Query 004023
Match_columns 778
No_of_seqs 219 out of 771
Neff 4.7
Searched_HMMs 46136
Date Thu Mar 28 16:11:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004023.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004023hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 7E-258 2E-262 2177.2 63.8 758 21-778 63-852 (852)
2 PLN00150 potassium ion transpo 100.0 3E-251 6E-256 2123.4 62.7 752 21-778 8-779 (779)
3 PLN00148 potassium transporter 100.0 6E-249 1E-253 2105.4 62.5 723 55-778 16-785 (785)
4 PLN00149 potassium transporter 100.0 1E-248 3E-253 2104.6 64.2 738 37-778 1-779 (779)
5 TIGR00794 kup potassium uptake 100.0 7E-230 2E-234 1938.9 60.4 686 63-778 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 7E-211 1E-215 1760.7 55.9 609 62-778 11-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 2E-196 5E-201 1631.0 46.1 532 64-636 1-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 3E-194 6E-199 1590.2 49.8 610 60-778 15-627 (627)
9 TIGR00911 2A0308 L-type amino 92.6 0.63 1.4E-05 53.4 10.2 86 231-320 165-254 (501)
10 COG0531 PotE Amino acid transp 90.2 8.9 0.00019 42.7 15.9 179 230-412 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 88.7 14 0.0003 41.4 15.9 169 231-412 133-316 (429)
12 PRK10655 potE putrescine trans 85.6 15 0.00032 41.5 14.1 95 232-335 124-225 (438)
13 TIGR03813 put_Glu_GABA_T putat 83.9 27 0.00059 40.0 15.3 55 302-356 195-251 (474)
14 TIGR00907 2A0304 amino acid pe 82.6 17 0.00036 41.6 13.0 26 512-537 454-479 (482)
15 PF13520 AA_permease_2: Amino 79.1 15 0.00032 40.9 10.8 247 206-468 90-366 (426)
16 PRK15049 L-asparagine permease 77.2 44 0.00096 38.9 14.3 23 233-255 146-168 (499)
17 TIGR00930 2a30 K-Cl cotranspor 74.8 56 0.0012 41.6 15.1 25 231-255 203-227 (953)
18 TIGR00906 2A0303 cationic amin 74.2 1.4E+02 0.0029 35.6 17.4 45 231-275 161-208 (557)
19 PRK10435 cadB lysine/cadaverin 73.8 84 0.0018 35.7 15.1 23 234-256 124-146 (435)
20 PRK10746 putative transport pr 71.4 1.1E+02 0.0024 35.2 15.5 29 55-89 12-40 (461)
21 TIGR03810 arg_ornith_anti argi 67.8 2.3E+02 0.005 32.5 17.2 45 369-413 273-317 (468)
22 PRK10249 phenylalanine transpo 65.7 1.3E+02 0.0028 34.6 14.5 103 234-338 138-248 (458)
23 TIGR00908 2A0305 ethanolamine 64.2 1.3E+02 0.0029 34.0 14.1 24 233-256 123-146 (442)
24 PRK11021 putative transporter; 56.5 3.3E+02 0.0072 30.5 16.3 99 231-339 115-217 (410)
25 TIGR03428 ureacarb_perm permea 55.5 3.6E+02 0.0078 31.1 15.8 25 231-255 144-168 (475)
26 PRK11387 S-methylmethionine tr 54.6 2.1E+02 0.0046 32.8 13.7 34 304-337 209-244 (471)
27 PRK11357 frlA putative fructos 54.0 83 0.0018 35.7 10.2 100 232-338 128-234 (445)
28 PF14362 DUF4407: Domain of un 53.5 1.5E+02 0.0032 32.3 11.6 52 454-505 16-71 (301)
29 PRK10644 arginine:agmatin anti 52.3 1.2E+02 0.0027 34.4 11.3 23 233-255 127-149 (445)
30 TIGR00910 2A0307_GadC glutamat 50.0 3.5E+02 0.0077 31.7 14.8 57 303-359 196-254 (507)
31 TIGR00905 2A0302 transporter, 47.1 5E+02 0.011 29.9 15.3 24 232-255 130-153 (473)
32 PF06570 DUF1129: Protein of u 46.9 77 0.0017 32.8 7.9 21 511-531 179-199 (206)
33 PRK10580 proY putative proline 44.6 3E+02 0.0066 31.4 12.9 99 235-337 127-237 (457)
34 PRK10238 aromatic amino acid t 44.3 3.7E+02 0.008 30.8 13.6 113 234-350 129-250 (456)
35 PRK11049 D-alanine/D-serine/gl 44.2 5.5E+02 0.012 29.5 15.6 108 304-412 214-332 (469)
36 TIGR00913 2A0310 amino acid pe 38.9 2.4E+02 0.0053 32.2 11.0 33 306-338 202-236 (478)
37 COG4059 MtrE Tetrahydromethano 37.7 32 0.00069 36.8 3.4 31 507-537 257-287 (304)
38 PF00324 AA_permease: Amino ac 36.3 31 0.00067 39.4 3.4 36 303-338 202-239 (478)
39 KOG3643 GABA receptor [Signal 34.3 35 0.00077 39.6 3.3 91 405-499 224-324 (459)
40 PF05297 Herpes_LMP1: Herpesvi 32.0 15 0.00033 40.5 0.0 60 475-537 126-190 (381)
41 KOG3145 Cystine transporter Cy 30.8 26 0.00056 39.0 1.5 85 232-332 234-339 (372)
42 PHA02749 hypothetical protein; 28.3 79 0.0017 34.0 4.4 146 267-438 128-279 (322)
43 PRK11492 hyfE hydrogenase 4 me 23.1 9.2E+02 0.02 25.6 11.7 133 407-553 77-214 (216)
44 PF13937 DUF4212: Domain of un 23.1 4.6E+02 0.0099 24.0 7.7 18 499-517 30-47 (81)
45 cd05900 Ig_Aggrecan Immunoglob 21.7 1E+02 0.0023 29.0 3.6 29 611-639 74-102 (112)
46 KOG4742 Predicted chitinase [G 21.6 40 0.00087 37.2 0.9 35 323-363 171-207 (286)
47 PRK13108 prolipoprotein diacyl 20.8 3.7E+02 0.0081 31.8 8.5 19 453-471 23-41 (460)
48 TIGR01940 nqrE NADH:ubiquinone 20.4 3.1E+02 0.0067 29.0 7.0 47 432-478 14-62 (200)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=7.1e-258 Score=2177.20 Aligned_cols=758 Identities=46% Similarity=0.841 Sum_probs=705.4
Q ss_pred cccccccccccCCCCccccccccccCCCCCCcccccHHHHHHHHhhhcceeecccCcchhHHHhhhcCC-CCCCcCceeh
Q 004023 21 LQGKKLSWQKLGRNDSLDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTN-GINHIDDILG 99 (778)
Q Consensus 21 ~~~~~~~~~~~~~~ds~~~~~~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~f~~-~~~~~~dvlG 99 (778)
...++++|+.++|+||||.|+++++++++|+.|+.++|+++.|||||||||||||||||||||+++|++ +++++|||+|
T Consensus 63 ~~~~~~~~~~~~~~d~~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlG 142 (852)
T PLN00151 63 GNMRRRLIRTPPRVDSFDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLG 142 (852)
T ss_pred cchhhhHhhCCCccchhhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheee
Confidence 345788999999999999999999888877655577888899999999999999999999999999987 4569999999
Q ss_pred hhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHHHHhhhcccCCCCCCCccccccccccccCchhhhhhhhHHHHhh
Q 004023 100 VLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKL 179 (778)
Q Consensus 100 vLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALysLi~r~~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~l 179 (778)
+||||||||||||++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+++.|+++.+|+.|+|++|
T Consensus 143 vLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~l 222 (852)
T PLN00151 143 ALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERL 222 (852)
T ss_pred ehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhhcccccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhh
Q 004023 180 ENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAP 259 (778)
Q Consensus 180 e~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~P 259 (778)
|+|+++|.++++++++||||+||||+|||||||||||||||++.|++++++||+|||+||++||++|||||+|||++|||
T Consensus 223 E~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgP 302 (852)
T PLN00151 223 ETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGP 302 (852)
T ss_pred hhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhh
Q 004023 260 IICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTV 339 (778)
Q Consensus 260 ImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~ 339 (778)
||++||++||++|+|||++|||+||+||||+|+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++
T Consensus 303 ImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~ 382 (852)
T PLN00151 303 ALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCL 382 (852)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchhhhccCCccccccccccccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecC
Q 004023 340 TYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTS 419 (778)
Q Consensus 340 v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS 419 (778)
|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||
T Consensus 383 V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS 462 (852)
T PLN00151 383 VLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTS 462 (852)
T ss_pred HHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 004023 420 AKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELG 499 (778)
Q Consensus 420 ~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~ 499 (778)
++++||||||+|||+||++|++||++||||++||||||+||++||++||+|+++||+++||||++++++|+++|+++|++
T Consensus 463 ~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~ 542 (852)
T PLN00151 463 RKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELV 542 (852)
T ss_pred CccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcchh
Q 004023 500 YLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPI 579 (778)
Q Consensus 500 f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~ 579 (778)
|||||+.||+||||+||++|++++++|++||||++++|++|.+|++|++++.++.++.+++||||+|+|||++++|+|++
T Consensus 543 f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~ 622 (852)
T PLN00151 543 FFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAI 622 (852)
T ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred hHHhhhhccccceeEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-ChhhHHHHHHHHHHHHHHh
Q 004023 580 FKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARN-EEEPFERMLIEKLEEFIKE 658 (778)
Q Consensus 580 f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v~~~~~~~yRcv~RYGY~D~~~-~~~~Fe~~l~~~l~~fi~~ 658 (778)
|.||++|+|++||++||||||++|+|+||++|||+++|++||++++|||++||||||.++ +++|||+.|+|+|++|||.
