Query         004020
Match_columns 779
No_of_seqs    783 out of 5287
Neff          9.4 
Searched_HMMs 13730
Date          Mon Mar 25 11:39:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004020.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004020hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2.9E-42 2.1E-46  363.6  21.4  295   24-435     2-310 (313)
  2 d1nvra_ d.144.1.7 (A:) Cell cy 100.0   3E-37 2.2E-41  315.2  15.1  179  589-776     4-183 (271)
  3 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 9.2E-36 6.7E-40  305.5  14.9  176  589-774     7-182 (276)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0 2.8E-35   2E-39  303.9  18.4  173  589-774    19-192 (293)
  5 d2java1 d.144.1.7 (A:3-271) Se 100.0 8.2E-36   6E-40  304.7  13.2  183  589-774     3-190 (269)
  6 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 1.3E-35 9.7E-40  305.8  14.6  177  590-774     8-186 (288)
  7 d2j4za1 d.144.1.7 (A:126-388)  100.0 2.6E-35 1.9E-39  299.7  16.2  173  590-774     6-180 (263)
  8 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 1.4E-35 1.1E-39  311.8  11.6  174  589-774     5-179 (322)
  9 d2jfla1 d.144.1.7 (A:21-308) S 100.0 3.3E-35 2.4E-39  303.1  13.9  173  589-772    11-184 (288)
 10 d1t4ha_ d.144.1.7 (A:) Protein 100.0 2.2E-34 1.6E-38  293.9  18.8  169  593-773    12-188 (270)
 11 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 8.8E-35 6.4E-39  296.7  14.5  174  590-774     5-178 (263)
 12 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0   1E-34 7.5E-39  302.3  15.0  170  590-773    15-186 (309)
 13 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0   3E-34 2.2E-38  302.0  17.4  176  589-774     4-181 (337)
 14 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0   2E-34 1.5E-38  295.4  15.6  174  589-773    12-185 (272)
 15 d1opja_ d.144.1.7 (A:) Abelson 100.0 1.1E-34 8.4E-39  299.3  12.6  176  589-774    16-192 (287)
 16 d1koaa2 d.144.1.7 (A:5915-6264 100.0 8.2E-34   6E-38  300.6  18.3  174  589-774    25-201 (350)
 17 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 2.8E-34 2.1E-38  298.9  13.2  175  588-774     7-185 (307)
 18 d1fota_ d.144.1.7 (A:) cAMP-de 100.0   7E-34 5.1E-38  297.2  16.1  172  590-774     4-177 (316)
 19 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.7E-33 1.2E-37  285.6  17.3  174  590-774     4-177 (258)
 20 d1koba_ d.144.1.7 (A:) Twitchi 100.0 2.1E-33 1.5E-37  297.6  18.6  175  588-774    27-204 (352)
 21 d1jksa_ d.144.1.7 (A:) Death-a 100.0 3.1E-33 2.3E-37  290.1  18.7  176  588-774     8-192 (293)
 22 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 8.6E-34 6.2E-38  294.5  14.4  176  590-773    26-208 (299)
 23 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 1.4E-33 1.1E-37  296.9  14.9  182  589-774    36-242 (325)
 24 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 2.9E-33 2.1E-37  288.7  15.8  177  590-774     7-189 (283)
 25 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 2.6E-33 1.9E-37  287.5  15.1  169  596-773    13-185 (277)
 26 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 4.2E-33 3.1E-37  286.7  16.6  175  590-773     8-187 (285)
 27 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 3.5E-33 2.6E-37  295.9  16.3  172  590-774    41-214 (350)
 28 d1phka_ d.144.1.7 (A:) gamma-s 100.0 8.9E-33 6.5E-37  283.1  17.9  174  589-773     2-184 (277)
 29 d1omwa3 d.144.1.7 (A:186-549)  100.0 5.6E-33   4E-37  296.0  16.9  177  589-777     3-184 (364)
 30 d1fmka3 d.144.1.7 (A:249-533)  100.0 2.8E-33 2.1E-37  287.8  13.3  174  590-774    17-190 (285)
 31 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 7.9E-33 5.7E-37  288.2  13.1  189  582-774     5-218 (301)
 32 d1xjda_ d.144.1.7 (A:) Protein 100.0 2.5E-32 1.8E-36  285.9  16.4  175  590-774     2-179 (320)
 33 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 1.3E-32 9.8E-37  286.2  14.1  179  590-777     2-181 (298)
 34 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 3.3E-32 2.4E-36  280.2  15.9  178  588-773     5-189 (277)
 35 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 1.1E-32 8.1E-37  287.2  12.1  174  594-777     2-179 (299)
 36 d1tkia_ d.144.1.7 (A:) Titin,  100.0 4.7E-32 3.4E-36  284.1  16.8  174  588-774     3-179 (321)
 37 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 3.7E-32 2.7E-36  285.1  14.6  176  590-774     9-189 (317)
 38 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 3.8E-32 2.8E-36  281.3  13.4  179  590-778     2-180 (286)
 39 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 3.3E-32 2.4E-36  279.2  11.6  176  589-776     3-187 (273)
 40 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.6E-31 1.1E-35  281.6  16.8  171  588-774     9-189 (335)
 41 d1ywna1 d.144.1.7 (A:818-1166) 100.0 7.8E-32 5.7E-36  280.8  14.2  183  588-774    11-212 (299)
 42 d1vjya_ d.144.1.7 (A:) Type I  100.0 1.5E-31 1.1E-35  278.3  15.8  175  589-773     2-187 (303)
 43 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 9.6E-32   7E-36  276.0  14.1  176  589-774     6-185 (273)
 44 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0   2E-31 1.5E-35  278.7  14.6  182  589-774    22-223 (311)
 45 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 1.5E-31 1.1E-35  279.2  13.4  182  589-774    19-211 (308)
 46 d1byga_ d.144.1.7 (A:) Carboxy 100.0 1.3E-31 9.5E-36  272.0  11.4  169  590-774     7-176 (262)
 47 d1u46a_ d.144.1.7 (A:) Activat 100.0 2.2E-31 1.6E-35  272.4  12.5  177  590-774     8-190 (273)
 48 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 3.5E-31 2.6E-35  275.2  14.0  181  589-773    12-212 (299)
 49 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 5.2E-31 3.8E-35  275.3  13.6  177  590-773    10-201 (309)
 50 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 9.3E-31 6.8E-35  278.5  15.5  176  588-778    16-198 (346)
 51 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.4E-30 9.9E-35  273.7  15.6  232  132-456    72-309 (313)
 52 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 2.6E-30 1.9E-34  269.5  17.4  172  595-774    32-210 (311)
 53 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 1.7E-30 1.2E-34  273.4  14.4  182  589-778     9-201 (318)
 54 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 3.6E-30 2.6E-34  273.4  16.5  180  588-777     6-191 (345)
 55 d1unla_ d.144.1.7 (A:) Cyclin- 100.0   7E-30 5.1E-34  265.3  17.1  178  590-777     2-180 (292)
 56 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 6.9E-30   5E-34  269.7  17.0  169  590-777    35-208 (328)
 57 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0   3E-30 2.2E-34  274.6  13.8  174  591-778    21-202 (350)
 58 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 2.7E-30   2E-34  270.2  13.1  176  589-774     6-191 (305)
 59 d1csna_ d.144.1.7 (A:) Casein  100.0 2.3E-29 1.7E-33  260.5  16.3  174  589-774     4-189 (293)
 60 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 1.9E-29 1.4E-33  268.9  12.9  177  588-778    16-198 (348)
 61 d2b1pa1 d.144.1.7 (A:46-400) c 100.0   4E-29 2.9E-33  266.4  14.5  172  588-773    15-193 (355)
 62 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 1.6E-29 1.1E-33  264.9  10.9  176  590-774    24-206 (322)
 63 d1ckia_ d.144.1.7 (A:) Casein  100.0 2.4E-28 1.8E-32  254.2  15.4  174  589-774     6-189 (299)
 64 d1xkua_ c.10.2.7 (A:) Decorin   99.9 9.6E-26   7E-30  235.4  24.7  272   54-435    10-290 (305)
 65 d2omza2 c.10.2.1 (A:33-416) In  99.9 7.9E-26 5.8E-30  244.1  24.8  285   64-435    43-368 (384)
 66 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 7.7E-26 5.6E-30  233.5  18.0  266   69-432    15-283 (284)
 67 d2omza2 c.10.2.1 (A:33-416) In  99.9 7.5E-25 5.5E-29  236.3  23.4  292   71-451    28-364 (384)
 68 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 1.4E-24   1E-28  223.8  18.5  216   56-300    13-241 (284)
 69 d1xkua_ c.10.2.7 (A:) Decorin   99.9   1E-23 7.5E-28  219.8  23.2  264   90-453    11-287 (305)
 70 d1p9ag_ c.10.2.7 (G:) von Will  99.9 3.5E-24 2.5E-28  218.5  18.9  202   61-298     6-209 (266)
 71 d1q8ya_ d.144.1.7 (A:) Sky1p {  99.9 8.5E-24 6.2E-28  226.1  13.9  172  590-773    13-204 (362)
 72 d1p9ag_ c.10.2.7 (G:) von Will  99.9 1.8E-22 1.3E-26  205.6  19.8  203  108-431     6-208 (266)
 73 d1zara2 d.144.1.9 (A:91-281) R  99.9   1E-21 7.6E-26  189.1  13.8  137  592-748     2-154 (191)
 74 d1jl5a_ c.10.2.6 (A:) Leucine   99.8 8.8E-18 6.4E-22  177.8  32.4  304   66-438    39-343 (353)
 75 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8   3E-18 2.2E-22  171.5  16.8  219   69-428    12-235 (242)
 76 d1h6ua2 c.10.2.1 (A:36-262) In  99.8 1.7E-18 1.3E-22  171.3  14.0  185   66-293    42-226 (227)
 77 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.8 1.4E-18   1E-22  173.9  13.2  212   54-293     8-234 (242)
 78 d1h6ta2 c.10.2.1 (A:31-240) In  99.8 2.8E-18 2.1E-22  167.3  14.0  179   72-293    31-209 (210)
 79 d1h6ua2 c.10.2.1 (A:36-262) In  99.7 3.7E-18 2.7E-22  168.9  14.0   35  390-426   191-225 (227)
 80 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7 1.9E-18 1.3E-22  166.1  11.0  170   69-273    12-183 (192)
 81 d2omxa2 c.10.2.1 (A:37-235) In  99.7 1.2E-17 8.6E-22  161.4  15.1  175   72-289    25-199 (199)
 82 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7   2E-18 1.5E-22  165.9   8.2  176   92-301    11-187 (192)
 83 d1jl5a_ c.10.2.6 (A:) Leucine   99.7 1.3E-15 9.5E-20  160.7  30.6  298   89-450    38-336 (353)
 84 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 4.2E-17 3.1E-21  158.9  13.8  164   65-269    46-209 (210)
 85 d2omxa2 c.10.2.1 (A:37-235) In  99.7   1E-16 7.6E-21  154.7  14.2  160   65-265    40-199 (199)
 86 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.6 1.8E-17 1.3E-21  182.0  -5.1  109   66-174     3-125 (460)
 87 d1dcea3 c.10.2.2 (A:444-567) R  99.5 5.3E-15 3.9E-19  130.0   7.3  102   69-174     2-103 (124)
 88 d1a9na_ c.10.2.4 (A:) Spliceso  99.5 4.9E-15 3.6E-19  137.0   7.1  124   65-193    18-145 (162)
 89 d1dcea3 c.10.2.2 (A:444-567) R  99.5 1.1E-13 7.8E-18  121.5  10.7  103   92-201     1-104 (124)
 90 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.4 3.7E-15 2.7E-19  157.0  -0.2  196   80-297    22-256 (344)
 91 d1a9na_ c.10.2.4 (A:) Spliceso  99.4 3.4E-14 2.5E-18  131.3   6.4  112   83-200    12-125 (162)
 92 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.4 3.1E-16 2.3E-20  171.8 -10.2  311   90-432     3-411 (460)
 93 d2astb2 c.10.1.3 (B:2136-2419)  99.4   7E-15 5.1E-19  150.0  -0.1  223   69-294     4-235 (284)
 94 d2astb2 c.10.1.3 (B:2136-2419)  99.3   5E-14 3.6E-18  143.6   0.2  250   92-435     3-263 (284)
 95 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.3 8.7E-14 6.3E-18  146.3  -1.5  211   64-297    30-286 (344)
 96 d1m9la_ c.10.3.1 (A:) Outer ar  99.3 9.5E-14 6.9E-18  132.9  -2.6  125  132-290    44-180 (198)
 97 d2ifga3 c.10.2.7 (A:36-191) Hi  99.2 6.4E-12 4.7E-16  114.9   9.2  101   70-173    13-115 (156)
 98 d2ifga3 c.10.2.7 (A:36-191) Hi  99.2 1.2E-11 8.5E-16  113.1  10.4  110   87-200     6-116 (156)
 99 d1m9la_ c.10.3.1 (A:) Outer ar  99.2 1.4E-14   1E-18  138.8 -10.4  119   80-205    39-158 (198)
100 d1j7la_ d.144.1.6 (A:) Type II  98.5 2.1E-07 1.5E-11   92.3  11.8  151  583-746     7-214 (263)
101 d1koha1 c.10.2.3 (A:201-362) m  98.3 4.9E-09 3.6E-13   95.9  -5.9   66  109-175    62-129 (162)
102 d1nd4a_ d.144.1.6 (A:) Aminogl  98.0   6E-06 4.4E-10   80.9  10.0  132  597-746    17-206 (255)
103 d1koha1 c.10.2.3 (A:201-362) m  98.0 4.1E-07   3E-11   82.8   0.3   87   80-167    56-152 (162)
104 d2pula1 d.144.1.6 (A:5-396) Me  97.6  0.0001 7.3E-09   76.9  10.8   78  595-674    31-117 (392)
105 d1pgva_ c.10.1.1 (A:) Tropomod  97.2 2.5E-05 1.8E-09   70.8   0.6   64  233-296    68-143 (167)
106 d1pgva_ c.10.1.1 (A:) Tropomod  97.2 4.4E-05 3.2E-09   69.2   1.5   83   66-148    16-112 (167)
107 d1zyla1 d.144.1.6 (A:4-328) Rd  97.0  0.0011 7.8E-08   66.9   9.9  138  604-746    36-221 (325)
108 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.7  0.0018 1.3E-07   64.8   9.0  161  580-745     3-213 (316)
109 d1nw1a_ d.144.1.8 (A:) Choline  96.5  0.0036 2.6E-07   64.7   9.9   73  595-675    47-128 (395)
110 d1io0a_ c.10.1.1 (A:) Tropomod  96.2 0.00011 8.4E-09   66.3  -3.7  111   86-198    14-143 (166)
111 d1io0a_ c.10.1.1 (A:) Tropomod  96.0 0.00028   2E-08   63.6  -1.9   65  233-297    70-145 (166)
112 d1e7ua4 d.144.1.4 (A:726-1094)  21.2      16  0.0012   35.4   1.8   25  720-744   220-244 (369)

No 1  
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00  E-value=2.9e-42  Score=363.58  Aligned_cols=295  Identities=27%  Similarity=0.489  Sum_probs=223.2

Q ss_pred             CCChhHHHHHHHHHHHcCCCCC-CCC-CCCCCC--cceeeEeCCC---CcEEEEEecCCCccc--cCCccccCCCCCcEE
Q 004020           24 SQSSSDAAAMQALKTSLGNPAS-LGW-TDPDPC--KWKHIQCSPS---NRVTRIQIGGQNIEG--TLPKELNSLSSLTVL   94 (779)
Q Consensus        24 ~~~~~~~~~l~~~k~~~~~~~~-~~w-~~~~~C--~w~gv~c~~~---~~v~~l~l~~~~l~~--~~p~~l~~l~~L~~L   94 (779)
                      -|.++|++||++||+++.++.. .+| .+.|||  .|.||+|+..   .||++|+|++++++|  .+|++|++|++|++|
T Consensus         2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L   81 (313)
T d1ogqa_           2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL   81 (313)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred             CCCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccccc
Confidence            3789999999999999988764 367 467999  4999999864   389999999999998  589999999999999


Q ss_pred             Eccc-CccccCCC-CCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCce
Q 004020           95 EVMK-NKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGAN  172 (779)
Q Consensus        95 ~Ls~-N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~  172 (779)
                      +|++ |+++|.+| .|++|++|++|+|++|++.++++..+..+..|+++++++|++.. .+|..+.+++.|+.+++++|.
T Consensus        82 ~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~-~~p~~l~~l~~L~~l~l~~n~  160 (313)
T d1ogqa_          82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG-TLPPSISSLPNLVGITFDGNR  160 (313)
T ss_dssp             EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES-CCCGGGGGCTTCCEEECCSSC
T ss_pred             ccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccc-cCchhhccCcccceeeccccc
Confidence            9997 89998877 79999999999999999998888888888888888888887755 566666666666666666666


Q ss_pred             eEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCC
Q 004020          173 ITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGP  252 (779)
Q Consensus       173 l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~  252 (779)
                      +++.+|+.++  .+..+                                                 ++.+++++|++++.
T Consensus       161 l~~~ip~~~~--~l~~l-------------------------------------------------~~~l~~~~n~l~~~  189 (313)
T d1ogqa_         161 ISGAIPDSYG--SFSKL-------------------------------------------------FTSMTISRNRLTGK  189 (313)
T ss_dssp             CEEECCGGGG--CCCTT-------------------------------------------------CCEEECCSSEEEEE
T ss_pred             cccccccccc--ccccc-------------------------------------------------cccccccccccccc
Confidence            6666665554  23222                                                 24444444444444


Q ss_pred             CCC-CCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccCCCCcccCccc
Q 004020          253 LPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRV  331 (779)
Q Consensus       253 ~~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (779)
                      .|. +..+ .+..+++++|.+.+.+|..+..+++|+.+++++|.+++.+|...                           
T Consensus       190 ~~~~~~~l-~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~---------------------------  241 (313)
T d1ogqa_         190 IPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG---------------------------  241 (313)
T ss_dssp             CCGGGGGC-CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCC---------------------------
T ss_pred             cccccccc-cccccccccccccccccccccccccccccccccccccccccccc---------------------------
Confidence            443 2222 33356666666666677777777777777777777766555311                           


Q ss_pred             hhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCccccccccccccccccCCeEeccCccccccCC
Q 004020          332 NVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIP  411 (779)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP  411 (779)
                                                          ..++|+.|+|++|+++|.+|.+|+++++|++|+|++|+|+|.||
T Consensus       242 ------------------------------------~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP  285 (313)
T d1ogqa_         242 ------------------------------------LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP  285 (313)
T ss_dssp             ------------------------------------CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred             ------------------------------------cccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC
Confidence                                                11267778888888888889999999999999999999999999


Q ss_pred             ccCCCCCCCCceeccCCc-cccc-CC
Q 004020          412 KELTTLPSLEMLDVSNNH-LFGK-VP  435 (779)
Q Consensus       412 ~~l~~l~~L~~L~Ls~N~-l~g~-iP  435 (779)
                       +++.+++|+.+++++|+ ++|. +|
T Consensus       286 -~~~~L~~L~~l~l~~N~~l~g~plp  310 (313)
T d1ogqa_         286 -QGGNLQRFDVSAYANNKCLCGSPLP  310 (313)
T ss_dssp             -CSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred             -CcccCCCCCHHHhCCCccccCCCCC
Confidence             46889999999999997 5554 44


No 2  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-37  Score=315.23  Aligned_cols=179  Identities=26%  Similarity=0.407  Sum_probs=152.9

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..... ....+++.+|++++++++|||||++++++.+++..|+||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm   82 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   82 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence            467999999999999999999875 689999999975432 233467899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|+|.+++...     ..+++.++..++.||++||+|||+   ++|+||||||+|||+++++++||+|||+|+...
T Consensus        83 Ey~~gg~L~~~l~~~-----~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          83 EYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             ECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             eccCCCcHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence            999999999998543     258999999999999999999997   899999999999999999999999999999775


Q ss_pred             CCCCcccccccccCCcccccccccccCCC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETSGM  776 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~  776 (779)
                      ...........+||+.|||||++.+...+
T Consensus       155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~  183 (271)
T d1nvra_         155 YNNRERLLNKMCGTLPYVAPELLKRREFH  183 (271)
T ss_dssp             ETTEECCBCCCCSCGGGSCTHHHHCSSBC
T ss_pred             cCCccccccceeeCcCccCHhHhcCCCCC
Confidence            44333334567899999999999876544


No 3  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.2e-36  Score=305.54  Aligned_cols=176  Identities=32%  Similarity=0.557  Sum_probs=146.5

Q ss_pred             hcCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE  668 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  668 (779)
                      .++|++.+.||+|+||.||+|+.+  ..||||+++.........++|.+|++++++++|||||++++++.+ +..++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            467999999999999999999865  469999998766566677899999999999999999999998754 56899999


Q ss_pred             ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCC
Q 004020          669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD  748 (779)
Q Consensus       669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  748 (779)
                      |+++|+|.+++....    ..+++..+..|+.||++||+|||+   ++||||||||+|||++.++.+||+|||+|+....
T Consensus        84 y~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_          84 WCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR  156 (276)
T ss_dssp             CCCEEEHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred             cCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence            999999999986543    258999999999999999999997   8999999999999999999999999999987654


Q ss_pred             CCCcccccccccCCcccccccccccC
Q 004020          749 NGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       749 ~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ...........||+.|||||++.+..
T Consensus       157 ~~~~~~~~~~~gt~~y~APE~l~~~~  182 (276)
T d1uwha_         157 WSGSHQFEQLSGSILWMAPEVIRMQD  182 (276)
T ss_dssp             ---------CCCCGGGCCHHHHTTCS
T ss_pred             cCCcccccccccCcccCCHHHHhccc
Confidence            33333345567999999999997653


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-35  Score=303.90  Aligned_cols=173  Identities=26%  Similarity=0.439  Sum_probs=151.4

Q ss_pred             hcCCcccceecccccEEEEEEEE-cCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      .++|++.+.||+|+||.||+|+. .+|+.||||++.....  ...+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC--hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            35799999999999999999986 4799999999875542  23467899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|+|.+++.+.      .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+|+...
T Consensus        97 Ey~~gg~L~~~~~~~------~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~  167 (293)
T d1yhwa1          97 EYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (293)
T ss_dssp             ECCTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeec
Confidence            999999999887432      48899999999999999999997   899999999999999999999999999999875


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ....  .....+||+.|||||++.+..
T Consensus       168 ~~~~--~~~~~~gt~~Y~aPE~~~~~~  192 (293)
T d1yhwa1         168 PEQS--KRSTMVGTPYWMAPEVVTRKA  192 (293)
T ss_dssp             STTC--CBCCCCSCGGGCCHHHHSSSC
T ss_pred             cccc--cccccccCCCccChhhhcCCC
Confidence            4322  234567999999999998753


No 5  
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.2e-36  Score=304.67  Aligned_cols=183  Identities=24%  Similarity=0.407  Sum_probs=143.5

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEe--CCeEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD--GNERLL  665 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l  665 (779)
                      .++|++.+.||+|+||.||+|+.. +|+.||+|++......+...+.+.+|++++++++|||||++++++.+  .+..|+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            367999999999999999999875 68999999998776666677889999999999999999999999875  456899


Q ss_pred             EEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC--CCCcEEcCCCCCCEEEcCCCcEEEEeeccc
Q 004020          666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA--HQSFIHRDLKPSNILLGDDMRAKVADFGLV  743 (779)
Q Consensus       666 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  743 (779)
                      |||||++|+|.+++.+..... ..+++..++.++.||+.||+|||+..  ..+|+||||||+|||++.++.+||+|||+|
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~-~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a  161 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  161 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred             EEecCCCCcHHHHHHhccccC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence            999999999999986544322 36899999999999999999999721  134999999999999999999999999999


Q ss_pred             eecCCCCCcccccccccCCcccccccccccC
Q 004020          744 RLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       744 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +......  ......+||+.|||||++.+..
T Consensus       162 ~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~  190 (269)
T d2java1         162 RILNHDT--SFAKAFVGTPYYMSPEQMNRMS  190 (269)
T ss_dssp             HHC-------------CCCSCCCHHHHTTCC
T ss_pred             eecccCC--CccccCCCCcccCCHHHHcCCC
Confidence            8765432  2234567999999999997653


No 6  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-35  Score=305.80  Aligned_cols=177  Identities=28%  Similarity=0.459  Sum_probs=150.3

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEeccccc-ChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      ++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            57999999999999999999875 789999999975432 2334567999999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|+|.+++....     .+++..+..++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+|+...
T Consensus        88 Ey~~gg~L~~~~~~~~-----~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             CCCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EccCCCCHHHhhhccC-----CCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecc
Confidence            9999999999886543     58999999999999999999996   899999999999999999999999999999876


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ...........+||+.|||||++.+..
T Consensus       160 ~~~~~~~~~~~~GT~~Y~APE~~~~~~  186 (288)
T d1uu3a_         160 PESKQARANSFVGTAQYVSPELLTEKS  186 (288)
T ss_dssp             ----------CCCCGGGCCHHHHHTCC
T ss_pred             cCCcccccccccCCccccCceeeccCC
Confidence            543333344567999999999997654


No 7  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-35  Score=299.68  Aligned_cols=173  Identities=32%  Similarity=0.540  Sum_probs=151.7

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccC-hhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      ++|++.+.||+|+||.||+|+.+ +++.||+|++.+.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57999999999999999999875 6899999998754322 233567899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|+|.+++....     .+++..+..++.||++||+|||+   ++|+||||||+|||++.++++||+|||+|+...
T Consensus        86 Ey~~~g~L~~~l~~~~-----~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1          86 EYAPLGTVYRELQKLS-----KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  157 (263)
T ss_dssp             ECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCC
T ss_pred             eecCCCcHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecC
Confidence            9999999999986543     58999999999999999999997   899999999999999999999999999998765


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ...    .....||+.|||||++.+..
T Consensus       158 ~~~----~~~~~Gt~~Y~APE~~~~~~  180 (263)
T d2j4za1         158 SSR----RTTLCGTLDYLPPEMIEGRM  180 (263)
T ss_dssp             CCC----CEETTEEGGGCCHHHHTTCC
T ss_pred             CCc----ccccCCCCcccCHHHHcCCC
Confidence            432    23457999999999998754


No 8  
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-35  Score=311.85  Aligned_cols=174  Identities=26%  Similarity=0.402  Sum_probs=151.1

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      .++|++.+.||+|+||+||+|+.. +|+.||+|+++... .....+++.+|+.++++++|||||+++++|.+.+..|+||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            568999999999999999999875 68999999987543 3444578899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|+|.+++.+..     .+++..+..++.|++.||+|||+  +++|+||||||+|||+++++++||+|||+|+...
T Consensus        84 Ey~~gg~L~~~l~~~~-----~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  156 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  156 (322)
T ss_dssp             ECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             EcCCCCcHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence            9999999999996543     58999999999999999999996  2489999999999999999999999999998664


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ..    .....+||+.|||||++.+..
T Consensus       157 ~~----~~~~~~GT~~Y~APEvl~~~~  179 (322)
T d1s9ja_         157 DS----MANSFVGTRSYMSPERLQGTH  179 (322)
T ss_dssp             HH----TC---CCSSCCCCHHHHHCSC
T ss_pred             CC----ccccccCCccccCchHHcCCC
Confidence            32    224568999999999998753


No 9  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.3e-35  Score=303.08  Aligned_cols=173  Identities=27%  Similarity=0.421  Sum_probs=150.1

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      .+.|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence            357899999999999999999875 68999999987543  344567899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      |||++|+|.+++.+..    ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+|+...
T Consensus        89 Ey~~~g~L~~~~~~~~----~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1          89 EFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT  161 (288)
T ss_dssp             ECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred             ecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccC
Confidence            9999999999876543    258999999999999999999997   899999999999999999999999999997653


Q ss_pred             CCCCcccccccccCCcccccccccc
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAE  772 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~  772 (779)
                      ..  ........||+.|||||++.+
T Consensus       162 ~~--~~~~~~~~Gt~~y~APE~l~~  184 (288)
T d2jfla1         162 RT--IQRRDSFIGTPYWMAPEVVMC  184 (288)
T ss_dssp             HH--HHHHTCCCSCCTTCCHHHHTT
T ss_pred             CC--cccccccccccccCCHHHHhh
Confidence            31  112234679999999999864


