99.7 1.1E-17 3.7E-22 145.7 7.6 73 62-134 6-80 (82)
9 2dmx_A DNAJ homolog subfamily 99.7 1.3E-17 4.4E-22 148.5 8.0 72 63-134 7-80 (92)
10 2och_A Hypothetical protein DN 99.7 1.6E-17 5.4E-22 141.8 7.7 69 61-131 4-72 (73)
11 2o37_A Protein SIS1; HSP40, J- 99.7 7E-18 2.4E-22 150.4 5.7 71 62-134 5-75 (92)
12 1bq0_A DNAJ, HSP40; chaperone, 99.7 7.9E-18 2.7E-22 153.0 5.9 71 64-134 2-73 (103)
13 1wjz_A 1700030A21RIK protein; 99.7 1.6E-17 5.6E-22 148.1 6.1 70 63-132 14-90 (94)
14 2yua_A Williams-beuren syndrom 99.7 1.5E-17 5.1E-22 150.3 5.6 70 63-132 15-85 (99)
15 2ctq_A DNAJ homolog subfamily 99.7 2.2E-17 7.4E-22 152.5 6.3 72 63-134 18-90 (112)
16 2lgw_A DNAJ homolog subfamily 99.7 2.6E-17 8.8E-22 149.0 6.2 70 65-134 2-73 (99)
17 2ctw_A DNAJ homolog subfamily 99.6 1.2E-16 4.1E-21 146.9 6.7 72 63-134 15-87 (109)
18 2ys8_A RAB-related GTP-binding 99.6 2.1E-16 7.3E-21 140.4 6.3 62 63-124 25-86 (90)
19 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 1.6E-16 5.5E-21 145.8 4.5 70 62-131 12-86 (109)
20 3apq_A DNAJ homolog subfamily 99.6 9.4E-16 3.2E-20 153.7 6.8 70 65-134 2-72 (210)
21 1gh6_A Large T antigen; tumor 99.5 1.5E-15 5.1E-20 140.9 3.9 65 65-132 8-74 (114)
22 3ag7_A Putative uncharacterize 99.5 1.2E-15 4.1E-20 139.8 2.4 85 30-121 11-104 (106)
23 3hho_A CO-chaperone protein HS 99.5 6.6E-15 2.3E-19 146.0 5.9 68 64-131 3-78 (174)
24 2pf4_E Small T antigen; PP2A, 99.5 3.6E-15 1.2E-19 147.6 2.5 64 65-131 11-76 (174)
25 1fpo_A HSC20, chaperone protei 99.5 1E-14 3.6E-19 144.2 5.7 67 65-131 1-75 (171)
26 1n4c_A Auxilin; four helix bun 99.5 2.4E-14 8.3E-19 142.6 7.4 62 65-126 117-182 (182)
27 2qwo_B Putative tyrosine-prote 99.5 4.9E-15 1.7E-19 132.4 2.2 71 43-119 17-91 (92)
28 1faf_A Large T antigen; J doma 99.5 1.4E-14 4.6E-19 126.0 4.9 63 65-131 11-75 (79)
29 3bvo_A CO-chaperone protein HS 99.5 3.6E-14 1.2E-18 144.4 5.9 69 63-131 41-117 (207)
30 1iur_A KIAA0730 protein; DNAJ 99.4 1.6E-14 5.3E-19 128.2 2.4 60 64-123 15-76 (88)
31 3uo3_A J-type CO-chaperone JAC 99.4 1.3E-13 4.5E-18 137.5 5.3 67 62-130 8-81 (181)
32 2guz_A Mitochondrial import in 99.4 1.8E-13 6.2E-18 116.4 3.7 56 65-123 14-70 (71)
33 2y4t_A DNAJ homolog subfamily 99.3 2.7E-12 9.4E-17 137.5 10.9 116 10-129 331-450 (450)
34 3apo_A DNAJ homolog subfamily 99.3 2.9E-13 9.9E-18 160.5 2.0 73 62-134 18-91 (780)
35 2guz_B Mitochondrial import in 98.3 6.8E-07 2.3E-11 74.9 4.8 51 67-120 6-59 (65)
36 2pzi_A Probable serine/threoni 96.6 0.0039 1.3E-07 72.8 9.1 102 8-116 534-675 (681)
37 3agx_A DNAJ homolog subfamily 93.7 0.015 5.2E-07 57.5 0.9 44 217-267 3-53 (181)
38 4gcn_A Protein STI-1; structur 87.9 1.5 5E-05 39.1 7.9 41 5-45 5-45 (127)
39 1nlt_A Protein YDJ1, mitochond 87.4 0.14 5E-06 52.9 0.9 38 215-257 10-47 (248)
40 2ctt_A DNAJ homolog subfamily 87.3 0.17 5.9E-06 45.3 1.3 35 218-257 3-37 (104)
41 3upv_A Heat shock protein STI1 86.1 1.1 3.9E-05 38.8 5.9 45 6-50 2-46 (126)
42 2l6j_A TPR repeat-containing p 83.3 3.5 0.00012 34.1 7.5 39 7-45 3-41 (111)
43 2q2g_A HSP40 protein, heat sho 83.1 0.27 9.4E-06 48.4 0.5 48 216-268 3-53 (180)
44 4gco_A Protein STI-1; structur 79.5 4.8 0.00017 35.7 7.5 48 3-50 8-55 (126)
45 3sz7_A HSC70 cochaperone (SGT) 78.8 24 0.00084 31.7 12.2 47 4-50 7-53 (164)
46 2fbn_A 70 kDa peptidylprolyl i 75.0 9 0.00031 35.9 8.3 37 6-42 36-72 (198)
47 4ga2_A E3 SUMO-protein ligase 72.3 5.8 0.0002 36.1 6.0 50 3-52 26-75 (150)
48 1c3g_A Heat shock protein 40; 71.9 1 3.4E-05 43.9 0.7 45 218-267 2-46 (170)
49 3q49_B STIP1 homology and U bo 70.9 42 0.0014 28.6 11.1 45 6-50 7-51 (137)
50 2kc7_A BFR218_protein; tetratr 67.6 12 0.0004 30.6 6.5 39 11-49 3-42 (99)
51 1ihg_A Cyclophilin 40; ppiase 66.6 14 0.00049 39.4 8.5 35 6-40 221-255 (370)
52 2xcb_A PCRH, regulatory protei 66.4 17 0.00059 32.1 7.8 49 2-50 12-60 (142)
53 1elw_A TPR1-domain of HOP; HOP 66.2 16 0.00054 29.7 7.1 40 6-45 2-41 (118)
54 1kt0_A FKBP51, 51 kDa FK506-bi 65.6 9.3 0.00032 41.9 7.0 36 6-41 266-301 (457)
55 3rkv_A Putative peptidylprolyl 62.7 19 0.00067 32.3 7.5 68 7-76 62-129 (162)
56 3sz7_A HSC70 cochaperone (SGT) 62.5 9.3 0.00032 34.6 5.3 39 9-47 46-84 (164)
57 4gco_A Protein STI-1; structur 62.4 16 0.00056 32.2 6.8 77 8-88 47-123 (126)
58 1p5q_A FKBP52, FK506-binding p 62.0 19 0.00066 37.5 8.3 36 6-41 145-180 (336)
59 1na3_A Designed protein CTPR2; 62.0 24 0.00081 27.7 7.1 39 6-44 7-45 (91)
60 1elr_A TPR2A-domain of HOP; HO 62.0 27 0.00092 28.9 7.8 40 6-45 2-41 (131)
61 3gyz_A Chaperone protein IPGC; 61.6 23 0.00077 32.9 7.9 50 2-51 30-79 (151)
62 3vtx_A MAMA; tetratricopeptide 61.0 13 0.00045 33.9 6.1 43 8-50 5-47 (184)
63 3ma5_A Tetratricopeptide repea 60.9 11 0.00039 31.6 5.2 44 7-50 6-49 (100)
64 1na3_A Designed protein CTPR2; 60.8 29 0.00099 27.2 7.5 41 10-50 45-85 (91)
65 3rkv_A Putative peptidylprolyl 57.6 19 0.00064 32.4 6.5 32 6-37 9-40 (162)
66 2hr2_A Hypothetical protein; a 57.2 8.8 0.0003 37.0 4.2 36 5-40 8-43 (159)
67 1a17_A Serine/threonine protei 55.3 28 0.00096 30.5 7.1 45 5-49 10-54 (166)
68 3k9i_A BH0479 protein; putativ 55.2 34 0.0012 29.0 7.4 47 5-51 24-70 (117)
69 2vgx_A Chaperone SYCD; alterna 54.1 37 0.0013 30.7 7.8 47 3-49 16-62 (148)
70 2vyi_A SGTA protein; chaperone 53.4 39 0.0013 27.7 7.4 43 4-46 8-50 (131)
71 3uq3_A Heat shock protein STI1 52.9 10 0.00036 35.8 4.0 34 5-38 2-35 (258)
72 2dba_A Smooth muscle cell asso 51.4 33 0.0011 29.3 6.8 42 8-49 65-106 (148)
73 1hxi_A PEX5, peroxisome target 51.2 27 0.00093 30.4 6.2 91 10-128 19-110 (121)
74 2kat_A Uncharacterized protein 50.5 47 0.0016 27.8 7.5 42 8-49 19-60 (115)
75 3upv_A Heat shock protein STI1 49.9 31 0.0011 29.3 6.3 45 8-52 38-82 (126)
76 1elw_A TPR1-domain of HOP; HOP 49.5 41 0.0014 27.1 6.8 43 8-50 38-80 (118)
77 2c2l_A CHIP, carboxy terminus 49.5 1.1E+02 0.0036 30.7 11.2 42 8-49 4-45 (281)
78 2l6j_A TPR repeat-containing p 49.4 48 0.0016 26.9 7.2 33 9-41 39-71 (111)
79 2fbn_A 70 kDa peptidylprolyl i 49.4 44 0.0015 31.0 7.8 40 9-48 89-128 (198)
80 1hh8_A P67PHOX, NCF-2, neutrop 49.2 27 0.00091 32.4 6.2 43 8-50 37-79 (213)
81 2vgx_A Chaperone SYCD; alterna 48.4 27 0.00091 31.6 5.9 43 8-50 55-97 (148)
82 2lni_A Stress-induced-phosphop 48.4 33 0.0011 28.6 6.1 38 7-44 15-52 (133)
83 1hxi_A PEX5, peroxisome target 47.6 52 0.0018 28.5 7.5 41 10-50 53-93 (121)
84 2kc7_A BFR218_protein; tetratr 47.2 53 0.0018 26.5 7.1 36 10-45 37-72 (99)
85 2vyi_A SGTA protein; chaperone 46.4 60 0.002 26.6 7.4 42 8-49 46-87 (131)
86 2kck_A TPR repeat; tetratricop 46.3 50 0.0017 26.4 6.8 35 11-45 9-43 (112)
87 2xcb_A PCRH, regulatory protei 46.3 27 0.00094 30.8 5.5 44 8-51 52-95 (142)
88 2xev_A YBGF; tetratricopeptide 46.2 55 0.0019 27.4 7.3 33 9-41 40-72 (129)
89 2kck_A TPR repeat; tetratricop 45.7 1.1E+02 0.0038 24.2 9.2 30 11-40 43-72 (112)
90 1a17_A Serine/threonine protei 45.5 68 0.0023 27.8 8.0 43 8-50 47-89 (166)
91 2dba_A Smooth muscle cell asso 45.2 48 0.0016 28.2 6.8 36 6-41 26-61 (148)
92 2v5f_A Prolyl 4-hydroxylase su 45.2 67 0.0023 27.3 7.7 44 12-55 50-93 (104)
93 2lni_A Stress-induced-phosphop 44.4 51 0.0017 27.4 6.7 43 8-50 50-92 (133)
94 1na0_A Designed protein CTPR3; 44.3 58 0.002 26.4 7.0 38 8-45 43-80 (125)
95 1wao_1 Serine/threonine protei 43.7 1.9E+02 0.0067 31.6 13.0 39 13-51 79-117 (477)
96 1ihg_A Cyclophilin 40; ppiase 42.9 36 0.0012 36.2 6.7 44 6-49 271-314 (370)
97 2gw1_A Mitochondrial precursor 42.8 32 0.0011 36.3 6.2 37 5-41 3-39 (514)
98 3qky_A Outer membrane assembly 40.6 1.2E+02 0.0042 29.2 9.7 33 10-42 150-182 (261)
99 1na0_A Designed protein CTPR3; 40.5 72 0.0025 25.8 7.0 37 8-44 9-45 (125)
100 3q49_B STIP1 homology and U bo 40.1 77 0.0026 26.8 7.3 40 10-49 45-84 (137)
101 3ieg_A DNAJ homolog subfamily 39.9 67 0.0023 31.6 7.8 77 11-89 275-353 (359)
102 1elr_A TPR2A-domain of HOP; HO 39.5 89 0.0031 25.5 7.5 45 8-53 79-123 (131)
103 2if4_A ATFKBP42; FKBP-like, al 38.3 16 0.00055 38.2 3.0 39 11-49 233-271 (338)
104 3urz_A Uncharacterized protein 38.1 62 0.0021 30.6 6.9 28 14-41 60-87 (208)
105 3qou_A Protein YBBN; thioredox 36.5 67 0.0023 32.2 7.3 44 8-51 117-160 (287)
106 2xev_A YBGF; tetratricopeptide 36.4 82 0.0028 26.3 6.8 32 11-42 5-36 (129)