T Consensus 623 f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~ 702 (852)
T PLN00151 623 FGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRR 702 (852)
T ss_pred HHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999987 7899999999999999999
Q ss_pred hhhcccccccccccc-ccC--cccc---cccC---C---------ccccccch----------hhh-h-hhhhhhHHHHH
Q 004023 659 DLWLCQTTISNMEIA-EGD--QVDE---LVDG---E---------TDQLDENS----------KLA-Q-QENQKKAELEK 708 (778)
Q Consensus 659 e~~~~~~~~~~~~~~-~~~--~~~~---~~~~---~---------~~~~~~~~----------~~~-~-~~~~~~~~~~~ 708 (778)
|+.....+.+.+.+. ++. .... .+.. . .++..+.. +.+ + ...+.+++++|
T Consensus 703 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (852)
T PLN00151 703 EAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEY 782 (852)
T ss_pred hhhhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccccccCccHHH
Confidence 863211000000000 000 0000 0000 0 00000000 000 0 11122467899
Q ss_pred HHHHHHHHHhcCcEEEeecceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023 709 QIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778 (778)
Q Consensus 709 e~~~l~~a~~~gVvYiLG~~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei 778 (778)
|+++|++|+|+||+|++||++|+||++|+|+||+++||+|+|||||||++.+.|+|||+|++||||+|+|
T Consensus 783 El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 783 ELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=2.8e-251 Score=2123.45 Aligned_cols=752 Identities=47% Similarity=0.870 Sum_probs=695.5
Q ss_pred cccccccccccCCCCc-cccccccccCCCCCCcccccHHHHHHHHhhhcceeecccCcchhHHHhhhcCC-CCCCcCcee
Q 004023 21 LQGKKLSWQKLGRNDS-LDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTN-GINHIDDIL 98 (778)
Q Consensus 21 ~~~~~~~~~~~~~~ds-~~~~~~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~f~~-~~~~~~dvl 98 (778)
.+.++++++..+|.|+ +|+|++++.++++. ++.+|+.++.|||||||||||||||||||||+++|++ +.+++|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~il 85 (779)
T PLN00150 8 ESNQGRLWDLDQRITRPLGVDADSVRSMYFS--SPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDII 85 (779)
T ss_pred CCCccchhhCCCCCCCccCcchhhccccccc--ccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhH
Confidence 3457788999999999 99999999998663 3489999999999999999999999999999999976 567999999
Q ss_pred hhhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHHHHhhhcccCCCCCCCccccccccccccCchhhhhhhhHHHHh
Q 004023 99 GVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYK 178 (778)
Q Consensus 99 GvLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALysLi~r~~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~ 178 (778)
|+||||||||||||++|||+|||||||||||||||||||+|||+|++++|||+++|+++++|+++ +..|..++|++
T Consensus 86 GvLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~----~~~r~~~~k~~ 161 (779)
T PLN00150 86 GALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD----NMNRKTRIQRK 161 (779)
T ss_pred hHHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc----cchhhhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999863 34455679999
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhhcccccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchh
Q 004023 179 LENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFA 258 (778)
Q Consensus 179 le~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~ 258 (778)
||+|+..|+++++++++|+||+||||+|||||||||||||||+..|++++++||+|||+||++||++|||||+|||++||
T Consensus 162 lE~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~Fg 241 (779)
T PLN00150 162 LENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFA 241 (779)
T ss_pred hhcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhh
Q 004023 259 PIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCT 338 (778)
Q Consensus 259 PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~ 338 (778)
|||++||++||++|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||++
T Consensus 242 PIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~ 321 (779)
T PLN00150 242 PIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTS 321 (779)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhccchhhhccCCccccccccccccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEec
Q 004023 339 VTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHT 418 (778)
Q Consensus 339 ~v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHT 418 (778)
+|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+||
T Consensus 322 ~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hT 401 (779)
T PLN00150 322 LVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHT 401 (779)
T ss_pred hHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004023 419 SAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVEL 498 (778)
Q Consensus 419 S~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~ 498 (778)
|++++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|+
T Consensus 402 S~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~ 481 (779)
T PLN00150 402 SNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEG 481 (779)
T ss_pred CcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcch
Q 004023 499 GYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPP 578 (778)
Q Consensus 499 ~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~ 578 (778)
+|||||+.||+||||+||++|++++++|++||||++++|++|.+|++|++++.++.++.++.||||+|+|||++++|+|+
T Consensus 482 ~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~ 561 (779)
T PLN00150 482 IYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPP 561 (779)
T ss_pred HHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999998888888889999999999999999999
Q ss_pred hhHHhhhhccccceeEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEeecccCCCChhhHHHHHHHHHHHHHHh
Q 004023 579 IFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKE 658 (778)
Q Consensus 579 ~f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v~~~~~~~yRcv~RYGY~D~~~~~~~Fe~~l~~~l~~fi~~ 658 (778)
+|.||++|||++||++||+|||++|+|+||++||++++++++++|++|||++||||||.+++++|||+.|+|+|++|||+
T Consensus 562 ~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~ 641 (779)
T PLN00150 562 LFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEI 641 (779)
T ss_pred HHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccccc-ccccCcc-ccccc--C----C-c------ccc-ccchhhh-h-hhhhhhHHHHHHHHHHHHHHhcC
Q 004023 659 DLWLCQTTISNME-IAEGDQV-DELVD--G----E-T------DQL-DENSKLA-Q-QENQKKAELEKQIETLDRAWRAG 720 (778)
Q Consensus 659 e~~~~~~~~~~~~-~~~~~~~-~~~~~--~----~-~------~~~-~~~~~~~-~-~~~~~~~~~~~e~~~l~~a~~~g 720 (778)
|+.....+++..+ +.++... .+.+. . + + ++. +...+.+ + ...+.+++++||+++|++|+|+|
T Consensus 642 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaG 721 (779)
T PLN00150 642 ESFREQSDLESMAASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVSGHSSDTQDEVAFLNKCKEAG 721 (779)
T ss_pred hhhcccccccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcC
Confidence 8632110000000 0000000 00000 0 0 0 000 0000000 0 01122467899999999999999
Q ss_pred cEEEeecceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023 721 VVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778 (778)
Q Consensus 721 VvYiLG~~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei 778 (778)
|+|++||++|+||++|+|+||+++||+|+|||||||++.+.|+|||+|++||||+|||
T Consensus 722 VvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 722 VVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred cEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999996
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=6.1e-249 Score=2105.36 Aligned_cols=723 Identities=45% Similarity=0.820 Sum_probs=669.9
Q ss_pred ccHHH---HHHHHhhhcceeecccCcchhHHHhhhcCCCC---CCcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCC
Q 004023 55 VKWSV---ILQLAFQSIGVVYGDIGTSPLYVYASTFTNGI---NHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGD 128 (778)
Q Consensus 55 ~~~~~---~l~La~qslGVVyGDIGTSPLYv~~~~f~~~~---~~~~dvlGvLSLI~wtL~li~~iKYv~ivl~Add~GE 128 (778)
.+|+. ++.|||||||||||||||||||||+++|+++. +++|||+|+||||||||||||++|||+||||||||||
T Consensus 16 ~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~GE 95 (785)
T PLN00148 16 LSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGE 95 (785)
T ss_pred chhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCCC
Confidence 57777 89999999999999999999999999997532 5899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhhcccCCCCCCCccccccccccccCchhhhhhhhHHHHhhhhhhhHHHHHHHHHHHhhhhhhcCccccc
Q 004023 129 GGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTP 208 (778)
Q Consensus 129 GGtfALysLi~r~~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~~~~~~~~l~~l~l~G~am~igDGvlTP 208 (778)
|||||||||+|||+|++++||||++|+++++|+.+.++.+ +++.++|++||+|+++|.+++++|++|+||+||||+|||
T Consensus 96 GG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTP 174 (785)
T PLN00148 96 GGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTP 174 (785)
T ss_pred chHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccch
Confidence 9999999999999999999999999999999988666444 567789999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecC
Q 004023 209 CISVLSAVGGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAIN 288 (778)
Q Consensus 209 AISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~n 288 (778)
||||||||||||++.|++++++||+|||+||++||++|||||+|||++|||||++||++||++|+|||++|||+||+|||
T Consensus 175 AISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~Aln 254 (785)
T PLN00148 175 AISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALS 254 (785)
T ss_pred hHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhccchhhhccCCccccccccc
Q 004023 289 PKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYK 368 (778)
Q Consensus 289 P~y~~~ff~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~ 368 (778)
|+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+
T Consensus 255 P~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~ 334 (785)
T PLN00148 255 PYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYD 334 (785)
T ss_pred HHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCccCCceeechhHHHHHHHhheeEEeecC
Q 004023 369 SIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRT 448 (778)
Q Consensus 369 siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~ 448 (778)
++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD 414 (785)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHHHHH
Q 004023 449 TEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYI 528 (778)
Q Consensus 449 s~~l~~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~ 528 (778)
|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 494 (785)
T PLN00148 415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI 494 (785)
T ss_pred chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcchhhHHhhhhccccceeEEEEEEEEeeecccC
Q 004023 529 WNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVP 608 (778)
Q Consensus 529 W~~G~~~~~~~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~ 608 (778)
||||++++|++|.+|++|++++.++.++.+++||||+|+|||++++|+|++|.||++|||++||++||||||++|+|+||
T Consensus 495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~ 574 (785)
T PLN00148 495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVS 574 (785)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999988888889999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCCCEEEEEEEeecccCCCChhhHHHHHHHHHHHHHHhhhhccccc--ccccccc-ccCcc--c---c
Q 004023 609 AEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTT--ISNMEIA-EGDQV--D---E 680 (778)
Q Consensus 609 ~~ERflv~~v~~~~~~~yRcv~RYGY~D~~~~~~~Fe~~l~~~l~~fi~~e~~~~~~~--~~~~~~~-~~~~~--~---~ 680 (778)
++||++++|+++++|++|||++||||||.+++++|||++|+|+|++|||+|+.....+ ++++.++ .+... . .
T Consensus 575 ~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (785)
T PLN00148 575 PEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSS 654 (785)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999987321000 0000000 00000 0 0
Q ss_pred -c----cc-------C-Cc---------cccccc-hhh----hh------hhhhhhHHHHHHHHHHHHHHhcCcEEEeec
Q 004023 681 -L----VD-------G-ET---------DQLDEN-SKL----AQ------QENQKKAELEKQIETLDRAWRAGVVHLIGE 727 (778)
Q Consensus 681 -~----~~-------~-~~---------~~~~~~-~~~----~~------~~~~~~~~~~~e~~~l~~a~~~gVvYiLG~ 727 (778)
. +. . ++ ++..+. .+. .+ .+.+.+++++||+++|++|+|+||+|++||
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~ 734 (785)
T PLN00148 655 SLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGH 734 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEecc
Confidence 0 00 0 00 000000 000 00 111234678999999999999999999999
Q ss_pred ceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023 728 SEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778 (778)
Q Consensus 728 ~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei 778 (778)
++|+||++|+|+||+++||+|+|||||||++.+.|+|||+|++||||+|+|
T Consensus 735 s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 735 SYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred ceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999999996
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.4e-248 Score=2104.57 Aligned_cols=738 Identities=42% Similarity=0.789 Sum_probs=672.3
Q ss_pred cccccccccCCCCCCcccccHHHHHHHHhhhcceeecccCcchhHHHhhhcCCC---CCCcCceehhhHHHHHHHHHHhh
Q 004023 37 LDMESRTVSGHYGRDSKAVKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTNG---INHIDDILGVLSLIFYTLTLIPL 113 (778)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~f~~~---~~~~~dvlGvLSLI~wtL~li~~ 113 (778)
||.|.+.+.+ |.++ .+|+.++.|||||||||||||||||||||+++|+++ .+++|||+|+||||||||||||+
T Consensus 1 ~~~~~~~~~~---~~~~-~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~ 76 (779)
T PLN00149 1 MDLEGGSPQN---HVKK-ESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPL 76 (779)
T ss_pred CCcccCcccc---cccc-ccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHh
Confidence 3555554332 2233 799999999999999999999999999999999663 25899999999999999999999
Q ss_pred hheeeEEEEecCCCCChHHHHHHHHhhhcccCCCCCCCccccccccccccCchh---hhhhhhHHHHhhhhhhhHHHHHH
Q 004023 114 VKYVLIVLRANDNGDGGTFALYSLICRYAKVGLIPSEQAEDCDVSNFQLELPSK---RLKRASRLKYKLENSQFAKYFLL 190 (778)
Q Consensus 114 iKYv~ivl~Add~GEGGtfALysLi~r~~k~~~~pn~~~~d~~~s~~~~~~~~~---~~~~~~~~k~~le~~~~~~~~l~ 190 (778)
+|||+|||||||||||||||||||+|||+|++++||||++|+++++|+++.++. +.+++.++|++||+|+.+|++++
T Consensus 77 iKYv~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll 156 (779)
T PLN00149 77 LKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLL 156 (779)
T ss_pred hhhEEEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999998877543 34556889999999999999999
Q ss_pred HHHHHhhhhhhcCccccchhhhhhhhcccccccCCCCCCee-ehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHH
Q 004023 191 VATMLGTSMVIGDGVLTPCISVLSAVGGIKEASAGMTQDKV-VWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIG 269 (778)
Q Consensus 191 ~l~l~G~am~igDGvlTPAISVLSAVeGl~v~~p~l~~~~V-v~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~ 269 (778)
+++++|+||+||||+|||||||||||||||++.|...++++ |+|||+||++||++|||||+|||++|||||++||++||
T Consensus 157 ~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~ 236 (779)
T PLN00149 157 VLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCIS 236 (779)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999976545455 99999999999999999999999999999999999999
Q ss_pred hhhhhhccccCcceeeecChHHHHHHHhhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhc
Q 004023 270 GIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYM 349 (778)
Q Consensus 270 ~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~ 349 (778)
++|+|||++|||+||+||||+|+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+
T Consensus 237 ~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~ 316 (779)
T PLN00149 237 AIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYM 316 (779)
T ss_pred HHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhccCCc---cccccccccccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCccCCce
Q 004023 350 GQASFLRKHSE---LVSETFYKSIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQV 426 (778)
Q Consensus 350 GQaA~L~~~p~---~~~n~Fy~siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~~~GQI 426 (778)
||||||++||+ +++||||+++|+|+|||+|++||+||||||||||||+||+++||++||||||+||+|||++++|||
T Consensus 317 GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQI 396 (779)
T PLN00149 317 GQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQI 396 (779)
T ss_pred hHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCce
Confidence 99999999996 566799999999999999999999999999999999999999999999999999999999999999
Q ss_pred eechhHHHHHHHhheeEEeecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 004023 427 YIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLY 506 (778)
Q Consensus 427 YIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~ 506 (778)
|||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+|||+++++++|+++|+++|++|||||+.