No 10 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-34  Score=293.91  Aligned_cols=169  Identities=28%  Similarity=0.407  Sum_probs=145.6

Q ss_pred             cccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEe----CCeEEEEE
Q 004020          593 SEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD----GNERLLVY  667 (779)
Q Consensus       593 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~  667 (779)
                      +..++||+|+||+||+|+.. +++.||+|++..........+.+.+|++++++++|||||++++++.+    ....|+||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            56678999999999999875 68899999998776666677889999999999999999999999875    34579999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEcCCCCCCEEEc-CCCcEEEEeeccce
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGLVR  744 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--ivHrDlkp~NIll~-~~~~~kl~DFG~a~  744 (779)
                      ||+++|+|.+++.+..     .+++..+..++.||++||+|||+   ++  |+||||||+|||++ +++.+||+|||+|+
T Consensus        92 E~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~  163 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  163 (270)
T ss_dssp             ECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCcHHHHHhccc-----cccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence            9999999999996543     58899999999999999999996   55  99999999999996 57899999999997


Q ss_pred             ecCCCCCcccccccccCCccccccccccc
Q 004020          745 LAPDNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       745 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      .....    .....+||+.|||||++.+.
T Consensus       164 ~~~~~----~~~~~~GT~~Y~aPE~~~~~  188 (270)
T d1t4ha_         164 LKRAS----FAKAVIGTPEFMAPEMYEEK  188 (270)
T ss_dssp             GCCTT----SBEESCSSCCCCCGGGGGTC
T ss_pred             eccCC----ccCCcccCccccCHHHhCCC
Confidence            64332    22456799999999998764


No 11 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.8e-35  Score=296.73  Aligned_cols=174  Identities=30%  Similarity=0.482  Sum_probs=142.0

Q ss_pred             cCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEEe
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY  669 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  669 (779)
                      ++|++.+.||+|+||.||+|++.+++.||||+++....   ..+++.+|++++++++|||||++++++..++..++||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC---cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            47889999999999999999998899999999976432   336789999999999999999999999999999999999


Q ss_pred             cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCC
Q 004020          670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN  749 (779)
Q Consensus       670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  749 (779)
                      +++|+|.+++....    ..+++..++.|+.||+.||+|||+   ++|+||||||+|||+++++.+||+|||+|+.....
T Consensus        82 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_          82 MEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             CTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC--------
T ss_pred             cCCCcHHHHhhccc----cCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCC
Confidence            99999999886543    358899999999999999999996   89999999999999999999999999999876543


Q ss_pred             CCcccccccccCCcccccccccccC
Q 004020          750 GKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       750 ~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      .. .......||+.|||||++.+..
T Consensus       155 ~~-~~~~~~~gt~~y~aPE~l~~~~  178 (263)
T d1sm2a_         155 QY-TSSTGTKFPVKWASPEVFSFSR  178 (263)
T ss_dssp             -----------CTTSCCHHHHTTCC
T ss_pred             Cc-eeecceecCcccCChHHhcCCC
Confidence            22 2223457999999999987654


No 12 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1e-34  Score=302.29  Aligned_cols=170  Identities=28%  Similarity=0.446  Sum_probs=148.2

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccC-hhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      +.|+..+.||+|+||.||+|+.. +++.||||++...... ....+++.+|++++++++|||||++++++.+++..|+||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35899999999999999999865 6889999999765433 344577999999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      |||++|++..++..+     ..+++..+..++.||+.||+|||+   ++|+||||||+|||+++++.+||+|||+|+...
T Consensus        95 E~~~~g~l~~~~~~~-----~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~  166 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (309)
T ss_dssp             ECCSEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             EecCCCchHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccC
Confidence            999999987665433     258999999999999999999997   899999999999999999999999999998654


Q ss_pred             CCCCcccccccccCCccccccccccc
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      ..      ....||+.|||||++.+.
T Consensus       167 ~~------~~~~GT~~Y~APE~~~~~  186 (309)
T d1u5ra_         167 PA------NSFVGTPYWMAPEVILAM  186 (309)
T ss_dssp             SB------CCCCSCGGGCCHHHHTTT
T ss_pred             CC------CccccCccccCHHHHhcc
Confidence            32      345799999999999754


No 13 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-34  Score=302.05  Aligned_cols=176  Identities=29%  Similarity=0.426  Sum_probs=153.6

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEeccccc-ChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV  666 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  666 (779)
                      .++|++.+.||+|+||.||+|+.. +++.||||++++... .....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            357999999999999999999874 799999999976532 233457789999999999999999999999999999999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceec
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA  746 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  746 (779)
                      ||||++|+|.+++....     .+++..++.++.||+.||+|||+   ++|+||||||+|||++++|++||+|||+|+..
T Consensus        84 ~ey~~gg~L~~~~~~~~-----~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~  155 (337)
T d1o6la_          84 MEYANGGELFFHLSRER-----VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             eeccCCCchhhhhhccc-----CCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeeccccccc
Confidence            99999999999986543     57899999999999999999997   89999999999999999999999999999876


Q ss_pred             CCCCCcccccccccCCcccccccccccC
Q 004020          747 PDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       747 ~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      .....  .....+||+.|||||++.+..
T Consensus       156 ~~~~~--~~~~~~GT~~Y~aPE~~~~~~  181 (337)
T d1o6la_         156 ISDGA--TMKTFCGTPEYLAPEVLEDND  181 (337)
T ss_dssp             CCTTC--CBCCCEECGGGCCGGGGSSSC
T ss_pred             ccCCc--ccccceeCHHHhhhhhccCCC
Confidence            44322  234568999999999998754


No 14 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-34  Score=295.39  Aligned_cols=174  Identities=29%  Similarity=0.486  Sum_probs=149.6

Q ss_pred             hcCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE  668 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  668 (779)
                      .++|++.+.||+|+||.||+|++++++.||||+++....   ..+++.+|++++++++|||||++++++.+ +..++|||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~E   87 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE   87 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC---CHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEE
Confidence            457889999999999999999998889999999975432   34679999999999999999999998754 56799999


Q ss_pred             ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCC
Q 004020          669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD  748 (779)
Q Consensus       669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  748 (779)
                      |+++|+|.+++.....   ..+++..++.|+.||++||+|||+   ++|+||||||+|||+++++.+||+|||+|+....
T Consensus        88 y~~~g~L~~~~~~~~~---~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~  161 (272)
T d1qpca_          88 YMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (272)
T ss_dssp             CCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             eCCCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccC
Confidence            9999999998755443   248999999999999999999996   8999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCccccccccccc
Q 004020          749 NGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       749 ~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      .. ........||+.|||||++.+.
T Consensus       162 ~~-~~~~~~~~gt~~y~APE~~~~~  185 (272)
T d1qpca_         162 NE-YTAREGAKFPIKWTAPEAINYG  185 (272)
T ss_dssp             SC-EECCTTCCCCTTTSCHHHHHHC
T ss_pred             Cc-cccccccCCcccccChHHHhCC
Confidence            32 2333456799999999998754


No 15 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.1e-34  Score=299.31  Aligned_cols=176  Identities=31%  Similarity=0.483  Sum_probs=152.0

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      .++|++.+.||+|+||.||+|++. +++.||||+++...   ...+++.+|++++++++|||||++++++.+++..++||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc---chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            457888999999999999999876 58899999987543   23467999999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|+|.+++.....   ..+++..+..|+.||++||+|||+   ++|+||||||+|||+++++.+||+|||+|+...
T Consensus        93 E~~~~g~l~~~l~~~~~---~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~  166 (287)
T d1opja_          93 EFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT  166 (287)
T ss_dssp             ECCTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred             ecccCcchHHHhhhccc---cchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecC
Confidence            99999999999865432   368999999999999999999996   899999999999999999999999999998765


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ... ........||+.|||||++.+..
T Consensus       167 ~~~-~~~~~~~~g~~~y~aPE~~~~~~  192 (287)
T d1opja_         167 GDT-YTAHAGAKFPIKWTAPESLAYNK  192 (287)
T ss_dssp             SSS-SEEETTEEECGGGCCHHHHHHCC
T ss_pred             CCC-ceeeccccccccccChHHHcCCC
Confidence            432 22334456899999999987653


No 16 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=8.2e-34  Score=300.55  Aligned_cols=174  Identities=26%  Similarity=0.423  Sum_probs=151.8

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++....  ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm  102 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  102 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            468999999999999999999875 78999999997553  344577899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEc--CCCcEEEEeecccee
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG--DDMRAKVADFGLVRL  745 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~--~~~~~kl~DFG~a~~  745 (779)
                      |||++|+|.+++....    ..+++..+..|+.||+.||+|||+   ++||||||||+|||++  .++.+||+|||+|+.
T Consensus       103 E~~~gg~L~~~l~~~~----~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~  175 (350)
T d1koaa2         103 EFMSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  175 (350)
T ss_dssp             CCCCSCBHHHHHTCTT----SCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EcCCCCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence            9999999999885432    258999999999999999999997   8999999999999996  468899999999988


Q ss_pred             cCCCCCcccccccccCCcccccccccccC
Q 004020          746 APDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       746 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      .....   ......||+.|||||++.+..
T Consensus       176 ~~~~~---~~~~~~gT~~Y~aPEv~~~~~  201 (350)
T d1koaa2         176 LDPKQ---SVKVTTGTAEFAAPEVAEGKP  201 (350)
T ss_dssp             CCTTS---CEEEECSCTTTCCHHHHHTCC
T ss_pred             ccccc---ccceecCcccccCHHHHcCCC
Confidence            75432   224457999999999997653


No 17 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=2.8e-34  Score=298.92  Aligned_cols=175  Identities=27%  Similarity=0.463  Sum_probs=135.5

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEE
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV  666 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  666 (779)
                      +.+.|++.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++|||||++++++.+++..|+|
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            5578999999999999999999875 6899999999765432 2345688999999999999999999999999999999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEc---CCCcEEEEeeccc
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLV  743 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a  743 (779)
                      ||||++|+|.+++...     ..+++..+..++.||+.||+|||+   ++|+||||||+||++.   +++.+||+|||+|
T Consensus        86 mE~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a  157 (307)
T d1a06a_          86 MQLVSGGELFDRIVEK-----GFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS  157 (307)
T ss_dssp             ECCCCSCBHHHHHHTC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC---
T ss_pred             EeccCCCcHHHhhhcc-----cCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEecccee
Confidence            9999999999999643     258999999999999999999996   8999999999999994   5789999999999


Q ss_pred             eecCCCCCcccccccccCCcccccccccccC
Q 004020          744 RLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       744 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +......   .....+||+.|||||++.+..
T Consensus       158 ~~~~~~~---~~~~~~GT~~y~APE~~~~~~  185 (307)
T d1a06a_         158 KMEDPGS---VLSTACGTPGYVAPEVLAQKP  185 (307)
T ss_dssp             ------------------CTTSCHHHHTTCC
T ss_pred             EEccCCC---eeeeeeeCccccCcHHHcCCC
Confidence            8765432   223467999999999998753


No 18 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=7e-34  Score=297.16  Aligned_cols=172  Identities=30%  Similarity=0.468  Sum_probs=150.9

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEeccccc-ChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      ++|++.+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+.+|+.++++++|||||++++++.+.+..|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            57999999999999999999875 699999999975532 2234577899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+++|++.+++....     .+++..+..++.||+.||+|||+   ++|+||||||+|||++.+|.+||+|||+|+...
T Consensus        84 E~~~gg~l~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~  155 (316)
T d1fota_          84 DYIEGGELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  155 (316)
T ss_dssp             CCCCSCBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             eecCCccccccccccc-----cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEec
Confidence            9999999998886543     47888899999999999999996   899999999999999999999999999998865


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ..     ....+||+.|||||++.+..
T Consensus       156 ~~-----~~~~~Gt~~Y~APE~l~~~~  177 (316)
T d1fota_         156 DV-----TYTLCGTPDYIAPEVVSTKP  177 (316)
T ss_dssp             SC-----BCCCCSCTTTCCHHHHTTCC
T ss_pred             cc-----cccccCcccccCHHHHcCCC
Confidence            43     23467999999999997653


No 19 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-33  Score=285.55  Aligned_cols=174  Identities=28%  Similarity=0.443  Sum_probs=152.5

Q ss_pred             cCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEEe
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY  669 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  669 (779)
                      ++|++.+.||+|+||.||+|++++++.||||+++....   ..+++.+|++++++++||||+++++++.+++..++||||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~---~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS---CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC---CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence            57899999999999999999999899999999976543   335789999999999999999999999999999999999


Q ss_pred             cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCC
Q 004020          670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN  749 (779)
Q Consensus       670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  749 (779)
                      +++|++.+++.....    .+++..+++++.||++||+|||+   ++|+||||||+||++++++.+||+|||+++.....
T Consensus        81 ~~~g~l~~~~~~~~~----~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_          81 MANGCLLNYLREMRH----RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             CTTEEHHHHHHSGGG----CCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS
T ss_pred             cCCCcHHHhhhcccc----CCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCC
Confidence            999999998765543    57899999999999999999996   89999999999999999999999999999876554


Q ss_pred             CCcccccccccCCcccccccccccC
Q 004020          750 GKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       750 ~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      .. .......||+.|+|||++.+..
T Consensus       154 ~~-~~~~~~~~t~~y~aPE~~~~~~  177 (258)
T d1k2pa_         154 EY-TSSVGSKFPVRWSPPEVLMYSK  177 (258)
T ss_dssp             SC-CCCCCSCCCGGGCCHHHHHHCC
T ss_pred             Cc-eeecccCCCCCcCCcHHhcCCC
Confidence            22 2334467999999999987654


No 20 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=2.1e-33  Score=297.65  Aligned_cols=175  Identities=23%  Similarity=0.359  Sum_probs=151.6

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEE
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV  666 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  666 (779)
                      +.++|++.+.||+|+||.||+|+.. +|+.||||++....  ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv  104 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI  104 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3468999999999999999999874 79999999987653  33456788999999999999999999999999999999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEc--CCCcEEEEeeccce
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG--DDMRAKVADFGLVR  744 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~--~~~~~kl~DFG~a~  744 (779)
                      ||||++|+|.+++....    ..+++.+++.|+.||+.||+|||+   ++|+||||||+|||++  .++.+||+|||+|+
T Consensus       105 mE~~~gg~L~~~~~~~~----~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~  177 (352)
T d1koba_         105 LEFLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLAT  177 (352)
T ss_dssp             EECCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             EEcCCCChHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccce
Confidence            99999999988774432    258999999999999999999996   8999999999999998  67899999999999


Q ss_pred             ecCCCCCcccccccccCCcccccccccccC
Q 004020          745 LAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       745 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ......   ......||+.|||||++.+..
T Consensus       178 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~  204 (352)
T d1koba_         178 KLNPDE---IVKVTTATAEFAAPEIVDREP  204 (352)
T ss_dssp             ECCTTS---CEEEECSSGGGCCHHHHTTCC
T ss_pred             ecCCCC---ceeeccCcccccCHHHHcCCC
Confidence            876532   223457999999999997653


No 21 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-33  Score=290.11  Aligned_cols=176  Identities=26%  Similarity=0.388  Sum_probs=152.4

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccCh----hHHHHHHHHHHHHHcCCCCccceEeeEEEeCCe
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE  662 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  662 (779)
                      +.++|++.+.||+|+||.||+|+.. +|+.||||++++.....    ...+.+.+|++++++++|||||++++++.+.+.
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            4578999999999999999999874 78999999997544322    235789999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCC----cEEEE
Q 004020          663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA  738 (779)
Q Consensus       663 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~----~~kl~  738 (779)
                      .|+|||||++|+|.+++....     .+++..++.++.||+.||+|||+   ++|+||||||+||+++.++    .+||+
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~~-----~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~  159 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII  159 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEEC
T ss_pred             EEEEEEcCCCccccchhcccc-----ccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEec
Confidence            999999999999999986543     58999999999999999999997   8999999999999998776    59999


Q ss_pred             eeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       739 DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      |||+|+.......   .....||+.|||||++.+..
T Consensus       160 DfG~a~~~~~~~~---~~~~~~t~~y~APE~~~~~~  192 (293)
T d1jksa_         160 DFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP  192 (293)
T ss_dssp             CCTTCEECTTSCB---CSCCCCCGGGCCHHHHTTCC
T ss_pred             chhhhhhcCCCcc---ccccCCCCcccCHHHHcCCC
Confidence            9999988754322   23457999999999997653


No 22 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=8.6e-34  Score=294.54  Aligned_cols=176  Identities=27%  Similarity=0.457  Sum_probs=138.0

Q ss_pred             cCCcccceecccccEEEEEEEEcC-C---cEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHD-G---TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL  665 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  665 (779)
                      ++|++.+.||+|+||+||+|+++. +   ..||||++.... .....++|.+|++++++++|||||++++++.+++..++
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            568888999999999999998752 3   358899886543 34556789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeecccee
Q 004020          666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL  745 (779)
Q Consensus       666 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  745 (779)
                      |||||++|+|.+++....    ..+++.++..|+.||++||+|||+   ++|+||||||+|||++.++++||+|||+|+.
T Consensus       105 v~Ey~~~g~L~~~~~~~~----~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  177 (299)
T d1jpaa_         105 ITEFMENGSLDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRF  177 (299)
T ss_dssp             EEECCTTEEHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             EEEecCCCcceeeecccc----CCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceE
Confidence            999999999999885433    258999999999999999999997   8999999999999999999999999999987


Q ss_pred             cCCCCCccc---ccccccCCccccccccccc
Q 004020          746 APDNGKHSI---ETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       746 ~~~~~~~~~---~~~~~gt~~y~APE~l~~~  773 (779)
                      .........   .....||+.|||||++.+.
T Consensus       178 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  208 (299)
T d1jpaa_         178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYR  208 (299)
T ss_dssp             ------------------CGGGSCHHHHHSC
T ss_pred             ccCCCCcceeeecccccCCccccCHHHHhcC
Confidence            654322211   1234579999999998754


No 23 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-33  Score=296.88  Aligned_cols=182  Identities=29%  Similarity=0.459  Sum_probs=149.2

Q ss_pred             hcCCcccceecccccEEEEEEEEcC------CcEEEEEEecccccChhHHHHHHHHHHHHHcC-CCCccceEeeEEEeCC
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELHD------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGN  661 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~  661 (779)
                      .++|++.+.||+|+||+||+|+...      ...||+|++.... .......+.+|+.++.++ +|||||++++++.+.+
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            3679999999999999999998653      2368999886543 233446789999999998 8999999999999999


Q ss_pred             eEEEEEEecCCCChhhHhhhcccC------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCC
Q 004020          662 ERLLVYEYMPQGTLSRHLFNRKEE------------------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLK  723 (779)
Q Consensus       662 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlk  723 (779)
                      ..++|||||++|+|.++++.++..                  ....+++..++.|+.||++||+|||+   ++|||||||
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlK  191 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA  191 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCc
Confidence            999999999999999999765421                  12358899999999999999999997   899999999


Q ss_pred             CCCEEEcCCCcEEEEeeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          724 PSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       724 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      |+||+++.++++||+|||+|+...............||+.|||||++.+..
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  242 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  242 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCC
Confidence            999999999999999999998776554433444567899999999987543


No 24 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-33  Score=288.72  Aligned_cols=177  Identities=27%  Similarity=0.483  Sum_probs=142.1

Q ss_pred             cCCcccceecccccEEEEEEEEcCC-----cEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHDG-----TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL  664 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  664 (779)
                      +.|+..++||+|+||.||+|.++..     ..||||++.... ......+|.+|++++++++|||||++++++.+.+..+
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            4688889999999999999987532     479999987543 3445567999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccce
Q 004020          665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR  744 (779)
Q Consensus       665 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  744 (779)
                      +||||+.++++.+++....    ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+
T Consensus        86 ~v~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~  158 (283)
T d1mqba_          86 IITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSR  158 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             EEEEecccCcchhhhhccc----ccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhh
Confidence            9999999999998875443    358999999999999999999997   899999999999999999999999999998


Q ss_pred             ecCCCCCc-ccccccccCCcccccccccccC
Q 004020          745 LAPDNGKH-SIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       745 ~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ........ .......||+.|||||++.+..
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~  189 (283)
T d1mqba_         159 VLEDDPEATYTTSGGKIPIRWTAPEAISYRK  189 (283)
T ss_dssp             ---------------CCCGGGSCHHHHHSCC
T ss_pred             cccCCCccceEeccCCCCccccCHHHHccCC
Confidence            76543221 2233456899999999987653


No 25 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-33  Score=287.46  Aligned_cols=169  Identities=27%  Similarity=0.403  Sum_probs=139.3

Q ss_pred             ceecccccEEEEEEEEc---CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEEecCC
Q 004020          596 NVLGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEYMPQ  672 (779)
Q Consensus       596 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  672 (779)
                      ++||+|+||.||+|.++   +++.||||+++....+....+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            57999999999999764   35689999997655445556789999999999999999999999865 467899999999


Q ss_pred             CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCCCCc
Q 004020          673 GTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKH  752 (779)
Q Consensus       673 gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  752 (779)
                      |+|.+++....     .+++..++.|+.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+........
T Consensus        92 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          92 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  163 (277)
T ss_dssp             EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             CcHHHHHhhcc-----CCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence            99999986543     58999999999999999999997   89999999999999999999999999999977554322


Q ss_pred             c-cccccccCCccccccccccc
Q 004020          753 S-IETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       753 ~-~~~~~~gt~~y~APE~l~~~  773 (779)
                      . ......||+.|||||++.+.
T Consensus       164 ~~~~~~~~gt~~y~APE~l~~~  185 (277)
T d1xbba_         164 YKAQTHGKWPVKWYAPECINYY  185 (277)
T ss_dssp             EEC----CCCGGGCCHHHHHHC
T ss_pred             cccccccCCCceecCchhhcCC
Confidence            2 22345799999999998654


No 26 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-33  Score=286.74  Aligned_cols=175  Identities=25%  Similarity=0.445  Sum_probs=146.4

Q ss_pred             cCCcccce-ecccccEEEEEEEEc---CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEE
Q 004020          590 NNFSEENV-LGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL  665 (779)
Q Consensus       590 ~~~~~~~~-lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  665 (779)
                      ++|.+.+. ||+|+||.||+|.++   ++..||||+++... .....++|.+|++++++++|||||++++++.+ +..|+
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc-CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            45666674 999999999999764   35679999997543 44566789999999999999999999999865 56899


Q ss_pred             EEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeecccee
Q 004020          666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL  745 (779)
Q Consensus       666 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  745 (779)
                      ||||+++|+|.+++...+    ..+++..+..++.||++||+|||+   ++|+||||||+||+++.++.+||+|||+|+.
T Consensus        86 vmE~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA  158 (285)
T ss_dssp             EEECCTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEeCCCCcHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhc
Confidence            999999999999875433    258999999999999999999997   8999999999999999999999999999998


Q ss_pred             cCCCCCc-ccccccccCCccccccccccc
Q 004020          746 APDNGKH-SIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       746 ~~~~~~~-~~~~~~~gt~~y~APE~l~~~  773 (779)
                      ....... .......||+.|||||++.+.
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (285)
T d1u59a_         159 LGADDSYYTARSAGKWPLKWYAPECINFR  187 (285)
T ss_dssp             CTTCSCEECCCCSSCCCGGGCCHHHHHHC
T ss_pred             ccccccccccccccccCccccChHHHhCC
Confidence            7654322 222345689999999998654


No 27 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.5e-33  Score=295.95  Aligned_cols=172  Identities=28%  Similarity=0.373  Sum_probs=151.9

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEeccccc-ChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY  667 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  667 (779)
                      ++|++.+.||+|+||.||+|+.+ +|+.||||++..... .....+.+.+|+++++.++|||||++++++.+.+..++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            57999999999999999999875 799999999875432 2234567899999999999999999999999999999999


Q ss_pred             EecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecC
Q 004020          668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP  747 (779)
Q Consensus       668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  747 (779)
                      ||+.+|+|.+++....     .+++..+..++.||+.||.|||+   ++||||||||+|||++.++++||+|||+|+...
T Consensus       121 e~~~~g~l~~~l~~~~-----~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             ccccccchhhhHhhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence            9999999999986543     58999999999999999999996   899999999999999999999999999999875


Q ss_pred             CCCCcccccccccCCcccccccccccC
Q 004020          748 DNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       748 ~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ..     .....||+.|||||++.+..
T Consensus       193 ~~-----~~~~~Gt~~Y~APE~~~~~~  214 (350)
T d1rdqe_         193 GR-----TWTLCGTPEALAPEIILSKG  214 (350)
T ss_dssp             SC-----BCCCEECGGGCCHHHHTTCC
T ss_pred             cc-----cccccCccccCCHHHHcCCC
Confidence            42     23457999999999998754


No 28 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=8.9e-33  Score=283.09  Aligned_cols=174  Identities=28%  Similarity=0.356  Sum_probs=151.7

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccC-------hhHHHHHHHHHHHHHcCC-CCccceEeeEEEe
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-------EKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLD  659 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~  659 (779)
                      .++|++.+.||+|+||+||+|+.. +++.||||++......       +...+.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            478999999999999999999874 7899999998754322       122356889999999997 9999999999999


Q ss_pred             CCeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEe
Q 004020          660 GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD  739 (779)
Q Consensus       660 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D  739 (779)
                      ++..|+||||+++|+|.+++..+.     .+++.++..++.||++||+|||+   ++|+||||||+||+++.++.+||+|
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~D  153 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTD  153 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred             CcceEEEEEcCCCchHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEcc
Confidence            999999999999999999996543     58999999999999999999996   8999999999999999999999999


Q ss_pred             eccceecCCCCCcccccccccCCccccccccccc
Q 004020          740 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       740 FG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      ||+++......   .....+||+.|+|||++.+.
T Consensus       154 FG~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~  184 (277)
T d1phka_         154 FGFSCQLDPGE---KLREVCGTPSYLAPEIIECS  184 (277)
T ss_dssp             CTTCEECCTTC---CBCCCCSCGGGCCHHHHHHH
T ss_pred             chheeEccCCC---ceeeeeccCCCCCHHHhhcc
Confidence            99999875532   22446799999999998753


No 29 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=5.6e-33  Score=296.03  Aligned_cols=177  Identities=25%  Similarity=0.389  Sum_probs=148.8

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChh-HHH---HHHHHHHHHHcCCCCccceEeeEEEeCCeE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEK-GFA---EFKSEIAVLTKVRHRHLVGLLGYCLDGNER  663 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  663 (779)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++.+...... ...   +..+|+++++.++|||||++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            368999999999999999999875 699999999865432211 122   334457778888999999999999999999


Q ss_pred             EEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccc
Q 004020          664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV  743 (779)
Q Consensus       664 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  743 (779)
                      |+||||+++|+|.+++....     .+++..+..++.||+.||+|||+   ++||||||||+|||++.+|.+||+|||+|
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla  154 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA  154 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTC
T ss_pred             EEEEEecCCCcHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeecee
Confidence            99999999999999986543     57889999999999999999996   89999999999999999999999999999


Q ss_pred             eecCCCCCcccccccccCCcccccccccccCCCC
Q 004020          744 RLAPDNGKHSIETRLAGTFGYLAPEYAAETSGMT  777 (779)
Q Consensus       744 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~t  777 (779)
                      +......    ....+||+.|||||++.+...++
T Consensus       155 ~~~~~~~----~~~~~GT~~y~APE~~~~~~~~~  184 (364)
T d1omwa3         155 CDFSKKK----PHASVGTHGYMAPEVLQKGVAYD  184 (364)
T ss_dssp             EECSSSC----CCSCCSCGGGCCHHHHSTTCCCC
T ss_pred             eecCCCc----ccccccccccchhHHhhcCCCCC
Confidence            8775432    23457999999999997655554


No 30 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.98  E-value=2.8e-33  Score=287.83  Aligned_cols=174  Identities=32%  Similarity=0.518  Sum_probs=143.4