107 3gyz_A Chaperone protein IPGC; 36.0 61 0.0021 29.9 6.3 42 9-50 71-112 (151)
108 3ax2_A Mitochondrial import re 36.0 68 0.0023 27.1 5.8 36 11-46 20-55 (73)
109 3k9i_A BH0479 protein; putativ 35.6 64 0.0022 27.2 6.0 41 12-52 65-105 (117)
110 2e2e_A Formate-dependent nitri 34.9 61 0.0021 29.2 6.1 43 9-51 79-124 (177)
111 2r5s_A Uncharacterized protein 34.6 14 0.00048 34.0 1.6 48 4-51 2-49 (176)
112 1p5q_A FKBP52, FK506-binding p 34.2 77 0.0026 32.8 7.4 42 8-49 196-237 (336)
113 3ieg_A DNAJ homolog subfamily 33.9 92 0.0031 30.6 7.7 43 7-49 2-44 (359)
114 4ga2_A E3 SUMO-protein ligase 33.2 87 0.003 28.0 6.8 37 9-45 66-102 (150)
115 4gcn_A Protein STI-1; structur 33.1 90 0.0031 27.1 6.7 33 12-44 87-119 (127)
116 1pc2_A Mitochondria fission pr 33.0 1.3E+02 0.0043 28.7 8.0 49 9-57 72-120 (152)
117 2v5f_A Prolyl 4-hydroxylase su 32.4 82 0.0028 26.7 6.1 31 8-38 5-35 (104)
118 4gyw_A UDP-N-acetylglucosamine 31.6 2.4E+02 0.0081 33.1 11.8 117 7-130 8-138 (723)
119 2vq2_A PILW, putative fimbrial 31.1 92 0.0031 28.3 6.7 42 4-45 4-45 (225)
120 3urz_A Uncharacterized protein 30.9 1.4E+02 0.0048 28.1 8.1 42 11-52 91-132 (208)
121 3vtx_A MAMA; tetratricopeptide 30.9 83 0.0028 28.3 6.3 35 11-45 76-110 (184)
122 1hh8_A P67PHOX, NCF-2, neutrop 30.9 3E+02 0.01 24.9 11.6 34 6-41 4-37 (213)
123 1orj_A Flagellar protein FLIS; 30.7 49 0.0017 30.8 4.6 33 6-38 27-63 (130)
124 1fch_A Peroxisomal targeting s 29.5 2.9E+02 0.01 27.3 10.7 115 8-123 217-349 (368)
125 1om2_A Protein (mitochondrial 28.9 74 0.0025 28.2 5.2 36 10-45 22-57 (95)
126 2yhc_A BAMD, UPF0169 lipoprote 28.4 73 0.0025 30.4 5.7 33 12-44 151-183 (225)
127 2js4_A UPF0434 protein BB2007; 28.1 17 0.00059 30.5 0.9 29 230-260 10-38 (70)
128 1zu2_A Mitochondrial import re 28.1 71 0.0024 30.6 5.3 31 22-52 105-135 (158)
129 2jr6_A UPF0434 protein NMA0874 28.0 15 0.00051 30.7 0.5 29 230-260 10-38 (68)
130 2fo7_A Synthetic consensus TPR 27.9 1.3E+02 0.0046 24.2 6.6 33 11-43 4-36 (136)
131 1kt0_A FKBP51, 51 kDa FK506-bi 27.7 96 0.0033 33.7 7.1 38 8-45 317-354 (457)
132 2hf1_A Tetraacyldisaccharide-1 27.7 15 0.00052 30.6 0.5 28 230-259 10-37 (68)
133 4eqf_A PEX5-related protein; a 27.4 3.5E+02 0.012 27.0 10.9 37 9-45 66-102 (365)
134 2e2e_A Formate-dependent nitri 27.3 98 0.0033 27.8 6.1 38 8-45 44-81 (177)
135 3mkr_A Coatomer subunit epsilo 27.2 1.8E+02 0.0062 29.2 8.7 29 14-42 206-234 (291)
136 2pl2_A Hypothetical conserved 26.7 80 0.0027 30.0 5.6 30 9-38 119-148 (217)
137 1nzn_A CGI-135 protein, fissio 25.8 1.8E+02 0.006 27.0 7.4 45 11-55 77-121 (126)
138 3iqc_A FLIS, flagellar protein 25.8 79 0.0027 29.3 5.1 36 6-41 34-69 (131)
139 2kat_A Uncharacterized protein 25.7 87 0.003 26.0 5.1 32 10-41 55-86 (115)
140 2gw1_A Mitochondrial precursor 25.7 1.3E+02 0.0044 31.6 7.4 95 11-127 415-512 (514)
141 2vsy_A XCC0866; transferase, g 25.3 2.5E+02 0.0085 30.8 10.0 43 8-50 23-65 (568)
142 3cv0_A Peroxisome targeting si 25.3 4.6E+02 0.016 25.1 11.5 37 8-44 172-208 (327)
143 2pl2_A Hypothetical conserved 25.1 1.3E+02 0.0045 28.5 6.8 31 14-44 45-75 (217)
144 2fo7_A Synthetic consensus TPR 24.5 1.7E+02 0.0059 23.5 6.7 34 11-44 38-71 (136)
145 2pk7_A Uncharacterized protein 24.3 16 0.00056 30.5 0.1 28 230-259 10-37 (69)
146 3o48_A Mitochondria fission 1 24.3 2.2E+02 0.0074 26.7 7.7 47 11-57 81-127 (134)
147 3uq3_A Heat shock protein STI1 24.0 1.8E+02 0.0062 26.9 7.5 41 4-44 135-175 (258)
148 3as5_A MAMA; tetratricopeptide 23.9 61 0.0021 28.3 3.9 35 7-41 7-41 (186)
149 4gyw_A UDP-N-acetylglucosamine 23.9 3.3E+02 0.011 31.8 11.1 41 8-48 43-83 (723)
150 3fp2_A TPR repeat-containing p 23.7 88 0.003 33.2 5.8 45 6-50 23-67 (537)
151 1vh6_A Flagellar protein FLIS; 23.7 90 0.0031 29.5 5.1 35 6-40 31-65 (145)
152 4i17_A Hypothetical protein; T 23.3 2E+02 0.0067 26.8 7.6 31 14-44 48-78 (228)
153 2hr2_A Hypothetical protein; a 23.2 32 0.0011 33.0 1.9 40 6-45 96-139 (159)
154 1qqe_A Vesicular transport pro 23.1 1E+02 0.0036 30.7 5.9 32 11-42 161-192 (292)
155 3ma5_A Tetratricopeptide repea 23.1 66 0.0023 26.6 3.7 31 11-41 44-74 (100)
156 4i17_A Hypothetical protein; T 23.0 1.3E+02 0.0045 28.1 6.3 36 8-43 7-43 (228)
157 2yhc_A BAMD, UPF0169 lipoprote 23.0 4.7E+02 0.016 24.5 11.9 30 11-40 7-36 (225)
158 2jny_A Uncharacterized BCR; st 22.9 21 0.00072 29.7 0.5 28 230-259 12-39 (67)
159 2vsy_A XCC0866; transferase, g 22.7 3E+02 0.01 30.1 10.0 41 8-48 57-97 (568)
160 3qky_A Outer membrane assembly 22.1 1.4E+02 0.0048 28.7 6.4 35 7-41 14-48 (261)
161 1xnf_A Lipoprotein NLPI; TPR, 21.9 1.9E+02 0.0064 27.3 7.2 43 6-48 41-83 (275)
162 4eqf_A PEX5-related protein; a 21.3 6.1E+02 0.021 25.1 11.8 44 80-130 264-308 (365)
163 3as5_A MAMA; tetratricopeptide 21.2 1.7E+02 0.0058 25.4 6.3 38 8-45 42-79 (186)
164 1y8m_A FIS1; mitochondria, unk 21.1 2.4E+02 0.0082 26.8 7.4 47 11-57 80-126 (144)
165 3bee_A Putative YFRE protein; 20.8 2E+02 0.0069 24.2 6.4 46 7-52 5-53 (93)
166 3bee_A Putative YFRE protein; 20.6 1.1E+02 0.0037 26.0 4.6 33 11-43 46-78 (93)
167 2ho1_A Type 4 fimbrial biogene 20.4 1.5E+02 0.005 27.9 6.0 38 8-45 37-74 (252)
168 2cfu_A SDSA1; SDS-hydrolase, l 20.1 98 0.0033 36.1 5.5 61 8-68 449-509 (658)
169 2y4t_A DNAJ homolog subfamily 20.0 1.5E+02 0.0052 30.6 6.5 41 4-44 22-62 (450)
170 4a1s_A PINS, partner of inscut 20.0 2.5E+02 0.0085 28.5 8.1 38 5-42 45-82 (411)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.83 E-value=8.5e-22 Score=213.26 Aligned_cols=165 Identities=21% Similarity=0.263 Sum_probs=39.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccCCCCCCCCCC
Q 004014 64 EVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRGQQKYPAQPG 143 (779)
Q Consensus 64 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~~~~~~~~~~ 143 (779)
..|||+||||+++|+.++||+|||+||++||||+++...|+++|++|++||++|+||.+|+.||+++.... +++.+
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~----~~~~~ 102 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRN----DPGFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcccc----CCCcc
Confidence 47999999999999999999999999999999999988899999999999999999999999999854321 00000
Q ss_pred CCccCCCCCCCCCCCCCCChhhhcccccCCCCCCcccccccCCCCCCCccccccccccccccccCCCCCCCCCCCCcCCC
Q 004014 144 VSFASSGTNGIHTSTKNATSQARARNDATRTSSTTQAGVSFASPSANGIHRFTKNVTSQTKARNNATGTSSTSVPSSNQN 223 (779)
Q Consensus 144 ~~~~~~~~~g~~~~~~~~~~~~~f~~ffg~~~p~s~F~~~f~~fg~gG~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 223 (779)
.+| .+ .+. . |++....++|+.||+. +|.. ++. +.+.+++++...+
T Consensus 103 --------~~~-~~--~~~---~----f~~~~f~diF~~~Fg~---~g~~-----------~~~---~~~~~g~Dl~~~l 147 (329)
T 3lz8_A 103 --------RQR-QT--HEQ---S----YSQQDFDDIFSSMFGQ---QAHQ-----------RRR---QHAARGHDLEIEV 147 (329)
T ss_dssp ---------------------------------------------------------------------CCCCCCEEEEE
T ss_pred --------ccc-cc--ccC---C----cCCCchhhhhHhhhcC---cCCC-----------CCC---CCcCCCCCEEEEE
Confidence 000 00 000 0 0100011223333321 1100 000 1123477889999
Q ss_pred CcceeeeccccceeEEEeeeeeCCccCCCccccceEEEEcCCCC
Q 004014 224 PGTFWTICNKCRTQYEYLRIYLNNTLLCPNCHEAFLAVEKPPPS 267 (779)
Q Consensus 224 ~~TFwtic~GC~kk~ey~R~~ln~~l~C~~C~~~f~Avev~pp~ 267 (779)
.+||++++.||++.+.+.|.+.+..+....-....+.|.|++|+
T Consensus 148 ~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv 191 (329)
T 3lz8_A 148 AVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGV 191 (329)
T ss_dssp CCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTC
T ss_pred ecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCC
Confidence 99999999999999999887642222211111456778888875
No 2
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.79 E-value=3.6e-20 Score=180.02 Aligned_cols=130 Identities=21% Similarity=0.452 Sum_probs=99.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCC-------chHHHHHHHHHHHHhcchhhHHHhhhcCCccCC
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIG-------ADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRGQ 135 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~-------a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~~ 135 (779)
...|||+||||+++|+.++||++||+|++++||||++... +.++|+.|++||++|+||.+|+.||..+.....