T Consensus 397 YIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~ 476 (779)
T PLN00149 397 YIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLI 476 (779)
T ss_pred eeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcchhhHHhhhh
Q 004023 507 KFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVEN 586 (778)
Q Consensus 507 K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~f~h~l~~ 586 (778)
||+||||+||++|++++++|++||||++++|++|.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|
T Consensus 477 Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~ 556 (779)
T PLN00149 477 KFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTN 556 (779)
T ss_pred hhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred ccccceeEEEEEEEEeeecccCCCceEEEEEecCCCCCEEEEEEEeecccCCCChhhHHHHHHHHHHHHHHhhhhccccc
Q 004023 587 VPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTT 666 (778)
Q Consensus 587 ~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v~~~~~~~yRcv~RYGY~D~~~~~~~Fe~~l~~~l~~fi~~e~~~~~~~ 666 (778)
+|++||++||||||++|+|+||++|||+++|++++++++|||++||||||.+++++|||++|+|+|++|||+|+.....+
T Consensus 557 ~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~ 636 (779)
T PLN00149 557 LPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGA 636 (779)
T ss_pred CCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986321100
Q ss_pred ccccccccc---C-----cccc------ccc--CCcc---cc-----cc-chhhh------hhhhhhhHHHHHHHHHHHH
Q 004023 667 ISNMEIAEG---D-----QVDE------LVD--GETD---QL-----DE-NSKLA------QQENQKKAELEKQIETLDR 715 (778)
Q Consensus 667 ~~~~~~~~~---~-----~~~~------~~~--~~~~---~~-----~~-~~~~~------~~~~~~~~~~~~e~~~l~~ 715 (778)
.+...+.+. . ..+. .+. .++. +. .+ ..+.. ..+.+.+++++||+++|++
T Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~ 716 (779)
T PLN00149 637 PENEEGEDERMTVVGTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELME 716 (779)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCccccCcccceeeccccccccchhHHHHHHHHHH
Confidence 000000000 0 0000 000 0000 00 00 00000 0112235678999999999
Q ss_pred HHhcCcEEEeecceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023 716 AWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778 (778)
Q Consensus 716 a~~~gVvYiLG~~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei 778 (778)
|+|+||+|++||++|+||++|+|+||+++||+|+|||||||++.+.|+|||+|++||||+||+
T Consensus 717 A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 717 AREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999996
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=7.4e-230 Score=1938.90 Aligned_cols=686 Identities=46% Similarity=0.818 Sum_probs=651.8
Q ss_pred HHhhhcceeecccCcchhHHHhhhcCCCCCCcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHHHHhhhc
Q 004023 63 LAFQSIGVVYGDIGTSPLYVYASTFTNGINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRYA 142 (778)
Q Consensus 63 La~qslGVVyGDIGTSPLYv~~~~f~~~~~~~~dvlGvLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALysLi~r~~ 142 (778)
|||||||||||||||||||||+++|.++.+++|||+|+||||||||||++++|||++||||||||||||||||||+||++
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~~ 80 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRYA 80 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhc
Confidence 58999999999999999999999997666799999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccccccccCchhhhhhhhHHHHhhhhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhhcccccc
Q 004023 143 KVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKEA 222 (778)
Q Consensus 143 k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAVeGl~v~ 222 (778)
|++.+||||++|+++++|+.+.+++ .+|..++|+++|++++.|++++++|++|+||++|||+|||||||||||||||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~ 159 (688)
T TIGR00794 81 KISARPVHQELDRAESSYSTKSPNL-LNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIV 159 (688)
T ss_pred cccCCCcccchhhhhhhcccccccc-cchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhcccccc
Confidence 9999999999999999999988865 577788999999998889999999999999999999999999999999999999
Q ss_pred cCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChh
Q 004023 223 SAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKD 302 (778)
Q Consensus 223 ~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~ 302 (778)
.|++++++||||||+||++||++|||||+|||++|||||++||++||++|+|||++|||+||+|+||+|+++||.+||+.
T Consensus 160 ~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~ 239 (688)
T TIGR00794 160 APSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTV 239 (688)
T ss_pred CCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCc
Confidence 99998899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhccchhhhccCCccccccccccccccchHHHHHHH
Q 004023 303 AWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIVA 382 (778)
Q Consensus 303 ~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~wP~~vlA 382 (778)
||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++|||+++|
T Consensus 240 ~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlA 319 (688)
T TIGR00794 240 GWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIA 319 (688)
T ss_pred eeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhHH
Q 004023 383 VMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVF 462 (778)
Q Consensus 383 tlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~ 462 (778)
|+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++
T Consensus 320 tlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~ 399 (688)
T TIGR00794 320 TLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTG 399 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 004023 463 VMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFELE 542 (778)
Q Consensus 463 vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~ 542 (778)
||+|||+|+++||+.+|||+++++++|+++|+.+|+.|||||+.||+||||+||++|++++++|++|+||++++++++.+
T Consensus 400 tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~ 479 (688)
T TIGR00794 400 TFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHE 479 (688)
T ss_pred hhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHhh-ccCCccccceEEEEecCCCCcchhhHHhhhhccccceeEEEEEEEEeeecccCCCceEEEEEecCC
Q 004023 543 HKISPERVKEIAA-ETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPR 621 (778)
Q Consensus 543 ~~v~~~~~~~~~~-~~~~~RvpGiglf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v~~~ 621 (778)
+++|++++++.+. +.+++|+||+|+|||++++++|++|.||++|||++||++||+|||++|+|+||++||+++++++++
T Consensus 480 ~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~ 559 (688)
T TIGR00794 480 HRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPT 559 (688)
T ss_pred cCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCC
Confidence 9999999988554 444589999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCCEEEEEEEeecccCCCChhhHHHHHHHHHHHHHHhhhhccccccccccccccCcccccccCCccccccchhhhhhhhh
Q 004023 622 ELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKLAQQENQ 701 (778)
Q Consensus 622 ~~~~yRcv~RYGY~D~~~~~~~Fe~~l~~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (778)
+ |+|||++||||||++|+|++||++++|+|++|++++......++++ .++ .+
T Consensus 560 ~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~~~~~~-~~~--------------------------~~ 611 (688)
T TIGR00794 560 E-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNLNNLEE-LSD--------------------------KR 611 (688)
T ss_pred C-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhccccccc-ccc--------------------------cc
Confidence 4 9999999999999999999999999999999999864211000000 000 00
Q ss_pred hhHHHHHHHHHHHHHHhcCcEEEeecceEEeCCCCCccHHHHH-HHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023 702 KKAELEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILI-DYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778 (778)
Q Consensus 702 ~~~~~~~e~~~l~~a~~~gVvYiLG~~~V~A~~~Ss~~Kki~i-n~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei 778 (778)
.+...|||++.++++.|+|++|++||++++++++++++|| |+ +++|+||+||||+++++|+||+||++||||+|||
T Consensus 612 ~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~-~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 612 CRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRK-IRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred cccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHH-HHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 0113689999999999999999999999999999997688 66 9999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=6.9e-211 Score=1760.71 Aligned_cols=609 Identities=34% Similarity=0.602 Sum_probs=583.2
Q ss_pred HHHhhhcceeecccCcchhHHHhhhcCC--CC-CCcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHHHH
Q 004023 62 QLAFQSIGVVYGDIGTSPLYVYASTFTN--GI-NHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLI 138 (778)
Q Consensus 62 ~La~qslGVVyGDIGTSPLYv~~~~f~~--~~-~~~~dvlGvLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALysLi 138 (778)
.|+++|||||||||||||||+|+++|.+ ++ +++|||+|+||||||||||++++|||++||||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 3789999999999999999999999965 33 48999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCccccccccccccCchhhhhhhhHHHHhhhhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhhcc
Q 004023 139 CRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGG 218 (778)
Q Consensus 139 ~r~~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAVeG 218 (778)
+|+.+ ++.|.+++++|++|+||++|||+|||||||||||||
T Consensus 91 ~~~~~---------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEG 131 (622)
T PRK10745 91 GRNTS---------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEG 131 (622)
T ss_pred hhhcc---------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhc
Confidence 87543 133557889999999999999999999999999999
Q ss_pred cccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhh
Q 004023 219 IKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTR 298 (778)
Q Consensus 219 l~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~ 298 (778)
||+..|++ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+ ||+||+|+||+|+++||.+
T Consensus 132 L~v~~p~l-~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~ 209 (622)
T PRK10745 132 LEIVAPQL-DTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLE 209 (622)
T ss_pred ccccCCCC-CCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHh
Confidence 99999999 669999999999999999999999999999999999999999999999997 7999999999999999999
Q ss_pred cChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhccchhhhccCCccccccccccccccchHHH
Q 004023 299 NKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPM 378 (778)
Q Consensus 299 ~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~wP~ 378 (778)
||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||+
T Consensus 210 ~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~ 289 (622)
T PRK10745 210 YKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPL 289 (622)
T ss_pred CCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhh
Q 004023 379 FIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGI 458 (778)
Q Consensus 379 ~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGi 458 (778)
+++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+
T Consensus 290 viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGi 369 (622)
T PRK10745 290 LILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGI 369 (622)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004023 459 AVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYY 538 (778)
Q Consensus 459 aV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~ 538 (778)
||++||++||+|++++++.+|||+++++++|+++|+.+|+.||+||+.|++||||+|+++|++++++|++|++|++++++
T Consensus 370 AVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~ 449 (622)
T PRK10745 370 AVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLR 449 (622)
T ss_pred hheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcchhhHHhhhhccccceeEEEEEEEEeeecccCCCceEEEEEe
Q 004023 539 FELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRV 618 (778)
Q Consensus 539 ~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v 618 (778)
++.+++++++++++.+++.++.|+||+|+|||+..+++|+++.|+++|||++||++||+|||++|+|+||++||++++++
T Consensus 450 ~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l 529 (622)
T PRK10745 450 RMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQL 529 (622)
T ss_pred HHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEE
Confidence 99999999999999988777779999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCEEEEEEEeecccCCCChhhHHHHHHHHHHHHHHhhhhccccccccccccccCcccccccCCccccccchhhhhh
Q 004023 619 EPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKLAQQ 698 (778)
Q Consensus 619 ~~~~~~~yRcv~RYGY~D~~~~~~~Fe~~l~~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (778)
++ |+|||++||||||++|.++.++++ +.++ .+. |.