Q ss_pred             cCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEEe
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY  669 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  669 (779)
                      ++|++.+.||+|+||.||+|++++++.||||+++....   ..++|.+|+.++++++|||||++++++. .+..++||||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey   92 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   92 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC---CHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEe
Confidence            57999999999999999999999888999999975542   3367999999999999999999999985 4568999999


Q ss_pred             cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCC
Q 004020          670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN  749 (779)
Q Consensus       670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  749 (779)
                      +++|++.+++.....   ..+++.+++.|+.||+.||+|||+   ++|+||||||+|||+++++++||+|||+|+.....
T Consensus        93 ~~~g~l~~~~~~~~~---~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~  166 (285)
T d1fmka3          93 MSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  166 (285)
T ss_dssp             CTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             cCCCchhhhhhhccc---ccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCC
Confidence            999999988866443   258999999999999999999996   89999999999999999999999999999876543


Q ss_pred             CCcccccccccCCcccccccccccC
Q 004020          750 GKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       750 ~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      .. .......||+.|+|||++.+..
T Consensus       167 ~~-~~~~~~~gt~~y~aPE~~~~~~  190 (285)
T d1fmka3         167 EY-TARQGAKFPIKWTAPEAALYGR  190 (285)
T ss_dssp             ----------CCGGGSCHHHHHHCC
T ss_pred             Cc-eeeccccccccccChHHHhCCC
Confidence            22 2234457999999999987543


No 31 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.97  E-value=7.9e-33  Score=288.24  Aligned_cols=189  Identities=32%  Similarity=0.483  Sum_probs=156.5

Q ss_pred             HHHHHHhhcCCcccceecccccEEEEEEEEc------CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEee
Q 004020          582 IQVLRNVTNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLG  655 (779)
Q Consensus       582 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~  655 (779)
                      +.+++...++|++.+.||+|+||.||+|+.+      +++.||||+++... .....+++.+|++++++++||||+++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~   83 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLG   83 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-ChHHHHHHHHHHHHHHhcCCCCccccee
Confidence            3445556788999999999999999999864      35789999987543 3455678999999999999999999999


Q ss_pred             EEEeCCeEEEEEEecCCCChhhHhhhccc-------------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 004020          656 YCLDGNERLLVYEYMPQGTLSRHLFNRKE-------------------EGLKPLEWTRRLTIALDVARGVEYLHGLAHQS  716 (779)
Q Consensus       656 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~  716 (779)
                      ++...+..++||||+++|+|.+++.....                   .....+++..++.|+.|++.||+|||+   ++
T Consensus        84 ~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~  160 (301)
T d1lufa_          84 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RK  160 (301)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CC
Confidence            99999999999999999999999865321                   112347899999999999999999996   89


Q ss_pred             cEEcCCCCCCEEEcCCCcEEEEeeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          717 FIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       717 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ||||||||+|||+|.++++||+|||+|+...............||+.|+|||++.+..
T Consensus       161 ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  218 (301)
T d1lufa_         161 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR  218 (301)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC
T ss_pred             eEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCC
Confidence            9999999999999999999999999998765543333344567899999999987653


No 32 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.5e-32  Score=285.86  Aligned_cols=175  Identities=27%  Similarity=0.443  Sum_probs=149.5

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEeccccc-ChhHHHHHHHHHHHHH-cCCCCccceEeeEEEeCCeEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLT-KVRHRHLVGLLGYCLDGNERLLV  666 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~lv  666 (779)
                      ++|++.+.||+|+||+||+|+.. +++.||||++++... .....+.+.+|..++. .++|||||++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57999999999999999999875 789999999975432 2334456777777765 68999999999999999999999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceec
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA  746 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  746 (779)
                      |||+++|+|.+++....     .+++.++..++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+|+..
T Consensus        82 mEy~~~g~L~~~i~~~~-----~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             EECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EeecCCCcHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhc
Confidence            99999999999996543     47899999999999999999997   89999999999999999999999999999865


Q ss_pred             CCCCCcccccccccCCcccccccccccC
Q 004020          747 PDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       747 ~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ....  .......||+.|+|||++.+..
T Consensus       154 ~~~~--~~~~~~~gt~~y~aPE~~~~~~  179 (320)
T d1xjda_         154 MLGD--AKTNTFCGTPDYIAPEILLGQK  179 (320)
T ss_dssp             CCTT--CCBCCCCSCGGGCCHHHHTTCC
T ss_pred             cccc--ccccccCCCCCcCCHHHHcCCC
Confidence            4432  2234467999999999998754


No 33 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.3e-32  Score=286.20  Aligned_cols=179  Identities=27%  Similarity=0.407  Sum_probs=147.9

Q ss_pred             cCCcccceecccccEEEEEEEE-cCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE  668 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  668 (779)
                      ++|++.+.||+|+||.||+|+. .+++.||||+++.....+...+++.+|++++++++|||||++++++.+++..|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5899999999999999999987 478999999997655444445789999999999999999999999999999999999


Q ss_pred             ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCC
Q 004020          669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD  748 (779)
Q Consensus       669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  748 (779)
                      |+.++ +.+++....   ...+++..+..++.||+.||+|||+   ++||||||||+|||++.++.+||+|||+|+....
T Consensus        82 ~~~~~-~~~~~~~~~---~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_          82 FLHQD-LKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             CCSEE-HHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ecCCc-hhhhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccC
Confidence            99764 444443322   2358999999999999999999996   8999999999999999999999999999987654


Q ss_pred             CCCcccccccccCCcccccccccccCCCC
Q 004020          749 NGKHSIETRLAGTFGYLAPEYAAETSGMT  777 (779)
Q Consensus       749 ~~~~~~~~~~~gt~~y~APE~l~~~~~~t  777 (779)
                      ..  .......||+.|+|||++.....++
T Consensus       155 ~~--~~~~~~~gt~~y~apE~~~~~~~~~  181 (298)
T d1gz8a_         155 PV--RTYTHEVVTLWYRAPEILLGCKYYS  181 (298)
T ss_dssp             CS--BCTTCCBCCCTTCCHHHHTTCSSCC
T ss_pred             Cc--ccceeecccceeeehhhhccccCCC
Confidence            32  2234457999999999987776554


No 34 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.97  E-value=3.3e-32  Score=280.23  Aligned_cols=178  Identities=25%  Similarity=0.414  Sum_probs=144.0

Q ss_pred             hhcCCcccceecccccEEEEEEEE-cCCcEEEEEEecccccC-hhHHHHHHHHHHHHHcCCCCccceEeeEEEeCC----
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----  661 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----  661 (779)
                      +.++|++.+.||+|+||.||+|+. .+++.||||+++..... ....+++.+|++++++++||||+++++++...+    
T Consensus         5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            357899999999999999999986 47999999999765433 345567999999999999999999999998654    


Q ss_pred             eEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeec
Q 004020          662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG  741 (779)
Q Consensus       662 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG  741 (779)
                      ..|+||||+++++|.+++....     .+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.++++|||
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~-----~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~  156 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFG  156 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCT
T ss_pred             eEEEEEECCCCCEehhhhcccC-----CCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhh
Confidence            3789999999999998886543     58999999999999999999996   899999999999999999999999999


Q ss_pred             cceecCCCCC-cccccccccCCccccccccccc
Q 004020          742 LVRLAPDNGK-HSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       742 ~a~~~~~~~~-~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      .++....... .......+||+.|||||++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  189 (277)
T d1o6ya_         157 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGD  189 (277)
T ss_dssp             TCEECC----------------TTCCHHHHTTC
T ss_pred             hhhhhccccccccccccccCcccccCHHHHcCC
Confidence            9876543221 2223456799999999998765


No 35 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.1e-32  Score=287.25  Aligned_cols=174  Identities=29%  Similarity=0.353  Sum_probs=142.0

Q ss_pred             ccceecccccEEEEEEEEc-CCcEEEEEEecccccChh---HHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEEe
Q 004020          594 EENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEK---GFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY  669 (779)
Q Consensus       594 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  669 (779)
                      ..++||+|+||+||+|+.. +|+.||||+++.......   ..+.+.+|+.++++++|||||++++++.+++..|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4578999999999999875 689999999975432221   234688999999999999999999999999999999999


Q ss_pred             cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCC
Q 004020          670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN  749 (779)
Q Consensus       670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  749 (779)
                      ++++++..+....     ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        82 ~~~~~~~~~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_          82 METDLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  153 (299)
T ss_dssp             CSEEHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             hcchHHhhhhhcc-----cCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCC
Confidence            9988776554322     357888999999999999999996   89999999999999999999999999999876543


Q ss_pred             CCcccccccccCCcccccccccccCCCC
Q 004020          750 GKHSIETRLAGTFGYLAPEYAAETSGMT  777 (779)
Q Consensus       750 ~~~~~~~~~~gt~~y~APE~l~~~~~~t  777 (779)
                      ..  .....+||+.|||||++.+...++
T Consensus       154 ~~--~~~~~~gt~~y~aPE~~~~~~~~~  179 (299)
T d1ua2a_         154 NR--AYTHQVVTRWYRAPELLFGARMYG  179 (299)
T ss_dssp             CC--CCCCSCCCCTTCCHHHHTTCSCCC
T ss_pred             cc--cccceecChhhccHHHHccCCCCC
Confidence            22  223457999999999998766554


No 36 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=4.7e-32  Score=284.10  Aligned_cols=174  Identities=21%  Similarity=0.289  Sum_probs=149.8

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEE
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV  666 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  666 (779)
                      +.++|++.+.||+|+||+||+|... +++.||||+++...   .....+.+|++++++++|||||++++++.+++..|+|
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv   79 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            5678999999999999999999875 68899999997643   3345688999999999999999999999999999999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcC--CCcEEEEeeccce
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR  744 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~--~~~~kl~DFG~a~  744 (779)
                      ||||++|+|.+++....    ..+++.++..|+.||+.||+|||+   ++|+||||||+|||++.  ...+||+|||+++
T Consensus        80 mE~~~gg~L~~~i~~~~----~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~  152 (321)
T d1tkia_          80 FEFISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             ECCCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             EecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhh
Confidence            99999999999985432    258999999999999999999996   89999999999999985  4589999999998


Q ss_pred             ecCCCCCcccccccccCCcccccccccccC
Q 004020          745 LAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       745 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ......   ......||+.|+|||.+.+..
T Consensus       153 ~~~~~~---~~~~~~~t~~y~ape~~~~~~  179 (321)
T d1tkia_         153 QLKPGD---NFRLLFTAPEYYAPEVHQHDV  179 (321)
T ss_dssp             ECCTTC---EEEEEESCGGGSCHHHHTTCE
T ss_pred             ccccCC---cccccccccccccchhccCCC
Confidence            765432   223457899999999886543


No 37 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=3.7e-32  Score=285.13  Aligned_cols=176  Identities=31%  Similarity=0.483  Sum_probs=141.8

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCc----EEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGT----KIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL  664 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  664 (779)
                      .+|++.+.||+|+||.||+|++. +|+    +||+|+++... .....+++.+|++++++++|||||++++++.++ ..+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~   86 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   86 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Cee
Confidence            46999999999999999999765 343    68888886543 334567899999999999999999999999865 567


Q ss_pred             EEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccce
Q 004020          665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR  744 (779)
Q Consensus       665 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  744 (779)
                      ++|||+.+|+|.+++....    ..+++..++.++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+|+
T Consensus        87 ~v~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             EEEEeccCCcccccccccc----cCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccce
Confidence            8899999999998876543    368999999999999999999997   799999999999999999999999999999


Q ss_pred             ecCCCCCcccccccccCCcccccccccccC
Q 004020          745 LAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       745 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ...............||+.|||||++.+..
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  189 (317)
T d1xkka_         160 LLGAEEKEYHAEGGKVPIKWMALESILHRI  189 (317)
T ss_dssp             HTTTTCC--------CCTTTSCHHHHHHCC
T ss_pred             ecccccccccccccccCccccChHHHhcCC
Confidence            776544433344557999999999987653


No 38 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=99.97  E-value=3.8e-32  Score=281.35  Aligned_cols=179  Identities=26%  Similarity=0.358  Sum_probs=151.0

Q ss_pred             cCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEEe
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY  669 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  669 (779)
                      ++|++.++||+|+||.||+|+.++|+.||||++......+...+++.+|+.++++++||||+++++++.+.+..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            68999999999999999999999999999999976654444567899999999999999999999999999999999999


Q ss_pred             cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCC
Q 004020          670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN  749 (779)
Q Consensus       670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  749 (779)
                      +.++.+..+....     ..+++..+..++.||+.||+|||+   .+||||||||+|||++.++.+|++|||.|......
T Consensus        82 ~~~~~~~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          82 LDQDLKKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             CSEEHHHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             ehhhhHHHHHhhc-----CCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            9877666554322     358999999999999999999996   89999999999999999999999999999876543


Q ss_pred             CCcccccccccCCcccccccccccCCCCC
Q 004020          750 GKHSIETRLAGTFGYLAPEYAAETSGMTW  778 (779)
Q Consensus       750 ~~~~~~~~~~gt~~y~APE~l~~~~~~t~  778 (779)
                      ..  ......|++.|+|||.+.+...++.
T Consensus       154 ~~--~~~~~~~~~~y~~pE~~~~~~~~~~  180 (286)
T d1ob3a_         154 VR--KYTHEIVTLWYRAPDVLMGSKKYST  180 (286)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCT
T ss_pred             cc--ccceecccchhhhHHHHhCCCCCCc
Confidence            22  2234468999999999987766553


No 39 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=3.3e-32  Score=279.15  Aligned_cols=176  Identities=27%  Similarity=0.364  Sum_probs=147.5

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccCh----hHHHHHHHHHHHHHcCC--CCccceEeeEEEeCC
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVR--HRHLVGLLGYCLDGN  661 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~  661 (779)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.......    ....++.+|+.++++++  |||||++++++.+.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            468999999999999999999875 78999999997543322    12234678999999996  899999999999999


Q ss_pred             eEEEEEEecCC-CChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcC-CCcEEEEe
Q 004020          662 ERLLVYEYMPQ-GTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DMRAKVAD  739 (779)
Q Consensus       662 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-~~~~kl~D  739 (779)
                      ..++||||+.+ +++.+++....     .+++..+..++.||++||+|||+   ++|+||||||+|||++. ++.+||+|
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~-----~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             eEEEEEEeccCcchHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECc
Confidence            99999999976 57777775432     58999999999999999999996   89999999999999985 47999999


Q ss_pred             eccceecCCCCCcccccccccCCcccccccccccCCC
Q 004020          740 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETSGM  776 (779)
Q Consensus       740 FG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~  776 (779)
                      ||+|+.....    ..+...||+.|||||++.+...+
T Consensus       155 FG~a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~  187 (273)
T d1xwsa_         155 FGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYH  187 (273)
T ss_dssp             CTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBC
T ss_pred             cccceecccc----cccccccCCCcCCHHHHcCCCCC
Confidence            9999876432    22456799999999999876544


No 40 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.6e-31  Score=281.62  Aligned_cols=171  Identities=23%  Similarity=0.344  Sum_probs=142.9

Q ss_pred             hhcCCcccc-eecccccEEEEEEEE-cCCcEEEEEEecccccChhHHHHHHHHHHHHHcC-CCCccceEeeEEEe----C
Q 004020          588 VTNNFSEEN-VLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLD----G  660 (779)
Q Consensus       588 ~~~~~~~~~-~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~  660 (779)
                      +.++|.+.+ .||+|+||.||+|+. .+++.||||+++..       ..+.+|++++.++ +|||||+++++|.+    .
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~   81 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGR   81 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCC
Confidence            356898765 699999999999986 47899999998642       3567899987655 79999999999876    3


Q ss_pred             CeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcC---CCcEEE
Q 004020          661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKV  737 (779)
Q Consensus       661 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kl  737 (779)
                      ...|+|||||++|+|.+++..+.   ...+++.++..|+.||+.||+|||+   ++|+||||||+|||+++   .+.+||
T Consensus        82 ~~~~ivmEy~~gg~L~~~i~~~~---~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl  155 (335)
T d2ozaa1          82 KCLLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKL  155 (335)
T ss_dssp             EEEEEEEECCCSEEHHHHHHSCS---CCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEE
T ss_pred             CEEEEEEECCCCCcHHHHHHhcC---CCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccc
Confidence            56899999999999999996542   2368999999999999999999996   89999999999999985   567999


Q ss_pred             EeeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       738 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +|||+|+.......   ....+||+.|||||++.+..
T Consensus       156 ~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  189 (335)
T d2ozaa1         156 TDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEK  189 (335)
T ss_dssp             CCCTTCEECCCCCC---CCCCSCCCSSCCCCCCCGGG
T ss_pred             cccceeeeccCCCc---cccccCCcccCCcHHHcCCC
Confidence            99999987755322   24457999999999987653


No 41 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=7.8e-32  Score=280.76  Aligned_cols=183  Identities=27%  Similarity=0.431  Sum_probs=142.5

Q ss_pred             hhcCCcccceecccccEEEEEEEEc------CCcEEEEEEecccccChhHHHHHHHHHHHHHcC-CCCccceEeeEEEeC
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDG  660 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~  660 (779)
                      ..++|++.+.||+|+||.||+|+..      +++.||||+++... .....+.+.+|...+.++ +|+||+.+++++...
T Consensus        11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            3468999999999999999999764      34689999987543 344556788888888877 689999999988765


Q ss_pred             -CeEEEEEEecCCCChhhHhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEE
Q 004020          661 -NERLLVYEYMPQGTLSRHLFNRKEE-----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL  728 (779)
Q Consensus       661 -~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl  728 (779)
                       +..++|||||++|+|.++++.....           ....+++.++..++.||++||+|||+   ++||||||||+|||
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NIL  166 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNIL  166 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCcccee
Confidence             4689999999999999999765431           12358899999999999999999997   89999999999999


Q ss_pred             EcCCCcEEEEeeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       729 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +++++++||+|||+|+...............||+.|||||++.+..
T Consensus       167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  212 (299)
T d1ywna1         167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV  212 (299)
T ss_dssp             ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCC
T ss_pred             ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCC
Confidence            9999999999999998765544433445567999999999987643


No 42 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.5e-31  Score=278.26  Aligned_cols=175  Identities=27%  Similarity=0.388  Sum_probs=140.8

Q ss_pred             hcCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCC----eEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----ERL  664 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~  664 (779)
                      ..+|...+.||+|+||.||+|+. +|+.||||++....   ......+.|+..+.+++||||+++++++.+.+    ..|
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence            35788899999999999999986 58999999986432   11122334555556789999999999998654    578


Q ss_pred             EEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEcCCCCCCEEEcCCCcEEEEe
Q 004020          665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGL-----AHQSFIHRDLKPSNILLGDDMRAKVAD  739 (779)
Q Consensus       665 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivHrDlkp~NIll~~~~~~kl~D  739 (779)
                      +||||+++|+|.+++++.      .+++..+++++.|++.||+|+|+.     ..++||||||||+||||++++++||+|
T Consensus        78 lv~Ey~~~g~L~~~l~~~------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~D  151 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             EEEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred             EEEecccCCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEe
Confidence            999999999999999643      478999999999999999999963     136999999999999999999999999


Q ss_pred             eccceecCCCCCcc--cccccccCCccccccccccc
Q 004020          740 FGLVRLAPDNGKHS--IETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       740 FG~a~~~~~~~~~~--~~~~~~gt~~y~APE~l~~~  773 (779)
                      ||+++.........  .....+||+.|||||++.+.
T Consensus       152 FGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (303)
T d1vjya_         152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  187 (303)
T ss_dssp             CTTCEEEETTTTEECC----CCSCGGGCCHHHHTTC
T ss_pred             cCccccccCCCcceeccccceecccCcCChhhcccc
Confidence            99998775543221  22346799999999998764


No 43 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=9.6e-32  Score=275.96  Aligned_cols=176  Identities=24%  Similarity=0.393  Sum_probs=137.0

Q ss_pred             hcCCcccceecccccEEEEEEEEcC----CcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL  664 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  664 (779)
                      .++|++.+.||+|+||.||+|++..    +..||||.++... .....+.+.+|++++++++||||+++++++. .+..|
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence            3679999999999999999997642    4568999886543 3455678999999999999999999999985 46789


Q ss_pred             EEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccce
Q 004020          665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR  744 (779)
Q Consensus       665 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  744 (779)
                      +||||+++|++.+++....    ..+++..++.++.||++||+|||+   ++|+||||||+||+++.++.+||+|||+|+
T Consensus        84 iv~E~~~~g~l~~~~~~~~----~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             EEEEeccCCcHHhhhhccC----CCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhhe
Confidence            9999999999998875443    258999999999999999999997   899999999999999999999999999998


Q ss_pred             ecCCCCCcccccccccCCcccccccccccC
Q 004020          745 LAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       745 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ...... ........||+.|+|||++.+..
T Consensus       157 ~~~~~~-~~~~~~~~gt~~y~apE~l~~~~  185 (273)
T d1mp8a_         157 YMEDST-YYKASKGKLPIKWMAPESINFRR  185 (273)
T ss_dssp             ---------------CCGGGCCHHHHHHCC
T ss_pred             eccCCc-ceeccceecCcccchhhHhccCC
Confidence            765432 22234456899999999987543


No 44 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2e-31  Score=278.74  Aligned_cols=182  Identities=29%  Similarity=0.448  Sum_probs=155.1

Q ss_pred             hcCCcccceecccccEEEEEEEEc------CCcEEEEEEecccccChhHHHHHHHHHHHHHcC-CCCccceEeeEEEeCC
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGN  661 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~  661 (779)
                      .++|++.+.||+|+||.||+|++.      +++.||||+++... ......++.+|+.+++++ +|||||++++++.+++
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~  100 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence            368889999999999999999752      46789999997654 344566799999999999 6999999999999999


Q ss_pred             eEEEEEEecCCCChhhHhhhccc-------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEE
Q 004020          662 ERLLVYEYMPQGTLSRHLFNRKE-------------EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL  728 (779)
Q Consensus       662 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl  728 (779)
                      ..++|||||++|+|.++++....             .....+++..+..++.||++||+|||+   ++||||||||+||+
T Consensus       101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NIl  177 (311)
T d1t46a_         101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL  177 (311)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccccccccc
Confidence            99999999999999999976542             122358899999999999999999997   89999999999999


Q ss_pred             EcCCCcEEEEeeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       729 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ++.++.+|++|||.++...............||+.|+|||++.+..
T Consensus       178 ~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  223 (311)
T d1t46a_         178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV  223 (311)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC
T ss_pred             ccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCC
Confidence            9999999999999999876654444455678999999999987543


No 45 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.5e-31  Score=279.15  Aligned_cols=182  Identities=27%  Similarity=0.477  Sum_probs=154.8

Q ss_pred             hcCCcccceecccccEEEEEEEEc------CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCe
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE  662 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  662 (779)
                      .++|++.+.||+|+||.||+|.+.      +++.||||+++... .......+.+|++++++++||||+++++++...+.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc-ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            368889999999999999999763      35789999997543 44556779999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhHhhhccc-----CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEE
Q 004020          663 RLLVYEYMPQGTLSRHLFNRKE-----EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV  737 (779)
Q Consensus       663 ~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl  737 (779)
                      .++||||+++|+|.+++.....     .....+++..+.+++.|+++||.|||+   ++|+||||||+|||+++++++||
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl  174 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  174 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEE
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEE
Confidence            9999999999999999865431     122357899999999999999999997   79999999999999999999999


Q ss_pred             EeeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       738 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +|||+|+...............||+.|+|||.+.+..
T Consensus       175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~  211 (308)
T d1p4oa_         175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV  211 (308)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC
T ss_pred             eecccceeccCCcceeeccceecccccCCHHHHccCC
Confidence            9999998775544434445557999999999987654


No 46 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.3e-31  Score=271.99  Aligned_cols=169  Identities=35%  Similarity=0.552  Sum_probs=138.6

Q ss_pred             cCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeC-CeEEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-NERLLVYE  668 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e  668 (779)
                      ++|++.+.||+|+||.||+|+++ |..||||+++...    ..+++.+|++++++++||||+++++++.+. +..++|||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            56888999999999999999985 7899999996542    346789999999999999999999998654 56899999


Q ss_pred             ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCC
Q 004020          669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD  748 (779)
Q Consensus       669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  748 (779)
                      |+++|+|.+++..+..   ..+++..+++|+.||+.||+|||+   .+|+||||||+||+++.++.+||+|||+++....
T Consensus        82 y~~~g~L~~~l~~~~~---~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_          82 YMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             CCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             ccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCC
Confidence            9999999999976532   247999999999999999999997   8999999999999999999999999999987543


Q ss_pred             CCCcccccccccCCcccccccccccC
Q 004020          749 NGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       749 ~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      .     .....+|+.|+|||++.+..
T Consensus       156 ~-----~~~~~~~~~y~aPE~l~~~~  176 (262)
T d1byga_         156 T-----QDTGKLPVKWTAPEALREKK  176 (262)
T ss_dssp             -----------CCTTTSCHHHHHHCC
T ss_pred             C-----CccccccccCCChHHHhCCC
Confidence            2     22346889999999987653


No 47 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.2e-31  Score=272.37  Aligned_cols=177  Identities=31%  Similarity=0.511  Sum_probs=137.8

Q ss_pred             cCCcccceecccccEEEEEEEEcC----CcEEEEEEecccccC-hhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL  664 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  664 (779)
                      ++|++.+.||+|+||.||+|+...    ...||||+++..... +...++|.+|++++++++||||+++++++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            579999999999999999997642    247899998765432 3445789999999999999999999999975 4678


Q ss_pred             EEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccce
Q 004020          665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR  744 (779)
Q Consensus       665 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  744 (779)
                      +||||+++|++.+++..+..    .+++..++.++.||+.||+|||+   ++|+||||||+||+++.++.+||+|||+++
T Consensus        87 lv~e~~~~~~l~~~~~~~~~----~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~  159 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR  159 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             eeeeeecCcchhhhhhcccC----CCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhh
Confidence            99999999999998865542    58999999999999999999997   899999999999999999999999999999


Q ss_pred             ecCCCCCccc-ccccccCCcccccccccccC
Q 004020          745 LAPDNGKHSI-ETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       745 ~~~~~~~~~~-~~~~~gt~~y~APE~l~~~~  774 (779)
                      .......... .....|+..|+|||++.+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  190 (273)
T d1u46a_         160 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRT  190 (273)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCE
T ss_pred             hcccCCCcceecCccccCcccCCHHHHhCCC
Confidence            8755433222 23446888999999987643


No 48 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=3.5e-31  Score=275.21  Aligned_cols=181  Identities=31%  Similarity=0.471  Sum_probs=149.1

Q ss_pred             hcCCcccceecccccEEEEEEEEcC--------CcEEEEEEecccccChhHHHHHHHHHHHHHcC-CCCccceEeeEEEe
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELHD--------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLD  659 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~  659 (779)
                      .++|++.+.||+|+||.||+|+...        +..||||+++... ......++.+|...+.++ +|||||++++++.+
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc-ChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            4688999999999999999997532        3479999997654 445567889999999888 79999999999999


Q ss_pred             CCeEEEEEEecCCCChhhHhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEE
Q 004020          660 GNERLLVYEYMPQGTLSRHLFNRKEE-----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL  728 (779)
Q Consensus       660 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIl  728 (779)
                      ++..++||||+++|+|.+++..+...           ....+++.+++.++.||+.||+|||+   ++||||||||+|||
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiL  167 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  167 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeeccccee
Confidence            99999999999999999999765422           13468999999999999999999997   89999999999999


Q ss_pred             EcCCCcEEEEeeccceecCCCCCcccccccccCCccccccccccc
Q 004020          729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       729 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      ++.++.+||+|||+++...............||+.|+|||++.+.
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~  212 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR  212 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHC
T ss_pred             ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCC
Confidence            999999999999999877654444444556799999999998764


No 49 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=5.2e-31  Score=275.27  Aligned_cols=177  Identities=36%  Similarity=0.548  Sum_probs=144.0