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~~ 87 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDDL 87 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhhc
Confidence 4579999999999999999999999999999999998654 468999999999999999999999987753220
Q ss_pred CCCCCCCCCCccCCCCCCCCCCCCCCChhhhcccccCCCCCCcccccccCCCCCCCccccccccccccccccCCCCCCCC
Q 004014 136 QKYPAQPGVSFASSGTNGIHTSTKNATSQARARNDATRTSSTTQAGVSFASPSANGIHRFTKNVTSQTKARNNATGTSST 215 (779)
Q Consensus 136 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~ffg~~~p~s~F~~~f~~fg~gG~~~~~~~~~~~~~~~~r~~~~~~~ 215 (779)
.. .+. .++ .|. +.. +.
T Consensus 88 ~~--------------~~~------~~~-----~~~------------~~~-----m~---------------------- 103 (155)
T 2l6l_A 88 RN--------------VGP------VDA-----QVY------------LEE-----MS---------------------- 103 (155)
T ss_dssp HT--------------TCS------SSE-----EEE------------TTT-----SE----------------------
T ss_pred cc--------------ccc------ccc-----eee------------HHH-----hc----------------------
Confidence 00 000 000 000 000 00
Q ss_pred CCCCcCCCCcceeeeccccceeEEEeeeeeC--CccCCCccccceEEE
Q 004014 216 SVPSSNQNPGTFWTICNKCRTQYEYLRIYLN--NTLLCPNCHEAFLAV 261 (779)
Q Consensus 216 ~~~~~~~~~~TFwtic~GC~kk~ey~R~~ln--~~l~C~~C~~~f~Av 261 (779)
......+||+.|+ |...|+|++..|+ ..+.|++|...|.++
T Consensus 104 ----~~e~~~~f~~~Cr-CG~~f~i~~~~l~~~~~v~C~sCSl~~~v~ 146 (155)
T 2l6l_A 104 ----WNEGDHSFYLSCR-CGGKYSVSKDEAEEVSLISCDTCSLIIELL 146 (155)
T ss_dssp ----EETTTTEEEEECS-SSCEEEEETTHHHHCCEEECSSSSCEEEEE
T ss_pred ----cccCCcEEEEcCC-CCCeEEecHHHhCCCCEEECCCCceEEEEE
Confidence 0012358999998 9999999999887 789999999999876
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=2.4e-18 Score=148.20 Aligned_cols=71 Identities=37% Similarity=0.574 Sum_probs=67.6
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 64 EVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 64 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
..|||+||||+++|+.++||++||+|++++|||+++.+++.+.|+.|++||++|+||.+|..||+++..+.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 36999999999999999999999999999999999988899999999999999999999999999998655
No 4
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.6e-18 Score=151.92 Aligned_cols=72 Identities=33% Similarity=0.551 Sum_probs=68.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
...|||+||||++.|+.++||++||+|++++|||+++.+.+.++|+.|++||++|+||.+|..||..+....
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 357999999999999999999999999999999999988889999999999999999999999999997655
No 5
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.7e-18 Score=147.38 Aligned_cols=71 Identities=41% Similarity=0.657 Sum_probs=67.3
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCcc
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPR 133 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~ 133 (779)
...|||+||||+++|+.++||++||+|++++|||++..+++.++|+.|++||++|+||.+|..||+.+..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46899999999999999999999999999999999998889999999999999999999999999998743
No 6
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=7.9e-18 Score=148.86 Aligned_cols=70 Identities=34% Similarity=0.552 Sum_probs=67.1
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCc
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNP 132 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~ 132 (779)
...|||+||||+++|+.++||++||+|++++|||+++.+.+.++|+.|++||++|+||.+|..||+++..
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999999888999999999999999999999999999864
No 7
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1e-17 Score=144.90 Aligned_cols=71 Identities=32% Similarity=0.502 Sum_probs=66.2
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCchHHHHHHHHHHHHhcchhhHHHhhhcCCcc
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKA-IGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPR 133 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~-~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~ 133 (779)
...|||+||||+++|+.++||++||+|++++|||+++. +.+.++|+.|++||++|+||.+|..||.++..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 46799999999999999999999999999999999984 678899999999999999999999999998743
No 8
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=145.66 Aligned_cols=73 Identities=40% Similarity=0.598 Sum_probs=66.5
Q ss_pred cCCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 62 NGEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAI--GADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 62 ~~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~--~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
.+..|||+||||+++|+.++||++||+|++++|||+++.. .+.+.|+.|++||++|+||.+|..||+.+..+.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 3568999999999999999999999999999999999763 577899999999999999999999999987543
No 9
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=148.49 Aligned_cols=72 Identities=42% Similarity=0.627 Sum_probs=66.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAI--GADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~--~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
...|||+||||+++|+.++||++||+|++++|||+++.. .+.++|+.|++||++|+||.+|..||+.+....
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 467999999999999999999999999999999999753 578899999999999999999999999987655
No 10
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.70 E-value=1.6e-17 Score=141.78 Aligned_cols=69 Identities=38% Similarity=0.679 Sum_probs=62.4
Q ss_pred hcCCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 61 VNGEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 61 ~~~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
+....|||+||||+++|+.++||++||+|++++|||+++. +.+.|+.|++||++|+||.+|..||++|.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3456899999999999999999999999999999999853 47899999999999999999999999885
No 11
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.70 E-value=7e-18 Score=150.44 Aligned_cols=71 Identities=35% Similarity=0.581 Sum_probs=65.5
Q ss_pred cCCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 62 NGEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 62 ~~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
....|||+||||+++|+.++||++||+|++++|||+++ +..++|+.|++||++|+||.+|..||+++....
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 35689999999999999999999999999999999985 456799999999999999999999999997766
No 12
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.70 E-value=7.9e-18 Score=153.03 Aligned_cols=71 Identities=34% Similarity=0.639 Sum_probs=67.0
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 64 EVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKA-IGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 64 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~-~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
..|||+||||+++|+.++||++||+|++++|||+++. +.++++|++|++||++|+||.+|..||+.+..+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 4699999999999999999999999999999999984 6788999999999999999999999999998766
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.69 E-value=1.6e-17 Score=148.05 Aligned_cols=70 Identities=29% Similarity=0.594 Sum_probs=64.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCC-------CCchHHHHHHHHHHHHhcchhhHHHhhhcCCc
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKA-------IGADGAFKLVSEAWSLLSDKAKRLAYNEKLNP 132 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~-------~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~ 132 (779)
...|||+||||+++|+.++||++||+|++++|||+++. ..+.+.|+.|++||++|+||.+|..||..+..
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 45799999999999999999999999999999999874 45778999999999999999999999999874
No 14
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.5e-17 Score=150.26 Aligned_cols=70 Identities=21% Similarity=0.419 Sum_probs=65.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCchHHHHHHHHHHHHhcchhhHHHhhhcCCc
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNK-AIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNP 132 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~-~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~ 132 (779)
...|||+||||+++|+.++||++||+|++++|||+++ .+.+.++|+.|++||+||+|+.+|..||+.+..
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 4579999999999999999999999999999999997 467889999999999999999999999997654
No 15
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=2.2e-17 Score=152.49 Aligned_cols=72 Identities=25% Similarity=0.403 Sum_probs=67.4
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNK-AIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~-~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
...|||+||||+++|+.++||++||+|++++|||+++ .+.+.++|+.|++||++|+||.+|..||+++..+.
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 4589999999999999999999999999999999998 57789999999999999999999999999987654
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.68 E-value=2.6e-17 Score=149.02 Aligned_cols=70 Identities=36% Similarity=0.494 Sum_probs=63.9
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 65 VDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAI--GADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 65 ~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~--~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
.|||+||||+++|+.++||++||+|++++|||+++.. .+.+.|+.|++||++|+||.+|..||..+..+.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~ 73 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 5999999999999999999999999999999999764 377899999999999999999999999987655
No 17
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=1.2e-16 Score=146.87 Aligned_cols=72 Identities=32% Similarity=0.482 Sum_probs=66.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKA-IGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~-~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
...|||+||||+++|+.++||++||+|++++|||+++. +.+.++|+.|++||++|+|+.+|..||.++..+.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 87 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 87 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence 45899999999999999999999999999999999974 5678999999999999999999999999987544
No 18
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.1e-16 Score=140.42 Aligned_cols=62 Identities=39% Similarity=0.535 Sum_probs=59.5
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHH
Q 004014 63 GEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRL 124 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~ 124 (779)
...|||+||||+++|+.++||++||+|++++|||+++.+++.++|+.|++||++|+|+.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCccccc
Confidence 46899999999999999999999999999999999999999999999999999999999875
No 19
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.62 E-value=1.6e-16 Score=145.75 Aligned_cols=70 Identities=29% Similarity=0.482 Sum_probs=65.5
Q ss_pred cCCCCchhhcCCCCCC-CHHHHHHHHHHhhhhhCCCCCCC----CCchHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 62 NGEVDWYAILGTNPWV-DDETVRKQFRKLALSLHPDKNKA----IGADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 62 ~~~~D~Y~ILgV~~~A-~~~eIKkaYRkLal~~HPDkn~~----~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
....|||+||||+++| +.++||++||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..||+.+.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4578999999999999 99999999999999999999975 5678999999999999999999999999875
No 20
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.58 E-value=9.4e-16 Score=153.70 Aligned_cols=70 Identities=33% Similarity=0.561 Sum_probs=66.0
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 65 VDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNK-AIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 65 ~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~-~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
.|||+||||+++|+.++||+|||+|++++|||+++ .+.+.++|+.|++||++|+||.+|+.||+++..+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 72 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 72 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence 59999999999999999999999999999999996 57788999999999999999999999999998655
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.55 E-value=1.5e-15 Score=140.88 Aligned_cols=65 Identities=18% Similarity=0.210 Sum_probs=60.4
Q ss_pred CCchhhcCCCCCCCH--HHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCCc
Q 004014 65 VDWYAILGTNPWVDD--ETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNP 132 (779)
Q Consensus 65 ~D~Y~ILgV~~~A~~--~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~ 132 (779)
.|||+||||++.|+. ++||++||+|++++||||++. .++|+.|++||+||+||.+|+.||.++..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 589999999999998 999999999999999999865 57999999999999999999999987653
No 22
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=1.2e-15 Score=139.83 Aligned_cols=85 Identities=26% Similarity=0.474 Sum_probs=68.8
Q ss_pred HHHHHHhhCCChH-HHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCC------
Q 004014 30 FALKAQNLYPGLE-GISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIG------ 102 (779)
Q Consensus 30 ~a~KAq~L~p~l~-~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~------ 102 (779)
+-.+.++..+..+ +|++||..++.. +....|||.|||++. |+.++||+|||+|++++||||++..+
T Consensus 11 ~~~~i~~W~~~~~~~ir~lL~~l~~~------l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~ 83 (106)
T 3ag7_A 11 IDAKIRKWSSGKSGNIRSLLSTLQYI------LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQK 83 (106)
T ss_dssp HHHHHHHHHTTTTTCHHHHHTTGGGT------SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHH
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHH------hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhH
Confidence 3345566666665 488888776653 234589999999996 99999999999999999999997533
Q ss_pred --chHHHHHHHHHHHHhcchh
Q 004014 103 --ADGAFKLVSEAWSLLSDKA 121 (779)
Q Consensus 103 --a~~~F~~I~eAy~vLsD~~ 121 (779)
|+++|+.|++||++|+|+.
T Consensus 84 ~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 84 YMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCcc
Confidence 5789999999999999985
No 23
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.52 E-value=6.6e-15 Score=145.98 Aligned_cols=68 Identities=22% Similarity=0.392 Sum_probs=62.5
Q ss_pred CCCchhhcCCCCCCC--HHHHHHHHHHhhhhhCCCCCCCCC------chHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 64 EVDWYAILGTNPWVD--DETVRKQFRKLALSLHPDKNKAIG------ADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 64 ~~D~Y~ILgV~~~A~--~~eIKkaYRkLal~~HPDkn~~~~------a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
..|||+||||+++++ ..+||++||+|++++|||+++... +.+.|+.|++||+||+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 579999999999987 999999999999999999998654 56889999999999999999999998775
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.50 E-value=3.6e-15 Score=147.59 Aligned_cols=64 Identities=19% Similarity=0.212 Sum_probs=57.7
Q ss_pred CCchhhcCCCCCCC--HHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 65 VDWYAILGTNPWVD--DETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 65 ~D~Y~ILgV~~~A~--~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
.|||+||||+++|+ .++||+|||+||+++|||+++. +++|+.|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 69999999999998 6999999999999999999865 5799999999999999999999999885
No 25
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.50 E-value=1e-14 Score=144.18 Aligned_cols=67 Identities=24% Similarity=0.417 Sum_probs=61.8
Q ss_pred CCchhhcCCCCCC--CHHHHHHHHHHhhhhhCCCCCCCCC------chHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 65 VDWYAILGTNPWV--DDETVRKQFRKLALSLHPDKNKAIG------ADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 65 ~D~Y~ILgV~~~A--~~~eIKkaYRkLal~~HPDkn~~~~------a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
+|||+||||++++ +..+||++||+|++++|||+++..+ +.+.|+.|++||+||+||.+|..||..+.