T Consensus 530 ~~---g~~rv~~~yGf~e~~~i~~~L~~~---------~~~g-~~~-------~~------------------------- 564 (622)
T PRK10745 530 SP---TFWRVVASYGWRETPNVEEVFHRC---------GLEG-LSC-------RM------------------------- 564 (622)
T ss_pred CC---CEEEEEEEecCCCCCCHHHHHHHH---------HhCC-CCC-------Cc-------------------------
Confidence 97 899999999999999999999876 3321 110 11
Q ss_pred hhhhhHHHHHHHHHHHHHHhcCcEEEeecceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEEEC
Q 004023 699 ENQKKAELEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTYEL 778 (778)
Q Consensus 699 ~~~~~~~~~~e~~~l~~a~~~gVvYiLG~~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~yei 778 (778)
++++|++||+++++++++++ .+ |++++|+||.||+++++++|++|+||++|+|+++|+
T Consensus 565 --------------------~~~s~fl~r~~l~~~~~~~m-~~-wr~~lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 565 --------------------METSFFMSHESLILGKRPWY-LR-LRGKLFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred --------------------cceEEEEeeEEEEeCCCCCc-HH-HHHHHHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 57999999999999988887 64 999999999999999999999999999999999986
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=2.3e-196 Score=1631.01 Aligned_cols=532 Identities=47% Similarity=0.845 Sum_probs=518.6
Q ss_pred HhhhcceeecccCcchhHHHhhhcCC--CCCCcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHHHHhhh
Q 004023 64 AFQSIGVVYGDIGTSPLYVYASTFTN--GINHIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYSLICRY 141 (778)
Q Consensus 64 a~qslGVVyGDIGTSPLYv~~~~f~~--~~~~~~dvlGvLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALysLi~r~ 141 (778)
|++|||||||||||||||+|+++|.+ ..+++|||+|+||||||||||++++|||++||||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 68999999999999999999999932 3469999999999999999999999999999999999999999999999853
Q ss_pred cccCCCCCCCccccccccccccCchhhhhhhhHHHHhhhhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhhccccc
Q 004023 142 AKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAVGGIKE 221 (778)
Q Consensus 142 ~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAVeGl~v 221 (778)
.+ ++++.|..++++|++|+||++|||+||||||||||||||++
T Consensus 81 ~~-------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v 123 (534)
T PF02705_consen 81 LK-------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEV 123 (534)
T ss_pred hc-------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhc
Confidence 32 34466777899999999999999999999999999999999
Q ss_pred ccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcCh
Q 004023 222 ASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKK 301 (778)
Q Consensus 222 ~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~ 301 (778)
..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+| |+||+|+||+|+++||.+||+
T Consensus 124 ~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~~-p~Vl~A~nP~yai~f~~~~~~ 201 (534)
T PF02705_consen 124 ATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQH-PEVLKALNPYYAIRFFIRNGW 201 (534)
T ss_pred cCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhC-HHHHHHhCHHHHHHHHHHcCC
Confidence 999995 899999999999999999999999999999999999999999999999995 999999999999999999999
Q ss_pred hHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhccchhhhccCCccccccccccccccchHHHHHH
Q 004023 302 DAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYWPMFIV 381 (778)
Q Consensus 302 ~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~wP~~vl 381 (778)
.||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++
T Consensus 202 ~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~il 281 (534)
T PF02705_consen 202 IGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVIL 281 (534)
T ss_pred chhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhH
Q 004023 382 AVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVV 461 (778)
Q Consensus 382 AtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~ 461 (778)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||+
T Consensus 282 AtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt 361 (534)
T PF02705_consen 282 ATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVT 361 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004023 462 FVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRKYYFEL 541 (778)
Q Consensus 462 ~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~ 541 (778)
+||++||+|++++|+.+|||+++++++|+++|+.+|+.||+||+.||+||||+|+++|++++++|++|+||++++++++.
T Consensus 362 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~ 441 (534)
T PF02705_consen 362 GTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFER 441 (534)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhHHHHHhhccCCccccceEEEEecCCCCcchhhHHhhhhccccceeEEEEEEEEeeecccCCCceEEEEEecCC
Q 004023 542 EHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFRRVEPR 621 (778)
Q Consensus 542 ~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~~v~~~ 621 (778)
++++++++++++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|+++|++|+|+||++||++++++++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~- 520 (534)
T PF02705_consen 442 ENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP- 520 (534)
T ss_pred hcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCEEEEEEEeeccc
Q 004023 622 ELNVFRCVARYGYTD 636 (778)
Q Consensus 622 ~~~~yRcv~RYGY~D 636 (778)
+++|||++||||||
T Consensus 521 -~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 -DGFYRVTLRYGFME 534 (534)
T ss_pred -CCEEEEEEEecCCC
Confidence 49999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-194 Score=1590.22 Aligned_cols=610 Identities=35% Similarity=0.629 Sum_probs=589.1
Q ss_pred HHHHHhhhcceeecccCcchhHHHhhhcCC--CCC-CcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCCChHHHHHH
Q 004023 60 ILQLAFQSIGVVYGDIGTSPLYVYASTFTN--GIN-HIDDILGVLSLIFYTLTLIPLVKYVLIVLRANDNGDGGTFALYS 136 (778)
Q Consensus 60 ~l~La~qslGVVyGDIGTSPLYv~~~~f~~--~~~-~~~dvlGvLSLI~wtL~li~~iKYv~ivl~Add~GEGGtfALys 136 (778)
+..+.+.|+|||||||||||||+++++|.. +.. ++|+|+|++||||||||+|+++|||++||||||||||||++|++
T Consensus 15 ~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~a 94 (627)
T COG3158 15 TKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLMA 94 (627)
T ss_pred chhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHHH
Confidence 567899999999999999999999999976 433 89999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCCCCccccccccccccCchhhhhhhhHHHHhhhhhhhHHHHHHHHHHHhhhhhhcCccccchhhhhhhh
Q 004023 137 LICRYAKVGLIPSEQAEDCDVSNFQLELPSKRLKRASRLKYKLENSQFAKYFLLVATMLGTSMVIGDGVLTPCISVLSAV 216 (778)
Q Consensus 137 Li~r~~k~~~~pn~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~~~~~~~~l~~l~l~G~am~igDGvlTPAISVLSAV 216 (778)
|+.|.++ +...++.++|++|+|+++|||+|||||||||||
T Consensus 95 L~~~~~~----------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAv 134 (627)
T COG3158 95 LARRAAP----------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSAV 134 (627)
T ss_pred HHHhhcC----------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHHh
Confidence 9988765 234578999999999999999999999999999
Q ss_pred cccccccCCCCCCeeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHH
Q 004023 217 GGIKEASAGMTQDKVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYF 296 (778)
Q Consensus 217 eGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff 296 (778)
|||++..|.+ +++|+|||++||++||++||+||++||++|||||++||+++|..|++||.. ||+||+|+||+||++|+
T Consensus 135 EGL~iv~p~~-~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl 212 (627)
T COG3158 135 EGLEIVTPAL-DPYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFL 212 (627)
T ss_pred ccccccCccc-cCccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHH
Confidence 9999999998 589999999999999999999999999999999999999999999999997 89999999999999999
Q ss_pred hhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhccchhhhccCCccccccccccccccchH
Q 004023 297 TRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSELVSETFYKSIPHSLYW 376 (778)
Q Consensus 297 ~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p~~~~n~Fy~siP~~~~w 376 (778)
.++|..|++.||+|+||+||+||||||||||||+|||.||+++|+|||+|||+||||++++|||+..||||.++|+|++|
T Consensus 213 ~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~ali 292 (627)
T COG3158 213 LEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALI 292 (627)
T ss_pred HhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCccCCceeechhHHHHHHHhheeEEeecCcchhhhhh
Q 004023 377 PMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAY 456 (778)
Q Consensus 377 P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AY 456 (778)
||+++||+||||||||+|||+||+++||++||++||+||.|||+++.||||||.|||+|+++++.++++||+|++||+||
T Consensus 293 P~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAY 372 (627)
T COG3158 293 PLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAY 372 (627)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 004023 457 GIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFAAVLMTIMYIWNNVYRRK 536 (778)
Q Consensus 457 GiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~ 536 (778)
|||||++|+|||+|++.+|+..|||+.+++.++.++|+.+|..||+||+.|++||||+|+++|++++++|+||++|+++.
T Consensus 373 GiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l 452 (627)
T COG3158 373 GIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQIL 452 (627)
T ss_pred ChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhHHHHHhhccCCccccceEEEEecCCCCcchhhHHhhhhccccceeEEEEEEEEeeecccCCCceEEEE
Q 004023 537 YYFELEHKISPERVKEIAAETKFCRIPGLAMFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPIGKVPAEERFLFR 616 (778)
Q Consensus 537 ~~~~~~~~v~~~~~~~~~~~~~~~RvpGiglf~t~~~~giP~~f~h~l~~~~~lH~~~Vfv~ik~lpvP~V~~~ERflv~ 616 (778)
+++..++++|++.+++.+++.++.||||+++|+|...+-+|.++.|+++||+.+||++||+++++.++|+|+++||+.++
T Consensus 453 ~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve 532 (627)
T COG3158 453 FEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVE 532 (627)
T ss_pred HHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCEEEEEEEeecccCCCChhhHHHHHHHHHHHHHHhhhhccccccccccccccCcccccccCCccccccchhhh
Q 004023 617 RVEPRELNVFRCVARYGYTDARNEEEPFERMLIEKLEEFIKEDLWLCQTTISNMEIAEGDQVDELVDGETDQLDENSKLA 696 (778)
Q Consensus 617 ~v~~~~~~~yRcv~RYGY~D~~~~~~~Fe~~l~~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (778)
++++ +++|+.++|||||+||+|+.++.| ++++ +.+ |.