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCc--EEEEEEecccccChhHHHHHHHHHHHHHcC-CCCccceEeeEEEeCCeEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGT--KIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLL  665 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l  665 (779)
                      ++|++.++||+|+||.||+|+++ ++.  .||||++.... .....+++.+|+++++++ +|||||++++++.+.+..++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc-ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            67889999999999999999875 444  46788775433 234556799999999999 79999999999999999999


Q ss_pred             EEEecCCCChhhHhhhcc-----------cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCc
Q 004020          666 VYEYMPQGTLSRHLFNRK-----------EEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR  734 (779)
Q Consensus       666 v~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~  734 (779)
                      ||||+++|+|.++++...           ......+++..+.+++.||++||.|+|+   ++|+||||||+|||++.++.
T Consensus        89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~  165 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  165 (309)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred             EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCc
Confidence            999999999999996542           1223468999999999999999999997   89999999999999999999


Q ss_pred             EEEEeeccceecCCCCCcccccccccCCccccccccccc
Q 004020          735 AKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       735 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      +||+|||+|+......   ......||..|+|||.+.+.
T Consensus       166 ~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~  201 (309)
T d1fvra_         166 AKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYS  201 (309)
T ss_dssp             EEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHC
T ss_pred             eEEccccccccccccc---cccceecCCcccchHHhccC
Confidence            9999999998654321   12344689999999998654


No 50 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=9.3e-31  Score=278.52  Aligned_cols=176  Identities=28%  Similarity=0.419  Sum_probs=145.8

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCC-----
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN-----  661 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----  661 (779)
                      +.++|++.+.||+|+||.||+|+.. +|+.||||+++.....+...+.+.+|++++++++|||||+++++|...+     
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            4578999999999999999999865 6999999999876666666788999999999999999999999998664     


Q ss_pred             -eEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEee
Q 004020          662 -ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF  740 (779)
Q Consensus       662 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DF  740 (779)
                       ..|+||||+ +.++..+....      .+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+|++||
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Df  165 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDF  165 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred             ceEEEEEecc-cccHHHHHHhc------cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccc
Confidence             469999999 56777766432      48999999999999999999996   89999999999999999999999999


Q ss_pred             ccceecCCCCCcccccccccCCcccccccccccCCCCC
Q 004020          741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETSGMTW  778 (779)
Q Consensus       741 G~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~t~  778 (779)
                      |+|+.....     .+...||+.|+|||++.+...++.
T Consensus       166 g~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~  198 (346)
T d1cm8a_         166 GLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQ  198 (346)
T ss_dssp             TTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCT
T ss_pred             cceeccCCc-----cccccccccccCHHHHcCCCCCCc
Confidence            999876442     244579999999999987655543


No 51 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97  E-value=1.4e-30  Score=273.66  Aligned_cols=232  Identities=27%  Similarity=0.451  Sum_probs=182.9

Q ss_pred             ccCCCCccEEEccc-CCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccC
Q 004020          132 FKGLTSLQTISLDY-NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKS  210 (779)
Q Consensus       132 ~~~l~~L~~L~Ls~-N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~  210 (779)
                      +.+|++|++|+|++ |++.+ .+|..|+++++|++|+|++|++++..+..+.  .+..|+++++++|++.+.+|..++  
T Consensus        72 l~~L~~L~~L~Ls~~N~l~g-~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~--~~~~L~~l~l~~N~~~~~~p~~l~--  146 (313)
T d1ogqa_          72 LANLPYLNFLYIGGINNLVG-PIPPAIAKLTQLHYLYITHTNVSGAIPDFLS--QIKTLVTLDFSYNALSGTLPPSIS--  146 (313)
T ss_dssp             GGGCTTCSEEEEEEETTEES-CCCGGGGGCTTCSEEEEEEECCEEECCGGGG--GCTTCCEEECCSSEEESCCCGGGG--
T ss_pred             HhcCcccccccccccccccc-ccccccccccccchhhhcccccccccccccc--chhhhcccccccccccccCchhhc--
Confidence            44455555555543 45543 4566666666666666666666777776665  677888888888888877777665  


Q ss_pred             CcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCC-CCCCCCC-cEEEccCCccccccChhhhCCCCCCE
Q 004020          211 SIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSL-QDFSVRDNQLTGIVPSSLVNLHSLAV  288 (779)
Q Consensus       211 ~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L-~~L~l~~N~l~~~~p~~l~~l~~L~~  288 (779)
                                              .++.|+.+++++|.+++.+|+ +..+.++ +.+++++|++++..|..+.++..+ .
T Consensus       147 ------------------------~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~  201 (313)
T d1ogqa_         147 ------------------------SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-F  201 (313)
T ss_dssp             ------------------------GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-E
T ss_pred             ------------------------cCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence                                    578888899999998887774 6676665 899999999999999999888654 7


Q ss_pred             EEccCccccccCCCCCCCcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCC
Q 004020          289 VNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDA  368 (779)
Q Consensus       289 L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (779)
                      +++++|.+.|.+|.....                                                              
T Consensus       202 l~l~~~~~~~~~~~~~~~--------------------------------------------------------------  219 (313)
T d1ogqa_         202 VDLSRNMLEGDASVLFGS--------------------------------------------------------------  219 (313)
T ss_dssp             EECCSSEEEECCGGGCCT--------------------------------------------------------------
T ss_pred             cccccccccccccccccc--------------------------------------------------------------
Confidence            999999999888753221                                                              


Q ss_pred             CCCeEEEEccCccccccccccccccccCCeEeccCccccccCCccCCCCCCCCceeccCCcccccCCCCCC---cceeee
Q 004020          369 GGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQ---NVIVKT  445 (779)
Q Consensus       369 ~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~~---~~~~~~  445 (779)
                      ..+++.+++++|.+++.+| .++.+++|++|+|++|+|+|.+|..++.+++|++|||++|+|+|.||.+..   ...+.+
T Consensus       220 ~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l  298 (313)
T d1ogqa_         220 DKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY  298 (313)
T ss_dssp             TSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGT
T ss_pred             ccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHh
Confidence            2378899999999998776 689999999999999999999999999999999999999999999998643   335667


Q ss_pred             CCCCCCCCCCC
Q 004020          446 DGNPDIGKDSS  456 (779)
Q Consensus       446 ~~n~~~~~~~~  456 (779)
                      .+|+.+|+.|.
T Consensus       299 ~~N~~l~g~pl  309 (313)
T d1ogqa_         299 ANNKCLCGSPL  309 (313)
T ss_dssp             CSSSEEESTTS
T ss_pred             CCCccccCCCC
Confidence            89999999764


No 52 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.6e-30  Score=269.49  Aligned_cols=172  Identities=31%  Similarity=0.504  Sum_probs=143.6

Q ss_pred             cceecccccEEEEEEEEcC----CcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeC-CeEEEEEEe
Q 004020          595 ENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-NERLLVYEY  669 (779)
Q Consensus       595 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~  669 (779)
                      .++||+|+||+||+|++..    ...||||+++... .....++|.+|++++++++||||+++++++... +..++||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            4789999999999998753    2368999987432 455678899999999999999999999998764 588999999


Q ss_pred             cCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCCC
Q 004020          670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN  749 (779)
Q Consensus       670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  749 (779)
                      |++|+|.+++....    ...++..+++++.|+++||.|+|+   .+|+||||||+|||+++++.+||+|||+++.....
T Consensus       111 ~~~g~l~~~~~~~~----~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         111 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTT
T ss_pred             eecCchhhhhcccc----ccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccc
Confidence            99999999886543    246788899999999999999996   89999999999999999999999999999876543


Q ss_pred             CCc--ccccccccCCcccccccccccC
Q 004020          750 GKH--SIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       750 ~~~--~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      ...  .......||+.|+|||++.+..
T Consensus       184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~  210 (311)
T d1r0pa_         184 EFDSVHNKTGAKLPVKWMALESLQTQK  210 (311)
T ss_dssp             TCCCTTCTTCSSCCGGGSCHHHHHHCC
T ss_pred             ccccceecccccccccccChHHHhcCC
Confidence            222  1223457899999999987543


No 53 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.7e-30  Score=273.38  Aligned_cols=182  Identities=24%  Similarity=0.336  Sum_probs=146.4

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeC-------
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-------  660 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------  660 (779)
                      .++|++.+.||+|+||+||+|+.. +|+.||||++......+....++.+|++++++++||||+++++++...       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            468999999999999999999874 799999999876655555567789999999999999999999988653       


Q ss_pred             -CeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEe
Q 004020          661 -NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD  739 (779)
Q Consensus       661 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~D  739 (779)
                       +..|+||||++++.+......     ...+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~-----~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~d  160 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD  160 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECC
T ss_pred             CceEEEEEeccCCCccchhhhc-----ccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeee
Confidence             457999999988766544322     2357889999999999999999996   8999999999999999999999999


Q ss_pred             eccceecCCCCCc--ccccccccCCcccccccccccCCCCC
Q 004020          740 FGLVRLAPDNGKH--SIETRLAGTFGYLAPEYAAETSGMTW  778 (779)
Q Consensus       740 FG~a~~~~~~~~~--~~~~~~~gt~~y~APE~l~~~~~~t~  778 (779)
                      ||+++........  ......+||+.|+|||++.+..+++.
T Consensus       161 fg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~  201 (318)
T d3blha1         161 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP  201 (318)
T ss_dssp             CTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCT
T ss_pred             cceeeecccccccccccccceecCHHHhhHHHHcCCCCCCc
Confidence            9999876543221  12233579999999999988766654


No 54 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=3.6e-30  Score=273.40  Aligned_cols=180  Identities=26%  Similarity=0.421  Sum_probs=145.7

Q ss_pred             hhcCCcccceecccccEEEEEEEE-cCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCC----e
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----E  662 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~  662 (779)
                      +.++|++.+.||+|+||+||+|+. .+|+.||||++.... .....+++.+|++++++++||||+++++++....    .
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            346799999999999999999976 479999999997543 3445678899999999999999999999997653    2


Q ss_pred             EEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeecc
Q 004020          663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL  742 (779)
Q Consensus       663 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~  742 (779)
                      .+++++|+.+|+|.+++..+      .+++..+..++.||+.||+|||+   ++||||||||+|||++.++.+||+|||+
T Consensus        85 ~~~l~~~~~~g~L~~~l~~~------~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~  155 (345)
T d1pmea_          85 DVYLVTHLMGADLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL  155 (345)
T ss_dssp             CEEEEEECCCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEeecCCchhhhhhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCc
Confidence            35555667799999998543      48999999999999999999996   8999999999999999999999999999


Q ss_pred             ceecCCCCCc-ccccccccCCcccccccccccCCCC
Q 004020          743 VRLAPDNGKH-SIETRLAGTFGYLAPEYAAETSGMT  777 (779)
Q Consensus       743 a~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~t  777 (779)
                      |+........ ......+||+.|+|||++.....++
T Consensus       156 a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  191 (345)
T d1pmea_         156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT  191 (345)
T ss_dssp             CEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCS
T ss_pred             eeeccCCCccceeeccccccceechHHHhhcCCCCC
Confidence            9876443221 1234467999999999987765544


No 55 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=7e-30  Score=265.35  Aligned_cols=178  Identities=22%  Similarity=0.321  Sum_probs=154.7

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeCCeEEEEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE  668 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  668 (779)
                      ++|++.+.||+|+||+||+|+.. +++.||||+++..........++.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            58999999999999999999874 78999999997665555667889999999999999999999999999999999999


Q ss_pred             ecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeeccceecCC
Q 004020          669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD  748 (779)
Q Consensus       669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  748 (779)
                      ++.++++..++...     ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||.|+....
T Consensus        82 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_          82 FCDQDLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSEEHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eccccccccccccc-----cccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccC
Confidence            99999888776443     257889999999999999999996   8999999999999999999999999999987755


Q ss_pred             CCCcccccccccCCcccccccccccCCCC
Q 004020          749 NGKHSIETRLAGTFGYLAPEYAAETSGMT  777 (779)
Q Consensus       749 ~~~~~~~~~~~gt~~y~APE~l~~~~~~t  777 (779)
                      ...  ......+++.|+|||++.+...++
T Consensus       154 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~  180 (292)
T d1unla_         154 PVR--CYSAEVVTLWYRPPDVLFGAKLYS  180 (292)
T ss_dssp             CCS--CCCSCCSCGGGCCHHHHTTCSCCC
T ss_pred             CCc--cceeeccccchhhhhHhccCCCCC
Confidence            332  223446789999999998776554


No 56 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=99.96  E-value=6.9e-30  Score=269.72  Aligned_cols=169  Identities=19%  Similarity=0.347  Sum_probs=144.2

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCC-CCccceEeeEEEeC--CeEEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDG--NERLL  665 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~l  665 (779)
                      ++|++.+.||+|+||+||+|+.. +++.||||+++..     ..+++.+|+++++++. ||||+++++++...  ...++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            58999999999999999999874 7899999998643     2357889999999995 99999999999854  56899


Q ss_pred             EEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCC-cEEEEeeccce
Q 004020          666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVR  744 (779)
Q Consensus       666 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~  744 (779)
                      ||||+++++|..+.        +.+++..+..++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+|+
T Consensus       110 v~e~~~~~~L~~~~--------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~  178 (328)
T d3bqca1         110 VFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  178 (328)
T ss_dssp             EEECCCSCBGGGTT--------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred             EEeecCCCcHHHHh--------cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccce
Confidence            99999999987653        258899999999999999999997   8999999999999998654 69999999998


Q ss_pred             ecCCCCCcccccccccCCcccccccccccCCCC
Q 004020          745 LAPDNGKHSIETRLAGTFGYLAPEYAAETSGMT  777 (779)
Q Consensus       745 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~t  777 (779)
                      .......   ....+||+.|+|||.+.+...++
T Consensus       179 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~  208 (328)
T d3bqca1         179 FYHPGQE---YNVRVASRYFKGPELLVDYQMYD  208 (328)
T ss_dssp             ECCTTCC---CCSCCSCGGGCCHHHHTTCCCCC
T ss_pred             eccCCCc---ccccccCccccCcccccCCCCCC
Confidence            7754322   24457999999999998776554


No 57 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=3e-30  Score=274.63  Aligned_cols=174  Identities=24%  Similarity=0.372  Sum_probs=140.3

Q ss_pred             CCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeC------CeE
Q 004020          591 NFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG------NER  663 (779)
Q Consensus       591 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~  663 (779)
                      +|+..++||+|+||+||+|+.. +++.||||++.....      ...+|++++++++||||++++++|...      .+.
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            5888899999999999999875 699999999865431      234799999999999999999998653      246


Q ss_pred             EEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCC-cEEEEeecc
Q 004020          664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGL  742 (779)
Q Consensus       664 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~-~~kl~DFG~  742 (779)
                      ++||||++++.+. .+..... ....+++.++..++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+
T Consensus        95 ~lv~Ey~~~~~~~-~l~~~~~-~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~  169 (350)
T d1q5ka_          95 NLVLDYVPETVYR-VARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGS  169 (350)
T ss_dssp             EEEEECCSEEHHH-HHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred             EEEEeccCCccHH-HHHhhhh-ccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccc
Confidence            8999999865443 3332221 22368999999999999999999996   8999999999999999775 899999999


Q ss_pred             ceecCCCCCcccccccccCCcccccccccccCCCCC
Q 004020          743 VRLAPDNGKHSIETRLAGTFGYLAPEYAAETSGMTW  778 (779)
Q Consensus       743 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~t~  778 (779)
                      ++......   .....+||+.|+|||.+.+...++.
T Consensus       170 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~  202 (350)
T d1q5ka_         170 AKQLVRGE---PNVSYICSRYYRAPELIFGATDYTS  202 (350)
T ss_dssp             CEECCTTS---CCCSCCSCTTSCCHHHHTTCSSCCT
T ss_pred             hhhccCCc---ccccccccccccChHHhhcccCCCc
Confidence            98765432   2234579999999999887666553


No 58 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=2.7e-30  Score=270.15  Aligned_cols=176  Identities=28%  Similarity=0.387  Sum_probs=141.3

Q ss_pred             hcCCcccceecccccEEEEEEEEc-C-CcEEEEEEecccccChhHHHHHHHHHHHHHcC---CCCccceEeeEEEe----
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-D-GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV---RHRHLVGLLGYCLD----  659 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~----  659 (779)
                      .++|++.+.||+|+||+||+|+.. + ++.||||+++.....+.....+.+|+.+++.+   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            478999999999999999999874 4 56799999976544333334566777777665   79999999999863    


Q ss_pred             -CCeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEE
Q 004020          660 -GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA  738 (779)
Q Consensus       660 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~  738 (779)
                       ....+++|||++++.+.......    ...+++..+..++.|++.||+|||+   ++||||||||+|||++.++.+||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~  158 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLA  158 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSC----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCceEEEEEEeccCCchhhhhhcc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeec
Confidence             24678999999987765443222    2358899999999999999999996   899999999999999999999999


Q ss_pred             eeccceecCCCCCcccccccccCCcccccccccccC
Q 004020          739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       739 DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      |||+++.....   .......||+.|||||++.+..
T Consensus       159 dfg~~~~~~~~---~~~~~~~gT~~Y~APE~~~~~~  191 (305)
T d1blxa_         159 DFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSS  191 (305)
T ss_dssp             SCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCC
T ss_pred             chhhhhhhccc---ccCCCcccChhhcCcchhcCCC
Confidence            99998765332   2334567999999999987653


No 59 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.96  E-value=2.3e-29  Score=260.54  Aligned_cols=174  Identities=20%  Similarity=0.313  Sum_probs=144.6

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCC-CccceEeeEEEeCCeEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH-RHLVGLLGYCLDGNERLLV  666 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv  666 (779)
                      .++|++.+.||+|+||+||+|+.. +++.||||++....    ....+.+|++.++.+.| +|++.+++++..+...++|
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v   79 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   79 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc----CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEE
Confidence            468999999999999999999865 68999999875433    12346789999999975 8999999999999999999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcC-----CCcEEEEeec
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFG  741 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~-----~~~~kl~DFG  741 (779)
                      |||+ +++|.+++....    ..+++.++..++.|++.||+|||+   ++|+||||||+||+++.     ++.+||+|||
T Consensus        80 me~~-~~~l~~~~~~~~----~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          80 IDLL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             EECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             EEec-CCCHHHHHHhhc----cchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccc
Confidence            9999 679988875433    258899999999999999999995   89999999999999974     5789999999


Q ss_pred             cceecCCCCCc-----ccccccccCCcccccccccccC
Q 004020          742 LVRLAPDNGKH-----SIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       742 ~a~~~~~~~~~-----~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +|+........     ......+||+.|||||++.+..
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~  189 (293)
T d1csna_         152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE  189 (293)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC
T ss_pred             eeEEcccCccccceeecccCceEEchhhcCHHHhcCCC
Confidence            99976543211     1223467999999999998753


No 60 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.9e-29  Score=268.91  Aligned_cols=177  Identities=25%  Similarity=0.378  Sum_probs=147.4

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeC-----C
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-----N  661 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~  661 (779)
                      +.++|++.+.||+|+||+||+|+.. +|+.||||++.....+....+++.+|++++++++|||||++++++...     .
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            3578999999999999999999864 799999999987665666677899999999999999999999998643     3


Q ss_pred             eEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeec
Q 004020          662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG  741 (779)
Q Consensus       662 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG  741 (779)
                      ..+++|+|+.+|+|.+++..+      .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+|++|||
T Consensus        96 ~~~~i~~~~~gg~L~~~~~~~------~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg  166 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG  166 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC-
T ss_pred             ceEEEEEeecCCchhhhcccc------cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccc
Confidence            446777888899999988432      48999999999999999999996   899999999999999999999999999


Q ss_pred             cceecCCCCCcccccccccCCcccccccccccCCCCC
Q 004020          742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAAETSGMTW  778 (779)
Q Consensus       742 ~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~t~  778 (779)
                      .+.....     ......||+.|+|||++.+...++.
T Consensus       167 ~a~~~~~-----~~~~~~g~~~y~apE~~~~~~~~~~  198 (348)
T d2gfsa1         167 LARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQ  198 (348)
T ss_dssp             ---CCTG-----GGSSSCHHHHTSCHHHHTTCSCCCT
T ss_pred             hhcccCc-----ccccccccccccCchhhcCCccCCc
Confidence            9876532     2234579999999999887665543


No 61 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=4e-29  Score=266.39  Aligned_cols=172  Identities=26%  Similarity=0.355  Sum_probs=137.1

Q ss_pred             hhcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccceEeeEEEeC------
Q 004020          588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG------  660 (779)
Q Consensus       588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------  660 (779)
                      +.++|++.++||+|+||+||+|++. +|+.||||++..........+++.+|+.++++++||||++++++|...      
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence            3468999999999999999999875 699999999987766666677899999999999999999999999643      


Q ss_pred             CeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEee
Q 004020          661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF  740 (779)
Q Consensus       661 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DF  740 (779)
                      ...|+||||+.++.+ +.+.       ..+++..++.++.||+.||+|||+   +||+||||||+|||++.++.+|++||
T Consensus        95 ~~~~iv~Ey~~~~l~-~~~~-------~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df  163 (355)
T d2b1pa1          95 QDVYLVMELMDANLC-QVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF  163 (355)
T ss_dssp             CEEEEEEECCSEEHH-HHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             ceeEEEEeccchHHH-Hhhh-------cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeech
Confidence            578999999976544 4432       247899999999999999999997   89999999999999999999999999


Q ss_pred             ccceecCCCCCcccccccccCCccccccccccc
Q 004020          741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       741 G~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                      |+++......   ......||+.|+|||++.+.
T Consensus       164 ~~~~~~~~~~---~~~~~~~t~~y~aPE~l~~~  193 (355)
T d2b1pa1         164 GLARTAGTSF---MMTPYVVTRYYRAPEVILGM  193 (355)
T ss_dssp             CC------------------CCTTCCHHHHTTC
T ss_pred             hhhhcccccc---ccccccccccccChhhhcCC
Confidence            9987664432   23455799999999999875


No 62 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.6e-29  Score=264.86  Aligned_cols=176  Identities=27%  Similarity=0.369  Sum_probs=149.2

Q ss_pred             cCCcccceecccccEEEEEEEEc----CCcEEEEEEeccccc--ChhHHHHHHHHHHHHHcCCC-CccceEeeEEEeCCe
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVV--SEKGFAEFKSEIAVLTKVRH-RHLVGLLGYCLDGNE  662 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~  662 (779)
                      ++|++.+.||+|+||+||+|+..    +|+.||||+++....  .....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            57999999999999999999752    588999999976532  12234568899999999976 899999999999999


Q ss_pred             EEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcEEEEeecc
Q 004020          663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL  742 (779)
Q Consensus       663 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~  742 (779)
                      .++||||+.+|+|.+++....     .+.+..+..++.||+.||+|+|+   .+|+||||||+||+++.++.+||+|||+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~-----~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~  175 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL  175 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred             eeeeeecccccHHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccc
Confidence            999999999999999986554     46788899999999999999996   8999999999999999999999999999


Q ss_pred             ceecCCCCCcccccccccCCcccccccccccC
Q 004020          743 VRLAPDNGKHSIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       743 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      |+...... ........|++.|+|||.+.+..
T Consensus       176 a~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~  206 (322)
T d1vzoa_         176 SKEFVADE-TERAYDFCGTIEYMAPDIVRGGD  206 (322)
T ss_dssp             EEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC
T ss_pred             hhhhcccc-cccccccccccccchhHHhhcCC
Confidence            98765432 22234457999999999997543


No 63 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.95  E-value=2.4e-28  Score=254.23  Aligned_cols=174  Identities=23%  Similarity=0.345  Sum_probs=139.1

Q ss_pred             hcCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCcc-ceEeeEEEeCCeEEEE
Q 004020          589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHL-VGLLGYCLDGNERLLV  666 (779)
Q Consensus       589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv  666 (779)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....    ..+++.+|+++++.++|+++ +.+.+++.+.+..++|
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~----~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~iv   81 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   81 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT----TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc----cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEE
Confidence            467999999999999999999864 68999999876543    22357889999999987665 5556666778889999


Q ss_pred             EEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcC---CCcEEEEeeccc
Q 004020          667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLV  743 (779)
Q Consensus       667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~---~~~~kl~DFG~a  743 (779)
                      |||+. +++.+.+....    ..+++..+..++.|++.||+|||+   ++|+||||||+||+++.   +..+||+|||+|
T Consensus        82 me~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a  153 (299)
T d1ckia_          82 MELLG-PSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  153 (299)
T ss_dssp             EECCC-CBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSC
T ss_pred             EEEcC-Cchhhhhhhcc----CCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcc
Confidence            99995 56666654332    258999999999999999999997   89999999999999863   557999999999


Q ss_pred             eecCCCCCc-----ccccccccCCcccccccccccC
Q 004020          744 RLAPDNGKH-----SIETRLAGTFGYLAPEYAAETS  774 (779)
Q Consensus       744 ~~~~~~~~~-----~~~~~~~gt~~y~APE~l~~~~  774 (779)
                      +........     .......||+.|||||++.+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  189 (299)
T d1ckia_         154 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIE  189 (299)
T ss_dssp             EECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBC
T ss_pred             eeccccccccceeccccCCcCCCccccCHHHHhCCC
Confidence            987553321     1223457999999999988754


No 64 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94  E-value=9.6e-26  Score=235.39  Aligned_cols=272  Identities=20%  Similarity=0.303  Sum_probs=207.7

Q ss_pred             CcceeeEeCCCCcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCC-CCCCCCCccEEecCCCCCCCCCcccc
Q 004020           54 CKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFF  132 (779)
Q Consensus        54 C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~  132 (779)
                      |.|.+|.|+           +++++ .+|..+.  ++|++|+|++|+|+.+++ +|.++++|++|++++|.++.+++..|
T Consensus        10 c~~~~~~C~-----------~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f   75 (305)
T d1xkua_          10 CHLRVVQCS-----------DLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF   75 (305)
T ss_dssp             EETTEEECT-----------TSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTT
T ss_pred             ecCCEEEec-----------CCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhh
Confidence            567777776           35566 6777764  689999999999998887 79999999999999999999999999


Q ss_pred             cCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCc
Q 004020          133 KGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSI  212 (779)
Q Consensus       133 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L  212 (779)
                      .++++|++|++++|+++.  +|..+  ...+..|++.+|.+.+..+..+.  ....+..++...|......         
T Consensus        76 ~~l~~L~~L~l~~n~l~~--l~~~~--~~~l~~L~~~~n~l~~l~~~~~~--~~~~~~~l~~~~n~~~~~~---------  140 (305)
T d1xkua_          76 APLVKLERLYLSKNQLKE--LPEKM--PKTLQELRVHENEITKVRKSVFN--GLNQMIVVELGTNPLKSSG---------  140 (305)
T ss_dssp             TTCTTCCEEECCSSCCSB--CCSSC--CTTCCEEECCSSCCCBBCHHHHT--TCTTCCEEECCSSCCCGGG---------
T ss_pred             hCCCccCEecccCCccCc--Cccch--hhhhhhhhccccchhhhhhhhhh--ccccccccccccccccccC---------
Confidence            999999999999999875  44332  34566677777776644433332  3455556666665543111         


Q ss_pred             ceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEcc
Q 004020          213 QTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLT  292 (779)
Q Consensus       213 ~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls  292 (779)
                                     .....+..+++|+.+++++|.++..+..+  +++|+.|++++|.+.+..+..+..++.++.|+++
T Consensus       141 ---------------~~~~~~~~l~~L~~l~l~~n~l~~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s  203 (305)
T d1xkua_         141 ---------------IENGAFQGMKKLSYIRIADTNITTIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLS  203 (305)
T ss_dssp             ---------------BCTTGGGGCTTCCEEECCSSCCCSCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECC
T ss_pred             ---------------CCccccccccccCccccccCCccccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccc
Confidence                           11123456889999999999998654333  5899999999999999999999999999999999


Q ss_pred             CccccccCCCCCCCcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCe
Q 004020          293 NNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNI  372 (779)
Q Consensus       293 ~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  372 (779)
                      +|.+++..+.++..                                                              .++|
T Consensus       204 ~n~l~~~~~~~~~~--------------------------------------------------------------l~~L  221 (305)
T d1xkua_         204 FNSISAVDNGSLAN--------------------------------------------------------------TPHL  221 (305)
T ss_dssp             SSCCCEECTTTGGG--------------------------------------------------------------STTC
T ss_pred             cccccccccccccc--------------------------------------------------------------cccc
Confidence            99998776653221                                                              2378