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4899999999999 9999999999999999999998654 34689999999999999999999999875
No 26
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.49 E-value=2.4e-14 Score=142.58 Aligned_cols=62 Identities=29% Similarity=0.477 Sum_probs=58.6
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----chHHHHHHHHHHHHhcchhhHHHh
Q 004014 65 VDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIG----ADGAFKLVSEAWSLLSDKAKRLAY 126 (779)
Q Consensus 65 ~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~----a~~~F~~I~eAy~vLsD~~kR~~Y 126 (779)
.|||+||||++.|+.++||++||+|++++||||++... |+++|+.|++||++|+|+.+|..|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 69999999999999999999999999999999998654 778999999999999999999887
No 27
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.49 E-value=4.9e-15 Score=132.39 Aligned_cols=71 Identities=27% Similarity=0.390 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----chHHHHHHHHHHHHhc
Q 004014 43 GISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAIG----ADGAFKLVSEAWSLLS 118 (779)
Q Consensus 43 ~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~~----a~~~F~~I~eAy~vLs 118 (779)
+|++||..++..+ -...++|++|||++.|+.++||+|||+||+++||||++... |+++|+.|++||+||.
T Consensus 17 ~ir~lL~~l~~~L------~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~ 90 (92)
T 2qwo_B 17 NIRALLSTMHTVL------WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFE 90 (92)
T ss_dssp CHHHHHHHGGGTS------CTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh------cccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHH
Confidence 4666776655433 11158999999999999999999999999999999998643 7889999999999997
Q ss_pred c
Q 004014 119 D 119 (779)
Q Consensus 119 D 119 (779)
+
T Consensus 91 ~ 91 (92)
T 2qwo_B 91 N 91 (92)
T ss_dssp H
T ss_pred h
Confidence 5
No 28
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.49 E-value=1.4e-14 Score=125.97 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=56.9
Q ss_pred CCchhhcCCCCC--CCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 65 VDWYAILGTNPW--VDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 65 ~D~Y~ILgV~~~--A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
.++|+||||+++ ++.++||++||+|++++|||++ ++.++|+.|++||++|+|+.+|..+ .++.
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~---~~~~~f~~i~~AYe~L~~~~~r~~~-~~g~ 75 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYNLRM-NLGG 75 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS---CCHHHHHHHHHHHHHHHHHHHHHTT-CCSS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CCHHHHHHHHHHHHHHhhHHHHHHH-hcCC
Confidence 589999999999 9999999999999999999997 4578999999999999999999874 3443
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.46 E-value=3.6e-14 Score=144.40 Aligned_cols=69 Identities=23% Similarity=0.358 Sum_probs=61.6
Q ss_pred CCCCchhhcCCCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------chHHHHHHHHHHHHhcchhhHHHhhhcCC
Q 004014 63 GEVDWYAILGTNPW--VDDETVRKQFRKLALSLHPDKNKAIG------ADGAFKLVSEAWSLLSDKAKRLAYNEKLN 131 (779)
Q Consensus 63 ~~~D~Y~ILgV~~~--A~~~eIKkaYRkLal~~HPDkn~~~~------a~~~F~~I~eAy~vLsD~~kR~~YD~~~~ 131 (779)
...|||+||||++. ++.++||++||+|++++|||+++... +.+.|+.|++||+||+||.+|+.||..+.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 45899999999986 79999999999999999999998643 45679999999999999999999997654
No 30
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.45 E-value=1.6e-14 Score=128.21 Aligned_cols=60 Identities=23% Similarity=0.236 Sum_probs=55.3
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CchHHHHHHHHHHHHhcchhhH
Q 004014 64 EVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNKAI--GADGAFKLVSEAWSLLSDKAKR 123 (779)
Q Consensus 64 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~~~--~a~~~F~~I~eAy~vLsD~~kR 123 (779)
..|+|+||||+++|+.++||++||+|++++|||+++.. .+.++|+.|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 36899999999999999999999999999999999863 4789999999999999998766
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.40 E-value=1.3e-13 Score=137.48 Aligned_cols=67 Identities=24% Similarity=0.392 Sum_probs=61.3
Q ss_pred cCCCCchhhc------CCCC-CCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhhhcC
Q 004014 62 NGEVDWYAIL------GTNP-WVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYNEKL 130 (779)
Q Consensus 62 ~~~~D~Y~IL------gV~~-~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~ 130 (779)
....|||+|| |+++ +|+..+||++||+|++++|||+++. +.+.|+.|++||+||+||.+|..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3568999999 4665 8999999999999999999999976 7889999999999999999999999976
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.8e-13 Score=116.39 Aligned_cols=56 Identities=23% Similarity=0.319 Sum_probs=51.6
Q ss_pred CCchhhcCCCC-CCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhH
Q 004014 65 VDWYAILGTNP-WVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKR 123 (779)
Q Consensus 65 ~D~Y~ILgV~~-~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR 123 (779)
.++|+||||++ +|+.++||++||+|++++|||++ +..+.|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhc
Confidence 48999999999 79999999999999999999995 5678999999999999998655
No 33
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.33 E-value=2.7e-12 Score=137.51 Aligned_cols=116 Identities=28% Similarity=0.325 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCCHHHHHHHHHHh
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVDDETVRKQFRKL 89 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~~~eIKkaYRkL 89 (779)
-+..+|..++..++++.|...+.+|.++.|....+...+..+...+.. ....|+|.+||+.+.++.++|+++|+++
T Consensus 331 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~----~~~~~~y~~lg~~~~~~~~~~~~~y~~~ 406 (450)
T 2y4t_A 331 ALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ----SQKRDYYKILGVKRNAKKQEIIKAYRKL 406 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH----HHSCCSGGGSCSSTTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc----ccchhHHHHhCCCccCCHHHHHHHHHHH
Confidence 345567777888999999999999999999987777777766554322 2457999999999999999999999999
Q ss_pred hhhhCCCCCCCCC----chHHHHHHHHHHHHhcchhhHHHhhhc
Q 004014 90 ALSLHPDKNKAIG----ADGAFKLVSEAWSLLSDKAKRLAYNEK 129 (779)
Q Consensus 90 al~~HPDkn~~~~----a~~~F~~I~eAy~vLsD~~kR~~YD~~ 129 (779)
++.+|||+.+... ++..|+.|.+||++|+|+++|..||..
T Consensus 407 ~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 407 ALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp HHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred HHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 9999999998644 788999999999999999999999973
No 34
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.31 E-value=2.9e-13 Score=160.46 Aligned_cols=73 Identities=32% Similarity=0.545 Sum_probs=40.9
Q ss_pred cCCCCchhhcCCCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCchHHHHHHHHHHHHhcchhhHHHhhhcCCccC
Q 004014 62 NGEVDWYAILGTNPWVDDETVRKQFRKLALSLHPDKNK-AIGADGAFKLVSEAWSLLSDKAKRLAYNEKLNPRG 134 (779)
Q Consensus 62 ~~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDkn~-~~~a~~~F~~I~eAy~vLsD~~kR~~YD~~~~~~~ 134 (779)
....|||+||||+++|+.++||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|+.||++|..+.
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~ 91 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 91 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccc
Confidence 35689999999999999999999999999999999996 57789999999999999999999999999998665
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.26 E-value=6.8e-07 Score=74.87 Aligned_cols=51 Identities=18% Similarity=0.059 Sum_probs=46.5
Q ss_pred chhhcCCCCC---CCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcch
Q 004014 67 WYAILGTNPW---VDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDK 120 (779)
Q Consensus 67 ~Y~ILgV~~~---A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~ 120 (779)
-|.||||++. ++.++|+++||+|....|||+. |....+..|++|+++|...
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence 3889999999 9999999999999999999994 7778899999999999654
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.60 E-value=0.0039 Score=72.75 Aligned_cols=102 Identities=15% Similarity=0.045 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH-------------------HHH--------------
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI-------------------DVY-------------- 54 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~-------------------~v~-------------- 54 (779)
+.-+..+|..++..|+++.|+..+.+|.++.|....+...+..+ ..+
T Consensus 534 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~~~~~~~~~~l~ 613 (681)
T 2pzi_A 534 ISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALPPTEPRVLQIR 613 (681)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 33456788899999999999999999999999864333211111 000
Q ss_pred ---HH--HHhhhcCCCCchhhcCCCCCCCH--HHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHH
Q 004014 55 ---IA--AEKKVNGEVDWYAILGTNPWVDD--ETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSL 116 (779)
Q Consensus 55 ---~a--a~~~~~~~~D~Y~ILgV~~~A~~--~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~v 116 (779)
+. ......+..|||.|||++.++.. .+|+++||+||++.+++ .+++.+|..|+.|
T Consensus 614 ~~ll~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 614 ALVLGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 11 12244677889999999776655 77999999999976554 5799999999886
No 37
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=93.73 E-value=0.015 Score=57.54 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=35.8
Q ss_pred CCCcCCCCcceeeeccccceeEEEeeeeeCCccCCCcccc-------ceEEEEcCCCC
Q 004014 217 VPSSNQNPGTFWTICNKCRTQYEYLRIYLNNTLLCPNCHE-------AFLAVEKPPPS 267 (779)
Q Consensus 217 ~~~~~~~~~TFwtic~GC~kk~ey~R~~ln~~l~C~~C~~-------~f~Avev~pp~ 267 (779)
+++...+.+||+|+|.||++++.+.|. |..|+. ..+.|.|++|+
T Consensus 3 ~d~~~~l~islee~~~G~~k~i~i~~~-------c~~c~G~g~~~~~~~l~V~Ip~G~ 53 (181)
T 3agx_A 3 PPVTHDLRVSLEEIYSGCTKKMKISHK-------RLNPDGKSIRNEDKILTIEVKKGW 53 (181)
T ss_dssp ---CEEEEECHHHHHHCEEEEEEEEEE-------EECTTSSCEEEEEEEEEEEECTTC
T ss_pred CCEEEEEEEEHHHhcCCcEEEEEEecc-------cCCCCCceEEEEeEEEEEEECCCc
Confidence 466778999999999999999999876 778876 67889998885
No 38
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=87.94 E-value=1.5 Score=39.11 Aligned_cols=41 Identities=22% Similarity=0.223 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
-|.|...++++..++..++|+.|+.++.+|..++|....+-
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~ 45 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFY 45 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 47788999999999999999999999999999999975443
No 39
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=87.43 E-value=0.14 Score=52.93 Aligned_cols=38 Identities=8% Similarity=0.189 Sum_probs=32.5
Q ss_pred CCCCCcCCCCcceeeeccccceeEEEeeeeeCCccCCCccccc
Q 004014 215 TSVPSSNQNPGTFWTICNKCRTQYEYLRIYLNNTLLCPNCHEA 257 (779)
Q Consensus 215 ~~~~~~~~~~~TFwtic~GC~kk~ey~R~~ln~~l~C~~C~~~ 257 (779)
+++++...+.+||+|+|.||++++.|.|..+ |+.|+..
T Consensus 10 ~g~d~~~~l~vslee~~~G~~k~i~~~r~~~-----C~~C~G~ 47 (248)
T 1nlt_A 10 RGKDIKHEISASLEELYKGRTAKLALNKQIL-----CKECEGR 47 (248)
T ss_dssp BCCCEEEEEEECTTHHHHCEEEEEEEEEEEE-----CTTTTTC
T ss_pred CCCCEEEEEEecHHHhcCCceEEEEeeEEEe-----CCCCcCc
Confidence 4678899999999999999999999988654 7777754
No 40
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.35 E-value=0.17 Score=45.30 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=28.8
Q ss_pred CCcCCCCcceeeeccccceeEEEeeeeeCCccCCCccccc
Q 004014 218 PSSNQNPGTFWTICNKCRTQYEYLRIYLNNTLLCPNCHEA 257 (779)
Q Consensus 218 ~~~~~~~~TFwtic~GC~kk~ey~R~~ln~~l~C~~C~~~ 257 (779)
++.+.+.+||+|++.|+++++.|.|. ..|+.|+..