T Consensus 533 ~l~~---~f~rV~l~~Gfme~pnvp~~l~~~---------~~~G-~~f-------~i----------------------- 569 (627)
T COG3158 533 QLSD---DFVRVVLHFGFMETPNVPRALRLC---------RKKG-LKF-------DI----------------------- 569 (627)
T ss_pred eccC---ceEEEEEEeeccCCCCHHHHHHHH---------hhcC-cee-------cc-----------------------
Confidence 9998 799999999999999999999988 5443 211 11
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhcCcEEEeecceEEeCCCCCccHHHHHHHHHHHHHHhccCcCcccccCCCCEEEEeeEE
Q 004023 697 QQENQKKAELEKQIETLDRAWRAGVVHLIGESEVVAGKGANIGKRILIDYGYNFLKRNLTQSGKVFDIPHKRMLKVGMTY 776 (778)
Q Consensus 697 ~~~~~~~~~~~~e~~~l~~a~~~gVvYiLG~~~V~A~~~Ss~~Kki~in~lYaFLrrN~R~~~~~l~IP~~rlleVGm~y 776 (778)
+.++|++||+++++++++++ .+ |++.+|..|.||+.+++++|+||++|++|+|.++
T Consensus 570 ----------------------m~tsFfl~re~l~~~~~~g~-~~-w~~~lfi~l~r~aa~~~~~F~lp~~rvvElGtqv 625 (627)
T COG3158 570 ----------------------METSFFLSRESLIASKNSGM-PR-WRDRLFIALARNAASPTDYFKLPPNRVVELGTQV 625 (627)
T ss_pred ----------------------cceEEEEEeeeeecCCCCCc-hH-HHHHHHHHHHHhcCCHHHhhCCCCCcEEEeeeee
Confidence 57999999999999999999 64 9999999999999999999999999999999999
Q ss_pred EC
Q 004023 777 EL 778 (778)
Q Consensus 777 ei 778 (778)
||
T Consensus 626 eI 627 (627)
T COG3158 626 EI 627 (627)
T ss_pred eC
Confidence 86
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.59 E-value=0.63 Score=53.45 Aligned_cols=86 Identities=19% Similarity=0.139 Sum_probs=45.4
Q ss_pred eehhHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChhHHH-h
Q 004023 231 VVWVSVAIIVLLFMVQRFGTDKVGY---SFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWI-S 306 (778)
Q Consensus 231 Vv~is~~ILv~LF~iQ~~GT~kVg~---~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~-~ 306 (778)
...+++++++++..+.-+|....++ .+.-+.++=++.+.+.|++.+.+.++. ..+|...+.-.. ++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGTE-TSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCCC-CcHHHHHHH
Confidence 4567888888899999999766554 333222222233334555544331111 122222111000 2334444 5
Q ss_pred hhhhhhhhcccccc
Q 004023 307 LGGVVLAITGTEAL 320 (778)
Q Consensus 307 LG~v~L~iTG~EAl 320 (778)
+..++.+.+|-|+.
T Consensus 241 ~~~~~~af~G~e~~ 254 (501)
T TIGR00911 241 FYSGIWAYGGWNYL 254 (501)
T ss_pred HHHHHHHHHhHHHH
Confidence 77888899998864
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=90.23 E-value=8.9 Score=42.72 Aligned_cols=179 Identities=15% Similarity=0.083 Sum_probs=99.0
Q ss_pred eeehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChhHHHhhhh
Q 004023 230 KVVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISLGG 309 (778)
Q Consensus 230 ~Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~~LG~ 309 (778)
....++.+++++++.++-+|....++...-..++=++.+..+++..+...+......+++... ..-....-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 467789999999999999999888775555444444444444444444432222222221111 00001134566777
Q ss_pred hhhhhcccccc--ccc-CCCCCccceeeehhhhHHHHHHHhhccchhhhccCCc-ccc-----cccc---cccc-ccchH
Q 004023 310 VVLAITGTEAL--FAD-VGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHSE-LVS-----ETFY---KSIP-HSLYW 376 (778)
Q Consensus 310 v~L~iTG~EAl--fAD-lGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p~-~~~-----n~Fy---~siP-~~~~w 376 (778)
++.+.+|-|+. +|+ +=+ .+|.|-.+-..-..-+.++-.+++-+....-|. +.. +|+. .... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 88999998864 332 333 555666665554444444444444443333332 111 3433 2222 35555
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcc
Q 004023 377 PMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPR 412 (778)
Q Consensus 377 P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPr 412 (778)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 555655555555556666666666667778899999
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=88.71 E-value=14 Score=41.38 Aligned_cols=169 Identities=15% Similarity=0.090 Sum_probs=81.0
Q ss_pred eehhHHHHHHHHHHHhhhcccccc---cchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcChhHH-Hh
Q 004023 231 VVWVSVAIIVLLFMVQRFGTDKVG---YSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNKKDAW-IS 306 (778)
Q Consensus 231 Vv~is~~ILv~LF~iQ~~GT~kVg---~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~-~~ 306 (778)
+..++++++++...+..+|....+ ..+..+.++=++.+.+.|+.+. ++.-+..+.| ++..+| ..
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~~ 200 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMP---------MGFGGVGAA 200 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCC---------CcHHHHHHH
Confidence 334567778888888998976555 4566655554444444555433 2322222222 122232 23
Q ss_pred hhhhhhhhcccccccc--cCCCCCccceeeehhhhHHHHHHHhhccchhhhcc-CC-cc---cccccc----ccccccch
Q 004023 307 LGGVVLAITGTEALFA--DVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRK-HS-EL---VSETFY----KSIPHSLY 375 (778)
Q Consensus 307 LG~v~L~iTG~EAlfA--DlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~-~p-~~---~~n~Fy----~siP~~~~ 375 (778)
+...+.+.+|-|+.-. +-=+-.+|.+..|-..-+.=+ .+.|+.-...... -| ++ ..+|+. +...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~-~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVV-TLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 5556777778886543 333445566776654322222 2223333221111 11 11 112332 22233343
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcc
Q 004023 376 WPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPR 412 (778)
Q Consensus 376 wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPr 412 (778)
+-+.+.+.++..-+..+.+.+.=-++...-+.|.+|+
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 4344444444444444444444344445557899997
No 12
>PRK10655 potE putrescine transporter; Provisional
Probab=85.64 E-value=15 Score=41.45 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=45.6
Q ss_pred ehhHHHHHHHHHHHhhhcccccccc---hhhHHHHHHHHHHhhhhhhccccCcceee-ecChHHHHHHHhhcChhHH-Hh
Q 004023 232 VWVSVAIIVLLFMVQRFGTDKVGYS---FAPIICVWFSLIGGIGIYNFIKYDPSVIK-AINPKYIVDYFTRNKKDAW-IS 306 (778)
Q Consensus 232 v~is~~ILv~LF~iQ~~GT~kVg~~---F~PImllWF~~i~~iGiyni~~~~p~Vl~-A~nP~y~~~ff~~~g~~~~-~~ 306 (778)
..+++++++++..+.-+|+...+++ ..-..++-++.+...|++.. +++-+. .++|.-. .+ ..++ .+
T Consensus 124 ~~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~~---~~~~~~~~~~~~~~-~~-----~~~~~~~ 194 (438)
T PRK10655 124 CLATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFWF---SPSLYVAAWNPHHL-PF-----FSAVGSS 194 (438)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CcccccCCcCccCC-ch-----HHHHHHH
Confidence 3455666777888999997666553 22233333444444554432 233221 1222100 00 0111 22
Q ss_pred hhhhhhhhcccccc--cccCCCCCccceeee
Q 004023 307 LGGVVLAITGTEAL--FADVGHFTVQSIQLS 335 (778)
Q Consensus 307 LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a 335 (778)
+..++.+.+|-|+. +|+=-+-.+|.+-.|
T Consensus 195 ~~~~~~af~G~e~~~~~a~E~k~P~r~iPrA 225 (438)
T PRK10655 195 IAMTLWAFLGLESACANSDAVENPERNVPIA 225 (438)
T ss_pred HHHHHHHHhhhhhhhhhHHHhhCccccccHH
Confidence 44567777887743 333334455555554
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=83.89 E-value=27 Score=39.99 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=29.1
Q ss_pred hHHHhhhhhhhhhccccc--ccccCCCCCccceeeehhhhHHHHHHHhhccchhhhc
Q 004023 302 DAWISLGGVVLAITGTEA--LFADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLR 356 (778)
Q Consensus 302 ~~~~~LG~v~L~iTG~EA--lfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~ 356 (778)
.++...++++.+.+|-|. .+|+==+-.+|.+-.|-..-+.=+.++-.+++-+...
T Consensus 195 ~~~~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~~~~~~ 251 (474)
T TIGR03813 195 DNVVLAASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGTLAIAF 251 (474)
T ss_pred ccHHHHHHHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444556778888874 3444445556666666555443333333333444333
No 14
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=82.62 E-value=17 Score=41.65 Aligned_cols=26 Identities=27% Similarity=0.563 Sum_probs=18.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH
Q 004023 512 GYLPLAFAAVLMTIMYIWNNVYRRKY 537 (778)
Q Consensus 512 GW~pl~ia~v~~~iM~~W~~G~~~~~ 537 (778)
-|.++++++++...+..|....+|.|
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~~ 479 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKEF 479 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceeec
Confidence 49999998888877777765333333
No 15
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=79.13 E-value=15 Score=40.90 Aligned_cols=247 Identities=13% Similarity=0.111 Sum_probs=131.5
Q ss_pred ccchhhhhhhhcccccc-cCCCCCC--eeehhHHHHHHHHHHHhhhcccccccc---hhhHHH-HHHHHHHhhhhhhccc
Q 004023 206 LTPCISVLSAVGGIKEA-SAGMTQD--KVVWVSVAIIVLLFMVQRFGTDKVGYS---FAPIIC-VWFSLIGGIGIYNFIK 278 (778)
Q Consensus 206 lTPAISVLSAVeGl~v~-~p~l~~~--~Vv~is~~ILv~LF~iQ~~GT~kVg~~---F~PIml-lWF~~i~~iGiyni~~ 278 (778)
.+.++...++.+-+... .|++.++ ....+++++++..+.+.-+|....+++ ++=+.+ .-++.+.+.|++...+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~ 169 (426)
T PF13520_consen 90 LSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF 169 (426)
T ss_dssp HHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred ccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc
Confidence 34444444455555432 2333221 345678888888999999998766653 332333 3445556667765543
Q ss_pred cCcce-----eeecChHHHHHHHhhcCh-hHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHHHhhccch
Q 004023 279 YDPSV-----IKAINPKYIVDYFTRNKK-DAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALILAYMGQA 352 (778)
Q Consensus 279 ~~p~V-----l~A~nP~y~~~ff~~~g~-~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQa 352 (778)
+ ..- ....+|. +. .-+..+...+.+.+|-|+.=.-.+-..+|.+..+-..-+.-+.++.-+..-
T Consensus 170 ~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~ 239 (426)
T PF13520_consen 170 S-GFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSI 239 (426)
T ss_dssp C-HHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-ccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhh
Confidence 1 111 1122222 21 136678888999999987654444454566666554433333333333333
Q ss_pred hhhccCCcc----ccc------ccccc-ccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcceeEEecCCc
Q 004023 353 SFLRKHSEL----VSE------TFYKS-IPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRVKVVHTSAK 421 (778)
Q Consensus 353 A~L~~~p~~----~~n------~Fy~s-iP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvHTS~~ 421 (778)
++...-|.+ .+| .+++. -.++..+.+.+.+.++.+-+-.+.+.+.--++.+.-+-|.+|+ +..|++ |
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~-k 317 (426)
T PF13520_consen 240 ALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVN-K 317 (426)
T ss_dssp HHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTS-S
T ss_pred eeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhcc-c
Confidence 333333321 111 22222 2457788888888887777777777676667777888899994 233333 2
Q ss_pred cCCceeechhHHHHHHHhh-eeEE--eec---CcchhhhhhhhhhHHHHHHHH
Q 004023 422 YEGQVYIPEINYLLMIACV-CVTV--GFR---TTEKIGNAYGIAVVFVMTLTS 468 (778)
Q Consensus 422 ~~GQIYIP~vNw~Lmi~~i-~vv~--~F~---~s~~l~~AYGiaV~~vM~iTT 468 (778)
.| .|..-.+++..+. +..+ .|- +.+.+.+.+.+......+++.