Q ss_pred             EEEEccCccccccccccccccccCCeEeccCccccccCCc-------cCCCCCCCCceeccCCccc-ccCC
Q 004020          373 TVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPK-------ELTTLPSLEMLDVSNNHLF-GKVP  435 (779)
Q Consensus       373 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~-------~l~~l~~L~~L~Ls~N~l~-g~iP  435 (779)
                      ++|+|++|+|+ .+|.+|.++++|++|+|++|+|+ .|+.       .+..+.+|+.|+|++|+++ ..+|
T Consensus       222 ~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~  290 (305)
T d1xkua_         222 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQ  290 (305)
T ss_dssp             CEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSC
T ss_pred             eeeeccccccc-ccccccccccCCCEEECCCCccC-ccChhhccCcchhcccCCCCEEECCCCcCccCcCC
Confidence            99999999998 57889999999999999999999 5543       2345788999999999885 4554


No 65 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94  E-value=7.9e-26  Score=244.08  Aligned_cols=285  Identities=26%  Similarity=0.395  Sum_probs=202.4

Q ss_pred             CCcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEc
Q 004020           64 SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL  143 (779)
Q Consensus        64 ~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L  143 (779)
                      -..+++|++++++|+. + +.+..+++|++|+|++|+|++.++ ++++++|++|++++|+++.+++  +..+++|+.|++
T Consensus        43 l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L~~  117 (384)
T d2omza2          43 LDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL  117 (384)
T ss_dssp             HTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred             hCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCCcc-ccCCcccccccccccccccccc--cccccccccccc
Confidence            3479999999999984 4 468899999999999999997654 9999999999999999999875  889999999999


Q ss_pred             ccCCCCCCCCcccccCCCCCceEeccCceeEee-----------------------------------------cCCCcc
Q 004020          144 DYNSFDSWVIPESLKDATGLQRFSANGANITGT-----------------------------------------IPDFLG  182 (779)
Q Consensus       144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~-----------------------------------------~p~~~~  182 (779)
                      ++|.+.+  + ........+..+....|.+...                                         ....+ 
T Consensus       118 ~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  193 (384)
T d2omza2         118 FNNQITD--I-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL-  193 (384)
T ss_dssp             CSSCCCC--C-GGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGG-
T ss_pred             ccccccc--c-ccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccc-
Confidence            9999865  1 2233344444444444443211                                         11112 


Q ss_pred             CCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCC
Q 004020          183 GDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSL  262 (779)
Q Consensus       183 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L  262 (779)
                       ..+++++.|++++|.+++..|.. ...+|+.|++++|.+...     ..+..+++|+.|++++|.+++.+ .+..+++|
T Consensus       194 -~~l~~~~~l~l~~n~i~~~~~~~-~~~~L~~L~l~~n~l~~~-----~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~~L  265 (384)
T d2omza2         194 -AKLTNLESLIATNNQISDITPLG-ILTNLDELSLNGNQLKDI-----GTLASLTNLTDLDLANNQISNLA-PLSGLTKL  265 (384)
T ss_dssp             -GGCTTCSEEECCSSCCCCCGGGG-GCTTCCEEECCSSCCCCC-----GGGGGCTTCSEEECCSSCCCCCG-GGTTCTTC
T ss_pred             -ccccccceeeccCCccCCCCccc-ccCCCCEEECCCCCCCCc-----chhhcccccchhccccCccCCCC-cccccccC
Confidence             25678889999999998765532 235788999998877653     34667889999999999988754 47778899


Q ss_pred             cEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccCCCCcccCccchhhhhhcccCC
Q 004020          263 QDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVG  342 (779)
Q Consensus       263 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (779)
                      +.|++++|++++..  .+..++.++.+++++|++++...                                         
T Consensus       266 ~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~~~-----------------------------------------  302 (384)
T d2omza2         266 TELKLGANQISNIS--PLAGLTALTNLELNENQLEDISP-----------------------------------------  302 (384)
T ss_dssp             SEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCCGG-----------------------------------------
T ss_pred             CEeeccCcccCCCC--ccccccccccccccccccccccc-----------------------------------------
Confidence            99999999998643  37788889999999988875311                                         


Q ss_pred             CchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCccccccccccccccccCCeEeccCccccccCCccCCCCCCCCc
Q 004020          343 YPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEM  422 (779)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~  422 (779)
                                             ....++++.|++++|++++..|  +..+++|++|+|++|+|+ .+| .+..+++|++
T Consensus       303 -----------------------~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~  355 (384)
T d2omza2         303 -----------------------ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVS-DVS-SLANLTNINW  355 (384)
T ss_dssp             -----------------------GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCE
T ss_pred             -----------------------cchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCC-CCh-hHcCCCCCCE
Confidence                                   0011245566666666665322  556666666666666666 333 4566666666


Q ss_pred             eeccCCcccccCC
Q 004020          423 LDVSNNHLFGKVP  435 (779)
Q Consensus       423 L~Ls~N~l~g~iP  435 (779)
                      |||++|++++.+|
T Consensus       356 L~l~~N~l~~l~~  368 (384)
T d2omza2         356 LSAGHNQISDLTP  368 (384)
T ss_dssp             EECCSSCCCBCGG
T ss_pred             EECCCCcCCCChh
Confidence            6666666665544


No 66 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=7.7e-26  Score=233.45  Aligned_cols=266  Identities=18%  Similarity=0.264  Sum_probs=183.7

Q ss_pred             EEEecCCCccccCCccccCCCCCcEEEcccCccccCCC-CCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcc-cC
Q 004020           69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD-YN  146 (779)
Q Consensus        69 ~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls-~N  146 (779)
                      .++.++++++ .+|..+.  +.+++|+|++|+|+.+++ +|.++++|++|++++|+++.+++..+..++.++.++.. .|
T Consensus        15 ~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~   91 (284)
T d1ozna_          15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA   91 (284)
T ss_dssp             EEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred             EEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence            3456667777 6776654  578999999999988777 78999999999999999999999888889999998875 55


Q ss_pred             CCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCC
Q 004020          147 SFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKL  226 (779)
Q Consensus       147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~  226 (779)
                      .+.. ..+..|.++++|+.|++++|.+....+..+.  ...+|+.+++++|+|++..+..|.                  
T Consensus        92 ~~~~-l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~--~~~~L~~l~l~~N~l~~i~~~~f~------------------  150 (284)
T d1ozna_          92 QLRS-VDPATFHGLGRLHTLHLDRCGLQELGPGLFR--GLAALQYLYLQDNALQALPDDTFR------------------  150 (284)
T ss_dssp             TCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTT------------------
T ss_pred             cccc-ccchhhcccccCCEEecCCcccccccccccc--hhcccchhhhccccccccChhHhc------------------
Confidence            5544 5678888899999999999988766666664  678888999999998865555554                  


Q ss_pred             CCchhhhcCCCCccEEEeecCcccCCCCC-CCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCCCC
Q 004020          227 NGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNS  305 (779)
Q Consensus       227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~  305 (779)
                              .+++|+.|+|++|+|++.++. |.++++|+.+++++|++++..|..|..+++|++|++++|++++.+|..+ 
T Consensus       151 --------~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~-  221 (284)
T d1ozna_         151 --------DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL-  221 (284)
T ss_dssp             --------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHH-
T ss_pred             --------cccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccccccccccccc-
Confidence                    356666666666666665553 5666666666666666666666666666666666666666665443211 


Q ss_pred             CcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCcccccc
Q 004020          306 PVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGT  385 (779)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~  385 (779)
                                                                                   ....+|++|+|++|.+...
T Consensus       222 -------------------------------------------------------------~~~~~L~~L~l~~N~l~C~  240 (284)
T d1ozna_         222 -------------------------------------------------------------APLRALQYLRLNDNPWVCD  240 (284)
T ss_dssp             -------------------------------------------------------------TTCTTCCEEECCSSCEECS
T ss_pred             -------------------------------------------------------------ccccccCEEEecCCCCCCC
Confidence                                                                         1112456666666666543


Q ss_pred             ccccccccccCCeEeccCccccccCCccCCCCCCCCceeccCCcccc
Q 004020          386 ISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFG  432 (779)
Q Consensus       386 ~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g  432 (779)
                      -+. ..-...++.+....+++....|..+..   +..++++.+.|+|
T Consensus       241 C~~-~~l~~~l~~~~~~~~~~~C~~p~~l~g---~~l~~l~~~~l~g  283 (284)
T d1ozna_         241 CRA-RPLWAWLQKFRGSSSEVPCSLPQRLAG---RDLKRLAANDLQG  283 (284)
T ss_dssp             GGG-HHHHHHHHHCCSEECCCBEEESGGGTT---CBGGGSCGGGSCC
T ss_pred             ccc-hHHHHHHHhCcCCCCceEeCCchHHcC---CccccCCHHHCCC
Confidence            221 111223556666677777777776653   4556667777766


No 67 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.93  E-value=7.5e-25  Score=236.32  Aligned_cols=292  Identities=23%  Similarity=0.300  Sum_probs=221.5

Q ss_pred             EecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCC
Q 004020           71 QIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDS  150 (779)
Q Consensus        71 ~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~  150 (779)
                      +++.+++++.++  ..++.+|++|++++|.|+. ++.+..+++|++|+|++|+|+.+++  +.++++|++|++++|++.+
T Consensus        28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~-l~gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~~  102 (384)
T d2omza2          28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD  102 (384)
T ss_dssp             HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred             HhCCCCCCCccC--HHHhCCCCEEECCCCCCCC-ccccccCCCCCEEeCcCCcCCCCcc--ccCCccccccccccccccc
Confidence            445555665554  3567799999999999985 4678899999999999999999975  9999999999999999976


Q ss_pred             CCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCc----------------------------
Q 004020          151 WVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGP----------------------------  202 (779)
Q Consensus       151 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~----------------------------  202 (779)
                        ++ .+.++++|+.|++++|.+++..+...    ...+..+....|.+...                            
T Consensus       103 --i~-~l~~l~~L~~L~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (384)
T d2omza2         103 --IT-PLANLTNLTGLTLFNNQITDIDPLKN----LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT  175 (384)
T ss_dssp             --CG-GGTTCTTCCEEECCSSCCCCCGGGTT----CTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCT
T ss_pred             --cc-cccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccchhhhhcccc
Confidence              33 48899999999999999986544332    33444444443332211                            


Q ss_pred             -------------CCCcccc-CCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEcc
Q 004020          203 -------------IPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVR  268 (779)
Q Consensus       203 -------------~p~~~~~-~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~  268 (779)
                                   .+..+.. .++..+++++|.+....     ....+++|+.|++++|+++. ++.+..+++|+.|+++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~-----~~~~~~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~  249 (384)
T d2omza2         176 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDIT-----PLGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLA  249 (384)
T ss_dssp             TCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCG-----GGGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECC
T ss_pred             ccccccccccccccccccccccccceeeccCCccCCCC-----cccccCCCCEEECCCCCCCC-cchhhcccccchhccc
Confidence                         1111111 56888899988776542     24567899999999999986 4568889999999999


Q ss_pred             CCccccccChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhcc
Q 004020          269 DNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLA  348 (779)
Q Consensus       269 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (779)
                      +|++++..  .+..+++|+.|++++|++++..+-                                              
T Consensus       250 ~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~~~----------------------------------------------  281 (384)
T d2omza2         250 NNQISNLA--PLSGLTKLTELKLGANQISNISPL----------------------------------------------  281 (384)
T ss_dssp             SSCCCCCG--GGTTCTTCSEEECCSSCCCCCGGG----------------------------------------------
T ss_pred             cCccCCCC--cccccccCCEeeccCcccCCCCcc----------------------------------------------
Confidence            99999754  388899999999999998764331                                              


Q ss_pred             cccCCCCCCCCCCCccccCCCCCeEEEEccCccccccccccccccccCCeEeccCccccccCCccCCCCCCCCceeccCC
Q 004020          349 ESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN  428 (779)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N  428 (779)
                                        .....+..+++..|.+++  ...+..+++++.|+|++|+|++..  .+..+++|++|+|++|
T Consensus       282 ------------------~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n  339 (384)
T d2omza2         282 ------------------AGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANN  339 (384)
T ss_dssp             ------------------TTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSS
T ss_pred             ------------------cccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCC
Confidence                              112257788999999986  345888999999999999999653  3788999999999999


Q ss_pred             cccccCCC---CCCcceeeeCCCCCC
Q 004020          429 HLFGKVPN---FRQNVIVKTDGNPDI  451 (779)
Q Consensus       429 ~l~g~iP~---~~~~~~~~~~~n~~~  451 (779)
                      +|++ +|.   +.....+.+.+|...
T Consensus       340 ~l~~-l~~l~~l~~L~~L~l~~N~l~  364 (384)
T d2omza2         340 KVSD-VSSLANLTNINWLSAGHNQIS  364 (384)
T ss_dssp             CCCC-CGGGGGCTTCCEEECCSSCCC
T ss_pred             CCCC-ChhHcCCCCCCEEECCCCcCC
Confidence            9986 443   334446677777543


No 68 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=1.4e-24  Score=223.80  Aligned_cols=216  Identities=22%  Similarity=0.310  Sum_probs=191.0

Q ss_pred             ceeeEeCCC----------CcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCC-CCCCCCCccEEecC-CCC
Q 004020           56 WKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFD-DNN  123 (779)
Q Consensus        56 w~gv~c~~~----------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~-~N~  123 (779)
                      |.-|.|+..          ..+++|+|++|+|+...+.+|..+++|++|++++|++..+.+ .+.++..++.++.. .|.
T Consensus        13 ~~~v~c~~~~L~~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~   92 (284)
T d1ozna_          13 KVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ   92 (284)
T ss_dssp             SCEEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred             CeEEEcCCCCCCccCCCCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence            445777652          257899999999997777789999999999999999998887 78889999998764 788


Q ss_pred             CCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcC
Q 004020          124 FTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPI  203 (779)
Q Consensus       124 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~  203 (779)
                      ++.+++..|.++++|++|++++|.+.. ..+..+..+.+|+.+++++|++++..+..|.  .+++|++|+|++|+|++..
T Consensus        93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~--~~~~L~~L~l~~N~l~~l~  169 (284)
T d1ozna_          93 LRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQALPDDTFR--DLGNLTHLFLHGNRISSVP  169 (284)
T ss_dssp             CCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCEEC
T ss_pred             cccccchhhcccccCCEEecCCccccc-ccccccchhcccchhhhccccccccChhHhc--cccchhhcccccCcccccc
Confidence            999999999999999999999999976 5677888999999999999999977677775  6889999999999999766


Q ss_pred             CCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCC-CCCCCCCcEEEccCCccccccChhhhC
Q 004020          204 PLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVN  282 (779)
Q Consensus       204 p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~  282 (779)
                      +..+.                          .+++|+.|++++|++++..|. |..+++|++|++++|++.+..|..|..
T Consensus       170 ~~~f~--------------------------~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~  223 (284)
T d1ozna_         170 ERAFR--------------------------GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP  223 (284)
T ss_dssp             TTTTT--------------------------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT
T ss_pred             hhhhc--------------------------cccccchhhhhhccccccChhHhhhhhhccccccccccccccccccccc
Confidence            66654                          689999999999999998875 899999999999999999988899999


Q ss_pred             CCCCCEEEccCccccccC
Q 004020          283 LHSLAVVNLTNNLFQGQT  300 (779)
Q Consensus       283 l~~L~~L~Ls~N~l~g~~  300 (779)
                      +++|++|+|++|++.+..
T Consensus       224 ~~~L~~L~l~~N~l~C~C  241 (284)
T d1ozna_         224 LRALQYLRLNDNPWVCDC  241 (284)
T ss_dssp             CTTCCEEECCSSCEECSG
T ss_pred             ccccCEEEecCCCCCCCc
Confidence            999999999999998643


No 69 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91  E-value=1e-23  Score=219.80  Aligned_cols=264  Identities=19%  Similarity=0.225  Sum_probs=212.0

Q ss_pred             CCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEecc
Q 004020           90 SLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSAN  169 (779)
Q Consensus        90 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~  169 (779)
                      .++.+|=++++|+.+|+.+.  ++|++|+|++|+|+.+++..|.++++|++|++++|.+.. ..|..|.++++|+.|+++
T Consensus        11 ~~~~~~C~~~~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~-i~~~~f~~l~~L~~L~l~   87 (305)
T d1xkua_          11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK-ISPGAFAPLVKLERLYLS   87 (305)
T ss_dssp             ETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECC
T ss_pred             cCCEEEecCCCCCccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccc-cchhhhhCCCccCEeccc
Confidence            46678888888987766664  689999999999999999999999999999999999986 567889999999999999


Q ss_pred             CceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcc
Q 004020          170 GANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSF  249 (779)
Q Consensus       170 ~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l  249 (779)
                      +|+++ .+|..+    .+.+..|++++|.+.+..+..+                          .....+..++...|..
T Consensus        88 ~n~l~-~l~~~~----~~~l~~L~~~~n~l~~l~~~~~--------------------------~~~~~~~~l~~~~n~~  136 (305)
T d1xkua_          88 KNQLK-ELPEKM----PKTLQELRVHENEITKVRKSVF--------------------------NGLNQMIVVELGTNPL  136 (305)
T ss_dssp             SSCCS-BCCSSC----CTTCCEEECCSSCCCBBCHHHH--------------------------TTCTTCCEEECCSSCC
T ss_pred             CCccC-cCccch----hhhhhhhhccccchhhhhhhhh--------------------------hccccccccccccccc
Confidence            99998 566654    4678899999999885433322                          2456777888888866


Q ss_pred             cCC--CC-CCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccCCCCcc
Q 004020          250 TGP--LP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVA  326 (779)
Q Consensus       250 ~~~--~~-~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  326 (779)
                      ...  .+ .+..+++|+.+++++|.+. .+|..+  +++|+.|++++|.+++.++..+.                     
T Consensus       137 ~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~---------------------  192 (305)
T d1xkua_         137 KSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLK---------------------  192 (305)
T ss_dssp             CGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGT---------------------
T ss_pred             cccCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhh---------------------
Confidence            543  23 3788999999999999998 466554  68999999999998877664221                     


Q ss_pred             cCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCccccccccccccccccCCeEeccCccc
Q 004020          327 CDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNEL  406 (779)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l  406 (779)
                                                               ....++.|++++|.+.+..+..|.++++|++|+|++|+|
T Consensus       193 -----------------------------------------~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L  231 (305)
T d1xkua_         193 -----------------------------------------GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL  231 (305)
T ss_dssp             -----------------------------------------TCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred             -----------------------------------------ccccccccccccccccccccccccccccceeeecccccc
Confidence                                                     223688999999999999999999999999999999999


Q ss_pred             cccCCccCCCCCCCCceeccCCcccccCCC----------CCCcceeeeCCCCCCCC
Q 004020          407 TGTIPKELTTLPSLEMLDVSNNHLFGKVPN----------FRQNVIVKTDGNPDIGK  453 (779)
Q Consensus       407 ~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~----------~~~~~~~~~~~n~~~~~  453 (779)
                      + .+|.++..+++|++|+|++|+|+.--+.          ......+.+.+|++.+.
T Consensus       232 ~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~  287 (305)
T d1xkua_         232 V-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW  287 (305)
T ss_dssp             S-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred             c-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccC
Confidence            9 8899999999999999999999843221          12233567788886543


No 70 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=3.5e-24  Score=218.47  Aligned_cols=202  Identities=22%  Similarity=0.238  Sum_probs=177.7

Q ss_pred             eCCCCcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCC-CCCCCCCccEEecCCCCCCCCCcccccCCCCcc
Q 004020           61 CSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQ  139 (779)
Q Consensus        61 c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~  139 (779)
                      |+......+++.++++|+ .+|+.+.  ++|++|+|++|+|++.++ .|.++++|++|+|++|+|+.++.  +..+++|+
T Consensus         6 ~~~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--~~~l~~L~   80 (266)
T d1p9ag_           6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG   80 (266)
T ss_dssp             EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred             EcccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc--cccccccc
Confidence            555556677899999999 6788775  589999999999998886 79999999999999999998875  57899999


Q ss_pred             EEEcccCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccC
Q 004020          140 TISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNG  219 (779)
Q Consensus       140 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~  219 (779)
                      +|+|++|++..  .+..+..+++|+.|++++|.+.+..+..+.  .+.++++|++++|.++...+..+.           
T Consensus        81 ~L~Ls~N~l~~--~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~--~l~~l~~L~l~~n~l~~l~~~~~~-----------  145 (266)
T d1p9ag_          81 TLDLSHNQLQS--LPLLGQTLPALTVLDVSFNRLTSLPLGALR--GLGELQELYLKGNELKTLPPGLLT-----------  145 (266)
T ss_dssp             EEECCSSCCSS--CCCCTTTCTTCCEEECCSSCCCCCCSSTTT--TCTTCCEEECTTSCCCCCCTTTTT-----------
T ss_pred             ccccccccccc--cccccccccccccccccccccceeeccccc--cccccccccccccccceecccccc-----------
Confidence            99999999975  678899999999999999999877666665  789999999999999955544433           


Q ss_pred             CCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCC-CCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccc
Q 004020          220 QKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQG  298 (779)
Q Consensus       220 n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g  298 (779)
                                     .+++|+.|++++|+|++.+++ +..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|++..
T Consensus       146 ---------------~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C  209 (266)
T d1p9ag_         146 ---------------PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC  209 (266)
T ss_dssp             ---------------TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred             ---------------ccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence                           588999999999999998885 888999999999999999 789999999999999999999875


No 71 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89  E-value=8.5e-24  Score=226.14  Aligned_cols=172  Identities=23%  Similarity=0.284  Sum_probs=134.3

Q ss_pred             cCCcccceecccccEEEEEEEEc-CCcEEEEEEecccccChhHHHHHHHHHHHHHcCC-----------CCccceEeeEE
Q 004020          590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-----------HRHLVGLLGYC  657 (779)
Q Consensus       590 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~  657 (779)
                      ++|++.++||+|+||+||+|+.. +|+.||||+++...   ...+.+.+|+++++.++           |+||+++++++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~---~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc---cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            35999999999999999999874 79999999997542   23456788999888775           57899999888


Q ss_pred             EeC--CeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCC--
Q 004020          658 LDG--NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM--  733 (779)
Q Consensus       658 ~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~--  733 (779)
                      ...  ...+++|+++..+..........  ....+++..+..++.||+.||+|||+  ..+|+||||||+|||++.++  
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~  165 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSP  165 (362)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETT
T ss_pred             eeccccceeeeeeecccccccccccccc--cccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcc
Confidence            643  56677777776554433332222  23467889999999999999999996  47899999999999998654  


Q ss_pred             ----cEEEEeeccceecCCCCCcccccccccCCccccccccccc
Q 004020          734 ----RAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAAET  773 (779)
Q Consensus       734 ----~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  773 (779)
                          .+|++|||.|+.....     ....+||+.|+|||++.+.
T Consensus       166 ~~~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~  204 (362)
T d1q8ya_         166 ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGA  204 (362)
T ss_dssp             TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTC
T ss_pred             cccceeeEeecccccccccc-----cccccccccccChhhcccc
Confidence                3999999999865432     2345799999999988754


No 72 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=1.8e-22  Score=205.56  Aligned_cols=203  Identities=26%  Similarity=0.262  Sum_probs=123.5

Q ss_pred             CCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCC
Q 004020          108 LSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIP  187 (779)
Q Consensus       108 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~  187 (779)
                      +.+...+.+++.++++|+.+|++..   ++|++|+|++|+|.+ ..+..|.++++|++|+|++|+|+. +|. ++  .++
T Consensus         6 ~~~~~~~~~v~C~~~~L~~iP~~lp---~~l~~L~Ls~N~i~~-l~~~~f~~l~~L~~L~L~~N~l~~-l~~-~~--~l~   77 (266)
T d1p9ag_           6 VSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELTK-LQV-DG--TLP   77 (266)
T ss_dssp             EECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCCE-EEC-CS--CCT
T ss_pred             EcccCCCeEEEccCCCCCeeCcCcC---cCCCEEECcCCcCCC-cCHHHhhccccccccccccccccc-ccc-cc--ccc
Confidence            4556677777888888888876532   467788888888765 333556666666666666666653 222 11  345


Q ss_pred             cccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEc
Q 004020          188 GLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSV  267 (779)
Q Consensus       188 ~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l  267 (779)
                      +|++|+|++|+++                                                  +.++.+..+++|++|++
T Consensus        78 ~L~~L~Ls~N~l~--------------------------------------------------~~~~~~~~l~~L~~L~l  107 (266)
T d1p9ag_          78 VLGTLDLSHNQLQ--------------------------------------------------SLPLLGQTLPALTVLDV  107 (266)
T ss_dssp             TCCEEECCSSCCS--------------------------------------------------SCCCCTTTCTTCCEEEC
T ss_pred             ccccccccccccc--------------------------------------------------ccccccccccccccccc
Confidence            5555555555554                                                  33333444444444444


Q ss_pred             cCCccccccChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhc
Q 004020          268 RDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVL  347 (779)
Q Consensus       268 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (779)
                      ++|.+.+..+..+..+.+++.|++++|.++...+..+.                                          
T Consensus       108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~------------------------------------------  145 (266)
T d1p9ag_         108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLT------------------------------------------  145 (266)
T ss_dssp             CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTT------------------------------------------
T ss_pred             cccccceeeccccccccccccccccccccceecccccc------------------------------------------
Confidence            44444444444444444455555555544433332111                                          


Q ss_pred             ccccCCCCCCCCCCCccccCCCCCeEEEEccCccccccccccccccccCCeEeccCccccccCCccCCCCCCCCceeccC
Q 004020          348 AESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSN  427 (779)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~  427 (779)
                                          ..++++.+++++|+|++..+..|..+++|++|+|++|+|+ .+|.++..+++|+.|+|++
T Consensus       146 --------------------~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~  204 (266)
T d1p9ag_         146 --------------------PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHG  204 (266)
T ss_dssp             --------------------TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCS
T ss_pred             --------------------ccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecC
Confidence                                1124455555555555555566778889999999999999 8999999999999999988


Q ss_pred             Cccc
Q 004020          428 NHLF  431 (779)
Q Consensus       428 N~l~  431 (779)
                      |++.
T Consensus       205 Np~~  208 (266)
T d1p9ag_         205 NPWL  208 (266)
T ss_dssp             CCBC
T ss_pred             CCCC
Confidence            8764


No 73 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.86  E-value=1e-21  Score=189.07  Aligned_cols=137  Identities=15%  Similarity=0.148  Sum_probs=107.4

Q ss_pred             CcccceecccccEEEEEEEEcCCcEEEEEEecccccC----------------hhHHHHHHHHHHHHHcCCCCccceEee
Q 004020          592 FSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVS----------------EKGFAEFKSEIAVLTKVRHRHLVGLLG  655 (779)
Q Consensus       592 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~~E~~~l~~l~h~niv~~~~  655 (779)
                      +.+.+.||+|+||.||+|+..+|+.||||+++.....                ........+|...+.++.|++++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            3567899999999999999889999999987532110                111234567899999999999998876


Q ss_pred             EEEeCCeEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcCCCCCCEEEcCCCcE
Q 004020          656 YCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA  735 (779)
Q Consensus       656 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~  735 (779)
                      +.    ..+++|||+++..+.+            ++...+..++.|++++++|||+   ++|+||||||+|||++++ .+
T Consensus        82 ~~----~~~lvme~~~~~~~~~------------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~  141 (191)
T d1zara2          82 WE----GNAVLMELIDAKELYR------------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GI  141 (191)
T ss_dssp             EE----TTEEEEECCCCEEGGG------------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EE
T ss_pred             ec----CCEEEEEeeccccccc------------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CE
Confidence            53    2379999998765432            2333456889999999999996   899999999999999865 48