T Consensus 3 ~~~~~l~vslee~~~G~~~~i~~~~~-----~~C~~C~G~ 37 (104)
T 2ctt_A 3 SGSSGMELTFNQAAKGVNKEFTVNIM-----DTCERCNGK 37 (104)
T ss_dssp CCCCCCCCCCSSCCSSSCTTCCSSCC-----EECSSSSSS
T ss_pred ceEEEEEEEHHHHcCCCEEEEEeeee-----eECCCCcCC
Confidence 55778999999999999999998665 457777765
No 41
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=86.07 E-value=1.1 Score=38.78 Aligned_cols=45 Identities=13% Similarity=-0.015 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.|..+..+|..++..++++.|...+.+|.++.|....+...+..
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~ 46 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAA 46 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 467888999999999999999999999999999997655444443
No 42
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=83.29 E-value=3.5 Score=34.13 Aligned_cols=39 Identities=13% Similarity=-0.034 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
.+..+..+|..++..++++.|...+.+|.++.|....+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 41 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGY 41 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence 567788899999999999999999999999999875443
No 43
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=83.09 E-value=0.27 Score=48.38 Aligned_cols=48 Identities=15% Similarity=0.021 Sum_probs=37.1
Q ss_pred CCCCcCCCCcceeeeccccceeEEEeeeeeCCccCCCc---cccceEEEEcCCCCC
Q 004014 216 SVPSSNQNPGTFWTICNKCRTQYEYLRIYLNNTLLCPN---CHEAFLAVEKPPPSN 268 (779)
Q Consensus 216 ~~~~~~~~~~TFwtic~GC~kk~ey~R~~ln~~l~C~~---C~~~f~Avev~pp~~ 268 (779)
++++...+.+||+|+|.||++++.|.|..+ |.+ -....+.|.|++|+.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~-----c~~g~~~~~~~l~V~Ip~G~~ 53 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRF-----IEHKVRNEENIVEVEIKPGWK 53 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEE-----ETTEEEEEEEEEEEEECTTCC
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEe-----cCCceEEeeEEEEEEECCCCc
Confidence 346778899999999999999999988755 421 135678899988853
No 44
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=79.49 E-value=4.8 Score=35.74 Aligned_cols=48 Identities=15% Similarity=0.071 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 3 CNKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 3 cNk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
-|-+.|+.+++++..++..|+|+.|...+.+|.++.|....+...+..
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 55 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAA 55 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 366778889999999999999999999999999999998655444443
No 45
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=78.76 E-value=24 Score=31.73 Aligned_cols=47 Identities=15% Similarity=0.125 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 4 NKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 4 Nk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+...|..+..+|..++..++++.|..++.+|.++.|....+...+..
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 53 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAA 53 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHH
Confidence 45678899999999999999999999999999999987655444443
No 46
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=75.03 E-value=9 Score=35.93 Aligned_cols=37 Identities=16% Similarity=0.061 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLE 42 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~ 42 (779)
+.+..++.+|..++..++|+.|...+.+|.++.|...
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~ 72 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE 72 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc
Confidence 4677888999999999999999999999999988764
No 47
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=72.27 E-value=5.8 Score=36.13 Aligned_cols=50 Identities=16% Similarity=0.099 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 004014 3 CNKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTID 52 (779)
Q Consensus 3 cNk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~ 52 (779)
.+.+.+.....+|..++..++++.|+.++.+|.++.|....+...+..+.
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 75 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLY 75 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34566777788999999999999999999999999999877665555544
No 48
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=71.86 E-value=1 Score=43.92 Aligned_cols=45 Identities=7% Similarity=-0.018 Sum_probs=33.1
Q ss_pred CCcCCCCcceeeeccccceeEEEeeeeeCCccCCCccccceEEEEcCCCC
Q 004014 218 PSSNQNPGTFWTICNKCRTQYEYLRIYLNNTLLCPNCHEAFLAVEKPPPS 267 (779)
Q Consensus 218 ~~~~~~~~TFwtic~GC~kk~ey~R~~ln~~l~C~~C~~~f~Avev~pp~ 267 (779)
++...+.+||+|+|.||++++.|.|.. ..++- ....+.|.|++|+
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~--~~G~~---~~~~l~V~Ip~G~ 46 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKG--PHGAS---EKTQIDIQLKPGW 46 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEE--TTTEE---EEEEEEEECCTTC
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEec--CCCcE---EeEEEEEEeCCCc
Confidence 345678899999999999999998861 11100 3467888998885
No 49
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=70.85 E-value=42 Score=28.55 Aligned_cols=45 Identities=18% Similarity=0.068 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
..+..+..+|..++..++++.|...+.+|..+.|....+...+..
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 51 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRAL 51 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHH
Confidence 346778899999999999999999999999999997655444433
No 50
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=67.57 E-value=12 Score=30.57 Aligned_cols=39 Identities=5% Similarity=-0.072 Sum_probs=31.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHH-HHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEG-ISQMLM 49 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~-i~qll~ 49 (779)
...+|..++..++++.|...+.+|..+.|.... +...+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg 42 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMG 42 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 356788999999999999999999999998755 433333
No 51
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=66.59 E-value=14 Score=39.41 Aligned_cols=35 Identities=20% Similarity=0.105 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPG 40 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~ 40 (779)
+.|..++.+|..++..++++.|...+.+|.++.+.
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~ 255 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEG 255 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 55778889999999999999999999999985544
No 52
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=66.39 E-value=17 Score=32.14 Aligned_cols=49 Identities=10% Similarity=-0.080 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 2 ECNKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 2 ecNk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.+-+.+..+..+|..++..++++.|...+.+|..+.|....+...+..
T Consensus 12 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 60 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGA 60 (142)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHH
Confidence 3456777888899999999999999999999999999988665444443
No 53
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=66.19 E-value=16 Score=29.71 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.+..+..+|..++..++++.|...+.+|..+.|....+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 41 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLY 41 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 3567788899999999999999999999999999875443
No 54
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=65.61 E-value=9.3 Score=41.89 Aligned_cols=36 Identities=19% Similarity=-0.009 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
+.|..++.++..++..++|..|...+.+|..+.|..
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~ 301 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEME 301 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc
Confidence 557788899999999999999999999999999986
No 55
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=62.66 E-value=19 Score=32.34 Aligned_cols=68 Identities=16% Similarity=-0.001 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCC
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPW 76 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~ 76 (779)
.+.-+..+|..++..+++..|+..+.+|.++.|....+-..+..+ +......-....+|-.+|.+.|.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~--~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKA--RIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHH--HHHHhcHHHHHHHHHHHHhcCCC
Confidence 355567789999999999999999999999999976544333333 32222111123456667777765
No 56
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=62.47 E-value=9.3 Score=34.62 Aligned_cols=39 Identities=13% Similarity=-0.126 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHH
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQM 47 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ql 47 (779)
.-+..+|..++..++++.|+..+.+|.++.|....+...
T Consensus 46 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 46 IYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 345567888999999999999999999999997544333
No 57
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=62.42 E-value=16 Score=32.19 Aligned_cols=77 Identities=13% Similarity=-0.056 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCCHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVDDETVRKQFR 87 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~~~eIKkaYR 87 (779)
+.-+..+|..++..++++.|+..+.+|.++.|....+-..+..+... ....-....+|-.+|.+.|.- .+++....
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~--~~~~~~A~~~~~~al~l~P~~--~~a~~~l~ 122 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA--MREWSKAQRAYEDALQVDPSN--EEAREGVR 122 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHCTTC--HHHHHHHH
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHCcCC--HHHHHHHH
Confidence 45566788999999999999999999999999986554444443322 111111223555667776643 33444444
Q ss_pred H
Q 004014 88 K 88 (779)
Q Consensus 88 k 88 (779)
+
T Consensus 123 ~ 123 (126)
T 4gco_A 123 N 123 (126)
T ss_dssp H
T ss_pred H
Confidence 3
No 58
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=62.00 E-value=19 Score=37.48 Aligned_cols=36 Identities=17% Similarity=0.016 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
+.|..+..++..++..++++.|...+.+|..+.|..
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 180 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYE 180 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc
Confidence 457788889999999999999999999999999987
No 59
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=61.99 E-value=24 Score=27.73 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
..+.-+..+|..++..++++.|...+.+|..+.|....+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 45 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 45 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 346667788999999999999999999999999987544
No 60
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=61.98 E-value=27 Score=28.89 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.|..+..+|..++..++++.|..++.+|..+.|....+.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 41 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYI 41 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHH
Confidence 4577788899999999999999999999999999875443
No 61
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=61.56 E-value=23 Score=32.88 Aligned_cols=50 Identities=12% Similarity=-0.182 Sum_probs=41.4
Q ss_pred CCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 2 ECNKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 2 ecNk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
+.+-+.+.-+..+|..++..|+++.|...+.+|..+.|....+...+..+
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~ 79 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAI 79 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 44667788888999999999999999999999999999987655444433
No 62
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=61.03 E-value=13 Score=33.87 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-...++..++..|+++.|...+.+|.++.|....+-..+..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 47 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGK 47 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 5556788999999999999999999999999997655444433
No 63
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=60.91 E-value=11 Score=31.56 Aligned_cols=44 Identities=16% Similarity=0.093 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
.+.-+..+|..++..++++.|+..+.+|.++.|....+...+..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 49 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGK 49 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34556788999999999999999999999999998665444443
No 64
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=60.77 E-value=29 Score=27.17 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
-+..+|..++..++++.|...+.+|..+.|....+...+..
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34566888899999999999999999999988665544443
No 65
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=57.64 E-value=19 Score=32.43 Aligned_cols=32 Identities=13% Similarity=0.111 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhh
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNL 37 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L 37 (779)
+.|..+++++..++..++|..|...+.+|..+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTR 40 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46888999999999999999999999999999
No 66
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=57.15 E-value=8.8 Score=37.00 Aligned_cols=36 Identities=22% Similarity=0.100 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPG 40 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~ 40 (779)
..+|..++.++..++..|+|+.|...+.+|.++.|+
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 468999999999999999999999999999999999
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=55.33 E-value=28 Score=30.45 Aligned_cols=45 Identities=24% Similarity=0.158 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
.+.|..+..+|..++..++++.|...+.+|..+.|....+...+.
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 54 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRS 54 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 356888899999999999999999999999999998754443333
No 68
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=55.17 E-value=34 Score=29.04 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
.+.+.-+..+|..++..++++.|...+.+|.+++|....+...+..+
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 70 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMV 70 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 34456667889999999999999999999999999986655444443
No 69
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=54.09 E-value=37 Score=30.67 Aligned_cols=47 Identities=13% Similarity=-0.077 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 3 CNKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 3 cNk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
.+-+.+..+..+|..++..|+++.|...+.+|..+.|....+...+.
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 62 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLG 62 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHH
Confidence 45567777888999999999999999999999999998765544333
No 70
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.38 E-value=39 Score=27.75 Aligned_cols=43 Identities=26% Similarity=0.247 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHH
Q 004014 4 NKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQ 46 (779)
Q Consensus 4 Nk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~q 46 (779)
+...+.-+..+|..++..++++.|..++.++..+.|....+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 50 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFC 50 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 3456778888999999999999999999999999998754433
No 71
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=52.91 E-value=10 Score=35.78 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhC
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLY 38 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~ 38 (779)
+.+|..+..+|..++..++++.|..++.+|..+.
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 35 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH 35 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999999998
No 72
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.45 E-value=33 Score=29.27 Aligned_cols=42 Identities=21% Similarity=0.007 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
+.-+..+|..++..++++.|...+.++.++.|....+...+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 666778899999999999999999999999998754443333
No 73
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=51.18 E-value=27 Score=30.38 Aligned_cols=91 Identities=14% Similarity=-0.027 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCCHHHHHHHHHHh
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVDDETVRKQFRKL 89 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~~~eIKkaYRkL 89 (779)
.+..+|..++..++++.|...+.+|.++.|....+..++..+.... + ..++-...|++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-------g--------------~~~~A~~~~~~- 76 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAEN-------E--------------KDGLAIIALNH- 76 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-------T--------------CHHHHHHHHHH-
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-------C--------------CHHHHHHHHHH-
Confidence 4567889999999999999999999999999866554444433211 1 12333445544
Q ss_pred hhhhCCCCCCCCCchHHHHHHHHHHHHhcch-hhHHHhhh
Q 004014 90 ALSLHPDKNKAIGADGAFKLVSEAWSLLSDK-AKRLAYNE 128 (779)
Q Consensus 90 al~~HPDkn~~~~a~~~F~~I~eAy~vLsD~-~kR~~YD~ 128 (779)
++.+.|+. ...+..+..+|..+.+. .....|++
T Consensus 77 al~l~P~~------~~~~~~la~~~~~~g~~~~A~~~~~~ 110 (121)
T 1hxi_A 77 ARMLDPKD------IAVHAALAVSHTNEHNANAALASLRA 110 (121)
T ss_dssp HHHHCTTC------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 56667763 23455555566655552 23334443
No 74
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=50.50 E-value=47 Score=27.80 Aligned_cols=42 Identities=10% Similarity=-0.008 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
+.-+..+|..++..++++.|...+.+|.++.|........+.