T Consensus 318 -~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 318 -FG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp -SS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred -cC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2555444333332 2222 232 234566666666655555553
No 16
>PRK15049 L-asparagine permease; Provisional
Probab=77.18 E-value=44 Score=38.89 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHHhhhccccccc
Q 004023 233 WVSVAIIVLLFMVQRFGTDKVGY 255 (778)
Q Consensus 233 ~is~~ILv~LF~iQ~~GT~kVg~ 255 (778)
.++.++++++..+.-+|....+.
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777888888888766654
No 17
>TIGR00930 2a30 K-Cl cotransporter.
Probab=74.76 E-value=56 Score=41.58 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=18.3
Q ss_pred eehhHHHHHHHHHHHhhhccccccc
Q 004023 231 VVWVSVAIIVLLFMVQRFGTDKVGY 255 (778)
Q Consensus 231 Vv~is~~ILv~LF~iQ~~GT~kVg~ 255 (778)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4557778888888888889854443
No 18
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=74.22 E-value=1.4e+02 Score=35.62 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=26.7
Q ss_pred eehhHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhh
Q 004023 231 VVWVSVAIIVLLFMVQRFGTDKVGY---SFAPIICVWFSLIGGIGIYN 275 (778)
Q Consensus 231 Vv~is~~ILv~LF~iQ~~GT~kVg~---~F~PImllWF~~i~~iGiyn 275 (778)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456777777778888899866664 33333333344444555543
No 19
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=73.83 E-value=84 Score=35.68 Aligned_cols=23 Identities=22% Similarity=0.287 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHHhhhcccccccc
Q 004023 234 VSVAIIVLLFMVQRFGTDKVGYS 256 (778)
Q Consensus 234 is~~ILv~LF~iQ~~GT~kVg~~ 256 (778)
++++++.++..+..+|+...+.+
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 45566677888999998776654
No 20
>PRK10746 putative transport protein YifK; Provisional
Probab=71.45 E-value=1.1e+02 Score=35.24 Aligned_cols=29 Identities=24% Similarity=0.156 Sum_probs=21.5
Q ss_pred ccHHHHHHHHhhhcceeecccCcchhHHHhhhcCC
Q 004023 55 VKWSVILQLAFQSIGVVYGDIGTSPLYVYASTFTN 89 (778)
Q Consensus 55 ~~~~~~l~La~qslGVVyGDIGTSPLYv~~~~f~~ 89 (778)
.+.+....+++++. |||.-+..-+..+..
T Consensus 12 L~~~~~~~i~ig~~------IGtGlf~~~g~~l~~ 40 (461)
T PRK10746 12 LEARHIELIALGGT------IGVGLFMGAASTLKW 40 (461)
T ss_pred CcHHHHHHHHHHhh------hhhhHHHHhHHHHHh
Confidence 66777777777665 999988888777754
No 21
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=67.82 E-value=2.3e+02 Score=32.52 Aligned_cols=45 Identities=9% Similarity=-0.162 Sum_probs=28.9
Q ss_pred cccccchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcce
Q 004023 369 SIPHSLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPRV 413 (778)
Q Consensus 369 siP~~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrv 413 (778)
...++..+.+.+.+.++.+-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 334555555555555555556666666666666777788999964
No 22
>PRK10249 phenylalanine transporter; Provisional
Probab=65.71 E-value=1.3e+02 Score=34.55 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhhhcccccccc---hhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHH--HhhcChhH-HHhh
Q 004023 234 VSVAIIVLLFMVQRFGTDKVGYS---FAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDY--FTRNKKDA-WISL 307 (778)
Q Consensus 234 is~~ILv~LF~iQ~~GT~kVg~~---F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~f--f~~~g~~~-~~~L 307 (778)
++.++++++..+.-+|....|.+ +.=+-++..+.+.++|++-+...++.- ..++.+..+. +..+|..+ +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 45666777778888888766642 232333444444455555433221110 1122111100 01234444 4567
Q ss_pred hhhhhhhcccccc--cccCCCCCccceeeehhh
Q 004023 308 GGVVLAITGTEAL--FADVGHFTVQSIQLSMCT 338 (778)
Q Consensus 308 G~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~~ 338 (778)
..++.+.+|-|.. .|+=-+-.+|.|-.+-..
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~ 248 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQ 248 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHH
Confidence 7778889999865 555556666766655443
No 23
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=64.24 E-value=1.3e+02 Score=33.97 Aligned_cols=24 Identities=4% Similarity=0.207 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHhhhcccccccc
Q 004023 233 WVSVAIIVLLFMVQRFGTDKVGYS 256 (778)
Q Consensus 233 ~is~~ILv~LF~iQ~~GT~kVg~~ 256 (778)
.+++++++.+..+.-+|+...+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666777778888898777664
No 24
>PRK11021 putative transporter; Provisional
Probab=56.49 E-value=3.3e+02 Score=30.53 Aligned_cols=99 Identities=12% Similarity=0.122 Sum_probs=49.3
Q ss_pred eehhHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHhhhhhhcc-ccCcceeeecChHHHHHHHhhcChhHH-Hhhh
Q 004023 231 VVWVSVAIIVLLFMVQRFGTDKVGYSFAPIICVWFSLIGGIGIYNFI-KYDPSVIKAINPKYIVDYFTRNKKDAW-ISLG 308 (778)
Q Consensus 231 Vv~is~~ILv~LF~iQ~~GT~kVg~~F~PImllWF~~i~~iGiyni~-~~~p~Vl~A~nP~y~~~ff~~~g~~~~-~~LG 308 (778)
...+++++++.+..+.-+|....+++-.=+. . +.+..+++.-.. +.++.-+ .+++ +..++..+| ..+.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 184 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQTVIA--L-LIVALVVAIWWAGDIKPADI-PFPA------PGSIEWSGLFAALG 184 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH--H-HHHHHHHHHHHHcCCchhcC-CCCC------CCCccHHHHHHHHH
Confidence 3567788888889999999887776432111 1 112222221111 1122211 1110 011222332 3355
Q ss_pred hhhhhhcccccc--cccCCCCCccceeeehhhh
Q 004023 309 GVVLAITGTEAL--FADVGHFTVQSIQLSMCTV 339 (778)
Q Consensus 309 ~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~~~ 339 (778)
..+.+.+|-|+. +|+==+-.+|.|..|-..-
T Consensus 185 ~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~~ 217 (410)
T PRK11021 185 VMFWCFVGIEAFAHLASEFKNPERDFPRALMIG 217 (410)
T ss_pred HHHHHHhcHHHHHhhHHhccCccccccHHHHHH
Confidence 567788888854 4444455667776665543
No 25
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=55.49 E-value=3.6e+02 Score=31.05 Aligned_cols=25 Identities=16% Similarity=0.319 Sum_probs=18.1
Q ss_pred eehhHHHHHHHHHHHhhhccccccc
Q 004023 231 VVWVSVAIIVLLFMVQRFGTDKVGY 255 (778)
Q Consensus 231 Vv~is~~ILv~LF~iQ~~GT~kVg~ 255 (778)
...+++++++++..+.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 4566677777788888899866554
No 26
>PRK11387 S-methylmethionine transporter; Provisional
Probab=54.60 E-value=2.1e+02 Score=32.85 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=19.0
Q ss_pred HHhhhhhhhhhcccccc--cccCCCCCccceeeehh
Q 004023 304 WISLGGVVLAITGTEAL--FADVGHFTVQSIQLSMC 337 (778)
Q Consensus 304 ~~~LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~ 337 (778)
+..+..++.+.+|-|.. .|+==+-.+|.|-.|-.
T Consensus 209 ~~~~~~~~faf~G~e~~~~~a~E~knP~r~iPrAi~ 244 (471)
T PRK11387 209 LMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIR 244 (471)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHhcChhhHHHHHHH
Confidence 34455567778887753 33333455566666543
No 27
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=53.95 E-value=83 Score=35.65 Aligned_cols=100 Identities=10% Similarity=0.149 Sum_probs=47.1
Q ss_pred ehhHHHHHHHHHHHhhhcccccc---cchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHhhcC-hhHH-Hh
Q 004023 232 VWVSVAIIVLLFMVQRFGTDKVG---YSFAPIICVWFSLIGGIGIYNFIKYDPSVIKAINPKYIVDYFTRNK-KDAW-IS 306 (778)
Q Consensus 232 v~is~~ILv~LF~iQ~~GT~kVg---~~F~PImllWF~~i~~iGiyni~~~~p~Vl~A~nP~y~~~ff~~~g-~~~~-~~ 306 (778)
..+.+++++++..+.-+|....+ ..+.=+.++=++.+.++|++.+.. +-+..-.|.. ....+ ..+| ..
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~~~---~~~~~~~~~~----~~~~g~~~~~~~~ 200 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKA---ENFAAPTTTA----IGATGSFMALLAG 200 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---ccccCCCccc----ccccchHHHHHHH
Confidence 34566677777788888875433 333333333344455556654322 1111111100 00011 1111 23
Q ss_pred hhhhhhhhcccccc--cccCCCCCccceeeehhh
Q 004023 307 LGGVVLAITGTEAL--FADVGHFTVQSIQLSMCT 338 (778)
Q Consensus 307 LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~~ 338 (778)
+...+.+.+|-|+. +|+=-+-.+|.|-.|-..