Q ss_pred             EEEeeccceecCC
Q 004020          736 KVADFGLVRLAPD  748 (779)
Q Consensus       736 kl~DFG~a~~~~~  748 (779)
                      +|+|||.|+....
T Consensus       142 ~liDFG~a~~~~~  154 (191)
T d1zara2         142 WIIDFPQSVEVGE  154 (191)
T ss_dssp             EECCCTTCEETTS
T ss_pred             EEEECCCcccCCC
Confidence            9999999987653


No 74 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81  E-value=8.8e-18  Score=177.76  Aligned_cols=304  Identities=20%  Similarity=0.257  Sum_probs=192.2

Q ss_pred             cEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEccc
Q 004020           66 RVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDY  145 (779)
Q Consensus        66 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~  145 (779)
                      ++++|||++++++ .+|+.   +++|++|+|++|+|+..+..   +.+|+.|++++|+++.++.-    .+.|++|+|++
T Consensus        39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~l~~n~l~~l~~l----p~~L~~L~L~~  107 (353)
T d1jl5a_          39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSDL----PPLLEYLGVSN  107 (353)
T ss_dssp             TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCSC----CTTCCEEECCS
T ss_pred             CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCcccccc---hhhhhhhhhhhcccchhhhh----ccccccccccc
Confidence            5789999999998 67853   57899999999999955434   45799999999999987631    24799999999


Q ss_pred             CCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCcccc-CCcceeeccCCCCCC
Q 004020          146 NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGDS  224 (779)
Q Consensus       146 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~L~~l~l~~n~~~~  224 (779)
                      |.+..  +|. +..+++|+.|++++|.++.. +..     ...+..+.+..+....  +..+.. ..++.+++..|....
T Consensus       108 n~l~~--lp~-~~~l~~L~~L~l~~~~~~~~-~~~-----~~~l~~l~~~~~~~~~--~~~l~~l~~l~~L~l~~n~~~~  176 (353)
T d1jl5a_         108 NQLEK--LPE-LQNSSFLKIIDVDNNSLKKL-PDL-----PPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKK  176 (353)
T ss_dssp             SCCSS--CCC-CTTCTTCCEEECCSSCCSCC-CCC-----CTTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCCSS
T ss_pred             ccccc--ccc-hhhhccceeecccccccccc-ccc-----cccccchhhccccccc--cccccccccceecccccccccc
Confidence            99975  554 67899999999999988743 322     3467777777766652  223332 456677777665543


Q ss_pred             CCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCCC
Q 004020          225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFN  304 (779)
Q Consensus       225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~  304 (779)
                      ...       .....+.+.+..+.+. .++.+..++.|+.+++++|.... +|.   ...++..+.+.+|.+........
T Consensus       177 ~~~-------~~~~~~~l~~~~~~~~-~~~~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~~~~~~  244 (353)
T d1jl5a_         177 LPD-------LPLSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDLPELPQ  244 (353)
T ss_dssp             CCC-------CCTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCCCCCCT
T ss_pred             ccc-------cccccccccccccccc-ccccccccccccccccccccccc-ccc---ccccccccccccccccccccccc
Confidence            221       1223445555554444 45556677788888888877663 443   23456777777777664332211


Q ss_pred             CCcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCccccc
Q 004020          305 SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSG  384 (779)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g  384 (779)
                      .......... ....+.              ......      ..     ..+...........+++|++|+|++|+|+ 
T Consensus       245 ~l~~~~~~~~-~~~~l~--------------~l~~~~------~~-----~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-  297 (353)
T d1jl5a_         245 SLTFLDVSEN-IFSGLS--------------ELPPNL------YY-----LNASSNEIRSLCDLPPSLEELNVSNNKLI-  297 (353)
T ss_dssp             TCCEEECCSS-CCSEES--------------CCCTTC------CE-----EECCSSCCSEECCCCTTCCEEECCSSCCS-
T ss_pred             cccccccccc-cccccc--------------cccchh------cc-----cccccCccccccccCCCCCEEECCCCccC-
Confidence            1100000000 000000              000000      00     00000011111233568999999999998 


Q ss_pred             cccccccccccCCeEeccCccccccCCccCCCCCCCCceeccCCcccccCCCCC
Q 004020          385 TISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFR  438 (779)
Q Consensus       385 ~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~  438 (779)
                      .+|..   +++|+.|+|++|+|+ .+|..   +.+|++|+|++|+|+ .+|...
T Consensus       298 ~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~  343 (353)
T d1jl5a_         298 ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIP  343 (353)
T ss_dssp             CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCC
T ss_pred             ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCccc
Confidence            57754   578999999999999 78864   467999999999987 567543


No 75 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=3e-18  Score=171.47  Aligned_cols=219  Identities=16%  Similarity=0.158  Sum_probs=126.3

Q ss_pred             EEEecCCCccccCCccccCCCCCcEEEcccCccccCCC-CCCCCCCccEEecCCCCCCC-CCcccccCCCCccEEEccc-
Q 004020           69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTS-VPSDFFKGLTSLQTISLDY-  145 (779)
Q Consensus        69 ~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~-  145 (779)
                      .++.++.+++ .+|+.+.  +++++|+|++|+|+.+++ +|.++++|++|+|++|.+.. +++..|.+++++++|++.. 
T Consensus        12 ~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~   88 (242)
T d1xwdc1          12 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA   88 (242)
T ss_dssp             EEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred             EEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence            4666677777 7776653  467788888888776665 57777777777777776654 4555666666666666543 


Q ss_pred             CCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCC
Q 004020          146 NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSK  225 (779)
Q Consensus       146 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~  225 (779)
                      |++                         +...+..|.  .+++|++|++++|+++...+...                  
T Consensus        89 n~l-------------------------~~~~~~~~~--~l~~L~~l~l~~~~l~~~~~~~~------------------  123 (242)
T d1xwdc1          89 NNL-------------------------LYINPEAFQ--NLPNLQYLLISNTGIKHLPDVHK------------------  123 (242)
T ss_dssp             TTC-------------------------CEECTTSEE--CCTTCCEEEEESCCCCSCCCCTT------------------
T ss_pred             ccc-------------------------ccccccccc--ccccccccccchhhhcccccccc------------------
Confidence            333                         334444443  46666666666666653222111                  


Q ss_pred             CCCchhhhcCCCCccEEEeecCcccCCCC-CCCCC-CCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCC
Q 004020          226 LNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGL-SSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKF  303 (779)
Q Consensus       226 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l-~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~  303 (779)
                             +..+..+..+..+++.+....+ .+.++ ..++.|++++|+++. ++....+..++.                
T Consensus       124 -------~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~-i~~~~~~~~~l~----------------  179 (242)
T d1xwdc1         124 -------IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNCAFNGTQLD----------------  179 (242)
T ss_dssp             -------TCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTTTTTCCEE----------------
T ss_pred             -------cccccccccccccccccccccccccccccccceeeecccccccc-cccccccchhhh----------------
Confidence                   1134455555555555554433 24333 245555555555553 222222222222                


Q ss_pred             CCCcccccccCCCCcccCCCCcccCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCcccc
Q 004020          304 NSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLS  383 (779)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~  383 (779)
                                                                                           +.+++++|+++
T Consensus       180 ---------------------------------------------------------------------~~~~l~~n~l~  190 (242)
T d1xwdc1         180 ---------------------------------------------------------------------ELNLSDNNNLE  190 (242)
T ss_dssp             ---------------------------------------------------------------------EEECTTCTTCC
T ss_pred             ---------------------------------------------------------------------ccccccccccc
Confidence                                                                                 22334555555


Q ss_pred             ccccccccccccCCeEeccCccccccCCccCCCCCCCCceeccCC
Q 004020          384 GTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN  428 (779)
Q Consensus       384 g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N  428 (779)
                      ...+..|.++++|++|+|++|+|+...+..|..++.|++|++.+.
T Consensus       191 ~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~l  235 (242)
T d1xwdc1         191 ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL  235 (242)
T ss_dssp             CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEESS
T ss_pred             cccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCCC
Confidence            333345777888999999999998433445777888887777543


No 76 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76  E-value=1.7e-18  Score=171.33  Aligned_cols=185  Identities=24%  Similarity=0.379  Sum_probs=115.7

Q ss_pred             cEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEccc
Q 004020           66 RVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDY  145 (779)
Q Consensus        66 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~  145 (779)
                      .++.|++.+|+|+. ++ .+..+++|++|+|++|++++..+ +.++++|++|++++|.++.++  .+.++++|+++++++
T Consensus        42 ~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~~~~i~--~l~~l~~L~~l~l~~  116 (227)
T d1h6ua2          42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLTS  116 (227)
T ss_dssp             TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECTT
T ss_pred             CcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc-ccccccccccccccccccccc--ccccccccccccccc
Confidence            45666666666653 32 35566666666666666554332 555566666666666665543  245566666666665


Q ss_pred             CCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCC
Q 004020          146 NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSK  225 (779)
Q Consensus       146 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~  225 (779)
                      +....   ...+...+.+..+.++++.+....+  +.  .+++|++|++++|.++..                       
T Consensus       117 ~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~--~~--~~~~L~~L~l~~n~~~~~-----------------------  166 (227)
T d1h6ua2         117 TQITD---VTPLAGLSNLQVLYLDLNQITNISP--LA--GLTNLQYLSIGNAQVSDL-----------------------  166 (227)
T ss_dssp             SCCCC---CGGGTTCTTCCEEECCSSCCCCCGG--GG--GCTTCCEEECCSSCCCCC-----------------------
T ss_pred             ccccc---cchhccccchhhhhchhhhhchhhh--hc--cccccccccccccccccc-----------------------
Confidence            55532   2234445555555555555543222  11  345555555555555421                       


Q ss_pred             CCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccC
Q 004020          226 LNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTN  293 (779)
Q Consensus       226 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~  293 (779)
                           ..++++++|+.|+|++|++++ ++.+..+++|++|++++|++++. | .+.++++|+.|+|++
T Consensus       167 -----~~l~~l~~L~~L~Ls~n~l~~-l~~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn  226 (227)
T d1h6ua2         167 -----TPLANLSKLTTLKADDNKISD-ISPLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN  226 (227)
T ss_dssp             -----GGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred             -----hhhcccccceecccCCCccCC-ChhhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEeeC
Confidence                 124578999999999999986 45688899999999999999864 4 388999999999974


No 77 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=1.4e-18  Score=173.87  Aligned_cols=212  Identities=18%  Similarity=0.204  Sum_probs=165.3

Q ss_pred             CcceeeEeCCC----------CcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCC--CCCCCCCccEEecCC
Q 004020           54 CKWKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP--SLSGLSSLQEVLFDD  121 (779)
Q Consensus        54 C~w~gv~c~~~----------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~l~~  121 (779)
                      |.+..|.|+..          ..+++|+|++|.|+...+.+|.++++|++|+|++|.+...++  .|.+++++++|++.+
T Consensus         8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~   87 (242)
T d1xwdc1           8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK   87 (242)
T ss_dssp             ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred             CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence            67778899742          269999999999996666689999999999999999877554  689999999999764


Q ss_pred             -CCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCC
Q 004020          122 -NNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQ  200 (779)
Q Consensus       122 -N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~  200 (779)
                       |++..+++..|.++++|++|++++|++........+..+..+..+...++.+....+..+.+ ....++.|++++|+++
T Consensus        88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~-~~~~l~~L~l~~n~l~  166 (242)
T d1xwdc1          88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG-LSFESVILWLNKNGIQ  166 (242)
T ss_dssp             CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTT-SBSSCEEEECCSSCCC
T ss_pred             cccccccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccc-ccccceeeeccccccc
Confidence             78999999999999999999999999976434445666777888888888888666666641 2347888999999998


Q ss_pred             CcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEE-EeecCcccCCCCC-CCCCCCCcEEEccCCccccccCh
Q 004020          201 GPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQL-WLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPS  278 (779)
Q Consensus       201 ~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L-~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~  278 (779)
                      ...+..+                           ..++++.+ ++++|+++..++. |.++++|++|++++|+|+...+.
T Consensus       167 ~i~~~~~---------------------------~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~  219 (242)
T d1xwdc1         167 EIHNCAF---------------------------NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSY  219 (242)
T ss_dssp             EECTTTT---------------------------TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSS
T ss_pred             ccccccc---------------------------cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHH
Confidence            5433332                           24555444 5677888876664 78899999999999999865556


Q ss_pred             hhhCCCCCCEEEccC
Q 004020          279 SLVNLHSLAVVNLTN  293 (779)
Q Consensus       279 ~l~~l~~L~~L~Ls~  293 (779)
                      .|.++++|+.+++.+
T Consensus       220 ~~~~l~~L~~l~~~~  234 (242)
T d1xwdc1         220 GLENLKKLRARSTYN  234 (242)
T ss_dssp             SCTTCCEEESSSEES
T ss_pred             HHcCCcccccCcCCC
Confidence            677777777776654


No 78 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75  E-value=2.8e-18  Score=167.32  Aligned_cols=179  Identities=23%  Similarity=0.359  Sum_probs=121.9

Q ss_pred             ecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCC
Q 004020           72 IGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSW  151 (779)
Q Consensus        72 l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~  151 (779)
                      ++.+.+++.++.  .++.+|++|++++|.++.. +.+..+++|++|+|++|+++.+++  +..+++|++|++++|++++ 
T Consensus        31 l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~-  104 (210)
T d1h6ta2          31 LKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-  104 (210)
T ss_dssp             TTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-
T ss_pred             hCcCccCCccCH--HHhcCccEEECcCCCCCCc-hhHhhCCCCCEEeCCCccccCccc--cccCccccccccccccccc-
Confidence            334444444332  2355667777777776643 346667777777777777776653  4567777777777777754 


Q ss_pred             CCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchh
Q 004020          152 VIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVA  231 (779)
Q Consensus       152 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~  231 (779)
                       +| .+.++++|+.|++++|.+.. ++ .+.  .++.|+++++++|.+++..  .                         
T Consensus       105 -l~-~l~~l~~L~~L~l~~~~~~~-~~-~l~--~l~~l~~l~~~~n~l~~~~--~-------------------------  151 (210)
T d1h6ta2         105 -LS-SLKDLKKLKSLSLEHNGISD-IN-GLV--HLPQLESLYLGNNKITDIT--V-------------------------  151 (210)
T ss_dssp             -GG-GGTTCTTCCEEECTTSCCCC-CG-GGG--GCTTCCEEECCSSCCCCCG--G-------------------------
T ss_pred             -cc-cccccccccccccccccccc-cc-ccc--ccccccccccccccccccc--c-------------------------
Confidence             33 46667777777777776652 33 333  5777888888888876321  1                         


Q ss_pred             hhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccC
Q 004020          232 VIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTN  293 (779)
Q Consensus       232 ~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~  293 (779)
                       +..+++|+.+++++|++++. +++.++++|++|++++|+|+. +| .+..+++|++|+|++
T Consensus       152 -~~~l~~L~~l~l~~n~l~~i-~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         152 -LSRLTKLDTLSLEDNQISDI-VPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS  209 (210)
T ss_dssp             -GGGCTTCSEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred             -cccccccccccccccccccc-ccccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence             23578899999999998864 458888999999999999984 55 588999999999874


No 79 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75  E-value=3.7e-18  Score=168.91  Aligned_cols=35  Identities=17%  Similarity=0.399  Sum_probs=23.0

Q ss_pred             ccccccCCeEeccCccccccCCccCCCCCCCCceecc
Q 004020          390 FSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVS  426 (779)
Q Consensus       390 ~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~Ls  426 (779)
                      ++++++|++|+|++|+|+ .+| .+..+++|++|+|+
T Consensus       191 l~~l~~L~~L~Ls~N~lt-~i~-~l~~l~~L~~L~ls  225 (227)
T d1h6ua2         191 LASLPNLIEVHLKNNQIS-DVS-PLANTSNLFIVTLT  225 (227)
T ss_dssp             GGGCTTCCEEECTTSCCC-BCG-GGTTCTTCCEEEEE
T ss_pred             hcCCCCCCEEECcCCcCC-CCc-ccccCCCCCEEEee
Confidence            556667777777777776 343 26677777777775


No 80 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.74  E-value=1.9e-18  Score=166.14  Aligned_cols=170  Identities=17%  Similarity=0.257  Sum_probs=134.0

Q ss_pred             EEEecCCCccccCCccccCCCCCcEEEcccCccccCCC--CCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccC
Q 004020           69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP--SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN  146 (779)
Q Consensus        69 ~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N  146 (779)
                      ++++++++++ .+|+.+.  +++++|+|++|+|++.++  .|.++++|+.|+|++|++..++++.|..+++|++|+|++|
T Consensus        12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N   88 (192)
T d1w8aa_          12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN   88 (192)
T ss_dssp             EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred             EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence            4566677888 7787764  689999999999987553  6899999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCC
Q 004020          147 SFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKL  226 (779)
Q Consensus       147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~  226 (779)
                      +|.. +.|..|.++++|+.|+|++|+|++..|+.|.  .+++|++|+|++|.+....+....                  
T Consensus        89 ~l~~-l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~--~l~~L~~l~L~~N~~~~~~~~~~~------------------  147 (192)
T d1w8aa_          89 KIKE-ISNKMFLGLHQLKTLNLYDNQISCVMPGSFE--HLNSLTSLNLASNPFNCNCHLAWF------------------  147 (192)
T ss_dssp             CCCE-ECSSSSTTCTTCCEEECCSSCCCEECTTSST--TCTTCCEEECTTCCBCCSGGGHHH------------------
T ss_pred             cccc-cCHHHHhCCCcccccccCCccccccCHHHhc--CCcccccccccccccccccchHHH------------------
Confidence            9987 6778899999999999999999988888886  789999999999999754332111                  


Q ss_pred             CCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccCCccc
Q 004020          227 NGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLT  273 (779)
Q Consensus       227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~  273 (779)
                               ...++.+.+..|.++...|.  .+..++.++++.|.+.
T Consensus       148 ---------~~~l~~~~l~~~~~~c~~p~--~l~~~~l~~L~~n~l~  183 (192)
T d1w8aa_         148 ---------AEWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFK  183 (192)
T ss_dssp             ---------HHHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCC
T ss_pred             ---------hhhhhhhcccCCCeEeCCCh--hhcCCEeeecCHhhCc
Confidence                     11234445555666544342  2345566677777765


No 81 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.73  E-value=1.2e-17  Score=161.41  Aligned_cols=175  Identities=25%  Similarity=0.395  Sum_probs=118.4

Q ss_pred             ecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCC
Q 004020           72 IGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSW  151 (779)
Q Consensus        72 l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~  151 (779)
                      ++.+++++.++  ..++.+|++|++++|.++. ++.+..+++|++|++++|+++.+++  +.++++|++|++++|.+.. 
T Consensus        25 l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-   98 (199)
T d2omxa2          25 LGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-   98 (199)
T ss_dssp             TTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-
T ss_pred             hCCCCCCCccC--HHHhcCCCEEECCCCCCCC-ccccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-
Confidence            44445554432  2345677777777777763 3456677777777777777777654  6777777777777777654 


Q ss_pred             CCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchh
Q 004020          152 VIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVA  231 (779)
Q Consensus       152 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~  231 (779)
                       ++ .+.++++|+.|++++|.+....  .+.  .+++|+.|++++|++.. ++ .                         
T Consensus        99 -~~-~l~~l~~L~~L~l~~~~~~~~~--~~~--~l~~L~~L~l~~n~l~~-~~-~-------------------------  145 (199)
T d2omxa2          99 -IT-PLANLTNLTGLTLFNNQITDID--PLK--NLTNLNRLELSSNTISD-IS-A-------------------------  145 (199)
T ss_dssp             -CG-GGTTCTTCSEEECCSSCCCCCG--GGT--TCTTCSEEECCSSCCCC-CG-G-------------------------
T ss_pred             -cc-cccccccccccccccccccccc--ccc--hhhhhHHhhhhhhhhcc-cc-c-------------------------
Confidence             33 3667777777777777766432  233  57788888888887763 22 1                         


Q ss_pred             hhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEE
Q 004020          232 VIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVV  289 (779)
Q Consensus       232 ~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L  289 (779)
                       +..+++|+.|++++|++++. +.+.++++|++|++++|+++. ++ .++.+++|+.|
T Consensus       146 -l~~~~~L~~L~l~~n~l~~l-~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L  199 (199)
T d2omxa2         146 -LSGLTSLQQLNFSSNQVTDL-KPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL  199 (199)
T ss_dssp             -GTTCTTCSEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred             -ccccccccccccccccccCC-ccccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence             23577888888888888764 457788888888888888874 43 57788888765


No 82 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.72  E-value=2e-18  Score=165.88  Aligned_cols=176  Identities=20%  Similarity=0.243  Sum_probs=125.5

Q ss_pred             cEEEcccCccccCCCCCCCCCCccEEecCCCCCCC-CCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccC
Q 004020           92 TVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTS-VPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANG  170 (779)
Q Consensus        92 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~  170 (779)
                      ++++.++|+|+.+|+.+.  +++++|+|++|+|+. ++...|.++++|++|+|++|++.. ..+..|..+++|++|+|++
T Consensus        11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~-~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_          11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCS
T ss_pred             CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccc-ccccccccccccceeeecc
Confidence            578888888886665553  678888888888875 667778888888888888888876 5677788888888888888


Q ss_pred             ceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCccc
Q 004020          171 ANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFT  250 (779)
Q Consensus       171 n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~  250 (779)
                      |+|+...|+.|.  .+++|++|+|++|+|++..|..|.                          .+++|++|+|++|.+.
T Consensus        88 N~l~~l~~~~F~--~l~~L~~L~L~~N~l~~i~~~~f~--------------------------~l~~L~~l~L~~N~~~  139 (192)
T d1w8aa_          88 NKIKEISNKMFL--GLHQLKTLNLYDNQISCVMPGSFE--------------------------HLNSLTSLNLASNPFN  139 (192)
T ss_dssp             CCCCEECSSSST--TCTTCCEEECCSSCCCEECTTSST--------------------------TCTTCCEEECTTCCBC
T ss_pred             ccccccCHHHHh--CCCcccccccCCccccccCHHHhc--------------------------CCcccccccccccccc
Confidence            888877777775  678888888888888865555553                          5777888888888777


Q ss_pred             CCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCC
Q 004020          251 GPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTP  301 (779)
Q Consensus       251 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p  301 (779)
                      ...+...-...++.+.+..|.++...|..+   ..++.++|+.|.|+...+
T Consensus       140 ~~~~~~~~~~~l~~~~l~~~~~~c~~p~~l---~~~~l~~L~~n~l~C~~~  187 (192)
T d1w8aa_         140 CNCHLAWFAEWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSEFKCSSE  187 (192)
T ss_dssp             CSGGGHHHHHHHHHHCCSGGGCBBCSSTTT---TTSBGGGSCTTTCCCCCC
T ss_pred             cccchHHHhhhhhhhcccCCCeEeCCChhh---cCCEeeecCHhhCcCCCC
Confidence            654321112235555666677766666544   345666777777765443


No 83 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.72  E-value=1.3e-15  Score=160.72  Aligned_cols=298  Identities=21%  Similarity=0.225  Sum_probs=192.4

Q ss_pred             CCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEec
Q 004020           89 SSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSA  168 (779)
Q Consensus        89 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l  168 (779)
                      .+|++|||++|.|+..++   .+++|++|+|++|+|+.+|..    +.+|++|++++|+++.  ++..   .+.|++|++
T Consensus        38 ~~l~~LdLs~~~L~~lp~---~~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l~~--l~~l---p~~L~~L~L  105 (353)
T d1jl5a_          38 RQAHELELNNLGLSSLPE---LPPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLKA--LSDL---PPLLEYLGV  105 (353)
T ss_dssp             HTCSEEECTTSCCSCCCS---CCTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCCSC--CCSC---CTTCCEEEC
T ss_pred             cCCCEEEeCCCCCCCCCC---CCCCCCEEECCCCCCcccccc----hhhhhhhhhhhcccch--hhhh---ccccccccc
Confidence            479999999999986553   357899999999999999853    5689999999999975  3332   246999999


Q ss_pred             cCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCc
Q 004020          169 NGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS  248 (779)
Q Consensus       169 ~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~  248 (779)
                      ++|.++ .+|.. +  .+++|++|++++|.++.. |...  ..+..+.+..+.....     ..+..++.++.|++++|.
T Consensus       106 ~~n~l~-~lp~~-~--~l~~L~~L~l~~~~~~~~-~~~~--~~l~~l~~~~~~~~~~-----~~l~~l~~l~~L~l~~n~  173 (353)
T d1jl5a_         106 SNNQLE-KLPEL-Q--NSSFLKIIDVDNNSLKKL-PDLP--PSLEFIAAGNNQLEEL-----PELQNLPFLTAIYADNNS  173 (353)
T ss_dssp             CSSCCS-SCCCC-T--TCTTCCEEECCSSCCSCC-CCCC--TTCCEEECCSSCCSSC-----CCCTTCTTCCEEECCSSC
T ss_pred             cccccc-cccch-h--hhccceeecccccccccc-cccc--ccccchhhcccccccc-----ccccccccceeccccccc
Confidence            999998 56653 3  689999999999999843 3332  2345555554433221     234568889999999999


Q ss_pred             ccCCCCCCCCCCCCcEEEccCCccccccChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccCCCCcccC
Q 004020          249 FTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACD  328 (779)
Q Consensus       249 l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (779)
                      +...+...   ...+.+...++.+. .+| .+..++.|+.+++++|................+..  +... ..      
T Consensus       174 ~~~~~~~~---~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~~~~~~~~l~~~~~~~--~~~~-~~------  239 (353)
T d1jl5a_         174 LKKLPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRD--NYLT-DL------  239 (353)
T ss_dssp             CSSCCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSCCTTCCEEECCS--SCCS-CC------
T ss_pred             cccccccc---cccccccccccccc-ccc-ccccccccccccccccccccccccccccccccccc--cccc-cc------
Confidence            88654322   34567777777776 344 46789999999999998765332211111111000  0000 00      


Q ss_pred             ccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCccccccccccccccccCCeEeccCccccc
Q 004020          329 GRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTG  408 (779)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g  408 (779)
                            ......+....      ..    .....+ ...........++..+.+.+.    ...+++|++|+|++|+|+ 
T Consensus       240 ------~~~~~~l~~~~------~~----~~~~~~-l~~l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~-  297 (353)
T d1jl5a_         240 ------PELPQSLTFLD------VS----ENIFSG-LSELPPNLYYLNASSNEIRSL----CDLPPSLEELNVSNNKLI-  297 (353)
T ss_dssp             ------CCCCTTCCEEE------CC----SSCCSE-ESCCCTTCCEEECCSSCCSEE----CCCCTTCCEEECCSSCCS-
T ss_pred             ------ccccccccccc------cc----cccccc-cccccchhcccccccCccccc----cccCCCCCEEECCCCccC-
Confidence                  00000000000      00    000000 011123455667777776643    234679999999999999 


Q ss_pred             cCCccCCCCCCCCceeccCCcccccCCCCC-CcceeeeCCCCC
Q 004020          409 TIPKELTTLPSLEMLDVSNNHLFGKVPNFR-QNVIVKTDGNPD  450 (779)
Q Consensus       409 ~iP~~l~~l~~L~~L~Ls~N~l~g~iP~~~-~~~~~~~~~n~~  450 (779)
                      .+|..   +++|+.|+|++|+|+ .+|... ....+.+.+|+.
T Consensus       298 ~lp~~---~~~L~~L~L~~N~L~-~l~~~~~~L~~L~L~~N~L  336 (353)
T d1jl5a_         298 ELPAL---PPRLERLIASFNHLA-EVPELPQNLKQLHVEYNPL  336 (353)
T ss_dssp             CCCCC---CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCC
T ss_pred             ccccc---cCCCCEEECCCCcCC-ccccccCCCCEEECcCCcC
Confidence            78864   578999999999998 577643 344677777764


No 84 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70  E-value=4.2e-17  Score=158.85  Aligned_cols=164  Identities=25%  Similarity=0.369  Sum_probs=138.7