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 60 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLG 60 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence 455667899999999999999999999999998755443333
No 75
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=49.92 E-value=31 Score=29.32 Aligned_cols=45 Identities=16% Similarity=-0.069 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTID 52 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~ 52 (779)
+.-+..+|..++..++++.|...+.+|.++.|....+...+..+.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 455667899999999999999999999999999877655555443
No 76
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=49.52 E-value=41 Score=27.11 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-+..+|..++..++++.|...+.++..+.|....+...+..
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4456677888999999999999999999999987555444443
No 77
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=49.45 E-value=1.1e+02 Score=30.73 Aligned_cols=42 Identities=19% Similarity=0.086 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
|..+..+|..++..++++.|...+.+|..+.|....+...+.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 45 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRA 45 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 566788899999999999999999999999998755443333
No 78
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=49.42 E-value=48 Score=26.86 Aligned_cols=33 Identities=9% Similarity=0.003 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
.-+..+|..++..++++.|+..+.+|.+++|..
T Consensus 39 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 39 VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 334567888999999999999999999999996
No 79
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=49.35 E-value=44 Score=31.01 Aligned_cols=40 Identities=18% Similarity=0.035 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHH
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQML 48 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll 48 (779)
.-+..+|..++..++++.|+.++.+|..+.|....+...+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 128 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKL 128 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 4456778888999999999999999999998875443333
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=49.20 E-value=27 Score=32.40 Aligned_cols=43 Identities=16% Similarity=-0.125 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-+..+|..++..++++.|...+.+|..+.|....+...+..
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 3455678888999999999999999999999987655444443
No 81
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=48.40 E-value=27 Score=31.63 Aligned_cols=43 Identities=5% Similarity=-0.205 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-+..+|..++..++++.|...+.+|..+.|....+...+..
T Consensus 55 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 97 (148)
T 2vgx_A 55 SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 3445678899999999999999999999999987655444443
No 82
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=48.38 E-value=33 Score=28.59 Aligned_cols=38 Identities=18% Similarity=0.115 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
.+..+..+|..++..++++.|...+.+|.++.|....+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 52 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKL 52 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHH
Confidence 35567788999999999999999999999999987444
No 83
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=47.62 E-value=52 Score=28.53 Aligned_cols=41 Identities=12% Similarity=-0.028 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
-+..+|..++..++++.|...+.+|.++.|....+...+..
T Consensus 53 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~ 93 (121)
T 1hxi_A 53 AWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 93 (121)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34456778889999999999999999999998655444433
No 84
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=47.22 E-value=53 Score=26.47 Aligned_cols=36 Identities=11% Similarity=-0.003 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
-+..+|..++..++++.|+..+.+|.++.|....+.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 455678888999999999999999999999986543
No 85
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=46.45 E-value=60 Score=26.56 Aligned_cols=42 Identities=21% Similarity=0.053 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
+.-+..+|..++..++++.|..++.++..+.|....+...+.
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 445667888899999999999999999999998755443333
No 86
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=46.31 E-value=50 Score=26.37 Aligned_cols=35 Identities=17% Similarity=-0.002 Sum_probs=26.9
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+..+|..++..++++.|...+.+|..+.|....+.
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 43 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYW 43 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHH
Confidence 34567778888888888888888888888765443
No 87
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=46.28 E-value=27 Score=30.79 Aligned_cols=44 Identities=7% Similarity=-0.177 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
+.-+..+|..++..++++.|...+.+|..+.|....+...+..+
T Consensus 52 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 95 (142)
T 2xcb_A 52 ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAEC 95 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 44466788999999999999999999999999986655444443
No 88
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=46.19 E-value=55 Score=27.42 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
.-+..+|..++..++++.|...+.++..++|..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 345567899999999999999999999999987
No 89
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=45.66 E-value=1.1e+02 Score=24.18 Aligned_cols=30 Identities=10% Similarity=-0.095 Sum_probs=26.5
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPG 40 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~ 40 (779)
+..+|..++..++++.|...+.+|.++.|.
T Consensus 43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 43 WLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 455678888999999999999999999998
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=45.52 E-value=68 Score=27.85 Aligned_cols=43 Identities=16% Similarity=-0.140 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-+..+|..++..++++.|...+.+|.+++|....+...+..
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~ 89 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4456678889999999999999999999999987554444333
No 91
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.24 E-value=48 Score=28.22 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
..+..+..+|..++..+++..|...+.+|.++.|..
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP 61 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc
Confidence 457778899999999999999999999999999986
No 92
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=45.20 E-value=67 Score=27.29 Aligned_cols=44 Identities=11% Similarity=0.055 Sum_probs=34.4
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHH
Q 004014 12 KEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYI 55 (779)
Q Consensus 12 ~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~ 55 (779)
..+|..++..|++..|..++.+|.++.|....+..-+..++..+
T Consensus 50 ~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~~~ 93 (104)
T 2v5f_A 50 DYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM 93 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHHHH
Confidence 35567778899999999999999999999877655555555444
No 93
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=44.39 E-value=51 Score=27.38 Aligned_cols=43 Identities=14% Similarity=-0.133 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-+..+|..++..++++.|..++.+|..+.|....+...+..
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 4556678888999999999999999999999987555444443
No 94
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=44.28 E-value=58 Score=26.37 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.-+..+|..++..++++.|..++.++..+.|....+.
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHH
Confidence 34466788889999999999999999999998865443
No 95
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=43.68 E-value=1.9e+02 Score=31.56 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=22.5
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 13 EIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 13 ~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
.+|..++..++++.|...+.+|.++.|....+...+..+
T Consensus 79 ~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 79 RRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345555666666666666666666666654444444444
No 96
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=42.91 E-value=36 Score=36.24 Aligned_cols=44 Identities=18% Similarity=0.112 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
..+.-+..+|..++..++++.|+.++.+|.++.|....+...+.
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 314 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRA 314 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 44566778888899999999999999999999998755443333
No 97
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=42.83 E-value=32 Score=36.34 Aligned_cols=37 Identities=22% Similarity=0.148 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
++.|..++.+|..++..|++..|...+.+|..+.|+.
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~ 39 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDP 39 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccH
Confidence 4678999999999999999999999999999999964
No 98
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=40.60 E-value=1.2e+02 Score=29.16 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChH
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLE 42 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~ 42 (779)
....+|..++..|+++.|...+.++..++|...
T Consensus 150 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 150 KQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 346789999999999999999999999999853
No 99
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=40.52 E-value=72 Score=25.77 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+.-+..+|..++..+++..|...+.++..+.|....+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 45 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 45 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHH
Confidence 5667788999999999999999999999999976443
No 100
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=40.12 E-value=77 Score=26.79 Aligned_cols=40 Identities=15% Similarity=-0.162 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
-+..+|..++..++++.|...+.+|.++.|....+...+.
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 45 YYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 3456688889999999999999999999999755443333
No 101
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=39.91 E-value=67 Score=31.65 Aligned_cols=77 Identities=16% Similarity=0.074 Sum_probs=44.9
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCC--HHHHHHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVD--DETVRKQFRK 88 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~--~~eIKkaYRk 88 (779)
+..+|..++..++++.|..++.++..+.|....+...+.. ++............|=.+|.+.|... ...+.++++.
T Consensus 275 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 352 (359)
T 3ieg_A 275 KERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAE--AYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRL 352 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHH--HHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 4567888999999999999999999999987554433333 22221111111223334566665432 2344555544
Q ss_pred h
Q 004014 89 L 89 (779)
Q Consensus 89 L 89 (779)
+
T Consensus 353 ~ 353 (359)
T 3ieg_A 353 L 353 (359)
T ss_dssp H
T ss_pred H
Confidence 4
No 102
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=39.52 E-value=89 Score=25.53 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDV 53 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v 53 (779)
+.-+..+|..++..++++.|..++.++..+.|+. .+...+..+..
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~l~~~~~ 123 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP-DVLKKCQQAEK 123 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCH-HHHHHHHHHHH
Confidence 4456677888999999999999999999999964 44444444443
No 103
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=38.27 E-value=16 Score=38.17 Aligned_cols=39 Identities=13% Similarity=-0.174 Sum_probs=31.5
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
+..+|..++..++++.|+..+.+|.+++|....+...+.
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 271 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRG 271 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 457789999999999999999999999998755443333
No 104
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=38.12 E-value=62 Score=30.60 Aligned_cols=28 Identities=21% Similarity=0.147 Sum_probs=14.3
Q ss_pred HHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 14 IAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 14 iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
+|..++..++++.|...+.+|.++.|..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 4444555555555555555555555544
No 105
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=36.46 E-value=67 Score=32.24 Aligned_cols=44 Identities=20% Similarity=0.154 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
+.-...+|..++..|++++|...+.+|..+.|....+...|..+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~ 160 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAET 160 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHH
Confidence 34457889999999999999999999999999987665555543
No 106
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=36.40 E-value=82 Score=26.29 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=29.4
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLE 42 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~ 42 (779)
+..+|..++..++++.|...+.++..++|...
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~ 36 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGV 36 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc
Confidence 46789999999999999999999999999876
No 107
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=36.05 E-value=61 Score=29.85 Aligned_cols=42 Identities=10% Similarity=-0.164 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
.-+..++..++..++++.|...+.+|.++.|....+...+..
T Consensus 71 ~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 71 DYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 335567888899999999999999999999998655444443
No 108
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=35.98 E-value=68 Score=27.14 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=30.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQ 46 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~q 46 (779)
-+.+.|.+++.|+++.|...+-+|...||....+-+
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 467789999999999999999999999999864433
No 109
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=35.64 E-value=64 Score=27.23 Aligned_cols=41 Identities=17% Similarity=-0.040 Sum_probs=32.9
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 004014 12 KEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTID 52 (779)
Q Consensus 12 ~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~ 52 (779)
..+|..++..|+++.|+..+.+|..+.|....+......+.
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 44577789999999999999999999999877665544433
No 110
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=34.88 E-value=61 Score=29.18 Aligned_cols=43 Identities=14% Similarity=-0.037 Sum_probs=31.3
Q ss_pred HHHHHHHHH-HHHccCH--HHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 9 ARAKEIAER-KLTEKNY--AGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 9 ~ra~~iAek-~l~~~D~--~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
.-+..+|.. .+..+++ +.|...+.+|..+.|....+...+..+
T Consensus 79 ~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 124 (177)
T 2e2e_A 79 ELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 345566777 6788888 999999999999998876554444443
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=34.60 E-value=14 Score=34.02 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 004014 4 NKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTI 51 (779)
Q Consensus 4 Nk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~ 51 (779)
|..........|..++..|+++.|...+.+|..+.|....+...+..+
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~ 49 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADC 49 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 445555677888899999999999999999999999876655554443
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=34.25 E-value=77 Score=32.82 Aligned_cols=42 Identities=19% Similarity=-0.009 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
+.-+..+|..++..++++.|+.++.+|.++.|....+...+.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 237 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRG 237 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 566778899999999999999999999999998755443333
No 113
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=33.90 E-value=92 Score=30.61 Aligned_cols=43 Identities=14% Similarity=-0.031 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHH
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLM 49 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~ 49 (779)
++..+..+|..++..++++.|..++.++..+.|....+...+.
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a 44 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRA 44 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHH
Confidence 4667788899999999999999999999999998755443333
No 114
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=33.24 E-value=87 Score=28.02 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
.-+..+|..++..++++.|...+.+|.++.|....+.
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHH
Confidence 3445668888999999999999999999999986543
No 115
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=33.11 E-value=90 Score=27.12 Aligned_cols=33 Identities=6% Similarity=0.036 Sum_probs=26.9
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 12 KEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 12 ~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
..++..+...++++.|+.++.+|..+.|+.+.+
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~ 119 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELV 119 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHH
Confidence 345566678899999999999999999987544
No 116
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=33.02 E-value=1.3e+02 Score=28.75 Aligned_cols=49 Identities=16% Similarity=0.072 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAA 57 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa 57 (779)
+-+..+|...+..+||..|++++.++.++.|.-.....|...++-.+..