T Consensus 201 ~~~~~~af~G~e~~~~~a~E~k~P~r~iP~Ai~~ 234 (445)
T PRK11357 201 ISATSWSYTGMASICYMTGEIKNPGKTMPRALIG 234 (445)
T ss_pred HHHHHHHHhhHHHHHhhHHHhcCccccchHHHHH
Confidence 44567778887753 333345556666555443
No 28
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=53.52 E-value=1.5e+02 Score=32.30 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=38.8
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHhhh
Q 004023 454 NAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLVIAYVLVIMS----VELGYLSSVL 505 (778)
Q Consensus 454 ~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~~~f~~~F~~----ie~~f~sa~l 505 (778)
..||-+|..+.++.++-++..+..+.+.+++.+++|.++++. +|-..+|+.-
T Consensus 16 ~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~ 71 (301)
T PF14362_consen 16 AGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIR 71 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 468889999999999988888888888887777777665554 5555555443
No 29
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=52.31 E-value=1.2e+02 Score=34.37 Aligned_cols=23 Identities=9% Similarity=0.277 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHHhhhccccccc
Q 004023 233 WVSVAIIVLLFMVQRFGTDKVGY 255 (778)
Q Consensus 233 ~is~~ILv~LF~iQ~~GT~kVg~ 255 (778)
.+.+++++++..+.-+|+...++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHH
Confidence 35566667778888889866654
No 30
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=50.00 E-value=3.5e+02 Score=31.68 Aligned_cols=57 Identities=18% Similarity=0.113 Sum_probs=32.0
Q ss_pred HHHhhhhhhhhhcccccc--cccCCCCCccceeeehhhhHHHHHHHhhccchhhhccCC
Q 004023 303 AWISLGGVVLAITGTEAL--FADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLRKHS 359 (778)
Q Consensus 303 ~~~~LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~~~p 359 (778)
.+..+-+++.+.+|-|+. .|+==+-.+|.+-.|-...+.=+.++.++|--++...-|
T Consensus 196 ~~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i~~~~p 254 (507)
T TIGR00910 196 TLVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSIAAVIP 254 (507)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence 455555677788998865 455445566666666555444444444444434333333
No 31
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=47.14 E-value=5e+02 Score=29.87 Aligned_cols=24 Identities=4% Similarity=0.195 Sum_probs=17.2
Q ss_pred ehhHHHHHHHHHHHhhhccccccc
Q 004023 232 VWVSVAIIVLLFMVQRFGTDKVGY 255 (778)
Q Consensus 232 v~is~~ILv~LF~iQ~~GT~kVg~ 255 (778)
..++++++++++.+..+|+...++
T Consensus 130 ~~~~~~~~~~~~~ln~~Gi~~~~~ 153 (473)
T TIGR00905 130 ILGASVLLWVFTFLVLRGVRQAAF 153 (473)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHH
Confidence 345666667778899999976654
No 32
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=46.86 E-value=77 Score=32.77 Aligned_cols=21 Identities=0% Similarity=0.219 Sum_probs=16.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHH
Q 004023 511 GGYLPLAFAAVLMTIMYIWNN 531 (778)
Q Consensus 511 GGW~pl~ia~v~~~iM~~W~~ 531 (778)
.+|.-+++|++.+.+-+-|+.
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 489999999998888766543
No 33
>PRK10580 proY putative proline-specific permease; Provisional
Probab=44.57 E-value=3e+02 Score=31.42 Aligned_cols=99 Identities=18% Similarity=0.168 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhh----hccc-cCcceee-ecChHHHHHHHhhcChhH-H
Q 004023 235 SVAIIVLLFMVQRFGTDKVGY---SFAPIICVWFSLIGGIGIY----NFIK-YDPSVIK-AINPKYIVDYFTRNKKDA-W 304 (778)
Q Consensus 235 s~~ILv~LF~iQ~~GT~kVg~---~F~PImllWF~~i~~iGiy----ni~~-~~p~Vl~-A~nP~y~~~ff~~~g~~~-~ 304 (778)
.++++++++.++-+|+...+. .+.-+.++-++.+.++|+. +... .+|.-.+ .+++- .++ .+|..+ +
T Consensus 127 ~~~~~~l~~~ln~~gv~~~~~~~~~~~~~~~~~l~~~ii~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~-~~g~~~~~ 202 (457)
T PRK10580 127 VLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGGQPTGIHNLWSNG---GFF-SNGWLGMV 202 (457)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccCCCC---CCC-CcchHHHH
Confidence 445566778889999765554 4444444444444344432 1111 0111010 01000 011 223323 3
Q ss_pred Hhhhhhhhhhcccccc--cccCCCCCccceeeehh
Q 004023 305 ISLGGVVLAITGTEAL--FADVGHFTVQSIQLSMC 337 (778)
Q Consensus 305 ~~LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~ 337 (778)
..+..++.+.+|-|+. .|.=-+-.+|.|-.|-.
T Consensus 203 ~~~~~~~fsf~G~e~~~~~a~E~knP~k~iPrAi~ 237 (457)
T PRK10580 203 MSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAIN 237 (457)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHhcChhhHHHHHHH
Confidence 4566778888998865 33444566666666654
No 34
>PRK10238 aromatic amino acid transporter; Provisional
Probab=44.32 E-value=3.7e+02 Score=30.85 Aligned_cols=113 Identities=14% Similarity=0.158 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhhhccccccc---chhhHHHHHHHHHHhhhhhhcccc--Ccc-eeeecChHHHHHHHhhcChhHH-Hh
Q 004023 234 VSVAIIVLLFMVQRFGTDKVGY---SFAPIICVWFSLIGGIGIYNFIKY--DPS-VIKAINPKYIVDYFTRNKKDAW-IS 306 (778)
Q Consensus 234 is~~ILv~LF~iQ~~GT~kVg~---~F~PImllWF~~i~~iGiyni~~~--~p~-Vl~A~nP~y~~~ff~~~g~~~~-~~ 306 (778)
..++++++++.+.-+|+...|. .+.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..+|..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566777888888766554 223333332333333344322211 121 11111000 00111233332 34
Q ss_pred hhhhhhhhccccc--ccccCCCCCccceeeehhhhHHHHHHHhhcc
Q 004023 307 LGGVVLAITGTEA--LFADVGHFTVQSIQLSMCTVTYPALILAYMG 350 (778)
Q Consensus 307 LG~v~L~iTG~EA--lfADlGHF~~~~Iq~a~~~~v~P~LlL~Y~G 350 (778)
++.++.+.+|-|+ ..|.=-+-.+|.+-.|-.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 6667888899887 4455456667777777643 23444455554
No 35
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=44.16 E-value=5.5e+02 Score=29.53 Aligned_cols=108 Identities=14% Similarity=0.076 Sum_probs=48.8
Q ss_pred HHhhhhhhhhhcccccc--cccCCCCCccceeeehhhhHHHHHHHhhccchhhhc--cCCccc---ccccccc----ccc
Q 004023 304 WISLGGVVLAITGTEAL--FADVGHFTVQSIQLSMCTVTYPALILAYMGQASFLR--KHSELV---SETFYKS----IPH 372 (778)
Q Consensus 304 ~~~LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA~L~--~~p~~~---~n~Fy~s----iP~ 372 (778)
+..+..++.+.+|-|+. .|.==+-.+|.|-.+-.. +.-...+.|+-....+. ..+++. ++||-.. --+
T Consensus 214 ~~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 292 (469)
T PRK11049 214 FAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLP 292 (469)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCCh
Confidence 34555667778888854 333335566776666632 22233344443333221 122222 2454221 111
Q ss_pred cchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHhCCCcc
Q 004023 373 SLYWPMFIVAVMAAIIASQAMISGTFSIVQQSISLGCFPR 412 (778)
Q Consensus 373 ~~~wP~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPr 412 (778)
+...-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 293 ~~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 293 AAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 2222222223333333334444444444445557899996
No 36
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=38.86 E-value=2.4e+02 Score=32.23 Aligned_cols=33 Identities=18% Similarity=0.092 Sum_probs=19.2
Q ss_pred hhhhhhhhhcccccc--cccCCCCCccceeeehhh
Q 004023 306 SLGGVVLAITGTEAL--FADVGHFTVQSIQLSMCT 338 (778)
Q Consensus 306 ~LG~v~L~iTG~EAl--fADlGHF~~~~Iq~a~~~ 338 (778)
.+..++.+.+|-|+. .|+==+-.+|.|-.+-..
T Consensus 202 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~ 236 (478)
T TIGR00913 202 VFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKR 236 (478)
T ss_pred HHHHHHhhhccHHHHHHHHHhhcChhhHHHHHHHH
Confidence 344456777888753 444445566666666443
No 37
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=37.73 E-value=32 Score=36.79 Aligned_cols=31 Identities=26% Similarity=0.495 Sum_probs=26.0
Q ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 004023 507 KFDQGGYLPLAFAAVLMTIMYIWNNVYRRKY 537 (778)
Q Consensus 507 K~~~GGW~pl~ia~v~~~iM~~W~~G~~~~~ 537 (778)
|=.+|||..++++++...+..+|++--+.+-
T Consensus 257 ~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 257 VSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred cccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 3458999999999999999999998655543
No 38
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=36.34 E-value=31 Score=39.44 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=25.0
Q ss_pred HHHhhhhhhhhhcccc--cccccCCCCCccceeeehhh
Q 004023 303 AWISLGGVVLAITGTE--ALFADVGHFTVQSIQLSMCT 338 (778)
Q Consensus 303 ~~~~LG~v~L~iTG~E--AlfADlGHF~~~~Iq~a~~~ 338 (778)
-|..+.-++.+.+|-| +.+|+==.=.+|+|..|-..
T Consensus 202 ~~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 202 FFAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred HHHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 4677888889999999 45666556666677655444
No 39
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=34.35 E-value=35 Score=39.65 Aligned_cols=91 Identities=19% Similarity=0.311 Sum_probs=58.1
Q ss_pred HHhCCCcceeEEecCCccCC----ceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhHHHHHHHHHHHHHHHH----
Q 004023 405 ISLGCFPRVKVVHTSAKYEG----QVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMI---- 476 (778)
Q Consensus 405 ~~Lg~fPrvkIvHTS~~~~G----QIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vM~iTT~L~~~v~~---- 476 (778)
.+-|-.||+-+...=++..| |+|+|.+= +..+-=|.--=|.++-.+=-.+++++|..+||++...=.-
T Consensus 224 ~sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrv 299 (459)
T KOG3643|consen 224 FSTGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRV 299 (459)
T ss_pred EccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCc
Confidence 34789999999888888777 99999852 1111112222345555556778899999999987554211
Q ss_pred -HHHhhhhHHHHHHHHHHHH-HHHH
Q 004023 477 -MIWKSNIFLVIAYVLVIMS-VELG 499 (778)
Q Consensus 477 -~vw~~~~~~~~~f~~~F~~-ie~~ 499 (778)
.|.-.-+.+..+|..+|++ +|-+
T Consensus 300 SYVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 300 SYVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred cceeeehhhhhHHHHHHHHHHHHHH
Confidence 2233445666777777776 4544
No 40
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=32.01 E-value=15 Score=40.47 Aligned_cols=60 Identities=15% Similarity=0.380 Sum_probs=0.0
Q ss_pred HHHHHh--hhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHH---HHHHHHHHHHHHHHHHHH
Q 004023 475 MIMIWK--SNIFLVIAYVLVIMSVELGYLSSVLYKFDQGGYLPLAFA---AVLMTIMYIWNNVYRRKY 537 (778)
Q Consensus 475 ~~~vw~--~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pl~ia---~v~~~iM~~W~~G~~~~~ 537 (778)
|.+.|+ .++|-.++|++.|+.-=++...|++. |=+||++++- .++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 445555 47888888988887766666666654 6689999865 467777889999887664
No 41
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=30.80 E-value=26 Score=38.99 Aligned_cols=85 Identities=26% Similarity=0.376 Sum_probs=52.5
Q ss_pred ehhHHHHHHHHHHHhhhcccccccchhhHH--HHHHHHHH-hhh-hhhccccCcceeeecChHHHHHHHhhcChhHHHhh
Q 004023 232 VWVSVAIIVLLFMVQRFGTDKVGYSFAPII--CVWFSLIG-GIG-IYNFIKYDPSVIKAINPKYIVDYFTRNKKDAWISL 307 (778)
Q Consensus 232 v~is~~ILv~LF~iQ~~GT~kVg~~F~PIm--llWF~~i~-~iG-iyni~~~~p~Vl~A~nP~y~~~ff~~~g~~~~~~L 307 (778)
+.+.+..+..+|++|-.+... |.. .+||+..- -+- ..-++||-|.+ +.=+.|....|| +.