Q ss_pred             CcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcc
Q 004020           65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD  144 (779)
Q Consensus        65 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls  144 (779)
                      ..++.|+++++.++.. + .+..+++|++|+|++|+|++.+ .++++++|++|++++|+++.++  .+..+++|+.|+++
T Consensus        46 ~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~  120 (210)
T d1h6ta2          46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKVKDLS--SLKDLKKLKSLSLE  120 (210)
T ss_dssp             HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCGG--GGTTCTTCCEEECT
T ss_pred             cCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCcc-ccccCccccccccccccccccc--cccccccccccccc
Confidence            3689999999999854 3 4889999999999999999755 5789999999999999999987  38899999999999


Q ss_pred             cCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCC
Q 004020          145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS  224 (779)
Q Consensus       145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~  224 (779)
                      +|.+..   ...+.+++.|+.+++++|.++..  ..+.  .+++|+++++++|++++..+                    
T Consensus       121 ~~~~~~---~~~l~~l~~l~~l~~~~n~l~~~--~~~~--~l~~L~~l~l~~n~l~~i~~--------------------  173 (210)
T d1h6ta2         121 HNGISD---INGLVHLPQLESLYLGNNKITDI--TVLS--RLTKLDTLSLEDNQISDIVP--------------------  173 (210)
T ss_dssp             TSCCCC---CGGGGGCTTCCEEECCSSCCCCC--GGGG--GCTTCSEEECCSSCCCCCGG--------------------
T ss_pred             cccccc---ccccccccccccccccccccccc--cccc--cccccccccccccccccccc--------------------
Confidence            999864   35788999999999999999843  2333  68999999999999985322                    


Q ss_pred             CCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEEEccC
Q 004020          225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRD  269 (779)
Q Consensus       225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~  269 (779)
                              +.++++|+.|+|++|+++. +|.+.++++|++|+|++
T Consensus       174 --------l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         174 --------LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFS  209 (210)
T ss_dssp             --------GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEE
T ss_pred             --------ccCCCCCCEEECCCCCCCC-ChhhcCCCCCCEEEccC
Confidence                    3368999999999999985 46788999999999864


No 85 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68  E-value=1e-16  Score=154.66  Aligned_cols=160  Identities=26%  Similarity=0.437  Sum_probs=136.1

Q ss_pred             CcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcc
Q 004020           65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD  144 (779)
Q Consensus        65 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls  144 (779)
                      .++++|++++++++. + +.+..+++|++|+|++|+|++..+ +.++++|++|++++|.+..+++  +.++++|++|+++
T Consensus        40 ~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~l~  114 (199)
T d2omxa2          40 DQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF  114 (199)
T ss_dssp             TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred             cCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc-ccCCcccccccccccccccccc--ccccccccccccc
Confidence            478999999999984 4 358899999999999999997665 8999999999999999998874  8899999999999


Q ss_pred             cCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCCcceeeccCCCCCC
Q 004020          145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS  224 (779)
Q Consensus       145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~  224 (779)
                      +|.+..   ...+..+++|+.|++++|++.. ++ .+.  .+++|++|++++|++++..+                    
T Consensus       115 ~~~~~~---~~~~~~l~~L~~L~l~~n~l~~-~~-~l~--~~~~L~~L~l~~n~l~~l~~--------------------  167 (199)
T d2omxa2         115 NNQITD---IDPLKNLTNLNRLELSSNTISD-IS-ALS--GLTSLQQLNFSSNQVTDLKP--------------------  167 (199)
T ss_dssp             SSCCCC---CGGGTTCTTCSEEECCSSCCCC-CG-GGT--TCTTCSEEECCSSCCCCCGG--------------------
T ss_pred             cccccc---ccccchhhhhHHhhhhhhhhcc-cc-ccc--ccccccccccccccccCCcc--------------------
Confidence            999864   3468899999999999999973 44 344  68999999999999985321                    


Q ss_pred             CCCCchhhhcCCCCccEEEeecCcccCCCCCCCCCCCCcEE
Q 004020          225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDF  265 (779)
Q Consensus       225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L  265 (779)
                              +.++++|+.|+|++|+++. ++.+..+++|++|
T Consensus       168 --------l~~l~~L~~L~ls~N~i~~-i~~l~~L~~L~~L  199 (199)
T d2omxa2         168 --------LANLTTLERLDISSNKVSD-ISVLAKLTNLESL  199 (199)
T ss_dssp             --------GTTCTTCCEEECCSSCCCC-CGGGGGCTTCSEE
T ss_pred             --------ccCCCCCCEEECCCCCCCC-CccccCCCCCCcC
Confidence                    3468999999999999986 4568888888876


No 86 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=1.8e-17  Score=181.95  Aligned_cols=109  Identities=17%  Similarity=0.204  Sum_probs=70.9

Q ss_pred             cEEEEEecCCCccccC-CccccCCCCCcEEEcccCccccC----CC-CCCCCCCccEEecCCCCCCCCCc----ccc-cC
Q 004020           66 RVTRIQIGGQNIEGTL-PKELNSLSSLTVLEVMKNKLTGQ----IP-SLSGLSSLQEVLFDDNNFTSVPS----DFF-KG  134 (779)
Q Consensus        66 ~v~~l~l~~~~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~----~~-~~~~l~~L~~L~l~~N~l~~~~~----~~~-~~  134 (779)
                      ++++||++++++++.- .+-+..+++|++|+|++|+|+..    +. .+..+++|++|||++|+|+....    ..+ ..
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~   82 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP   82 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence            5788888888887532 23355667788888888877631    12 45677888888888887763211    112 12


Q ss_pred             CCCccEEEcccCCCCCC---CCcccccCCCCCceEeccCceeE
Q 004020          135 LTSLQTISLDYNSFDSW---VIPESLKDATGLQRFSANGANIT  174 (779)
Q Consensus       135 l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~  174 (779)
                      ..+|++|+|++|+++..   .++..+..+++|++|++++|.++
T Consensus        83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~  125 (460)
T d1z7xw1          83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG  125 (460)
T ss_dssp             TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred             CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence            34788888888877531   13455677788888888888764


No 87 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52  E-value=5.3e-15  Score=130.04  Aligned_cols=102  Identities=22%  Similarity=0.312  Sum_probs=73.3

Q ss_pred             EEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCC
Q 004020           69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSF  148 (779)
Q Consensus        69 ~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l  148 (779)
                      .|+|++|+|+ .++ .+..+++|++|+|++|+|+..++.|+.+++|++|++++|+|+.++.  +..+++|++|++++|+|
T Consensus         2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~--~~~l~~L~~L~l~~N~i   77 (124)
T d1dcea3           2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG--VANLPRLQELLLCNNRL   77 (124)
T ss_dssp             EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCC
T ss_pred             EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCc--cccccccCeEECCCCcc
Confidence            5777888887 444 4777778888888888887665567777888888888888877752  77777888888888877


Q ss_pred             CCCCCcccccCCCCCceEeccCceeE
Q 004020          149 DSWVIPESLKDATGLQRFSANGANIT  174 (779)
Q Consensus       149 ~~~~~p~~~~~l~~L~~L~l~~n~l~  174 (779)
                      ........+..+++|+.|++++|.++
T Consensus        78 ~~~~~~~~l~~~~~L~~L~l~~N~i~  103 (124)
T d1dcea3          78 QQSAAIQPLVSCPRLVLLNLQGNSLC  103 (124)
T ss_dssp             CSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred             CCCCCchhhcCCCCCCEEECCCCcCC
Confidence            65333355666777777777777765


No 88 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=4.9e-15  Score=137.03  Aligned_cols=124  Identities=15%  Similarity=0.211  Sum_probs=95.6

Q ss_pred             CcEEEEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcc
Q 004020           65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD  144 (779)
Q Consensus        65 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls  144 (779)
                      -++++|+|++|+|+ .++..+..+++|++|+|++|+|+.. +.|..+++|++|++++|+++.+++..+..+++|++|+|+
T Consensus        18 ~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~   95 (162)
T d1a9na_          18 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT   95 (162)
T ss_dssp             TSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred             CcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc-CCcccCcchhhhhcccccccCCCccccccccccccceec
Confidence            36788899998888 4566667788899999999988754 668888889999999999888888878888889999999


Q ss_pred             cCCCCCCCCcccccCCCCCceEeccCceeEeecCC----CccCCCCCcccEEE
Q 004020          145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPD----FLGGDTIPGLMHLH  193 (779)
Q Consensus       145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~----~~~~~~l~~L~~L~  193 (779)
                      +|+|.....-..+..+++|+.|++++|.++ ..|.    .+.  .+|+|++||
T Consensus        96 ~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~--~lp~L~~LD  145 (162)
T d1a9na_          96 NNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIY--KVPQVRVLD  145 (162)
T ss_dssp             SCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHH--HCTTCSEET
T ss_pred             cccccccccccccccccccchhhcCCCccc-cccchHHHHHH--HCCCcCeeC
Confidence            888875222246778888888888888876 3343    233  577777776


No 89 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46  E-value=1.1e-13  Score=121.55  Aligned_cols=103  Identities=19%  Similarity=0.255  Sum_probs=88.3

Q ss_pred             cEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCc
Q 004020           92 TVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGA  171 (779)
Q Consensus        92 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n  171 (779)
                      ++|+|++|+|+.. +.+.++++|++|++++|+|+.+|+. |..+++|++|++++|+|++  +| .+..+++|+.|++++|
T Consensus         1 R~L~Ls~n~l~~l-~~l~~l~~L~~L~ls~N~l~~lp~~-~~~l~~L~~L~l~~N~i~~--l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           1 RVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN--VD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             SEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCCC--CG-GGTTCSSCCEEECCSS
T ss_pred             CEEEcCCCCCCCC-cccccCCCCCEEECCCCccCcchhh-hhhhhcccccccccccccc--cC-ccccccccCeEECCCC
Confidence            5899999999844 5699999999999999999999864 8899999999999999976  44 5899999999999999


Q ss_pred             eeEeecC-CCccCCCCCcccEEEccCCCCCC
Q 004020          172 NITGTIP-DFLGGDTIPGLMHLHLAFNFLQG  201 (779)
Q Consensus       172 ~l~~~~p-~~~~~~~l~~L~~L~L~~N~l~~  201 (779)
                      +|+.... ..+.  .+++|++|++++|.++.
T Consensus        76 ~i~~~~~~~~l~--~~~~L~~L~l~~N~i~~  104 (124)
T d1dcea3          76 RLQQSAAIQPLV--SCPRLVLLNLQGNSLCQ  104 (124)
T ss_dssp             CCCSSSTTGGGG--GCTTCCEEECTTSGGGG
T ss_pred             ccCCCCCchhhc--CCCCCCEEECCCCcCCc
Confidence            9985432 3454  68999999999999974


No 90 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.44  E-value=3.7e-15  Score=157.00  Aligned_cols=196  Identities=16%  Similarity=0.167  Sum_probs=115.0

Q ss_pred             cCCccccCCCCCcEEEcccCccccCC-----CCCCCCCCccEEecCCCCCCCCCc----------ccccCCCCccEEEcc
Q 004020           80 TLPKELNSLSSLTVLEVMKNKLTGQI-----PSLSGLSSLQEVLFDDNNFTSVPS----------DFFKGLTSLQTISLD  144 (779)
Q Consensus        80 ~~p~~l~~l~~L~~L~Ls~N~l~~~~-----~~~~~l~~L~~L~l~~N~l~~~~~----------~~~~~l~~L~~L~Ls  144 (779)
                      .+..++.+.+.|++|+|++|.|....     ..+...++|+.|+++++.+..+..          ..+..+++|++|+|+
T Consensus        22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~  101 (344)
T d2ca6a1          22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS  101 (344)
T ss_dssp             TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred             HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence            34456777888999999999885421     257778889999998887654321          224567788888888


Q ss_pred             cCCCCCCC---CcccccCCCCCceEeccCceeEeecCCCcc-----------CCCCCcccEEEccCCCCCCcCCCccccC
Q 004020          145 YNSFDSWV---IPESLKDATGLQRFSANGANITGTIPDFLG-----------GDTIPGLMHLHLAFNFLQGPIPLSFGKS  210 (779)
Q Consensus       145 ~N~l~~~~---~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-----------~~~l~~L~~L~L~~N~l~~~~p~~~~~~  210 (779)
                      +|.+....   +...+..+++|+.|++++|.++..-...++           ....+.|+.|++++|+++...-..+   
T Consensus       102 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l---  178 (344)
T d2ca6a1         102 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW---  178 (344)
T ss_dssp             SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHH---
T ss_pred             ccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccc---
Confidence            88875421   223445566777777777765311111110           0023455566666665542111111   


Q ss_pred             CcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCC-----C-CCCCCCCCCcEEEccCCccccc----cChhh
Q 004020          211 SIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGP-----L-PDLSGLSSLQDFSVRDNQLTGI----VPSSL  280 (779)
Q Consensus       211 ~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~-----~-~~~~~l~~L~~L~l~~N~l~~~----~p~~l  280 (779)
                                         ...+..++.|+.|+|++|+++..     + ..+..+++|+.|++++|.|+..    +...+
T Consensus       179 -------------------~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l  239 (344)
T d2ca6a1         179 -------------------AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL  239 (344)
T ss_dssp             -------------------HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred             -------------------cchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccc
Confidence                               12334556677777777776531     1 2355566677777777766432    33455


Q ss_pred             hCCCCCCEEEccCcccc
Q 004020          281 VNLHSLAVVNLTNNLFQ  297 (779)
Q Consensus       281 ~~l~~L~~L~Ls~N~l~  297 (779)
                      ..+++|+.|+|++|.|+
T Consensus       240 ~~~~~L~~L~Ls~n~i~  256 (344)
T d2ca6a1         240 KSWPNLRELGLNDCLLS  256 (344)
T ss_dssp             GGCTTCCEEECTTCCCC
T ss_pred             cccccchhhhhhcCccC
Confidence            56666777777777665


No 91 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44  E-value=3.4e-14  Score=131.26  Aligned_cols=112  Identities=15%  Similarity=0.124  Sum_probs=90.8

Q ss_pred             ccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCC
Q 004020           83 KELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATG  162 (779)
Q Consensus        83 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~  162 (779)
                      +.+.+..+|++|+|++|+|+.++..+..+++|+.|+|++|+|+.++  .|..+++|++|+|++|++.. ..+..+..+++
T Consensus        12 ~~~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~--~~~~l~~L~~L~ls~N~i~~-l~~~~~~~l~~   88 (162)
T d1a9na_          12 AQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD--GFPLLRRLKTLLVNNNRICR-IGEGLDQALPD   88 (162)
T ss_dssp             CEEECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC--CCCCCSSCCEEECCSSCCCE-ECSCHHHHCTT
T ss_pred             HhccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC--CcccCcchhhhhcccccccC-CCccccccccc
Confidence            3467888899999999999877555678899999999999999884  38889999999999999976 34455678899


Q ss_pred             CceEeccCceeEeecC--CCccCCCCCcccEEEccCCCCC
Q 004020          163 LQRFSANGANITGTIP--DFLGGDTIPGLMHLHLAFNFLQ  200 (779)
Q Consensus       163 L~~L~l~~n~l~~~~p--~~~~~~~l~~L~~L~L~~N~l~  200 (779)
                      |+.|++++|+|+. ++  ..+.  .+++|++|++++|.++
T Consensus        89 L~~L~L~~N~i~~-~~~l~~l~--~l~~L~~L~l~~N~i~  125 (162)
T d1a9na_          89 LTELILTNNSLVE-LGDLDPLA--SLKSLTYLCILRNPVT  125 (162)
T ss_dssp             CCEEECCSCCCCC-GGGGGGGG--GCTTCCEEECCSSGGG
T ss_pred             cccceeccccccc-cccccccc--cccccchhhcCCCccc
Confidence            9999999999874 33  2444  6888999999999887


No 92 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43  E-value=3.1e-16  Score=171.83  Aligned_cols=311  Identities=20%  Similarity=0.221  Sum_probs=178.3

Q ss_pred             CCcEEEcccCccccCC--CCCCCCCCccEEecCCCCCCCC----CcccccCCCCccEEEcccCCCCCCC---Cccccc-C
Q 004020           90 SLTVLEVMKNKLTGQI--PSLSGLSSLQEVLFDDNNFTSV----PSDFFKGLTSLQTISLDYNSFDSWV---IPESLK-D  159 (779)
Q Consensus        90 ~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~---~p~~~~-~  159 (779)
                      +|+.||+++|++++..  .-+..+++|++|+|++|.++..    ....+..+++|++|||++|+|....   +...+. .
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~   82 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP   82 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence            6899999999998743  2467789999999999998842    2345678999999999999984211   122332 2


Q ss_pred             CCCCceEeccCceeEee----cCCCccCCCCCcccEEEccCCCCCCcCCCcccc--------------------------
Q 004020          160 ATGLQRFSANGANITGT----IPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK--------------------------  209 (779)
Q Consensus       160 l~~L~~L~l~~n~l~~~----~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------------------------  209 (779)
                      ..+|+.|+|++|+++..    ++..+.  .+++|++|+|++|.++......+..                          
T Consensus        83 ~~~L~~L~L~~n~it~~~~~~l~~~l~--~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  160 (460)
T d1z7xw1          83 SCKIQKLSLQNCCLTGAGCGVLSSTLR--TLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP  160 (460)
T ss_dssp             TCCCCEEECTTSCCBGGGHHHHHHHTT--SCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred             CCCCCEEECCCCCccccccccccchhh--ccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcc
Confidence            35899999999999743    344454  6889999999999876321111100                          


Q ss_pred             --------CCcceeeccCCCCCCC-------------------------CCC-----chhhhcCCCCccEEEeecCcccC
Q 004020          210 --------SSIQTLWLNGQKGDSK-------------------------LNG-----SVAVIQNMTSLTQLWLHGNSFTG  251 (779)
Q Consensus       210 --------~~L~~l~l~~n~~~~~-------------------------~~~-----~~~~~~~l~~L~~L~L~~N~l~~  251 (779)
                              ..++.++++.+.....                         ...     ....+...+.++.+++++|.+..
T Consensus       161 ~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~  240 (460)
T d1z7xw1         161 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD  240 (460)
T ss_dssp             HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccc
Confidence                    1233333333321100                         000     01223345566677777666532


Q ss_pred             C-----CCC-CCCCCCCcEEEccCCccccc----cChhhhCCCCCCEEEccCccccccCCCCCCCcccccccCCCCcccC
Q 004020          252 P-----LPD-LSGLSSLQDFSVRDNQLTGI----VPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLD  321 (779)
Q Consensus       252 ~-----~~~-~~~l~~L~~L~l~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~  321 (779)
                      .     .+. ......++.+++++|.+...    ....+...+.++.+++++|.++......+.....  ........+.
T Consensus       241 ~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~--~~~~~L~~l~  318 (460)
T d1z7xw1         241 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLL--EPGCQLESLW  318 (460)
T ss_dssp             HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHT--STTCCCCEEE
T ss_pred             cccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccc--cccccccccc
Confidence            1     111 33456677777777776532    2234455677777777777765321100000000  0000000000


Q ss_pred             CCCcccCccc-hhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccCcccccc----cccccc-cccc
Q 004020          322 DAGVACDGRV-NVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGT----ISSNFS-RLTS  395 (779)
Q Consensus       322 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~----~p~~~~-~l~~  395 (779)
                      .......... ..+..                            ......+|+.|+|++|++++.    ++..+. ..+.
T Consensus       319 l~~~~l~~~~~~~l~~----------------------------~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~  370 (460)
T d1z7xw1         319 VKSCSFTAACCSHFSS----------------------------VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSV  370 (460)
T ss_dssp             CTTSCCBGGGHHHHHH----------------------------HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCC
T ss_pred             ccccchhhhhhhhccc----------------------------ccccccchhhhheeeecccCcccchhhhhhhcccCC
Confidence            0000000000 00000                            011223688999999998753    344443 4567


Q ss_pred             CCeEeccCccccc----cCCccCCCCCCCCceeccCCcccc
Q 004020          396 LRQLMLSGNELTG----TIPKELTTLPSLEMLDVSNNHLFG  432 (779)
Q Consensus       396 L~~L~Ls~N~l~g----~iP~~l~~l~~L~~L~Ls~N~l~g  432 (779)
                      |++|+|++|+|+.    .++..+..+++|++|||++|+|+.
T Consensus       371 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~  411 (460)
T d1z7xw1         371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD  411 (460)
T ss_dssp             CCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred             CCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCH
Confidence            9999999999974    355666777889999999999875


No 93 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42  E-value=7e-15  Score=149.99  Aligned_cols=223  Identities=14%  Similarity=0.193  Sum_probs=145.8

Q ss_pred             EEEecCCCccccCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCC-CcccccCCCCccEEEcccCC
Q 004020           69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSV-PSDFFKGLTSLQTISLDYNS  147 (779)
Q Consensus        69 ~l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~  147 (779)
                      .|||+++.+.......+.. ..+..+.++...+...+.......+|++|||+++.++.. ....+.++++|++|+|+++.
T Consensus         4 ~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~   82 (284)
T d2astb2           4 TLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLR   82 (284)
T ss_dssp             EEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCB
T ss_pred             EEECCCCCCCchHHHHHHh-ccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccC
Confidence            6788877775433333322 245666777666654444455566788888888877643 33456778888888888887


Q ss_pred             CCCCCCcccccCCCCCceEeccCc-eeEeecCCCccCCCCCcccEEEccCC-CCCCc-CCCcccc--CCcceeeccCCCC
Q 004020          148 FDSWVIPESLKDATGLQRFSANGA-NITGTIPDFLGGDTIPGLMHLHLAFN-FLQGP-IPLSFGK--SSIQTLWLNGQKG  222 (779)
Q Consensus       148 l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~--~~L~~l~l~~n~~  222 (779)
                      +.. ..+..+..+++|+.|++++| .++...-..+. ..+++|++|+++++ .++.. +...+..  ..|+.|+++++..
T Consensus        83 l~~-~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~-~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~  160 (284)
T d2astb2          83 LSD-PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL-SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK  160 (284)
T ss_dssp             CCH-HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH-HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred             CCc-HHHHHHhcCCCCcCccccccccccccccchhh-HHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence            754 45566777888888888885 44421111111 14678888888875 34421 1112222  4678888876532


Q ss_pred             CCCCCCchhhhcCCCCccEEEeecC-cccCC-CCCCCCCCCCcEEEccCC-ccccccChhhhCCCCCCEEEccCc
Q 004020          223 DSKLNGSVAVIQNMTSLTQLWLHGN-SFTGP-LPDLSGLSSLQDFSVRDN-QLTGIVPSSLVNLHSLAVVNLTNN  294 (779)
Q Consensus       223 ~~~~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~l~~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~Ls~N  294 (779)
                      .....+......++++|++|+|++| .+++. +..+..+++|++|++++| .+++.....++++++|+.|+++++
T Consensus       161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~  235 (284)
T d2astb2         161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI  235 (284)
T ss_dssp             GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred             ccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence            2222222334457899999999986 46653 345888999999999995 687777778899999999999876


No 94 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34  E-value=5e-14  Score=143.56  Aligned_cols=250  Identities=13%  Similarity=0.154  Sum_probs=153.4

Q ss_pred             cEEEcccCccccCCC-CCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccC
Q 004020           92 TVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANG  170 (779)
Q Consensus        92 ~~L~Ls~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~  170 (779)
                      ++|||+++.+..... .+.. ..+..+.++...+...... .....+|++|||+++.+....++..+.++++|++|++++
T Consensus         3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~~-~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~   80 (284)
T d2astb2           3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG   80 (284)
T ss_dssp             SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred             CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchhh-hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence            478999887753221 1111 2355667776666554433 335668999999988875434556678889999999999


Q ss_pred             ceeEeecCCCccCCCCCcccEEEccCC-CCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecC-c
Q 004020          171 ANITGTIPDFLGGDTIPGLMHLHLAFN-FLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGN-S  248 (779)
Q Consensus       171 n~l~~~~p~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N-~  248 (779)
                      |.++...+..++  .+++|++|+|+++ .++...   +                      ......+++|++|+|+++ .
T Consensus        81 ~~l~~~~~~~l~--~~~~L~~L~Ls~c~~itd~~---l----------------------~~l~~~~~~L~~L~ls~c~~  133 (284)
T d2astb2          81 LRLSDPIVNTLA--KNSNLVRLNLSGCSGFSEFA---L----------------------QTLLSSCSRLDELNLSWCFD  133 (284)
T ss_dssp             CBCCHHHHHHHT--TCTTCSEEECTTCBSCCHHH---H----------------------HHHHHHCTTCCEEECCCCTT
T ss_pred             cCCCcHHHHHHh--cCCCCcCccccccccccccc---c----------------------chhhHHHHhccccccccccc
Confidence            988777777775  6788999998885 454210   0                      011235677888888774 3


Q ss_pred             ccCC-CC-CC-CCCCCCcEEEccCC--ccccc-cChhhhCCCCCCEEEccCcc-ccccCCCCCCCcccccccCCCCcccC
Q 004020          249 FTGP-LP-DL-SGLSSLQDFSVRDN--QLTGI-VPSSLVNLHSLAVVNLTNNL-FQGQTPKFNSPVRFDMAKGSNSFCLD  321 (779)
Q Consensus       249 l~~~-~~-~~-~~l~~L~~L~l~~N--~l~~~-~p~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~~~~~~~~~~~~~~  321 (779)
                      ++.. +. .+ ...++|+.|+++++  .++.. +...+.++++|++|+|++|. +++.....                  
T Consensus       134 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~------------------  195 (284)
T d2astb2         134 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE------------------  195 (284)
T ss_dssp             CCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG------------------
T ss_pred             cccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhh------------------
Confidence            4321 11 12 22467888888764  23322 33444567888888888753 44322110                  


Q ss_pred             CCCcccCccchhhhhhcccCCCchhcccccCCCCCCCCCCCccccCCCCCeEEEEccC-ccccccccccccccccCCeEe
Q 004020          322 DAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKN-LGLSGTISSNFSRLTSLRQLM  400 (779)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~  400 (779)
                                                                  ....++|++|+|++ +.+++.....++++++|+.|+
T Consensus       196 --------------------------------------------l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~  231 (284)
T d2astb2         196 --------------------------------------------FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQ  231 (284)
T ss_dssp             --------------------------------------------GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred             --------------------------------------------hcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEe
Confidence                                                        01123688888888 467777777788889999999


Q ss_pred             ccCccccccCCccCCCCCCCCceeccCCcccccCC
Q 004020          401 LSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVP  435 (779)
Q Consensus       401 Ls~N~l~g~iP~~l~~l~~L~~L~Ls~N~l~g~iP  435 (779)
                      ++++--.+.++.-...   +..|++..+++++..+
T Consensus       232 l~~~~~d~~l~~l~~~---lp~L~i~~~~ls~~~~  263 (284)
T d2astb2         232 VFGIVPDGTLQLLKEA---LPHLQINCSHFTTIAR  263 (284)
T ss_dssp             CTTSSCTTCHHHHHHH---STTSEESCCCSCCTTC
T ss_pred             eeCCCCHHHHHHHHHh---CccccccCccCCCCCC
Confidence            9887222222221122   4445667788877654


No 95 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.28  E-value=8.7e-14  Score=146.26  Aligned_cols=211  Identities=18%  Similarity=0.202  Sum_probs=143.2

Q ss_pred             CCcEEEEEecCCCccc----cCCccccCCCCCcEEEcccCccccCC-----------CCCCCCCCccEEecCCCCCCCCC
Q 004020           64 SNRVTRIQIGGQNIEG----TLPKELNSLSSLTVLEVMKNKLTGQI-----------PSLSGLSSLQEVLFDDNNFTSVP  128 (779)
Q Consensus        64 ~~~v~~l~l~~~~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~-----------~~~~~l~~L~~L~l~~N~l~~~~  128 (779)
                      ...+++|+|++|.+..    .+...+...++|+.|+++++.+....           ..+..+++|+.|+|++|.++...
T Consensus        30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~  109 (344)
T d2ca6a1          30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA  109 (344)
T ss_dssp             CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred             CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence            3568999999998854    34456778899999999987654221           13567899999999999998753