T Consensus 72 d~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 72 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3456678888999999999999999999999998888888887765543
No 117
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=32.42 E-value=82 Score=26.71 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhC
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLY 38 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~ 38 (779)
|.-|.+|+..++..++|..|...+.+|.++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 5678899999999999999999999998875
No 118
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=31.62 E-value=2.4e+02 Score=33.13 Aligned_cols=117 Identities=16% Similarity=0.203 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHH----HH------Hhhhc-CCCCchhhcCCC-
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYI----AA------EKKVN-GEVDWYAILGTN- 74 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~----aa------~~~~~-~~~D~Y~ILgV~- 74 (779)
.|.-+..+|..+...|+++.|...+.+|.++.|....+...|..+...+ .+ ...++ ...+.|--||.-
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l 87 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTL 87 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3455667789999999999999999999999999865543333322110 00 00111 112222233321
Q ss_pred -CCCCHHHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcc-hhhHHHhhhcC
Q 004014 75 -PWVDDETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSD-KAKRLAYNEKL 130 (779)
Q Consensus 75 -~~A~~~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD-~~kR~~YD~~~ 130 (779)
..-..++-.+.|++ |+.++|+. ..++..+..+|.-+++ .+....|.+..
T Consensus 88 ~~~g~~~~A~~~~~k-Al~l~P~~------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al 138 (723)
T 4gyw_A 88 KEMQDVQGALQCYTR-AIQINPAF------ADAHSNLASIHKDSGNIPEAIASYRTAL 138 (723)
T ss_dssp HHTTCHHHHHHHHHH-HHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHH-HHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 11123333444444 55666663 4567777788887777 34445555443
No 119
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=31.12 E-value=92 Score=28.32 Aligned_cols=42 Identities=14% Similarity=0.034 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 4 NKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 4 Nk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.+.+.-+..+|..++..++++.|...+.++..+.|....+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 45 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAW 45 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHH
Confidence 445677778889999999999999999999999999875443
No 120
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=30.94 E-value=1.4e+02 Score=28.05 Aligned_cols=42 Identities=14% Similarity=-0.015 Sum_probs=33.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTID 52 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~ 52 (779)
+..+|..++..|+++.|...+.+|.++.|....+...+..+.
T Consensus 91 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 91 LEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 455688889999999999999999999999866555554443
No 121
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=30.90 E-value=83 Score=28.31 Aligned_cols=35 Identities=9% Similarity=-0.089 Sum_probs=20.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
...++...+..+++..|...+.+|..+.|....+.
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~ 110 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQRAIALNTVYADAY 110 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHH
Confidence 33445556666666666666666666666654443
No 122
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=30.89 E-value=3e+02 Score=24.92 Aligned_cols=34 Identities=21% Similarity=0.052 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
.++.+...+|..++..++++.|...+.+|. .|..
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~ 37 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DPHS 37 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCCh
Confidence 478888999999999999999999999984 4543
No 123
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=30.65 E-value=49 Score=30.79 Aligned_cols=33 Identities=15% Similarity=0.022 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHccCH-HHH---HHHHHHHHhhC
Q 004014 6 DEAARAKEIAERKLTEKNY-AGA---KKFALKAQNLY 38 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~-~gA---~r~a~KAq~L~ 38 (779)
|.|++.+..|..++..+|+ +.+ -....||+.+.
T Consensus 27 dgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii 63 (130)
T 1orj_A 27 DKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDII 63 (130)
T ss_dssp HHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999 888 66677776654
No 124
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=29.52 E-value=2.9e+02 Score=27.33 Aligned_cols=115 Identities=12% Similarity=0.028 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH----------HHHHhhhc-CCCCchhhcCCCC-
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVY----------IAAEKKVN-GEVDWYAILGTNP- 75 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~----------~aa~~~~~-~~~D~Y~ILgV~~- 75 (779)
+.-+..+|..++..++++.|...+.+|..+.|....+...+..+... +.....+. .....|-.||.--
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 296 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCI 296 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 45566788888999999999999999999999875443333322211 00000111 1111222222110
Q ss_pred -CCCHHHHHHHHHHhhhhhCCCCCC-----CCCchHHHHHHHHHHHHhcchhhH
Q 004014 76 -WVDDETVRKQFRKLALSLHPDKNK-----AIGADGAFKLVSEAWSLLSDKAKR 123 (779)
Q Consensus 76 -~A~~~eIKkaYRkLal~~HPDkn~-----~~~a~~~F~~I~eAy~vLsD~~kR 123 (779)
.-..++-...|++ ++...|+... .+.....+..+..+|..|++...-
T Consensus 297 ~~g~~~~A~~~~~~-al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 349 (368)
T 1fch_A 297 NLGAHREAVEHFLE-ALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAY 349 (368)
T ss_dssp HHTCHHHHHHHHHH-HHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGH
T ss_pred HCCCHHHHHHHHHH-HHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhH
Confidence 1123333333433 4555665421 122356788888889888876543
No 125
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=28.94 E-value=74 Score=28.24 Aligned_cols=36 Identities=11% Similarity=0.139 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
.-+.+.|.++..|+++.|...+-+|...||....+-
T Consensus 22 ~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL 57 (95)
T 1om2_A 22 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 57 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 346778999999999999999999999999985443
No 126
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=28.43 E-value=73 Score=30.37 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=29.2
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 12 KEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 12 ~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
..+|..++..+++..|+..+.++.+.+|..+..
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 183 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPDTQAT 183 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCcc
Confidence 467888899999999999999999999997644
No 127
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=28.15 E-value=17 Score=30.47 Aligned_cols=29 Identities=28% Similarity=0.642 Sum_probs=22.8
Q ss_pred eccccceeEEEeeeeeCCccCCCccccceEE
Q 004014 230 ICNKCRTQYEYLRIYLNNTLLCPNCHEAFLA 260 (779)
Q Consensus 230 ic~GC~kk~ey~R~~ln~~l~C~~C~~~f~A 260 (779)
+|+-|+..+.|.+. ...+.|+.|+..|-.
T Consensus 10 ~CP~ck~~L~~~~~--~~~LiC~~cg~~YPI 38 (70)
T 2js4_A 10 VCPVCKGRLEFQRA--QAELVCNADRLAFPV 38 (70)
T ss_dssp BCTTTCCBEEEETT--TTEEEETTTTEEEEE
T ss_pred ECCCCCCcCEEeCC--CCEEEcCCCCceecC
Confidence 69999999998654 566889999877643
No 128
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=28.08 E-value=71 Score=30.62 Aligned_cols=31 Identities=19% Similarity=0.142 Sum_probs=25.5
Q ss_pred cCHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 004014 22 KNYAGAKKFALKAQNLYPGLEGISQMLMTID 52 (779)
Q Consensus 22 ~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~ 52 (779)
++++.|..++.+|..+.|........+..++
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 6899999999999999999876665555544
No 129
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=28.00 E-value=15 Score=30.67 Aligned_cols=29 Identities=17% Similarity=0.336 Sum_probs=22.6
Q ss_pred eccccceeEEEeeeeeCCccCCCccccceEE
Q 004014 230 ICNKCRTQYEYLRIYLNNTLLCPNCHEAFLA 260 (779)
Q Consensus 230 ic~GC~kk~ey~R~~ln~~l~C~~C~~~f~A 260 (779)
+|+-|+..+.|.+. ...+.|+.|+..|-.
T Consensus 10 ~CP~ck~~L~~~~~--~~~LiC~~cg~~YPI 38 (68)
T 2jr6_A 10 VCPVTKGRLEYHQD--KQELWSRQAKLAYPI 38 (68)
T ss_dssp BCSSSCCBCEEETT--TTEEEETTTTEEEEE
T ss_pred ECCCCCCcCeEeCC--CCEEEcCCCCcEecC
Confidence 69999999988653 566889999877643
No 130
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=27.92 E-value=1.3e+02 Score=24.24 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=26.0
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEG 43 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~ 43 (779)
+..+|..++..++++.|..++.++..+.|....
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 36 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 36 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchh
Confidence 456678888888888888888888888887643
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=27.70 E-value=96 Score=33.71 Aligned_cols=38 Identities=24% Similarity=0.048 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.-+..+|..++..++++.|+.++.+|.++.|....+.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 354 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGL 354 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHH
Confidence 55667889999999999999999999999999875443
No 132
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=27.66 E-value=15 Score=30.64 Aligned_cols=28 Identities=21% Similarity=0.564 Sum_probs=22.3
Q ss_pred eccccceeEEEeeeeeCCccCCCccccceE
Q 004014 230 ICNKCRTQYEYLRIYLNNTLLCPNCHEAFL 259 (779)
Q Consensus 230 ic~GC~kk~ey~R~~ln~~l~C~~C~~~f~ 259 (779)
+|+-|+..+.|.+. ...+.|+.|+..|-
T Consensus 10 ~CP~ck~~L~~~~~--~~~LiC~~cg~~YP 37 (68)
T 2hf1_A 10 VCPLCKGPLVFDKS--KDELICKGDRLAFP 37 (68)
T ss_dssp BCTTTCCBCEEETT--TTEEEETTTTEEEE
T ss_pred ECCCCCCcCeEeCC--CCEEEcCCCCcEec
Confidence 69999999888653 56688999987764
No 133
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=27.45 E-value=3.5e+02 Score=26.99 Aligned_cols=37 Identities=22% Similarity=0.057 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
..+..+|..++..++++.|...+.+|..+.|....+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 102 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAW 102 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHH
Confidence 3477889999999999999999999999999875443
No 134
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=27.31 E-value=98 Score=27.77 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.-+..+|..++..++++.|...+.+|..+.|....+.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 81 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELY 81 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 34456778899999999999999999999999875443
No 135
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=27.25 E-value=1.8e+02 Score=29.20 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=16.7
Q ss_pred HHHHHHHccCHHHHHHHHHHHHhhCCChH
Q 004014 14 IAERKLTEKNYAGAKKFALKAQNLYPGLE 42 (779)
Q Consensus 14 iAek~l~~~D~~gA~r~a~KAq~L~p~l~ 42 (779)
+|..++..|+++.|...+.+|..+.|...
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 34445556666666666666666666553
No 136
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=26.72 E-value=80 Score=30.02 Aligned_cols=30 Identities=10% Similarity=-0.221 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhhC
Q 004014 9 ARAKEIAERKLTEKNYAGAKKFALKAQNLY 38 (779)
Q Consensus 9 ~ra~~iAek~l~~~D~~gA~r~a~KAq~L~ 38 (779)
.-+..++..++..|+++.|+..+.+|.++.
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 334556677777777777777777777777
No 137
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=25.84 E-value=1.8e+02 Score=26.95 Aligned_cols=45 Identities=18% Similarity=0.099 Sum_probs=38.1
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYI 55 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~ 55 (779)
+.-+|...+..+||..|++++....+..|.-..+..|...++--+
T Consensus 77 lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 77 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999888777777666543
No 138
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=25.84 E-value=79 Score=29.35 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
|.|++.+..|..++..+|++.+-....||+.+.-.|
T Consensus 34 dgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L 69 (131)
T 3iqc_A 34 EGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTEL 69 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999998766443
No 139
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=25.72 E-value=87 Score=26.05 Aligned_cols=32 Identities=13% Similarity=-0.045 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 10 RAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 10 ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
-+..+|..++..++++.|+..+.+|..+.|..
T Consensus 55 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 55 AWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 34567888899999999999999999998864
No 140
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=25.65 E-value=1.3e+02 Score=31.59 Aligned_cols=95 Identities=16% Similarity=0.038 Sum_probs=53.8
Q ss_pred HHHHHHHHHH---ccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCchhhcCCCCCCCHHHHHHHHH
Q 004014 11 AKEIAERKLT---EKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWYAILGTNPWVDDETVRKQFR 87 (779)
Q Consensus 11 a~~iAek~l~---~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y~ILgV~~~A~~~eIKkaYR 87 (779)
+..+|..++. .++++.|...+.+|..+.|....+...+..+.. -+| ..++-...|+
T Consensus 415 ~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~----------------~~g-----~~~~A~~~~~ 473 (514)
T 2gw1_A 415 LVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKL----------------QQE-----DIDEAITLFE 473 (514)
T ss_dssp HHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH----------------HTT-----CHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH----------------Hhc-----CHHHHHHHHH
Confidence 4456677777 899999999999999999987654333332221 111 2233334444
Q ss_pred HhhhhhCCCCCCCCCchHHHHHHHHHHHHhcchhhHHHhh
Q 004014 88 KLALSLHPDKNKAIGADGAFKLVSEAWSLLSDKAKRLAYN 127 (779)
Q Consensus 88 kLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~~kR~~YD 127 (779)
.++.+.|+......+......+.....++.+|+.+..|.