T Consensus 234 ialgil~i~~~f~~~~~~va~------~~~~~wL~f~~~~syiKl~mTliKYiPQa---------~mN~tRKSt~gw-sI 297 (372)
T KOG3145|consen 234 IALGILAIFWLFAVVFMYVAY------WYVIRWLAFLNNLSYIKLAMTLIKYIPQA---------YMNFTRKSTVGW-SI 297 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHHHhhhHH---------hhcceecccccc-cc
Confidence 344445556678888766543 333 44554332 111 12456774432 233456667888 78
Q ss_pred hhhhhhhccccc-----------------ccccCCCCCccce
Q 004023 308 GGVVLAITGTEA-----------------LFADVGHFTVQSI 332 (778)
Q Consensus 308 G~v~L~iTG~EA-----------------lfADlGHF~~~~I 332 (778)
|+|+|=+|||-| .|+|.|-||-.=+
T Consensus 298 gnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~v 339 (372)
T KOG3145|consen 298 GNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLV 339 (372)
T ss_pred ccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhH
Confidence 999999999965 6899999986543
No 42
>PHA02749 hypothetical protein; Provisional
Probab=28.31 E-value=79 Score=34.05 Aligned_cols=146 Identities=22% Similarity=0.354 Sum_probs=92.5
Q ss_pred HHHhhhhhhccccCcceeeec-ChHHHHHHHhhcChhHHHhhhhhhhhhcccccccccCCCCCccceeeehhhhHHHHHH
Q 004023 267 LIGGIGIYNFIKYDPSVIKAI-NPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADVGHFTVQSIQLSMCTVTYPALI 345 (778)
Q Consensus 267 ~i~~iGiyni~~~~p~Vl~A~-nP~y~~~ff~~~g~~~~~~LG~v~L~iTG~EAlfADlGHF~~~~Iq~a~~~~v~P~Ll 345 (778)
+++.+|+ ||..|+|++-..+ -|.+.+. .+|...||.+|-+-=.-.-=-+-|-...+..-+.-++=.+-.|+
T Consensus 128 si~al~l-nila~~pei~a~~hfplhlia-------gaf~ai~~lllp~iivltyr~~~~~ip~~~~il~~~~na~a~li 199 (322)
T PHA02749 128 SIAALGL-NILAWHPEISAGFHFPLHLIA-------GAFIAIAGLLLPIIIVLTYRGEAGGIPPGRDILMLLFNAFAMLI 199 (322)
T ss_pred HHHHhhh-HHHHhchhhhccccCchHHhh-------hHHHHHHHHhhhheEEEeeccccCCCCCcchhHHHHHHHHHHHH
Confidence 5667775 7888999998887 4665554 56788888777543211111123444444444555666788888
Q ss_pred HhhccchhhhccCCcc----ccccccccccccchHHHHHHHHHHHHHHHhHH-hhhhhHHHHHHHHhCCCcceeEEecCC
Q 004023 346 LAYMGQASFLRKHSEL----VSETFYKSIPHSLYWPMFIVAVMAAIIASQAM-ISGTFSIVQQSISLGCFPRVKVVHTSA 420 (778)
Q Consensus 346 L~Y~GQaA~L~~~p~~----~~n~Fy~siP~~~~wP~~vlAtlAaIIASQA~-ISg~FSii~Qa~~Lg~fPrvkIvHTS~ 420 (778)
-.|+=--|.---|-+. +..+|-.+.|+-+ --+++=|..|-|..|||= .-+.|.+...|
T Consensus 200 asy~lsdal~qihi~e~qlgi~st~laslpdfi-~~~iiral~a~il~seagd~e~m~tm~aaa---------------- 262 (322)
T PHA02749 200 ASYFLSDALAQIHIAEQQLGITSTFLASLPDFI-TAFIIRALFAEILGSEAGDQEAMATMFAAA---------------- 262 (322)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhchHHH-HHHHHHHHHHHHhccccccHHHHHHHHHHH----------------
Confidence 8887655544444332 5678999999854 346677888999999873 12223333322
Q ss_pred ccCCceeechhHHHHHHH
Q 004023 421 KYEGQVYIPEINYLLMIA 438 (778)
Q Consensus 421 ~~~GQIYIP~vNw~Lmi~ 438 (778)
.+.|+-||.+--+||=.
T Consensus 263 -vhdqlsip~lil~l~p~ 279 (322)
T PHA02749 263 -VHDQLSIPALILLLAPA 279 (322)
T ss_pred -hhhccccHHHHHHHhHH
Confidence 56788999876665543
No 43
>PRK11492 hyfE hydrogenase 4 membrane subunit; Provisional
Probab=23.11 E-value=9.2e+02 Score=25.62 Aligned_cols=133 Identities=14% Similarity=0.184 Sum_probs=71.5
Q ss_pred hCCCcceeEEecCCccCCceeechhHHHHHHHhheeEEeecCcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 004023 407 LGCFPRVKVVHTSAKYEGQVYIPEINYLLMIACVCVTVGFRTTEKIGNAYGIAVVFVMTLTSTLLVLIMIMIWKSNIFLV 486 (778)
Q Consensus 407 Lg~fPrvkIvHTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~vM~iTT~L~~~v~~~vw~~~~~~~ 486 (778)
.....|+++.+--+...|..+-+.+.-.+.+.|..++.-+....+...-+.++++.+++...++.. .. |+|.+..
T Consensus 77 ~r~~~k~~~~re~~p~i~~~~s~ll~~~~~i~s~~~~~~i~~~~~~~~~~~l~~a~~lf~iGl~~~----i~-Rrn~i~~ 151 (216)
T PRK11492 77 TYAARKLGDNIEEEPVFGPAMSILLAALIVLLCAFVVQPVKLPMALGLKPALAVSLGHFLLGLLCI----VS-QRNILKQ 151 (216)
T ss_pred HHHHHHhCCccccccccchHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHH----HH-HhHHHHH
Confidence 344567777656666677777777777777777777665554444444455666666555554432 22 4444333
Q ss_pred -HHHHHHHHHHHHHHHHhhhhccc---C-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHH
Q 004023 487 -IAYVLVIMSVELGYLSSVLYKFD---Q-GGYLPLAFAAVLMTIMYIWNNVYRRKYYFELEHKISPERVKEI 553 (778)
Q Consensus 487 -~~f~~~F~~ie~~f~sa~l~K~~---~-GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~~ 553 (778)
+.+...--.+-+.+.+ .....| | |--+-.+++.+++.+.. ..-++..+.++.|++.++
T Consensus 152 iig~~~meNgv~L~~~~-~~~~~p~~VE~g~~~d~l~av~i~~i~a--------~~i~r~~~sid~~~l~~L 214 (216)
T PRK11492 152 IFGYCLMENGSHLTLAL-LAYNAPELVEIGIATDAIFAVIIMVLLA--------RKIYRTHGTLDVNKLTAL 214 (216)
T ss_pred HHHHHHHHHHHHHHHHH-HHhhcchhhhccccccHHHHHHHHHHHH--------HHHHHhcCCCcHHHHHhc
Confidence 2222222222222222 112222 1 44566777888777777 222344567777776553
No 44
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=23.06 E-value=4.6e+02 Score=23.97 Aligned_cols=18 Identities=28% Similarity=0.558 Sum_probs=12.9
Q ss_pred HHHHhhhhcccCCCcHHHH
Q 004023 499 GYLSSVLYKFDQGGYLPLA 517 (778)
Q Consensus 499 ~f~sa~l~K~~~GGW~pl~ 517 (778)
.+|...|..+.=||| |+-
T Consensus 30 ~lfa~~Ln~~~~~Gf-Plg 47 (81)
T PF13937_consen 30 ILFADELNQITFGGF-PLG 47 (81)
T ss_pred HHHHHHHcCCeeCCC-ChH
Confidence 567778888877887 553
No 45
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=21.75 E-value=1e+02 Score=29.02 Aligned_cols=29 Identities=14% Similarity=0.350 Sum_probs=22.4
Q ss_pred ceEEEEEecCCCCCEEEEEEEeecccCCC
Q 004023 611 ERFLFRRVEPRELNVFRCVARYGYTDARN 639 (778)
Q Consensus 611 ERflv~~v~~~~~~~yRcv~RYGY~D~~~ 639 (778)
--+.+..+...+.|.|+|.+.+|.-|..+
T Consensus 74 asL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 74 ATLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred cEEEEeecccccCEEEEEEEecCCCCcee
Confidence 33455667777889999999999887654
No 46
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=21.65 E-value=40 Score=37.18 Aligned_cols=35 Identities=31% Similarity=0.220 Sum_probs=26.4
Q ss_pred cCCCCCccceeeehhhhHHHHHHHhhccchh--hhccCCcccc
Q 004023 323 DVGHFTVQSIQLSMCTVTYPALILAYMGQAS--FLRKHSELVS 363 (778)
Q Consensus 323 DlGHF~~~~Iq~a~~~~v~P~LlL~Y~GQaA--~L~~~p~~~~ 363 (778)
+=++|||.+|||+|-.--=+| ||+- =|++|||-+.
T Consensus 171 gk~Y~GRG~iQlsWNyNYG~a------g~alg~dLL~~Pe~V~ 207 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNYNYGAA------GKALGLDLLRNPELVA 207 (286)
T ss_pred CCcccccCcccccccccccHh------HhhcCchhhcCcchhc
Confidence 457999999999998853333 5543 6889999876
No 47
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.83 E-value=3.7e+02 Score=31.76 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=14.2
Q ss_pred hhhhhhhhHHHHHHHHHHH
Q 004023 453 GNAYGIAVVFVMTLTSTLL 471 (778)
Q Consensus 453 ~~AYGiaV~~vM~iTT~L~ 471 (778)
-..||++++..+++...+.
T Consensus 23 I~~YGl~ialGil~a~~l~ 41 (460)
T PRK13108 23 VRAYAVCVITGIIVALLIG 41 (460)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3789999888888765544
No 48
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=20.41 E-value=3.1e+02 Score=28.99 Aligned_cols=47 Identities=26% Similarity=0.410 Sum_probs=31.9
Q ss_pred HHHHHHHhheeEEeecCcchhhhhh--hhhhHHHHHHHHHHHHHHHHHH
Q 004023 432 NYLLMIACVCVTVGFRTTEKIGNAY--GIAVVFVMTLTSTLLVLIMIMI 478 (778)
Q Consensus 432 Nw~Lmi~~i~vv~~F~~s~~l~~AY--GiaV~~vM~iTT~L~~~v~~~v 478 (778)
|-..+.-.+.++-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444455555566677777766 6788899999998888776554
Done!