Q ss_pred             c----ccccCCCCccEEEcccCCCCCCC------------CcccccCCCCCceEeccCceeEee----cCCCccCCCCCc
Q 004020          129 S----DFFKGLTSLQTISLDYNSFDSWV------------IPESLKDATGLQRFSANGANITGT----IPDFLGGDTIPG  188 (779)
Q Consensus       129 ~----~~~~~l~~L~~L~Ls~N~l~~~~------------~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~~~l~~  188 (779)
                      .    ..+..+++|++|++++|.+....            ........+.|+.+.+++|+++..    +...+.  ..+.
T Consensus       110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~--~~~~  187 (344)
T d2ca6a1         110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ--SHRL  187 (344)
T ss_dssp             HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH--HCTT
T ss_pred             ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhh--hhhh
Confidence            3    34557899999999999873100            001124567899999999987522    222232  4678


Q ss_pred             ccEEEccCCCCCCcCCCccccCCcceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCC----C-CCCCCCCCCc
Q 004020          189 LMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGP----L-PDLSGLSSLQ  263 (779)
Q Consensus       189 L~~L~L~~N~l~~~~p~~~~~~~L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~----~-~~~~~l~~L~  263 (779)
                      |++|+|++|+++..-...+                     ....+..+++|+.|+|++|.++..    + ..+..+++|+
T Consensus       188 L~~L~L~~n~i~~~g~~~~---------------------l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~  246 (344)
T d2ca6a1         188 LHTVKMVQNGIRPEGIEHL---------------------LLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR  246 (344)
T ss_dssp             CCEEECCSSCCCHHHHHHH---------------------HHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred             hcccccccccccccccccc---------------------hhhhhcchhhhcccccccccccccccccccccccccccch
Confidence            9999999999873210000                     011244678899999999988642    1 2366788999


Q ss_pred             EEEccCCccccccChhh----hC--CCCCCEEEccCcccc
Q 004020          264 DFSVRDNQLTGIVPSSL----VN--LHSLAVVNLTNNLFQ  297 (779)
Q Consensus       264 ~L~l~~N~l~~~~p~~l----~~--l~~L~~L~Ls~N~l~  297 (779)
                      +|+|++|.|++.-...+    ..  .+.|+.|+|++|+++
T Consensus       247 ~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~  286 (344)
T d2ca6a1         247 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE  286 (344)
T ss_dssp             EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred             hhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCC
Confidence            99999999875433333    22  245777777777664


No 96 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.26  E-value=9.5e-14  Score=132.92  Aligned_cols=125  Identities=21%  Similarity=0.286  Sum_probs=68.3

Q ss_pred             ccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCceeEeecCCCccCCCCCcccEEEccCCCCCCcCCCccccCC
Q 004020          132 FKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSS  211 (779)
Q Consensus       132 ~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~  211 (779)
                      +..+++|++|+|++|+|+.  ++ .+..+++|+.|++++|.|+ .+|..+.  .+++|++|++++|+++.. +       
T Consensus        44 l~~L~~L~~L~Ls~n~I~~--i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~--~~~~L~~L~l~~N~i~~l-~-------  109 (198)
T d1m9la_          44 LSTLKACKHLALSTNNIEK--IS-SLSGMENLRILSLGRNLIK-KIENLDA--VADTLEELWISYNQIASL-S-------  109 (198)
T ss_dssp             HHHTTTCCEEECSEEEESC--CC-CHHHHTTCCEEECCEEEEC-SCSSHHH--HHHHCCEEECSEEECCCH-H-------
T ss_pred             HhcccccceeECcccCCCC--cc-cccCCccccChhhcccccc-ccccccc--cccccccccccccccccc-c-------
Confidence            4444444555555554443  22 2444455555555555544 3333332  244566666666666521 1       


Q ss_pred             cceeeccCCCCCCCCCCchhhhcCCCCccEEEeecCcccCCCC--CCCCCCCCcEEEccCCccccccCh----------h
Q 004020          212 IQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP--DLSGLSSLQDFSVRDNQLTGIVPS----------S  279 (779)
Q Consensus       212 L~~l~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~----------~  279 (779)
                                          .+..+++|+.|+|++|+++....  .+..+++|+.|++++|++....+.          .
T Consensus       110 --------------------~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~v  169 (198)
T d1m9la_         110 --------------------GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV  169 (198)
T ss_dssp             --------------------HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHH
T ss_pred             --------------------cccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHH
Confidence                                13345667777777777765432  366677777777777776544332          2


Q ss_pred             hhCCCCCCEEE
Q 004020          280 LVNLHSLAVVN  290 (779)
Q Consensus       280 l~~l~~L~~L~  290 (779)
                      +..+++|+.||
T Consensus       170 i~~lp~L~~LD  180 (198)
T d1m9la_         170 VKRLPNLKKLD  180 (198)
T ss_dssp             HHHCSSCCEES
T ss_pred             HHHCCCcCEeC
Confidence            66788888876


No 97 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25  E-value=6.4e-12  Score=114.87  Aligned_cols=101  Identities=19%  Similarity=0.260  Sum_probs=74.6

Q ss_pred             EEecCCCccccCCccccCCCCCcEEEcccC-ccccCCC-CCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCC
Q 004020           70 IQIGGQNIEGTLPKELNSLSSLTVLEVMKN-KLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNS  147 (779)
Q Consensus        70 l~l~~~~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~  147 (779)
                      ++++++++. .+|..+..+++|++|++++| .|+.+.+ +|.++++|+.|+|++|+|+.+++++|..+++|++|+|++|+
T Consensus        13 l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~   91 (156)
T d2ifga3          13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA   91 (156)
T ss_dssp             EECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred             EEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence            344455555 56777888899999999766 4877665 78999999999999999999988889999999999999999


Q ss_pred             CCCCCCcccccCCCCCceEeccCcee
Q 004020          148 FDSWVIPESLKDATGLQRFSANGANI  173 (779)
Q Consensus       148 l~~~~~p~~~~~l~~L~~L~l~~n~l  173 (779)
                      |+. ..+..|. ..+|+.|+|++|.+
T Consensus        92 l~~-l~~~~~~-~~~l~~L~L~~Np~  115 (156)
T d2ifga3          92 LES-LSWKTVQ-GLSLQELVLSGNPL  115 (156)
T ss_dssp             CSC-CCSTTTC-SCCCCEEECCSSCC
T ss_pred             Ccc-cChhhhc-cccccccccCCCcc
Confidence            875 2223332 23455555555554


No 98 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24  E-value=1.2e-11  Score=113.09  Aligned_cols=110  Identities=15%  Similarity=0.198  Sum_probs=91.4

Q ss_pred             CCCCCcEEEcccCccccCCCCCCCCCCccEEecCCC-CCCCCCcccccCCCCccEEEcccCCCCCCCCcccccCCCCCce
Q 004020           87 SLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDN-NFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQR  165 (779)
Q Consensus        87 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~  165 (779)
                      .....+.++.+++.+...+..+..+++|++|++++| .|+.++++.|.++++|++|+|++|+|+. +.+..|..+++|+.
T Consensus         6 ~c~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~-i~~~~f~~l~~L~~   84 (156)
T d2ifga3           6 CPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF-VAPDAFHFTPRLSR   84 (156)
T ss_dssp             CCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE-ECTTGGGSCSCCCE
T ss_pred             CcCCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCC-cccccccccccccc
Confidence            344566789999999877778999999999999766 5999999999999999999999999986 56788999999999


Q ss_pred             EeccCceeEeecCCCccCCCCCcccEEEccCCCCC
Q 004020          166 FSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQ  200 (779)
Q Consensus       166 L~l~~n~l~~~~p~~~~~~~l~~L~~L~L~~N~l~  200 (779)
                      |+|++|+|+...++.+   ....|++|+|++|.+.
T Consensus        85 L~Ls~N~l~~l~~~~~---~~~~l~~L~L~~Np~~  116 (156)
T d2ifga3          85 LNLSFNALESLSWKTV---QGLSLQELVLSGNPLH  116 (156)
T ss_dssp             EECCSSCCSCCCSTTT---CSCCCCEEECCSSCCC
T ss_pred             eeccCCCCcccChhhh---ccccccccccCCCccc
Confidence            9999999984444444   3447889999999885


No 99 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.23  E-value=1.4e-14  Score=138.77  Aligned_cols=119  Identities=21%  Similarity=0.243  Sum_probs=98.0

Q ss_pred             cCCccccCCCCCcEEEcccCccccCCCCCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCcccccC
Q 004020           80 TLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKD  159 (779)
Q Consensus        80 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~  159 (779)
                      .++.+|..+++|++|+|++|+|+.+ +.+.++++|++|+|++|+|+.++. .+..+++|++|++++|+++.  + ..+..
T Consensus        39 ~l~~sl~~L~~L~~L~Ls~n~I~~i-~~l~~l~~L~~L~Ls~N~i~~i~~-~~~~~~~L~~L~l~~N~i~~--l-~~~~~  113 (198)
T d1m9la_          39 KMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIKKIEN-LDAVADTLEELWISYNQIAS--L-SGIEK  113 (198)
T ss_dssp             CCHHHHHHTTTCCEEECSEEEESCC-CCHHHHTTCCEEECCEEEECSCSS-HHHHHHHCCEEECSEEECCC--H-HHHHH
T ss_pred             hhhhHHhcccccceeECcccCCCCc-ccccCCccccChhhcccccccccc-cccccccccccccccccccc--c-ccccc
Confidence            5667899999999999999999854 678999999999999999999874 35556789999999999975  3 45888


Q ss_pred             CCCCceEeccCceeEeecC-CCccCCCCCcccEEEccCCCCCCcCCC
Q 004020          160 ATGLQRFSANGANITGTIP-DFLGGDTIPGLMHLHLAFNFLQGPIPL  205 (779)
Q Consensus       160 l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~L~~N~l~~~~p~  205 (779)
                      +++|+.|++++|+|+.... ..+.  .+++|++|+|++|.++...+.
T Consensus       114 l~~L~~L~L~~N~i~~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~  158 (198)
T d1m9la_         114 LVNLRVLYMSNNKITNWGEIDKLA--ALDKLEDLLLAGNPLYNDYKE  158 (198)
T ss_dssp             HHHSSEEEESEEECCCHHHHHHHT--TTTTCSEEEECSSHHHHHHCT
T ss_pred             cccccccccccchhcccccccccc--CCCccceeecCCCccccCccc
Confidence            9999999999999984322 3454  689999999999998754443


No 100
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.51  E-value=2.1e-07  Score=92.28  Aligned_cols=151  Identities=16%  Similarity=0.105  Sum_probs=103.1

Q ss_pred             HHHHHhhcCCcccceecccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCC-CCccceEeeEEEeCC
Q 004020          583 QVLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDGN  661 (779)
Q Consensus       583 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~  661 (779)
                      .++....+.|+..+..+-++.+.||+... +++.+++|+.....  ......+.+|...+..+. +--+.+++.+...++
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~--~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~   83 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRY--KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG   83 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGG--TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCc--ccchhhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence            45666667887766655455578999864 46667888875443  112234677888877764 434677888888888


Q ss_pred             eEEEEEEecCCCChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC----------------------------
Q 004020          662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA----------------------------  713 (779)
Q Consensus       662 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----------------------------  713 (779)
                      ..++||++++|.++.+.....          .....++.++++.+..||+..                            
T Consensus        84 ~~~lv~~~l~G~~~~~~~~~~----------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (263)
T d1j7la_          84 WSNLLMSEADGVLCSEEYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV  153 (263)
T ss_dssp             EEEEEEECCSSEEHHHHTTTC----------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred             ceEEEEEeccccccccccccc----------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhh
Confidence            999999999998876543211          112334556666666676421                            


Q ss_pred             ----------------------------CCCcEEcCCCCCCEEEcCCCcEEEEeeccceec
Q 004020          714 ----------------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA  746 (779)
Q Consensus       714 ----------------------------~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  746 (779)
                                                  ...++|+|+.|.||++++++.+-|+||+.+..-
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g  214 (263)
T d1j7la_         154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA  214 (263)
T ss_dssp             CGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             hhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccC
Confidence                                        112789999999999998766679999987653


No 101
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31  E-value=4.9e-09  Score=95.93  Aligned_cols=66  Identities=12%  Similarity=0.204  Sum_probs=31.7

Q ss_pred             CCCCCccEEecCCCCCCCCCc--ccccCCCCccEEEcccCCCCCCCCcccccCCCCCceEeccCceeEe
Q 004020          109 SGLSSLQEVLFDDNNFTSVPS--DFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITG  175 (779)
Q Consensus       109 ~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~  175 (779)
                      .++++|++|+|++|+|+.+.+  ..+..+++|+.|+|++|+|+. ..+-.+....+|+.|++++|.++.
T Consensus        62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~  129 (162)
T d1koha1          62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSD  129 (162)
T ss_dssp             HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred             HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCc
Confidence            345555555555555555432  334455555555555555543 111122233345555555555543


No 102
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.04  E-value=6e-06  Score=80.93  Aligned_cols=132  Identities=19%  Similarity=0.157  Sum_probs=87.0

Q ss_pred             eeccccc-EEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCC--CccceEeeEEEeCCeEEEEEEecCCC
Q 004020          597 VLGRGGF-GTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH--RHLVGLLGYCLDGNERLLVYEYMPQG  673 (779)
Q Consensus       597 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g  673 (779)
                      .+..|.. +.||+....++..+++|......     ...+.+|...++.+..  --+.+++.+..+++..++||||++|.
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-----~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ   91 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-----HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecc
Confidence            4455543 67999988888888999765432     1246677777776642  33667788888888899999999886


Q ss_pred             ChhhHhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHcCC----------------------------------------
Q 004020          674 TLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA----------------------------------------  713 (779)
Q Consensus       674 sL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----------------------------------------  713 (779)
                      ++.+..          ...   ...+.++.+.|.-||+..                                        
T Consensus        92 ~~~~~~----------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (255)
T d1nd4a_          92 DLLSSH----------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP  158 (255)
T ss_dssp             ETTTSC----------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred             cccccc----------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHH
Confidence            653311          110   112223333344444210                                        


Q ss_pred             ---------------CCCcEEcCCCCCCEEEcCCCcEEEEeeccceec
Q 004020          714 ---------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA  746 (779)
Q Consensus       714 ---------------~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  746 (779)
                                     ...++|+|+.|.||+++++..+-|+||+.+..-
T Consensus       159 ~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g  206 (255)
T d1nd4a_         159 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  206 (255)
T ss_dssp             HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcccC
Confidence                           123799999999999998766789999987653


No 103
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.00  E-value=4.1e-07  Score=82.78  Aligned_cols=87  Identities=18%  Similarity=0.093  Sum_probs=67.6

Q ss_pred             cCCccccCCCCCcEEEcccCccccCCC---CCCCCCCccEEecCCCCCCCCCcccccCCCCccEEEcccCCCCCCCCc--
Q 004020           80 TLPKELNSLSSLTVLEVMKNKLTGQIP---SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIP--  154 (779)
Q Consensus        80 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~---~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p--  154 (779)
                      .++..+..+++|++|+|++|+|+...+   .+..+++|+.|+|++|+++.+++-.+....+|++|+|++|.+.. ...  
T Consensus        56 ~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~-~~~~~  134 (162)
T d1koha1          56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD-TFRDQ  134 (162)
T ss_dssp             HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSS-SSSSH
T ss_pred             hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCc-Ccccc
Confidence            444455678999999999999987643   36789999999999999999988656666789999999999965 222  


Q ss_pred             -----ccccCCCCCceEe
Q 004020          155 -----ESLKDATGLQRFS  167 (779)
Q Consensus       155 -----~~~~~l~~L~~L~  167 (779)
                           ..+..+++|+.||
T Consensus       135 ~~y~~~i~~~~P~L~~LD  152 (162)
T d1koha1         135 STYISAIRERFPKLLRLD  152 (162)
T ss_dssp             HHHHHHHHTTSTTCCEET
T ss_pred             hhHHHHHHHHCCCCCEEC
Confidence                 2355567777665


No 104
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.59  E-value=0.0001  Score=76.86  Aligned_cols=78  Identities=13%  Similarity=0.118  Sum_probs=49.4

Q ss_pred             cceecccccEEEEEEEEcC-CcEEEEEEecccccC-----hhHHHHHHHHHHHHHcCC-C--CccceEeeEEEeCCeEEE
Q 004020          595 ENVLGRGGFGTVYKGELHD-GTKIAVKRMESAVVS-----EKGFAEFKSEIAVLTKVR-H--RHLVGLLGYCLDGNERLL  665 (779)
Q Consensus       595 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~l  665 (779)
                      .+.||.|....||++...+ ++.+++|.-......     .....+...|.+.++.+. +  ..+++++.+  +.+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            3578999999999997654 678999975432110     112234567888877663 2  345555543  5566789


Q ss_pred             EEEecCCCC
Q 004020          666 VYEYMPQGT  674 (779)
Q Consensus       666 v~e~~~~gs  674 (779)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999998754


No 105
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.25  E-value=2.5e-05  Score=70.85  Aligned_cols=64  Identities=19%  Similarity=0.144  Sum_probs=40.1

Q ss_pred             hcCCCCccEEEeecCcccCCC-----CCCCCCCCCcEEEccCCcccc-------ccChhhhCCCCCCEEEccCccc
Q 004020          233 IQNMTSLTQLWLHGNSFTGPL-----PDLSGLSSLQDFSVRDNQLTG-------IVPSSLVNLHSLAVVNLTNNLF  296 (779)
Q Consensus       233 ~~~l~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~l~~N~l~~-------~~p~~l~~l~~L~~L~Ls~N~l  296 (779)
                      +...+.|+.|+|++|.++..-     ..+...++|++|++++|.+..       .+...+...++|+.|+++.+..
T Consensus        68 L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~  143 (167)
T d1pgva_          68 IETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM  143 (167)
T ss_dssp             HHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred             hhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence            334566777777777665421     125556777777777775442       1445566678888888877654


No 106
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.18  E-value=4.4e-05  Score=69.15  Aligned_cols=83  Identities=10%  Similarity=0.057  Sum_probs=36.2

Q ss_pred             cEEEEEecCC-Ccccc----CCccccCCCCCcEEEcccCccccCC--C---CCCCCCCccEEecCCCCCCCC----Cccc
Q 004020           66 RVTRIQIGGQ-NIEGT----LPKELNSLSSLTVLEVMKNKLTGQI--P---SLSGLSSLQEVLFDDNNFTSV----PSDF  131 (779)
Q Consensus        66 ~v~~l~l~~~-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~--~---~~~~l~~L~~L~l~~N~l~~~----~~~~  131 (779)
                      ++++|+|+++ .++..    +-.++...++|++|+|++|.++...  .   .+...+.|++|+|++|.++.-    ....
T Consensus        16 ~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~a   95 (167)
T d1pgva_          16 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS   95 (167)
T ss_dssp             SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred             CCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHH
Confidence            4555555542 23221    2233444555555555555554211  1   133344555555555555421    1112


Q ss_pred             ccCCCCccEEEcccCCC
Q 004020          132 FKGLTSLQTISLDYNSF  148 (779)
Q Consensus       132 ~~~l~~L~~L~Ls~N~l  148 (779)
                      +...+.|++|+|++|++
T Consensus        96 L~~n~sL~~L~l~~n~~  112 (167)
T d1pgva_          96 TLVTQSIVEFKADNQRQ  112 (167)
T ss_dssp             TTTTCCCSEEECCCCSS
T ss_pred             HHhCCcCCEEECCCCcC
Confidence            33344455555554443


No 107
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.96  E-value=0.0011  Score=66.87  Aligned_cols=138  Identities=12%  Similarity=0.036  Sum_probs=77.9

Q ss_pred             EEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCccc--eEe-----eEEEeCCeEEEEEEecCCCChh
Q 004020          604 GTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLV--GLL-----GYCLDGNERLLVYEYMPQGTLS  676 (779)
Q Consensus       604 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv--~~~-----~~~~~~~~~~lv~e~~~~gsL~  676 (779)
                      -.||+++..+|+.|++|+......   ..+++..|...+..+....+.  ...     ..+...+..+.++++++|..+.
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~~---s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~  112 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFE  112 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECC
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCCC---CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCC
Confidence            589999999999999999876532   234567788888777422221  111     2234456778999999874321


Q ss_pred             h-----H---------hhh----cccCCCCCCCHH----------------------HHHHHHHHHHHHHHHHH-cCCCC
Q 004020          677 R-----H---------LFN----RKEEGLKPLEWT----------------------RRLTIALDVARGVEYLH-GLAHQ  715 (779)
Q Consensus       677 ~-----~---------l~~----~~~~~~~~~~~~----------------------~~~~i~~qi~~~L~~LH-~~~~~  715 (779)
                      .     +         ++.    .........+..                      .....+.++...+.-.- +....
T Consensus       113 ~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~  192 (325)
T d1zyla1         113 ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTV  192 (325)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCc
Confidence            1     0         111    000001111111                      11222223333222221 11235


Q ss_pred             CcEEcCCCCCCEEEcCCCcEEEEeeccceec
Q 004020          716 SFIHRDLKPSNILLGDDMRAKVADFGLVRLA  746 (779)
Q Consensus       716 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  746 (779)
                      ++||+|+.|.|||++++  ..++||+-+..-
T Consensus       193 ~liHgDlh~~NvL~~~~--~~~IDFdd~~~g  221 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG--PMFVDLDDARNG  221 (325)
T ss_dssp             EECCSSCSGGGEEESSS--EEECCCTTCCEE
T ss_pred             eeecCCCCcccEEEeCC--ceEEechhcccC
Confidence            78999999999999743  468999987653


No 108
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.69  E-value=0.0018  Score=64.80  Aligned_cols=161  Identities=11%  Similarity=0.013  Sum_probs=84.6

Q ss_pred             eeHHHHHHhhcCCccccee-----cccccEEEEEEEEcCCcEEEEEEecccccChhHHHHHHHHHHHHHcCCCCc-----
Q 004020          580 ISIQVLRNVTNNFSEENVL-----GRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH-----  649 (779)
Q Consensus       580 ~~~~~~~~~~~~~~~~~~l-----g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-----  649 (779)
                      .+.+++..+..+|.+.+..     ..|---+.|+.+..+| .+++|++....    ..+++..|++++..+...+     
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~----~~~~l~~~~~~l~~L~~~g~pvp~   77 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPL   77 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC----CHHHHHHHHHHHHhhhhccccccc
Confidence            3567788888889775444     3555577899987765 48899876432    1234555666776664222     


Q ss_pred             cceEe---eEEEeCCeEEEEEEecCCCChhhH--------------hhhcc----cCCCCCCC-----------------
Q 004020          650 LVGLL---GYCLDGNERLLVYEYMPQGTLSRH--------------LFNRK----EEGLKPLE-----------------  691 (779)
Q Consensus       650 iv~~~---~~~~~~~~~~lv~e~~~~gsL~~~--------------l~~~~----~~~~~~~~-----------------  691 (779)
                      .+...   .+....+....++.++.+......              ++...    ........                 
T Consensus        78 pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (316)
T d2ppqa1          78 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE  157 (316)
T ss_dssp             BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred             cceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhh
Confidence            22111   112234456677777766432110              00000    00000000                 


Q ss_pred             -HHHHHHHHHHHHHHHHHHHc-CCCCCcEEcCCCCCCEEEcCCCcEEEEeecccee
Q 004020          692 -WTRRLTIALDVARGVEYLHG-LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL  745 (779)
Q Consensus       692 -~~~~~~i~~qi~~~L~~LH~-~~~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  745 (779)
                       .......+..+...+.-.+. .-..++||+|+.++||+++.+...-|+||+.+..
T Consensus       158 ~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         158 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence             00011222222222222221 1246899999999999999887778999998764


No 109
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.49  E-value=0.0036  Score=64.73  Aligned_cols=73  Identities=15%  Similarity=0.161  Sum_probs=48.8

Q ss_pred             cceecccccEEEEEEEEcC--------CcEEEEEEecccccChhHHHHHHHHHHHHHcCC-CCccceEeeEEEeCCeEEE
Q 004020          595 ENVLGRGGFGTVYKGELHD--------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDGNERLL  665 (779)
Q Consensus       595 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l  665 (779)
                      .+.|+-|-.-.+|++...+        .+.|.+++.-..    .......+|..+++.+. +.-..++++++..    .+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~----~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~  118 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GR  118 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc----chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ce
Confidence            4678888889999998653        346677665421    12234567888888885 4434577776642    68


Q ss_pred             EEEecCCCCh
Q 004020          666 VYEYMPQGTL  675 (779)
Q Consensus       666 v~e~~~~gsL  675 (779)
                      ||||++|..+
T Consensus       119 I~efi~g~~l  128 (395)
T d1nw1a_         119 LEEYIPSRPL  128 (395)
T ss_dssp             EECCCCEEEC
T ss_pred             EEEEeccccC
Confidence            9999987544


No 110
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.16  E-value=0.00011  Score=66.25  Aligned_cols=111  Identities=13%  Similarity=0.170  Sum_probs=52.1

Q ss_pred             cCCCCCcEEEccc-CccccCC-----CCCCCCCCccEEecCCCCCCCCC----cccccCCCCccEEEcccCCCCCCC---
Q 004020           86 NSLSSLTVLEVMK-NKLTGQI-----PSLSGLSSLQEVLFDDNNFTSVP----SDFFKGLTSLQTISLDYNSFDSWV---  152 (779)
Q Consensus        86 ~~l~~L~~L~Ls~-N~l~~~~-----~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~---  152 (779)
                      .+.+.|++|+|++ +.++...     .++...++|++|+|++|.++.-.    ...+...+.|+.|++++|.+....   
T Consensus        14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~   93 (166)
T d1io0a_          14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA   93 (166)
T ss_dssp             TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred             hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence            4455666666665 3343211     13445566666666666655321    123444556666666666653211   


Q ss_pred             CcccccCCCCCceEec--cCceeEe----ecCCCccCCCCCcccEEEccCCC
Q 004020          153 IPESLKDATGLQRFSA--NGANITG----TIPDFLGGDTIPGLMHLHLAFNF  198 (779)
Q Consensus       153 ~p~~~~~l~~L~~L~l--~~n~l~~----~~p~~~~~~~l~~L~~L~L~~N~  198 (779)
                      +-..+...++|+.++|  ++|.+..    .+.+.+.  ..+.|++|+++.+.
T Consensus        94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~--~n~~L~~L~l~~~~  143 (166)
T d1io0a_          94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLE--KNTTLLKFGYHFTQ  143 (166)
T ss_dssp             HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHH--HCSSCCEEECCCSS
T ss_pred             HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHH--hCCCcCEEeCcCCC
Confidence            1133444455554333  3334421    1222222  34556666665544


No 111
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.01  E-value=0.00028  Score=63.61  Aligned_cols=65  Identities=15%  Similarity=0.156  Sum_probs=41.1

Q ss_pred             hcCCCCccEEEeecCcccCCC-----CCCCCCCCCcEEEc--cCCcccc----ccChhhhCCCCCCEEEccCcccc
Q 004020          233 IQNMTSLTQLWLHGNSFTGPL-----PDLSGLSSLQDFSV--RDNQLTG----IVPSSLVNLHSLAVVNLTNNLFQ  297 (779)
Q Consensus       233 ~~~l~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~l--~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~  297 (779)
                      +...++++.|++++|.++..-     ..+...++|+.++|  ++|.+..    .+...+...++|+.|+++.|...
T Consensus        70 l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~~  145 (166)
T d1io0a_          70 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG  145 (166)
T ss_dssp             HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred             HhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCCc
Confidence            334567777777777765321     23556677776555  4556643    34566677888999988877643


No 112
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=21.21  E-value=16  Score=35.41  Aligned_cols=25  Identities=24%  Similarity=0.335  Sum_probs=22.4

Q ss_pred             cCCCCCCEEEcCCCcEEEEeeccce
Q 004020          720 RDLKPSNILLGDDMRAKVADFGLVR  744 (779)
Q Consensus       720 rDlkp~NIll~~~~~~kl~DFG~a~  744 (779)
                      +|=.++||||+.+|++.=+|||..-
T Consensus       220 gDRH~~NILi~~~G~l~HIDFG~il  244 (369)
T d1e7ua4         220 GDRHNDNIMISETGNLFHIDFGHIL  244 (369)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             CCCCCCeeEEeCCCCEEecchhhhh
Confidence            6889999999999999999999864


Done!