T Consensus 474 -~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
T 2gw1_A 474 -ESADLARTMEEKLQAITFAEAAKVQQRIRSDPVLAKKIQ 512 (514)
T ss_dssp -HHHHHCSSHHHHHHHHHHHHHHHHHHHHTSTHHHHHHHH
T ss_pred -HHHHhccccHHHHHHHHHHHHHHHHHHhhCCHHHHHHhh
Confidence 455666763211111222233333455677777777664
No 141
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.32 E-value=2.5e+02 Score=30.82 Aligned_cols=43 Identities=14% Similarity=0.052 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.-+..+|..++..++++.|...+.+|.++.|....+...+..
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 65 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGR 65 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4456677888899999999999999999999987555444433
No 142
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=25.32 E-value=4.6e+02 Score=25.13 Aligned_cols=37 Identities=19% Similarity=0.109 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+.-+..+|..++..++++.|...+.++..+.|....+
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 208 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL 208 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHH
Confidence 4445667888888888888888888888888876444
No 143
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=25.14 E-value=1.3e+02 Score=28.48 Aligned_cols=31 Identities=16% Similarity=-0.032 Sum_probs=18.7
Q ss_pred HHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 14 IAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 14 iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+|..++..|+++.|...+.+|.++.|.....
T Consensus 45 lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a 75 (217)
T 2pl2_A 45 LARTQLKLGLVNPALENGKTLVARTPRYLGG 75 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 3455566666666666666666666665433
No 144
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=24.51 E-value=1.7e+02 Score=23.52 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=28.2
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+..+|..++..++++.|+..+.++..+.|....+
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 71 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA 71 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHH
Confidence 4456777888999999999999999999986443
No 145
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=24.34 E-value=16 Score=30.53 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=22.0
Q ss_pred eccccceeEEEeeeeeCCccCCCccccceE
Q 004014 230 ICNKCRTQYEYLRIYLNNTLLCPNCHEAFL 259 (779)
Q Consensus 230 ic~GC~kk~ey~R~~ln~~l~C~~C~~~f~ 259 (779)
+|+-|+..+.|.+. ...+.|+.|+..|-
T Consensus 10 ~CP~ck~~L~~~~~--~~~LiC~~cg~~YP 37 (69)
T 2pk7_A 10 ACPICKGPLKLSAD--KTELISKGAGLAYP 37 (69)
T ss_dssp CCTTTCCCCEECTT--SSEEEETTTTEEEE
T ss_pred eCCCCCCcCeEeCC--CCEEEcCCCCcEec
Confidence 69999998888653 56688999987764
No 146
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=24.26 E-value=2.2e+02 Score=26.75 Aligned_cols=47 Identities=9% Similarity=-0.009 Sum_probs=39.7
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAA 57 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa 57 (779)
+.-+|...+..|||..|++++.+..+..|....+..|...++--++.
T Consensus 81 LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki~k 127 (134)
T 3o48_A 81 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQK 127 (134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 44568888899999999999999999999998888888877765543
No 147
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=24.00 E-value=1.8e+02 Score=26.94 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 4 NKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 4 Nk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+.+.+.-+..+|..++..++++.|...+.+|..+.|....+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 175 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARG 175 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHH
Confidence 34555666778899999999999999999999999987544
No 148
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=23.91 E-value=61 Score=28.34 Aligned_cols=35 Identities=6% Similarity=-0.090 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
.+.-+..+|..++..++++.|...+.++..+.|..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 41 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD 41 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC
Confidence 34444445555555555555555555555555544
No 149
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=23.87 E-value=3.3e+02 Score=31.85 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQML 48 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll 48 (779)
+.-+..+|..++..|++++|+..+.+|.++.|....+...|
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 44456778888889999999999999999999875544333
No 150
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=23.74 E-value=88 Score=33.23 Aligned_cols=45 Identities=22% Similarity=0.161 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMT 50 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~ 50 (779)
+.|..+..+|..++..++++.|...+.+|.++.|....+...+..
T Consensus 23 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 67 (537)
T 3fp2_A 23 AYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISA 67 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 457888999999999999999999999999999987554433333
No 151
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=23.67 E-value=90 Score=29.53 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPG 40 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~ 40 (779)
|.|++.+.+|..++..+|++.+-..+.||+.+.-.
T Consensus 31 dgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~e 65 (145)
T 1vh6_A 31 NGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQE 65 (145)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999887633
No 152
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=23.34 E-value=2e+02 Score=26.84 Aligned_cols=31 Identities=16% Similarity=-0.027 Sum_probs=19.1
Q ss_pred HHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 14 IAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 14 iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+|..++..++++.|..++.+|.++.|....+
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 78 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKNYNLANA 78 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCSHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhCcchHHH
Confidence 5666666666666666666666666665443
No 153
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=23.21 E-value=32 Score=33.02 Aligned_cols=40 Identities=18% Similarity=-0.130 Sum_probs=32.4
Q ss_pred HHHHHH----HHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 6 DEAARA----KEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 6 ~EA~ra----~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.+.-+ ..++..+...++++.|+..+.+|..+.|+..+|.
T Consensus 96 d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~ 139 (159)
T 2hr2_A 96 DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 139 (159)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 444445 6778888899999999999999999999875543
No 154
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=23.13 E-value=1e+02 Score=30.68 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=25.5
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLE 42 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~ 42 (779)
+..++..++..++++.|...+.+|..+.|...
T Consensus 161 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 161 FIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 44567777788899999999999998888753
No 155
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=23.13 E-value=66 Score=26.63 Aligned_cols=31 Identities=3% Similarity=-0.206 Sum_probs=26.1
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
+..+|..++..++++.|...+.+|.++.|..
T Consensus 44 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 44 YYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 3456788889999999999999999987764
No 156
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=23.05 E-value=1.3e+02 Score=28.08 Aligned_cols=36 Identities=22% Similarity=0.047 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCC-ChHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYP-GLEG 43 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p-~l~~ 43 (779)
+.-+..+|..++..++++.|..++.+|..+.| ....
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 43 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSV 43 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcH
Confidence 35566778888888888888888888888887 4433
No 157
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=22.98 E-value=4.7e+02 Score=24.47 Aligned_cols=30 Identities=27% Similarity=0.247 Sum_probs=16.5
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCC
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPG 40 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~ 40 (779)
+..+|..++..|+++.|...+.++..++|.
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~ 36 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPF 36 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 444455555555555555555555555554
No 158
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=22.93 E-value=21 Score=29.73 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=21.8
Q ss_pred eccccceeEEEeeeeeCCccCCCccccceE
Q 004014 230 ICNKCRTQYEYLRIYLNNTLLCPNCHEAFL 259 (779)
Q Consensus 230 ic~GC~kk~ey~R~~ln~~l~C~~C~~~f~ 259 (779)
+|+-|+..+.|... ...+.|+.|+..|-
T Consensus 12 ~CP~ck~~L~~~~~--~g~LvC~~c~~~YP 39 (67)
T 2jny_A 12 ACPKDKGPLRYLES--EQLLVNERLNLAYR 39 (67)
T ss_dssp BCTTTCCBCEEETT--TTEEEETTTTEEEE
T ss_pred CCCCCCCcCeEeCC--CCEEEcCCCCcccc
Confidence 69999998888543 55688999987664
No 159
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.71 E-value=3e+02 Score=30.14 Aligned_cols=41 Identities=20% Similarity=0.236 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQML 48 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll 48 (779)
+.-+..+|..++..++++.|...+.+|.++.|....+...+
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 44456677778888888888888888888888765444333
No 160
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=22.11 E-value=1.4e+02 Score=28.69 Aligned_cols=35 Identities=14% Similarity=-0.009 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCCh
Q 004014 7 EAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGL 41 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l 41 (779)
.+..+..+|..++..++++.|...+.++..++|..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~ 48 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH 48 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Confidence 35566777888888888888888888888888776
No 161
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=21.91 E-value=1.9e+02 Score=27.31 Aligned_cols=43 Identities=16% Similarity=-0.028 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHH
Q 004014 6 DEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQML 48 (779)
Q Consensus 6 ~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll 48 (779)
..+.-+..+|..++..++++.|...+.+|..+.|....+...+
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 83 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL 83 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 4466667788899999999999999999999999875544333
No 162
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=21.25 E-value=6.1e+02 Score=25.13 Aligned_cols=44 Identities=14% Similarity=0.084 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhhhhCCCCCCCCCchHHHHHHHHHHHHhcch-hhHHHhhhcC
Q 004014 80 ETVRKQFRKLALSLHPDKNKAIGADGAFKLVSEAWSLLSDK-AKRLAYNEKL 130 (779)
Q Consensus 80 ~eIKkaYRkLal~~HPDkn~~~~a~~~F~~I~eAy~vLsD~-~kR~~YD~~~ 130 (779)
++-...|++ ++..+|+. ...+..+..+|..+++. ..+..|.+..
T Consensus 264 ~~A~~~~~~-al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al 308 (365)
T 4eqf_A 264 EEAVEAYTR-ALEIQPGF------IRSRYNLGISCINLGAYREAVSNFLTAL 308 (365)
T ss_dssp HHHHHHHHH-HHHHCTTC------HHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHhcCCCc------hHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 333444444 45567763 35566667777777663 3344444433
No 163
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=21.24 E-value=1.7e+02 Score=25.35 Aligned_cols=38 Identities=5% Similarity=-0.034 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.-+..+|..++..++++.|...+.++..+.|....+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 79 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVA 79 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence 34456678888899999999999999999998865443
No 164
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=21.11 E-value=2.4e+02 Score=26.76 Aligned_cols=47 Identities=9% Similarity=-0.009 Sum_probs=39.6
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAA 57 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa 57 (779)
+.-+|...+..+||..|+++.....+..|....+..|...++--++.
T Consensus 80 LYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~k 126 (144)
T 1y8m_A 80 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQK 126 (144)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 44568888899999999999999999999998888888877765543
No 165
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.81 E-value=2e+02 Score=24.19 Aligned_cols=46 Identities=13% Similarity=-0.006 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHccC---HHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 004014 7 EAARAKEIAERKLTEKN---YAGAKKFALKAQNLYPGLEGISQMLMTID 52 (779)
Q Consensus 7 EA~ra~~iAek~l~~~D---~~gA~r~a~KAq~L~p~l~~i~qll~~~~ 52 (779)
.+..+...|+.++..++ ...|...+.+|..++|......-++....
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~ 53 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDH 53 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHH
Confidence 35667778888877666 79999999999999999977766665443
No 166
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.61 E-value=1.1e+02 Score=25.99 Aligned_cols=33 Identities=9% Similarity=-0.108 Sum_probs=27.8
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhhCCChHH
Q 004014 11 AKEIAERKLTEKNYAGAKKFALKAQNLYPGLEG 43 (779)
Q Consensus 11 a~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~ 43 (779)
..-++..++..++|..|.....++....|..+.
T Consensus 46 ~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 46 LSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 344578889999999999999999999998433
No 167
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=20.40 E-value=1.5e+02 Score=27.89 Aligned_cols=38 Identities=18% Similarity=0.038 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHH
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGIS 45 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~ 45 (779)
+.-+..+|..++..++++.|...+.+|..+.|....+.
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 74 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAH 74 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHH
Confidence 66677888888888888888888888888888765443
No 168
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=20.07 E-value=98 Score=36.05 Aligned_cols=61 Identities=13% Similarity=0.047 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhcCCCCch
Q 004014 8 AARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGISQMLMTIDVYIAAEKKVNGEVDWY 68 (779)
Q Consensus 8 A~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i~qll~~~~v~~aa~~~~~~~~D~Y 68 (779)
+.+++..|.+++..|||.=|...+..+....|.....++|++.+...++.+..-..-++||
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~~~~r~~y 509 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAENAGWRNSY 509 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 3556678999999999999999999999999999999888887776666554322334555
No 169
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=20.05 E-value=1.5e+02 Score=30.56 Aligned_cols=41 Identities=15% Similarity=0.027 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChHHH
Q 004014 4 NKDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLEGI 44 (779)
Q Consensus 4 Nk~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~~i 44 (779)
+-+.+.-+..+|..++..++++.|...+.++..+.|....+
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~ 62 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIA 62 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHH
Confidence 33566777888888888899999999998888888876443
No 170
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=20.05 E-value=2.5e+02 Score=28.52 Aligned_cols=38 Identities=11% Similarity=-0.111 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHhhCCChH
Q 004014 5 KDEAARAKEIAERKLTEKNYAGAKKFALKAQNLYPGLE 42 (779)
Q Consensus 5 k~EA~ra~~iAek~l~~~D~~gA~r~a~KAq~L~p~l~ 42 (779)
-..+..+..+|..++..++++.|..++.+|..+.|...
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~ 82 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL 82 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh
Confidence 46678888999999999999999999999999999864
Done!